Pipette Biological Data In and Out of R

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Documentation for package ‘pipette’ version 0.5.15

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as.data.frame Coercion methods
as.data.frame-method Coercion methods
as.data.table Coercion methods
as.data.table.DataFrame Coercion methods
as.data.table.GenomicRanges Coercion methods
as.data.table.IRanges Coercion methods
as.DataFrame Coercion methods
as.DataFrame-method Coercion methods
assignAndSaveData Assign and save data
as_tibble Coercion methods
as_tibble.DataFrame Coercion methods
as_tibble.GenomicRanges Coercion methods
as_tibble.IRanges Coercion methods
atomize Atomize
atomize-method Atomize
cacheURL Download and cache a file using BiocFileCache
checksums Generate checksum from file
coerce Coercion methods
coerce-method Coercion methods
decode Decode column data that uses run-length encoding
decode-method Decode column data that uses run-length encoding
droplevels Drop unused levels from factors
droplevels-method Drop unused levels from factors
encode Encode using run-length encoding
encode-method Encode using run-length encoding
export Export
export-method Export
factorize Factorize
factorize-method Factorize
getJSON Get JSON from an API
getURLDirList Get remote URL directory listing
import Import
loadData Load data
loadDataAsName Load data as name
loadRemoteData Load remote data
localOrRemoteFile Dynamically handle a local or remote file path
matchRownameColumn Match row name column
matchRownameColumn-method Match row name column
md5 Generate checksum from file
metadata2 Metadata
metadata2-method Metadata
metadata2<- Metadata
metadata2<--method Metadata
naStrings NA strings
removeNA Remove rows and columns containing only NA values
removeNA-method Remove rows and columns containing only NA values
sanitizeNA Sanitize NA values
sanitizeNA-method Sanitize NA values
sanitizePercent Sanitize percentage
sanitizePercent-method Sanitize percentage
saveData Save data
sha256 Generate checksum from file
transmit Transmit files from a remote FTP server