calcGCD                 Graphlet Correlation Distance (GCD)
calcGCM                 Graphlet Correlation Matrix (GCM)
cclasso                 CCLasso: Correlation inference of Composition
                        data through Lasso method
colToTransp             Adding transparency to a color
createAssoPerm          Create and store association matrices for
                        permuted data
diffnet                 Constructing Differential Networks for
                        Microbiome Data
editLabels              Edit labels
gcoda                   gCoda: conditional dependence network inference
                        for compositional data
installNetCoMiPacks     Install all packages used within NetCoMi
multAdjust              Multiple testing adjustment
netAnalyze              Microbiome Network Analysis
netCompare              Group Comparison of Network Properties
netConstruct            Constructing Networks for Microbiome Data
plot.diffnet            Plot method for objects of class diffnet
plot.microNetProps      Plot Method for microNetProps Objects
plotHeat                Create a heatmap with p-values
print.GCD               Print method for GCD objects
renameTaxa              Rename taxa
summary.microNetComp    Summary Method for Objects of Class
                        microNetComp
summary.microNetProps   Summary Method for Objects of Class
                        microNetProps
testGCM                 Test GCM(s) for statistical significance
