bin/pneumo-typer
bin/update_mlstdb_cgmlstdb
share/pneumo-typer/DATABASE/CPS_workplace/id_list
share/pneumo-typer/DATABASE/CPS_workplace/seq_file.fasta
share/pneumo-typer/DATABASE/filter_pseudogene.txt
share/pneumo-typer/DATABASE/gene.txt
share/pneumo-typer/DATABASE/serotype_matrix.txt
share/pneumo-typer/README.md
share/pneumo-typer/ST_tool/._RESTful_API_download_pubmlst.pl
share/pneumo-typer/ST_tool/._ST_profile.pl
share/pneumo-typer/ST_tool/._access_token
share/pneumo-typer/ST_tool/._bacth_blat.pl
share/pneumo-typer/ST_tool/._gene_bacth_extract.pl
share/pneumo-typer/ST_tool/._lib
share/pneumo-typer/ST_tool/RESTful_API_download_pubmlst.pl
share/pneumo-typer/ST_tool/ST_profile.pl
share/pneumo-typer/ST_tool/ST_profile_cg.pl
share/pneumo-typer/ST_tool/access_token
share/pneumo-typer/ST_tool/bacth_blast.pl
share/pneumo-typer/ST_tool/bacth_blat.pl
share/pneumo-typer/ST_tool/database/Update_time.txt
share/pneumo-typer/ST_tool/database/cgmlst/._cgMLSA_loci.name
share/pneumo-typer/ST_tool/database/cgmlst/cgMLSA_loci.name
share/pneumo-typer/ST_tool/database/cgmlst/cgMLSA_loci/SPNE00213.fas
share/pneumo-typer/ST_tool/database/cgmlst/cgMLSA_loci/cgMLSA_loci.fas
share/pneumo-typer/ST_tool/database/cgmlst/cgMLST_profiles
share/pneumo-typer/ST_tool/database/cgmlst_list.txt
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/aroE.fas
share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/ddl.fas
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share/pneumo-typer/ST_tool/database/mlst/MLSA_senven_loci/xpt.fas
share/pneumo-typer/ST_tool/database/mlst/MLST_profiles
share/pneumo-typer/ST_tool/database/mlst_list.txt
share/pneumo-typer/ST_tool/gene_bacth_extract.pl
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share/pneumo-typer/ST_tool/lib/._HTTP
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share/pneumo-typer/ST_tool/lib/Chi/._Link
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share/pneumo-typer/ST_tool/lib/Chi/IPC/Pipe.pm
share/pneumo-typer/ST_tool/lib/Chi/Link.pm
share/pneumo-typer/ST_tool/lib/Chi/Link/._IPC
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share/pneumo-typer/ST_tool/lib/HTTP/._Config.pm
share/pneumo-typer/ST_tool/lib/HTTP/._Cookies
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share/pneumo-typer/ST_tool/lib/HTTP/._Status.pm
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share/pneumo-typer/ST_tool/lib/HTTP/Headers/._ETag.pm
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share/pneumo-typer/ST_tool/lib/HTTP/Status.pm
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share/pneumo-typer/ST_tool/lib/URI/_segment.pm
share/pneumo-typer/ST_tool/lib/URI/_server.pm
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share/pneumo-typer/ST_tool/lib/URI/data.pm
share/pneumo-typer/ST_tool/lib/URI/file.pm
share/pneumo-typer/ST_tool/lib/URI/file/._Base.pm
share/pneumo-typer/ST_tool/lib/URI/file/._FAT.pm
share/pneumo-typer/ST_tool/lib/URI/file/._Mac.pm
share/pneumo-typer/ST_tool/lib/URI/file/._OS2.pm
share/pneumo-typer/ST_tool/lib/URI/file/._QNX.pm
share/pneumo-typer/ST_tool/lib/URI/file/._Unix.pm
share/pneumo-typer/ST_tool/lib/URI/file/._Win32.pm
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share/pneumo-typer/ST_tool/lib/URI/file/FAT.pm
share/pneumo-typer/ST_tool/lib/URI/file/Mac.pm
share/pneumo-typer/ST_tool/lib/URI/file/OS2.pm
share/pneumo-typer/ST_tool/lib/URI/file/QNX.pm
share/pneumo-typer/ST_tool/lib/URI/file/Unix.pm
share/pneumo-typer/ST_tool/lib/URI/file/Win32.pm
share/pneumo-typer/ST_tool/lib/URI/ftp.pm
share/pneumo-typer/ST_tool/lib/URI/ftpes.pm
share/pneumo-typer/ST_tool/lib/URI/ftps.pm
share/pneumo-typer/ST_tool/lib/URI/geo.pm
share/pneumo-typer/ST_tool/lib/URI/gopher.pm
share/pneumo-typer/ST_tool/lib/URI/http.pm
share/pneumo-typer/ST_tool/lib/URI/https.pm
share/pneumo-typer/ST_tool/lib/URI/icap.pm
share/pneumo-typer/ST_tool/lib/URI/icaps.pm
share/pneumo-typer/ST_tool/lib/URI/irc.pm
share/pneumo-typer/ST_tool/lib/URI/ircs.pm
share/pneumo-typer/ST_tool/lib/URI/ldap.pm
share/pneumo-typer/ST_tool/lib/URI/ldapi.pm
share/pneumo-typer/ST_tool/lib/URI/ldaps.pm
share/pneumo-typer/ST_tool/lib/URI/mailto.pm
share/pneumo-typer/ST_tool/lib/URI/mms.pm
share/pneumo-typer/ST_tool/lib/URI/news.pm
share/pneumo-typer/ST_tool/lib/URI/nntp.pm
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share/pneumo-typer/ST_tool/lib/URI/otpauth.pm
share/pneumo-typer/ST_tool/lib/URI/pop.pm
share/pneumo-typer/ST_tool/lib/URI/rlogin.pm
share/pneumo-typer/ST_tool/lib/URI/rsync.pm
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share/pneumo-typer/ST_tool/lib/URI/rtspu.pm
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share/pneumo-typer/ST_tool/lib/URI/sftp.pm
share/pneumo-typer/ST_tool/lib/URI/sip.pm
share/pneumo-typer/ST_tool/lib/URI/sips.pm
share/pneumo-typer/ST_tool/lib/URI/snews.pm
share/pneumo-typer/ST_tool/lib/URI/ssh.pm
share/pneumo-typer/ST_tool/lib/URI/telnet.pm
share/pneumo-typer/ST_tool/lib/URI/tn3270.pm
share/pneumo-typer/ST_tool/lib/URI/urn.pm
share/pneumo-typer/ST_tool/lib/URI/urn/._isbn.pm
share/pneumo-typer/ST_tool/lib/URI/urn/._oid.pm
share/pneumo-typer/ST_tool/lib/URI/urn/isbn.pm
share/pneumo-typer/ST_tool/lib/URI/urn/oid.pm
share/pneumo-typer/Test_data/test1.fasta
share/pneumo-typer/Test_data/test2.gbk
share/pneumo-typer/build_env_setup.sh
share/pneumo-typer/conda_build.sh
share/pneumo-typer/example_fig/CPS_operon.svg
share/pneumo-typer/example_fig/CPS_operon_Tree.svg
share/pneumo-typer/example_fig/heatmap_class.svg
share/pneumo-typer/example_fig/heatmap_gene.svg
share/pneumo-typer/lib/Chi.pm
share/pneumo-typer/lib/Chi/IPC/Pipe.pm
share/pneumo-typer/lib/Chi/Link.pm
share/pneumo-typer/lib/Chi/Link/IPC.pm
share/pneumo-typer/lib/Chi/Link/IPC/Pipe.pm
share/pneumo-typer/lib/Chi/Link/IPC/Pipe/Parent.pm
share/pneumo-typer/lib/Chi/Link/IPC/Pipe/Proc.pm
share/pneumo-typer/lib/Chi/Link/Parent.pm
share/pneumo-typer/lib/Chi/Link/Proc.pm
share/pneumo-typer/lib/Chi/Util.pm
share/pneumo-typer/lib/PTyper.pm
share/pneumo-typer/lib/Para/Runner.pm
share/pneumo-typer/metadata_conda_debug.yaml
share/pneumo-typer/pneumo-typer.pl
share/pneumo-typer/recipes/._build.sh
share/pneumo-typer/recipes/._meta.yaml
share/pneumo-typer/recipes/build.sh
share/pneumo-typer/recipes/meta.yaml
share/pneumo-typer/script/CPS_operon.svg
share/pneumo-typer/script/capsule_genotype.pl
share/pneumo-typer/script/color_configure/colors_configure_file
share/pneumo-typer/script/cps_cluster.pl
share/pneumo-typer/script/font_configure/6x10.bdf.fnt
share/pneumo-typer/script/font_configure/6x10.bdf.ttf
share/pneumo-typer/script/heatmap.pl
share/pneumo-typer/script/interested_gene.pl
share/pneumo-typer/script/lib/OrthoMCL_analysis.pm
share/pneumo-typer/script/lib/PNG_image.pm
share/pneumo-typer/script/lib/SVG_heatmap.pm
share/pneumo-typer/script/lib/SVG_image.pm
share/pneumo-typer/script/lib/font_rotate.pm
share/pneumo-typer/script/lib/metrics.pm
share/pneumo-typer/script/lib/process.pm
share/pneumo-typer/script/mcr.pl
share/pneumo-typer/script/sEach_pTyper_list.pl
share/pneumo-typer/script/ser_join_ST.pl
share/pneumo-typer/script/serotype_correct.pl
share/pneumo-typer/test_list.txt
share/pneumo-typer/update_mlstdb_cgmlstdb.pl
