install.sh
python-scripts/pegas
share/pegas/Snakefile
share/pegas/envs/abricate_env.yml
share/pegas/envs/fastqc_env.yml
share/pegas/envs/mlst_env.yml
share/pegas/envs/prokka_env.yml
share/pegas/envs/report_r_env.yml
share/pegas/envs/roary_env.yml
share/pegas/envs/shovill_env.yml
share/pegas/gc_content.json
share/pegas/layout.html
share/pegas/render_report.R
share/pegas/report_static.css
share/pegas/report_template.Rmd
site-packages/pegas-1.2.4.dist-info/INSTALLER
site-packages/pegas-1.2.4.dist-info/METADATA
site-packages/pegas-1.2.4.dist-info/RECORD
site-packages/pegas-1.2.4.dist-info/REQUESTED
site-packages/pegas-1.2.4.dist-info/WHEEL
site-packages/pegas-1.2.4.dist-info/direct_url.json
site-packages/pegas-1.2.4.dist-info/entry_points.txt
site-packages/pegas-1.2.4.dist-info/licenses/LICENSE
site-packages/pegas-1.2.4.dist-info/top_level.txt
site-packages/pegas/Snakefile
site-packages/pegas/__init__.py
site-packages/pegas/build_dataframe.py
site-packages/pegas/build_report.py
site-packages/pegas/envs/abricate_env.yml
site-packages/pegas/envs/fastqc_env.yml
site-packages/pegas/envs/mlst_env.yml
site-packages/pegas/envs/prokka_env.yml
site-packages/pegas/envs/report_r_env.yml
site-packages/pegas/envs/roary_env.yml
site-packages/pegas/envs/shovill_env.yml
site-packages/pegas/gc_content.json
site-packages/pegas/gui.py
site-packages/pegas/layout.html
site-packages/pegas/main.py
site-packages/pegas/main_lite.py
site-packages/pegas/pipeline.py
site-packages/pegas/render_report.R
site-packages/pegas/report_charts.py
site-packages/pegas/report_contigs.py
site-packages/pegas/report_data.py
site-packages/pegas/report_mlst.py
site-packages/pegas/report_pangenome.py
site-packages/pegas/report_static.css
site-packages/pegas/report_tables.py
site-packages/pegas/report_template.Rmd
site-packages/pegas/run_roary.py
site-packages/pegas/utils.py
