Click the "View it" button to view an interactive Orographer plot. Sample names with '-trio' at the end will include
paternal,
maternal, and sample info in the plot.
Use left/right arrow keys to navigate between rows when viewing plots.
Click Chrom, Region, Sample, Copy Number, Family ID, Paternal ID, Maternal Id, Sex, or Phenotype values
to filter.
Click the View Trio button to view only a trio of samples (Paternal,
Maternal, and Sample) together. Consider combining with the Region filter.
Use the filter button for advanced filtering.
Special Info fields provide annotation insights specific to regions when the mouse hovers over the
record row. For example:
SMN Special Info includes the SMN1 and SMN2 copy number.
HBA Special Info includes a sample genotype call, where possible.
Many regions show possible pathogenic vars in each named haplotype - these may appear in the
gene or pseudogene.