Metadata-Version: 2.4
Name: kingfisher
Version: 0.5.0
Summary: Download/extract biological FASTA/Q read data and metadata
Home-page: https://github.com/wwood/kingfisher-download
Author: Ben Woodcroft
Author-email: benjwoodcroft@gmail.com
License-Expression: GPL-3.0-or-later
Project-URL: Homepage, https://github.com/wwood/kingfisher-download
Keywords: bioinformatics,metagenomics,SRA,ENA
Classifier: Development Status :: 4 - Beta
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Programming Language :: Python :: 3
Requires-Python: >=3.7
Description-Content-Type: text/markdown
License-File: LICENCE.txt
Requires-Dist: extern
Requires-Dist: requests
Requires-Dist: tqdm
Requires-Dist: pandas
Requires-Dist: bird-tool-utils
Requires-Dist: pyarrow
Dynamic: author-email
Dynamic: home-page
Dynamic: license-file

Welcome.

Kingfisher is a fast and flexible program for procurement of sequence files (and
their annotations) from public data sources, including the European Nucleotide
Archive (ENA), NCBI SRA, Amazon AWS and Google Cloud. It's input is one or more
"Run" accessions e.g. DRR001970, or a BioProject accessions e.g. PRJNA621514 or
SRP260223.

For more documentation, see https://wwood.github.io/kingfisher-download/

<img src="images/kingfisher_logo.png" alt="Kingfisher logo" width="600"/>
