{% from 'file_validation.html' import file_validation_report %} {% from 'sample_name_check.html' import sample_name_check_report %} {% from 'fasta_check.html' import fasta_check_report %} {% from 'metadata_validation.html' import metadata_validation_report %} Validation Report
{% if project_title %}

Validation Report: {{ project_title }}

{% else %}

Validation Report

{% endif %} Generated at {{ validation_date }}

Metadata validation results

Ensures that required fields are present and values are formatted correctly. For requirements, please refer to the EVA website.
{{ metadata_validation_report(validation_results) }}

VCF validation results

Checks whether each file is compliant with the VCF specification. Also checks whether the variants' reference alleles match against the reference assembly.
{% for file_name in file_names %}

{{ file_name }}

{{ file_validation_report(validation_results, file_name) }} {% endfor %}

Sample name concordance check

Checks whether information in the metadata is concordant with that contained in the VCF files, in particular sample names.
{{ sample_name_check_report(validation_results)}}

Reference Genome INSDC check

Checks that the reference sequences in the fasta file used to call the variants are accessioned in INSDC.
{{ fasta_check_report(validation_results)}}