bin/dfast_qc
bin/dqc_admin_tools.py
bin/dqc_initial_setup.sh
bin/dqc_multi
bin/dqc_ref_manager.py
opt/dfast_qc-1.1.1/Dockerfile
opt/dfast_qc-1.1.1/Dockerfile.dev
opt/dfast_qc-1.1.1/LICENSE
opt/dfast_qc-1.1.1/README.md
opt/dfast_qc-1.1.1/build_env_setup.sh
opt/dfast_qc-1.1.1/conda_build.sh
opt/dfast_qc-1.1.1/dfast_qc
opt/dfast_qc-1.1.1/docker-compose.yml
opt/dfast_qc-1.1.1/docs/LICENSE
opt/dfast_qc-1.1.1/dqc/__init__.py
opt/dfast_qc-1.1.1/dqc/admin/__init__.py
opt/dfast_qc-1.1.1/dqc/admin/ani_report_parser.py
opt/dfast_qc-1.1.1/dqc/admin/asm_report_parser.py
opt/dfast_qc-1.1.1/dqc/admin/download_all_reference_genomes.py
opt/dfast_qc-1.1.1/dqc/admin/download_master_files.py
opt/dfast_qc-1.1.1/dqc/admin/dump_sqlite_db.py
opt/dfast_qc-1.1.1/dqc/admin/mash_gtdb_sketching.py
opt/dfast_qc-1.1.1/dqc/admin/mash_sketching.py
opt/dfast_qc-1.1.1/dqc/admin/prepare_checkm_data.py
opt/dfast_qc-1.1.1/dqc/admin/prepare_genome_size_data.py
opt/dfast_qc-1.1.1/dqc/admin/prepare_sqlite_db.py
opt/dfast_qc-1.1.1/dqc/admin/setup_shigapass.py
opt/dfast_qc-1.1.1/dqc/admin/update_checkm_db.py
opt/dfast_qc-1.1.1/dqc/admin/update_taxdump.py
opt/dfast_qc-1.1.1/dqc/calc_ani.py
opt/dfast_qc-1.1.1/dqc/checkm_helper.py
opt/dfast_qc-1.1.1/dqc/classify_tc_hits.py
opt/dfast_qc-1.1.1/dqc/common.py
opt/dfast_qc-1.1.1/dqc/completeness_check.py
opt/dfast_qc-1.1.1/dqc/config.py
opt/dfast_qc-1.1.1/dqc/dev.py
opt/dfast_qc-1.1.1/dqc/download_files.py
opt/dfast_qc-1.1.1/dqc/download_files_from_FTP-DEPRECATED.py
opt/dfast_qc-1.1.1/dqc/ete3_helper.py
opt/dfast_qc-1.1.1/dqc/genome_size_check.py
opt/dfast_qc-1.1.1/dqc/gtdb_search.py
opt/dfast_qc-1.1.1/dqc/models.py
opt/dfast_qc-1.1.1/dqc/select_target_genomes.py
opt/dfast_qc-1.1.1/dqc/shigapass_check.py
opt/dfast_qc-1.1.1/dqc/taxonomy_check.py
opt/dfast_qc-1.1.1/dqc_admin_tools.py
opt/dfast_qc-1.1.1/dqc_initial_setup.sh
opt/dfast_qc-1.1.1/dqc_multi
opt/dfast_qc-1.1.1/dqc_ref_manager.py
opt/dfast_qc-1.1.1/environment.yml
opt/dfast_qc-1.1.1/examples/GCA_000829395.1.fna.gz
opt/dfast_qc-1.1.1/examples/GCA_002849935.1.fna.gz
opt/dfast_qc-1.1.1/examples/GCA_007989525.1.fna.gz
opt/dfast_qc-1.1.1/initial_setup.sh
opt/dfast_qc-1.1.1/metadata_conda_debug.yaml
opt/dfast_qc-1.1.1/mss_validate/__init__.py
opt/dfast_qc-1.1.1/mss_validate/batch_dqc.py
opt/dfast_qc-1.1.1/mss_validate/read_dqc_result.py
opt/dfast_qc-1.1.1/requirements.txt
opt/dfast_qc-1.1.1/update_history.md
