python-scripts/csi-ssu
site-packages/csi_ssu-1.0.0.dist-info/INSTALLER
site-packages/csi_ssu-1.0.0.dist-info/METADATA
site-packages/csi_ssu-1.0.0.dist-info/RECORD
site-packages/csi_ssu-1.0.0.dist-info/REQUESTED
site-packages/csi_ssu-1.0.0.dist-info/WHEEL
site-packages/csi_ssu-1.0.0.dist-info/direct_url.json
site-packages/csi_ssu-1.0.0.dist-info/entry_points.txt
site-packages/csi_ssu-1.0.0.dist-info/licenses/LICENSE
site-packages/csi_ssu-1.0.0.dist-info/top_level.txt
site-packages/csi_ssu/__init__.py
site-packages/csi_ssu/cli.py
site-packages/csi_ssu/data/__init__.py
site-packages/csi_ssu/data/queries/pr2_version_5.1.0_18S_divisions_query.fasta
site-packages/csi_ssu/data/reference_packages/Amoebozoa.refpkg/Amoebozoa.aln
site-packages/csi_ssu/data/reference_packages/Amoebozoa.refpkg/Amoebozoa.info
site-packages/csi_ssu/data/reference_packages/Amoebozoa.refpkg/Amoebozoa.seq_info
site-packages/csi_ssu/data/reference_packages/Amoebozoa.refpkg/Amoebozoa.tax
site-packages/csi_ssu/data/reference_packages/Amoebozoa.refpkg/Amoebozoa.tre
site-packages/csi_ssu/data/reference_packages/Amoebozoa.refpkg/CONTENTS.json
site-packages/csi_ssu/data/reference_packages/Amoebozoa.refpkg/phylo_modelj4x5113p.json
site-packages/csi_ssu/data/reference_packages/Amoebozoa.refpkg/treedho4hcg5.tre
site-packages/csi_ssu/data/reference_packages/Archaeplastida.refpkg/Archaeplastida.aln
site-packages/csi_ssu/data/reference_packages/Archaeplastida.refpkg/Archaeplastida.info
site-packages/csi_ssu/data/reference_packages/Archaeplastida.refpkg/Archaeplastida.seq_info
site-packages/csi_ssu/data/reference_packages/Archaeplastida.refpkg/Archaeplastida.tax
site-packages/csi_ssu/data/reference_packages/Archaeplastida.refpkg/Archaeplastida.tre
site-packages/csi_ssu/data/reference_packages/Archaeplastida.refpkg/CONTENTS.json
site-packages/csi_ssu/data/reference_packages/Archaeplastida.refpkg/phylo_modele5z3k35m.json
site-packages/csi_ssu/data/reference_packages/Archaeplastida.refpkg/treejbhb1_w1.tre
site-packages/csi_ssu/data/reference_packages/CRuMs.refpkg/CONTENTS.json
site-packages/csi_ssu/data/reference_packages/CRuMs.refpkg/CRuMs.aln
site-packages/csi_ssu/data/reference_packages/CRuMs.refpkg/CRuMs.info
site-packages/csi_ssu/data/reference_packages/CRuMs.refpkg/CRuMs.seq_info
site-packages/csi_ssu/data/reference_packages/CRuMs.refpkg/CRuMs.tax
site-packages/csi_ssu/data/reference_packages/CRuMs.refpkg/CRuMs.tre
site-packages/csi_ssu/data/reference_packages/CRuMs.refpkg/phylo_modeltj3lhgc5.json
site-packages/csi_ssu/data/reference_packages/CRuMs.refpkg/treeo_s87y_s.tre
site-packages/csi_ssu/data/reference_packages/Cryptista.refpkg/CONTENTS.json
site-packages/csi_ssu/data/reference_packages/Cryptista.refpkg/Cryptista.aln
site-packages/csi_ssu/data/reference_packages/Cryptista.refpkg/Cryptista.info
site-packages/csi_ssu/data/reference_packages/Cryptista.refpkg/Cryptista.seq_info
site-packages/csi_ssu/data/reference_packages/Cryptista.refpkg/Cryptista.tax
site-packages/csi_ssu/data/reference_packages/Cryptista.refpkg/Cryptista.tre
site-packages/csi_ssu/data/reference_packages/Cryptista.refpkg/phylo_modelpv53fqqw.json
site-packages/csi_ssu/data/reference_packages/Cryptista.refpkg/tree9hsx1o2m.tre
site-packages/csi_ssu/data/reference_packages/Excavata.refpkg/CONTENTS.json
site-packages/csi_ssu/data/reference_packages/Excavata.refpkg/Excavata.aln
site-packages/csi_ssu/data/reference_packages/Excavata.refpkg/Excavata.info
site-packages/csi_ssu/data/reference_packages/Excavata.refpkg/Excavata.seq_info
site-packages/csi_ssu/data/reference_packages/Excavata.refpkg/Excavata.tax
site-packages/csi_ssu/data/reference_packages/Excavata.refpkg/Excavata.tre
site-packages/csi_ssu/data/reference_packages/Excavata.refpkg/phylo_modelnn2gjlun.json
site-packages/csi_ssu/data/reference_packages/Excavata.refpkg/treexfx3t3p5.tre
site-packages/csi_ssu/data/reference_packages/Haptista.refpkg/CONTENTS.json
site-packages/csi_ssu/data/reference_packages/Haptista.refpkg/Haptista.aln
site-packages/csi_ssu/data/reference_packages/Haptista.refpkg/Haptista.info
site-packages/csi_ssu/data/reference_packages/Haptista.refpkg/Haptista.seq_info
site-packages/csi_ssu/data/reference_packages/Haptista.refpkg/Haptista.tax
site-packages/csi_ssu/data/reference_packages/Haptista.refpkg/Haptista.tre
site-packages/csi_ssu/data/reference_packages/Haptista.refpkg/phylo_model5kek6luh.json
site-packages/csi_ssu/data/reference_packages/Haptista.refpkg/treed6b3v8c1.tre
site-packages/csi_ssu/data/reference_packages/Obazoa.refpkg/CONTENTS.json
site-packages/csi_ssu/data/reference_packages/Obazoa.refpkg/Obazoa.aln
site-packages/csi_ssu/data/reference_packages/Obazoa.refpkg/Obazoa.info
site-packages/csi_ssu/data/reference_packages/Obazoa.refpkg/Obazoa.seq_info
site-packages/csi_ssu/data/reference_packages/Obazoa.refpkg/Obazoa.tax
site-packages/csi_ssu/data/reference_packages/Obazoa.refpkg/Obazoa.tre
site-packages/csi_ssu/data/reference_packages/Obazoa.refpkg/phylo_modelgill8uln.json
site-packages/csi_ssu/data/reference_packages/Obazoa.refpkg/phylo_modelk6q81nnc.json
site-packages/csi_ssu/data/reference_packages/Obazoa.refpkg/treeo7zobbdb.tre
site-packages/csi_ssu/data/reference_packages/Obazoa.refpkg/treeye1wpub5.tre
site-packages/csi_ssu/data/reference_packages/Provora.refpkg/CONTENTS.json
site-packages/csi_ssu/data/reference_packages/Provora.refpkg/Provora.aln
site-packages/csi_ssu/data/reference_packages/Provora.refpkg/Provora.info
site-packages/csi_ssu/data/reference_packages/Provora.refpkg/Provora.seq_info
site-packages/csi_ssu/data/reference_packages/Provora.refpkg/Provora.tax
site-packages/csi_ssu/data/reference_packages/Provora.refpkg/Provora.tre
site-packages/csi_ssu/data/reference_packages/Provora.refpkg/phylo_modelo9rgyeq9.json
site-packages/csi_ssu/data/reference_packages/Provora.refpkg/treeq1glnxv1.tre
site-packages/csi_ssu/data/reference_packages/TSAR.refpkg/CONTENTS.json
site-packages/csi_ssu/data/reference_packages/TSAR.refpkg/TSAR.aln
site-packages/csi_ssu/data/reference_packages/TSAR.refpkg/TSAR.info
site-packages/csi_ssu/data/reference_packages/TSAR.refpkg/TSAR.seq_info
site-packages/csi_ssu/data/reference_packages/TSAR.refpkg/TSAR.tax
site-packages/csi_ssu/data/reference_packages/TSAR.refpkg/TSAR.tre
site-packages/csi_ssu/data/reference_packages/TSAR.refpkg/phylo_modela4szdsl7.json
site-packages/csi_ssu/data/reference_packages/TSAR.refpkg/tree6ucr7665.tre
site-packages/csi_ssu/runner.py
site-packages/csi_ssu/scripts/__init__.py
site-packages/csi_ssu/scripts/parse_blast.py
site-packages/csi_ssu/scripts/plot_tree.py
site-packages/csi_ssu/scripts/run_pplacer.py
site-packages/csi_ssu/scripts/summarize_results.py
site-packages/csi_ssu/workflows/__init__.py
site-packages/csi_ssu/workflows/screening.smk
