a
BedtoolsIntersectArgs
absolute
CannoliFn
add
CommandBuilder
addArgument
CommandBuilder
addArguments
CommandBuilder
addEnvironment
CommandBuilder
addFile
CommandBuilder
addFiles
BcftoolsMpileupArgs
BcftoolsNormArgs
BedtoolsIntersectArgs
Bowtie2Args
BowtieArgs
BwaArgs
FreebayesArgs
GemArgs
Minimap2Args
SamtoolsMpileupArgs
VepArgs
VtNormalizeArgs
CommandBuilder
addMount
CommandBuilder
addMounts
CommandBuilder
alignWithBowtie
CannoliFragmentDataset
alignWithBowtie2
CannoliFragmentDataset
alignWithBwa
CannoliFragmentDataset
alignWithGem
CannoliFragmentDataset
alignWithMinimap2
CannoliFragmentDataset
annotateWithSnpEff
CannoliVariantContextDataset
annotateWithVep
CannoliVariantContextDataset
apply
BcftoolsMpileup
BcftoolsNorm
BedtoolsIntersect
Bowtie
Bowtie2
Bwa
Freebayes
Gem
Minimap2
SamtoolsMpileup
SnpEff
Vep
VtNormalize
args
BcftoolsMpileup
BcftoolsNorm
BedtoolsIntersect
Bowtie
Bowtie2
Bwa
Freebayes
Gem
Minimap2
SamtoolsMpileup
SnpEff
Vep
VtNormalize
assembly
VepArgs