A B C D E F G H I K L M N O P Q R S T U V _
All Classes All Packages
All Classes All Packages
All Classes All Packages
I
- IMIDAZOLIDINE_OXIDATION - biotransformer.transformation.MRPatterns.ReactionName
- IMINIUM_STANDARDIZATION - biotransformer.transformation.MRPatterns.ReactionName
- inchiGenFactory - Variable in class biotransformer.btransformers.Biotransformer
- inchiGenFactory - Static variable in class biotransformer.utils.ChemStructureExplorer
- inchiGenFactory - Variable in class biotransformer.utils.MetaboliteFinder
- inchikeyEqualityHolds(IAtomContainer, IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
-
Given two molecules, find out whether they are equal.
- INOSITOL_3_PHOSPHATE_TRANSFER_TO_CDP_DIACYLGLYCEROL - biotransformer.transformation.MRPatterns.ReactionName
- INOSITOL_PHOSPHATE_METABOLISM - biotransformer.transformation.MetabolicPathway.MPathwayName
- isAcylCoAConjugate(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isAlphaHydroxyFattyAcid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isAromatic(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isBetaHydroxyFattyAcid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isBioTransformerValid(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isBioTransformerValidStrict(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isBtValid(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isC23BileAcid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isC24BileAcid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isCompoundInorganic(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isConjugationCandidate(IAtomContainer) - Method in class biotransformer.btransformers.ECBasedBTransformer
- isConjugationCandidate(IAtomContainer) - Method in class biotransformer.btransformers.HGutBTransformer
- isDeconjugationCandidate(IAtomContainer) - Method in class biotransformer.btransformers.ECBasedBTransformer
- isDeconjugationCandidate(IAtomContainer) - Method in class biotransformer.btransformers.HGutBTransformer
- isEtherLipid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isFattyAcid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isGlutathioneConjugate(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isGlycerol_3_PhosphateInositol(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isGlyceroLipid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isGlycerophosphoLipid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isGlycinatedCompound(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isGlycosylatedCompound(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isInvalidPhase2Metabolite(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isInvalidPhaseIISubstrateByExlcusion(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isMetabolizablePolyphenolOrDerivative(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isMixture(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- ISOCYANATE_STANDARDIZATION - biotransformer.transformation.MRPatterns.ReactionName
- ISOFLAVAN_4_OL_DEHYDROXYLATION - biotransformer.transformation.MRPatterns.ReactionName
- ISOFLAVANONE_C_RING_FISSION_PATTERN1 - biotransformer.transformation.MRPatterns.ReactionName
- ISOFLAVANONE_C_RING_FISSION_PATTERN2 - biotransformer.transformation.MRPatterns.ReactionName
- ISOFLAVANONE_DEHYDRATION - biotransformer.transformation.MRPatterns.ReactionName
- ISOFLAVONE_4P_O_METHYLATION - biotransformer.transformation.MRPatterns.ReactionName
- ISOFLAVONE_4P_OH_GLUCURONIDATION - biotransformer.transformation.MRPatterns.ReactionName
- ISOFLAVONE_6_C_DEGLYCOSYLATION - biotransformer.transformation.MRPatterns.ReactionName
- ISOFLAVONE_7_OH_GLUCURONIDATION - biotransformer.transformation.MRPatterns.ReactionName
- ISOFLAVONE_8_C_DEGLYCOSYLATION - biotransformer.transformation.MRPatterns.ReactionName
- ISOFLAVONE_REDUCTION_TO_ISOFLAVANONE - biotransformer.transformation.MRPatterns.ReactionName
- isOligoOrPolysaccharide(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isOmegaHydroxyFattyAcid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- ISOMERIZATION_OF_ALKYLARENE_OXIDE_TO_PHENOL - biotransformer.transformation.MRPatterns.ReactionName
- ISOXAZOLE_RING_OPENING - biotransformer.transformation.MRPatterns.ReactionName
-
Miscellaneous
- isPhaseIPolyphenolCandidateOrDerivative(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isPolyphenolOrDerivative(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isPotentialHumanPhase2SubstrateByReactionPatternMatching(IAtomContainer) - Method in class biotransformer.btransformers.Phase2BTransformer
- isPotentialNonHumanPhase2SubstrateByReactionPatternMatching(IAtomContainer) - Method in class biotransformer.btransformers.Phase2BTransformer
- isPotentialPhase2SubstrateByReactionPatternMatching(IAtomContainer) - Method in class biotransformer.btransformers.Phase2BTransformer
- isPotentialPhaseIISubstrateByReactionPatternMatching(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isPotentialSubstrateByReactionPatternMatching(IAtomContainer, Enzyme.EnzymeName) - Method in class biotransformer.esaprediction.ESSpecificityPredictor
- isPpsCofactor(String) - Static method in class biotransformer.utils.ChemStructureExplorer
- isPpsCofactor(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isPpsDeadEndCompound(String) - Static method in class biotransformer.utils.ChemStructureExplorer
- isPpsDeadEndCompound(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isPpsValid(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isSaturatedFattyAcid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isSphingoLipid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isStandardAminoAcid(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isSulfatedCompound(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isSulfateEster(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isTetrapyrrole(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isUnneccessaryMetabolite(IAtomContainer) - Static method in class biotransformer.utils.ChemStructureExplorer
- isUnsaturatedFattyAcid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isUnsubstitutedSatudatedFattyAcid(IAtomContainer) - Static method in class biotransformer.utils.ChemicalClassFinder
- isValid_EC_2_8_2_2_substrate(IAtomContainer, boolean) - Method in class biotransformer.esaprediction.ESSpecificityPredictor
- isValidCyp450Substrate(IAtomContainer, Enzyme.EnzymeName) - Method in class biotransformer.esaprediction.ESSpecificityPredictor
- isValidCyp450Substrate(IAtomContainer, Enzyme.EnzymeName, ArrayList<ChemicalClassFinder.ChemicalClassName>) - Method in class biotransformer.esaprediction.ESSpecificityPredictor
- isValidSubstrate(IAtomContainer, Enzyme.EnzymeName) - Method in class biotransformer.btransformers.Biotransformer
- isValidSubstrate(IAtomContainer, Enzyme.EnzymeName) - Method in class biotransformer.esaprediction.ESSpecificityPredictor
- isValidSubstrate(IAtomContainer, Enzyme.EnzymeName, ArrayList<ChemicalClassFinder.ChemicalClassName>) - Method in class biotransformer.esaprediction.ESSpecificityPredictor
All Classes All Packages