Differential methylation anlsysis for bisulfite sequencing data

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Documentation for package ‘MethCP’ version 1.0.0

Help Pages

calcLociStat Calculate the per-cytosine statistics for simple two-group comparisons.
calcLociStatTimeCourse Calculate the per-cytosine statistics for time-course data.
createBsseqObject Helper function to read text files and create a bsseq object.
getSigRegion Obtain the significant DMRs.
MethCP Class 'MethCP'
MethCP-class Class 'MethCP'
MethCPFromStat Create a 'MethCP' object given the per-cytosine based tests.
segmentMethCP Perform segmentation on a 'MethCP' object.
show-method The show method