------------------------------------------------------------------------------------
| Key                 | Values                                                     |
------------------------------------------------------------------------------------
| speciesTree         | example/data/Species.nwk                                   |
| target              | A0                                                         |
| extantSpeciesFilter |                                                            |
| genesFiles          | example/data/genes/genes.%s.list.bz2                       |
| ancGenesFiles       | example/results/ancGenes/size-0.9-1.1/ancGenes.%s.list.bz2 |
| OUT.pairwise        | example/results/pairwise/pairs-size-0.9-1.1/%s.list.bz2    |
------------------------------------------------------------------------------------
Loading genome of example/results/ancGenes/size-0.9-1.1/ancGenes.A0.list.bz2 ... (ancestral genes) OK
Loading genome of example/results/ancGenes/size-0.9-1.1/ancGenes.A1.list.bz2 ... (ancestral genes) OK
Loading genome of example/results/ancGenes/size-0.9-1.1/ancGenes.A2.list.bz2 ... (ancestral genes) OK
Loading genome of example/results/ancGenes/size-0.9-1.1/ancGenes.A3.list.bz2 ... (ancestral genes) OK
time for loading 0.543543815612793
Loading genome of example/data/genes/genes.M1.list.bz2 ... (Ensembl) OK
Extraction of gene pairs from M1  ... OK
Loading genome of example/data/genes/genes.M2.list.bz2 ... (Ensembl) OK
Extraction of gene pairs from M2  ... OK
Loading genome of example/data/genes/genes.M3.list.bz2 ... (Ensembl) OK
Extraction of gene pairs from M3  ... OK
Loading genome of example/data/genes/genes.M4.list.bz2 ... (Ensembl) OK
Extraction of gene pairs from M4  ... OK
Loading genome of example/data/genes/genes.M5.list.bz2 ... (Ensembl) OK
Extraction of gene pairs from M5  ... OK
time for task1 1.4404449462890625
Number of pairs for A0 [('A1', 9327), ('A2', 8210)]
Intersection between A1 and A2 ... OK
7523 conserved pairs between descendants A0
Number of pairs for A1 [('A3', 13035), ('M3', 12336)]
Intersection between A3 and M3 ... OK
11521 conserved pairs between descendants A1
Number of pairs for A2 [('M4', 9806), ('M5', 8177)]
Intersection between M4 and M5 ... OK
8059 conserved pairs between descendants A2
Number of pairs for A3 [('M1', 14321), ('M2', 14324)]
Intersection between M1 and M2 ... OK
13570 conserved pairs between descendants A3
time for task 2 0.9152729511260986
7523 conserved pairs for A0
11850 conserved pairs for A1
9275 conserved pairs for A2
14116 conserved pairs for A3
Elapsed time task3: 0.41957712173461914 3.318887948989868
