--------------------------------------------------------------------------------------
| Key                 | Values                                                       |
--------------------------------------------------------------------------------------
| speciesTree         | example/data/Species.nwk                                     |
| target              | A0                                                           |
| extantSpeciesFilter |                                                              |
| genesFiles          | example/data/genes/genes.%s.list.bz2                         |
| ancGenesFiles       | example/results/ancGenes/size-0.77-1.33/ancGenes.%s.list.bz2 |
| OUT.pairwise        | example/results/pairwise/pairs-size-0.77-1.33/%s.list.bz2    |
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Loading genome of example/results/ancGenes/size-0.77-1.33/ancGenes.A0.list.bz2 ... (ancestral genes) OK
Loading genome of example/results/ancGenes/size-0.77-1.33/ancGenes.A1.list.bz2 ... (ancestral genes) OK
Loading genome of example/results/ancGenes/size-0.77-1.33/ancGenes.A2.list.bz2 ... (ancestral genes) OK
Loading genome of example/results/ancGenes/size-0.77-1.33/ancGenes.A3.list.bz2 ... (ancestral genes) OK
time for loading 0.670159101486206
Loading genome of example/data/genes/genes.M1.list.bz2 ... (Ensembl) OK
Extraction of gene pairs from M1  ... OK
Loading genome of example/data/genes/genes.M2.list.bz2 ... (Ensembl) OK
Extraction of gene pairs from M2  ... OK
Loading genome of example/data/genes/genes.M3.list.bz2 ... (Ensembl) OK
Extraction of gene pairs from M3  ... OK
Loading genome of example/data/genes/genes.M4.list.bz2 ... (Ensembl) OK
Extraction of gene pairs from M4  ... OK
Loading genome of example/data/genes/genes.M5.list.bz2 ... (Ensembl) OK
Extraction of gene pairs from M5  ... OK
time for task1 1.579935073852539
Number of pairs for A0 [('A1', 15492), ('A2', 14901)]
Intersection between A1 and A2 ... OK
11237 conserved pairs between descendants A0
Number of pairs for A1 [('A3', 14908), ('M3', 13350)]
Intersection between A3 and M3 ... OK
11731 conserved pairs between descendants A1
Number of pairs for A2 [('M4', 11642), ('M5', 10556)]
Intersection between M4 and M5 ... OK
6735 conserved pairs between descendants A2
Number of pairs for A3 [('M1', 15176), ('M2', 15142)]
Intersection between M1 and M2 ... OK
13873 conserved pairs between descendants A3
time for task 2 1.0472309589385986
11237 conserved pairs for A0
13374 conserved pairs for A1
11935 conserved pairs for A2
15025 conserved pairs for A3
Elapsed time task3: 0.5146539211273193 3.8120410442352295
