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| Key           | Values                                                                                                                                                |
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| speciesTree   | example/data/Species.nwk                                                                                                                              |
| target        | A0                                                                                                                                                    |
| pairwise      | example/results/pairwise/pairs-size-0.77-1.33/%s.list.bz2                                                                                             |
| IN.ancBlocks  | example/results/ancBlocks/denovo-size-1.0-1.0.fillin-size-0.9-1.1.fusion-size-0.9-1.1.insertion-size-0.9-1.1/blocks.%s.list.bz2                       |
| OUT.ancBlocks | example/results/ancBlocks/denovo-size-1.0-1.0.fillin-size-0.9-1.1.fusion-size-0.9-1.1.insertion-size-0.9-1.1.fillin-size-0.77-1.33/blocks.%s.list.bz2 |
| LOG.ancGraph  | example/results/ancBlocks/denovo-size-1.0-1.0.fillin-size-0.9-1.1.fusion-size-0.9-1.1.insertion-size-0.9-1.1.fillin-size-0.77-1.33/graph.%s.txt.bz2   |
| nbThreads     | 1                                                                                                                                                     |
| minimalWeight | 1                                                                                                                                                     |
| mustExtend    | False                                                                                                                                                 |
| loop          | False                                                                                                                                                 |
| timeout       | 150                                                                                                                                                   |
| func          | 0,32|100,40t|10000                                                                                                                                    |
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Targets: ['A0', 'A1', 'A2', 'A3']
total computation time 9.65685486793518
Loading ancestral blocks of example/results/ancBlocks/denovo-size-1.0-1.0.fillin-size-0.9-1.1.fusion-size-0.9-1.1.insertion-size-0.9-1.1/blocks.A0.list.bz2 ... 2 [4/10/20] [14/26/44] 137 [15.33/15.86-525] + 8226 singletons OK
Building graphs ... OK
adding singletons ... OK
Output blocks of A0 2 [5/11/25] [18/33/54] 164 [18.52/19.64-525] + 6549 singletons
Loading ancestral blocks of example/results/ancBlocks/denovo-size-1.0-1.0.fillin-size-0.9-1.1.fusion-size-0.9-1.1.insertion-size-0.9-1.1/blocks.A1.list.bz2 ... 2 [6/15/39] [29/58/90] 238 [27.57/32.30-446] + 5043 singletons OK
Building graphs ... OK
adding singletons ... OK
Output blocks of A1 2 [6/16/39] [30/61/95] 250 [28.75/33.95-446] + 4516 singletons
Loading ancestral blocks of example/results/ancBlocks/denovo-size-1.0-1.0.fillin-size-0.9-1.1.fusion-size-0.9-1.1.insertion-size-0.9-1.1/blocks.A2.list.bz2 ... 2 [5/11/28] [19/38/61] 139 [19.97/21.19-489] + 5805 singletons OK
Building graphs ... OK
adding singletons ... OK
Output blocks of A2 2 [6/13/31] [21/44/71] 168 [22.63/24.59-489] + 4502 singletons
Loading ancestral blocks of example/results/ancBlocks/denovo-size-1.0-1.0.fillin-size-0.9-1.1.fusion-size-0.9-1.1.insertion-size-0.9-1.1/blocks.A3.list.bz2 ... 2 [10/38/88] [72/133/235] 505 [66.96/86.87-214] + 3789 singletons OK
Building graphs ... OK
adding singletons ... OK
Output blocks of A3 2 [10/38/91] [77/140/247] 529 [69.65/90.60-214] + 3213 singletons
