Packages

package sequence

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Visibility
  1. Public
  2. All

Type Members

  1. case class DatasetBoundSequenceDataset extends SequenceDataset with DatasetBoundGenomicDataset[Sequence, Sequence, SequenceDataset] with Product with Serializable
  2. case class DatasetBoundSliceDataset extends SliceDataset with DatasetBoundGenomicDataset[Slice, Slice, SliceDataset] with Product with Serializable
  3. class FASTAInFormatter extends InFormatter[Sequence, Sequence, SequenceDataset, FASTAInFormatter]
  4. case class ParquetUnboundSequenceDataset extends SequenceDataset with Product with Serializable
  5. case class ParquetUnboundSliceDataset extends SliceDataset with Product with Serializable
  6. case class RDDBoundSequenceDataset extends SequenceDataset with Product with Serializable
  7. case class RDDBoundSliceDataset extends SliceDataset with Product with Serializable
  8. sealed abstract class SequenceDataset extends AvroGenomicDataset[Sequence, Sequence, SequenceDataset] with MultisampleGenomicDataset[Sequence, Sequence, SequenceDataset]
  9. sealed abstract class SliceDataset extends AvroGenomicDataset[Slice, Slice, SliceDataset] with MultisampleGenomicDataset[Slice, Slice, SliceDataset]

Value Members

  1. object FASTAInFormatter extends InFormatterCompanion[Sequence, Sequence, SequenceDataset, FASTAInFormatter] with Serializable

    InFormatter companion that creates an InFormatter that writes FASTA.

  2. object SequenceDataset
  3. object SliceDataset

Ungrouped