case class VariantCallingAnnotations(filtersApplied: Option[Boolean] = None, filtersPassed: Option[Boolean] = None, filtersFailed: Seq[String] = Seq(), downsampled: Option[Boolean] = None, baseQRankSum: Option[Float] = None, fisherStrandBiasPValue: Option[Float] = None, rmsMapQ: Option[Float] = None, mapq0Reads: Option[Int] = None, mqRankSum: Option[Float] = None, readPositionRankSum: Option[Float] = None, genotypePriors: Seq[Float] = Seq(), genotypePosteriors: Seq[Float] = Seq(), vqslod: Option[Float] = None, culprit: Option[String] = None, attributes: Map[String, String] = Map()) extends Product with Serializable
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Visibility
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Instance Constructors
- new VariantCallingAnnotations(filtersApplied: Option[Boolean] = None, filtersPassed: Option[Boolean] = None, filtersFailed: Seq[String] = Seq(), downsampled: Option[Boolean] = None, baseQRankSum: Option[Float] = None, fisherStrandBiasPValue: Option[Float] = None, rmsMapQ: Option[Float] = None, mapq0Reads: Option[Int] = None, mqRankSum: Option[Float] = None, readPositionRankSum: Option[Float] = None, genotypePriors: Seq[Float] = Seq(), genotypePosteriors: Seq[Float] = Seq(), vqslod: Option[Float] = None, culprit: Option[String] = None, attributes: Map[String, String] = Map())
Value Members
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final
def
!=(arg0: Any): Boolean
- Definition Classes
- AnyRef → Any
-
final
def
##(): Int
- Definition Classes
- AnyRef → Any
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final
def
==(arg0: Any): Boolean
- Definition Classes
- AnyRef → Any
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final
def
asInstanceOf[T0]: T0
- Definition Classes
- Any
- val attributes: Map[String, String]
- val baseQRankSum: Option[Float]
-
def
canEqual(that: Any): Boolean
- Definition Classes
- VariantCallingAnnotations → Equals
-
def
clone(): AnyRef
- Attributes
- protected[lang]
- Definition Classes
- AnyRef
- Annotations
- @throws( ... ) @native()
- val culprit: Option[String]
- val downsampled: Option[Boolean]
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final
def
eq(arg0: AnyRef): Boolean
- Definition Classes
- AnyRef
- val filtersApplied: Option[Boolean]
- val filtersFailed: Seq[String]
- val filtersPassed: Option[Boolean]
-
def
finalize(): Unit
- Attributes
- protected[lang]
- Definition Classes
- AnyRef
- Annotations
- @throws( classOf[java.lang.Throwable] )
- val fisherStrandBiasPValue: Option[Float]
- val genotypePosteriors: Seq[Float]
- val genotypePriors: Seq[Float]
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final
def
getClass(): Class[_]
- Definition Classes
- AnyRef → Any
- Annotations
- @native()
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final
def
isInstanceOf[T0]: Boolean
- Definition Classes
- Any
- val mapq0Reads: Option[Int]
- val mqRankSum: Option[Float]
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final
def
ne(arg0: AnyRef): Boolean
- Definition Classes
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final
def
notify(): Unit
- Definition Classes
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- Annotations
- @native()
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final
def
notifyAll(): Unit
- Definition Classes
- AnyRef
- Annotations
- @native()
-
def
productArity: Int
- Definition Classes
- VariantCallingAnnotations → Product
-
def
productElement(i: Int): Any
- Definition Classes
- VariantCallingAnnotations → Product
- val readPositionRankSum: Option[Float]
- val rmsMapQ: Option[Float]
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final
def
synchronized[T0](arg0: ⇒ T0): T0
- Definition Classes
- AnyRef
- def toAvro: formats.avro.VariantCallingAnnotations
- val vqslod: Option[Float]
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final
def
wait(): Unit
- Definition Classes
- AnyRef
- Annotations
- @throws( ... )
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final
def
wait(arg0: Long, arg1: Int): Unit
- Definition Classes
- AnyRef
- Annotations
- @throws( ... )
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final
def
wait(arg0: Long): Unit
- Definition Classes
- AnyRef
- Annotations
- @throws( ... ) @native()