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org.bdgenomics.adam.projections

TranscriptEffectField

object TranscriptEffectField extends FieldEnumeration

Linear Supertypes
FieldEnumeration, Enumeration, Serializable, Serializable, AnyRef, Any
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Inherited
  1. TranscriptEffectField
  2. FieldEnumeration
  3. Enumeration
  4. Serializable
  5. Serializable
  6. AnyRef
  7. Any
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Visibility
  1. Public
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Type Members

  1. class SchemaVal extends Val with FieldValue

    An enumerated field that is part of this schema.

    An enumerated field that is part of this schema.

    Definition Classes
    FieldEnumeration
  2. class Val extends Value with Serializable
    Attributes
    protected
    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID()
  3. abstract class Value extends Ordered[Value] with Serializable
    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID()
  4. class ValueSet extends AbstractSet[Value] with SortedSet[Value] with SortedSetLike[Value, ValueSet] with Serializable
    Definition Classes
    Enumeration

Value Members

  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  4. final def SchemaValue: SchemaVal
    Attributes
    protected
    Definition Classes
    FieldEnumeration
  5. final def Value(i: Int, name: String): Value
    Attributes
    protected
    Definition Classes
    Enumeration
  6. final def Value(name: String): Value
    Attributes
    protected
    Definition Classes
    Enumeration
  7. final def Value(i: Int): Value
    Attributes
    protected
    Definition Classes
    Enumeration
  8. final def Value: Value
    Attributes
    protected
    Definition Classes
    Enumeration
  9. val alternateAllele: SchemaVal
  10. val alternateCodingSequence: SchemaVal
  11. val alternateProteinSequence: SchemaVal
  12. final def apply(x: Int): Value
    Definition Classes
    Enumeration
  13. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  14. val biotype: SchemaVal
  15. val cdnaLength: SchemaVal
  16. val cdnaPosition: SchemaVal
  17. def clone(): AnyRef
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  18. val codingSequenceLength: SchemaVal
  19. val codingSequencePosition: SchemaVal
  20. val distance: SchemaVal
  21. val effects: SchemaVal
  22. final def eq(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  23. def equals(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  24. val featureId: SchemaVal
  25. val featureType: SchemaVal
  26. def finalize(): Unit
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  27. val geneId: SchemaVal
  28. val geneName: SchemaVal
  29. val genomicHgvs: SchemaVal
  30. final def getClass(): Class[_]
    Definition Classes
    AnyRef → Any
    Annotations
    @native()
  31. def hashCode(): Int
    Definition Classes
    AnyRef → Any
    Annotations
    @native()
  32. val impact: SchemaVal
  33. final def isInstanceOf[T0]: Boolean
    Definition Classes
    Any
  34. final def maxId: Int
    Definition Classes
    Enumeration
  35. val messages: SchemaVal
  36. final def ne(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  37. var nextId: Int
    Attributes
    protected
    Definition Classes
    Enumeration
  38. var nextName: Iterator[String]
    Attributes
    protected
    Definition Classes
    Enumeration
  39. final def notify(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  40. final def notifyAll(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  41. val proteinHgvs: SchemaVal
  42. val proteinLength: SchemaVal
  43. val proteinPosition: SchemaVal
  44. val rank: SchemaVal
  45. def readResolve(): AnyRef
    Attributes
    protected
    Definition Classes
    Enumeration
  46. val recordSchema: Schema
    Definition Classes
    FieldEnumeration
  47. val referenceCodingSequence: SchemaVal
  48. val referenceProteinSequence: SchemaVal
  49. val strand: SchemaVal
  50. final def synchronized[T0](arg0: ⇒ T0): T0
    Definition Classes
    AnyRef
  51. def toString(): String
    Definition Classes
    Enumeration → AnyRef → Any
  52. val total: SchemaVal
  53. val transcriptHgvs: SchemaVal
  54. def values: ValueSet
    Definition Classes
    Enumeration
  55. final def wait(): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  56. final def wait(arg0: Long, arg1: Int): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  57. final def wait(arg0: Long): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  58. final def withName(s: String): Value
    Definition Classes
    Enumeration

Inherited from FieldEnumeration

Inherited from Enumeration

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

Ungrouped