class FASTQInFormatter extends InFormatter[Alignment, Alignment, AlignmentDataset, FASTQInFormatter]

Linear Supertypes
InFormatter[Alignment, Alignment, AlignmentDataset, FASTQInFormatter], Serializable, Serializable, AnyRef, Any
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Inherited
  1. FASTQInFormatter
  2. InFormatter
  3. Serializable
  4. Serializable
  5. AnyRef
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Value Members

  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean
    Definition Classes
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  4. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  5. def clone(): AnyRef
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  6. val companion: FASTQInFormatter.type
    Attributes
    protected
    Definition Classes
    FASTQInFormatterInFormatter
  7. final def eq(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  8. def equals(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  9. def finalize(): Unit
    Attributes
    protected[lang]
    Definition Classes
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    @throws( classOf[java.lang.Throwable] )
  10. final def getClass(): Class[_]
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    @native()
  11. def hashCode(): Int
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    @native()
  12. final def isInstanceOf[T0]: Boolean
    Definition Classes
    Any
  13. final def ne(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  14. final def notify(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native()
  15. final def notifyAll(): Unit
    Definition Classes
    AnyRef
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    @native()
  16. final def synchronized[T0](arg0: ⇒ T0): T0
    Definition Classes
    AnyRef
  17. def toString(): String
    Definition Classes
    AnyRef → Any
  18. final def wait(): Unit
    Definition Classes
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    @throws( ... )
  19. final def wait(arg0: Long, arg1: Int): Unit
    Definition Classes
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    @throws( ... )
  20. final def wait(arg0: Long): Unit
    Definition Classes
    AnyRef
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    @throws( ... ) @native()
  21. def write(os: OutputStream, iter: Iterator[Alignment]): Unit

    Writes alignments to an output stream in FASTQ format.

    Writes alignments to an output stream in FASTQ format.

    os

    An OutputStream connected to a process we are piping to.

    iter

    An iterator of records to write.

    Definition Classes
    FASTQInFormatterInFormatter

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

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