case class Feature(featureId: Option[String] = None, sampleId: Option[String] = None, name: Option[String] = None, source: Option[String] = None, featureType: Option[String] = None, referenceName: Option[String] = None, start: Option[Long] = None, end: Option[Long] = None, strand: Option[String] = None, phase: Option[Int] = None, frame: Option[Int] = None, score: Option[Double] = None, geneId: Option[String] = None, transcriptId: Option[String] = None, exonId: Option[String] = None, aliases: Seq[String] = Seq(), parentIds: Seq[String] = Seq(), target: Option[String] = None, gap: Option[String] = None, derivesFrom: Option[String] = None, notes: Seq[String] = Seq(), dbxrefs: Seq[Dbxref] = Seq(), ontologyTerms: Seq[OntologyTerm] = Seq(), circular: Option[Boolean] = None, attributes: Map[String, String] = Map()) extends Product with Serializable
Linear Supertypes
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Inherited
- Feature
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- Product
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Visibility
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Instance Constructors
- new Feature(featureId: Option[String] = None, sampleId: Option[String] = None, name: Option[String] = None, source: Option[String] = None, featureType: Option[String] = None, referenceName: Option[String] = None, start: Option[Long] = None, end: Option[Long] = None, strand: Option[String] = None, phase: Option[Int] = None, frame: Option[Int] = None, score: Option[Double] = None, geneId: Option[String] = None, transcriptId: Option[String] = None, exonId: Option[String] = None, aliases: Seq[String] = Seq(), parentIds: Seq[String] = Seq(), target: Option[String] = None, gap: Option[String] = None, derivesFrom: Option[String] = None, notes: Seq[String] = Seq(), dbxrefs: Seq[Dbxref] = Seq(), ontologyTerms: Seq[OntologyTerm] = Seq(), circular: Option[Boolean] = None, attributes: Map[String, String] = Map())
Value Members
-
final
def
!=(arg0: Any): Boolean
- Definition Classes
- AnyRef → Any
-
final
def
##(): Int
- Definition Classes
- AnyRef → Any
-
final
def
==(arg0: Any): Boolean
- Definition Classes
- AnyRef → Any
- val aliases: Seq[String]
-
final
def
asInstanceOf[T0]: T0
- Definition Classes
- Any
- val attributes: Map[String, String]
-
def
canEqual(that: Any): Boolean
- Definition Classes
- Feature → Equals
- val circular: Option[Boolean]
-
def
clone(): AnyRef
- Attributes
- protected[lang]
- Definition Classes
- AnyRef
- Annotations
- @throws( ... ) @native() @HotSpotIntrinsicCandidate()
- val dbxrefs: Seq[Dbxref]
- val derivesFrom: Option[String]
- val end: Option[Long]
-
final
def
eq(arg0: AnyRef): Boolean
- Definition Classes
- AnyRef
- val exonId: Option[String]
- val featureId: Option[String]
- val featureType: Option[String]
- val frame: Option[Int]
- val gap: Option[String]
- val geneId: Option[String]
-
final
def
getClass(): Class[_]
- Definition Classes
- AnyRef → Any
- Annotations
- @native() @HotSpotIntrinsicCandidate()
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final
def
isInstanceOf[T0]: Boolean
- Definition Classes
- Any
- val name: Option[String]
-
final
def
ne(arg0: AnyRef): Boolean
- Definition Classes
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- val notes: Seq[String]
-
final
def
notify(): Unit
- Definition Classes
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- Annotations
- @native() @HotSpotIntrinsicCandidate()
-
final
def
notifyAll(): Unit
- Definition Classes
- AnyRef
- Annotations
- @native() @HotSpotIntrinsicCandidate()
- val ontologyTerms: Seq[OntologyTerm]
- val parentIds: Seq[String]
- val phase: Option[Int]
-
def
productArity: Int
- Definition Classes
- Feature → Product
-
def
productElement(i: Int): Any
- Definition Classes
- Feature → Product
- val referenceName: Option[String]
- val sampleId: Option[String]
- val score: Option[Double]
- val source: Option[String]
- val start: Option[Long]
- val strand: Option[String]
-
final
def
synchronized[T0](arg0: ⇒ T0): T0
- Definition Classes
- AnyRef
- val target: Option[String]
- def toAvro: formats.avro.Feature
- val transcriptId: Option[String]
-
final
def
wait(arg0: Long, arg1: Int): Unit
- Definition Classes
- AnyRef
- Annotations
- @throws( ... )
-
final
def
wait(arg0: Long): Unit
- Definition Classes
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- Annotations
- @throws( ... ) @native()
-
final
def
wait(): Unit
- Definition Classes
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- Annotations
- @throws( ... )
Deprecated Value Members
-
def
finalize(): Unit
- Attributes
- protected[lang]
- Definition Classes
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- Annotations
- @throws( classOf[java.lang.Throwable] ) @Deprecated @deprecated
- Deprecated
(Since version ) see corresponding Javadoc for more information.