object ReadDataset
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def
apply(rdd: RDD[Read], sd: SequenceDictionary): ReadDataset
Builds a ReadDataset given a sequence dictionary.
Builds a ReadDataset given a sequence dictionary.
- rdd
The underlying Read RDD to build from.
- sd
The sequence dictionary for this ReadDataset.
- returns
Returns a new ReadDataset.
-
def
apply(rdd: RDD[Read]): ReadDataset
Builds a ReadDataset with an empty sequence dictionary.
Builds a ReadDataset with an empty sequence dictionary.
- rdd
The underlying Read RDD to build from.
- returns
Returns a new ReadDataset.
-
def
apply(ds: Dataset[Read], sequences: SequenceDictionary): ReadDataset
A genomic dataset that wraps a dataset of Read data.
A genomic dataset that wraps a dataset of Read data.
- ds
A Dataset of genomic Reads.
- sequences
The reference genome these data are aligned to.
-
def
apply(ds: Dataset[Read]): ReadDataset
A genomic dataset that wraps a dataset of Read data.
A genomic dataset that wraps a dataset of Read data.
- ds
A Dataset of genomic Reads.
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(Since version ) see corresponding Javadoc for more information.