o

org.bdgenomics.adam.projections

VariantAnnotationField

object VariantAnnotationField extends FieldEnumeration

Linear Supertypes
FieldEnumeration, Enumeration, Serializable, Serializable, AnyRef, Any
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Inherited
  1. VariantAnnotationField
  2. FieldEnumeration
  3. Enumeration
  4. Serializable
  5. Serializable
  6. AnyRef
  7. Any
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Visibility
  1. Public
  2. All

Type Members

  1. class SchemaVal extends Val with FieldValue

    An enumerated field that is part of this schema.

    An enumerated field that is part of this schema.

    Definition Classes
    FieldEnumeration
  2. class Val extends Value with Serializable
    Attributes
    protected
    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID()
  3. abstract class Value extends Ordered[Value] with Serializable
    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID()
  4. class ValueSet extends AbstractSet[Value] with SortedSet[Value] with SortedSetLike[Value, ValueSet] with Serializable
    Definition Classes
    Enumeration

Value Members

  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  4. final def SchemaValue: SchemaVal
    Attributes
    protected
    Definition Classes
    FieldEnumeration
  5. final def Value(i: Int, name: String): Value
    Attributes
    protected
    Definition Classes
    Enumeration
  6. final def Value(name: String): Value
    Attributes
    protected
    Definition Classes
    Enumeration
  7. final def Value(i: Int): Value
    Attributes
    protected
    Definition Classes
    Enumeration
  8. final def Value: Value
    Attributes
    protected
    Definition Classes
    Enumeration
  9. val alleleCount: SchemaVal
  10. val alleleFrequency: SchemaVal
  11. val ancestralAllele: SchemaVal
  12. final def apply(x: Int): Value
    Definition Classes
    Enumeration
  13. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  14. val attributes: SchemaVal
  15. val cigar: SchemaVal
  16. def clone(): AnyRef
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native() @HotSpotIntrinsicCandidate()
  17. val dbSnp: SchemaVal
  18. final def eq(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  19. def equals(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  20. val forwardReadDepth: SchemaVal
  21. final def getClass(): Class[_]
    Definition Classes
    AnyRef → Any
    Annotations
    @native() @HotSpotIntrinsicCandidate()
  22. val hapMap2: SchemaVal
  23. val hapMap3: SchemaVal
  24. def hashCode(): Int
    Definition Classes
    AnyRef → Any
    Annotations
    @native() @HotSpotIntrinsicCandidate()
  25. final def isInstanceOf[T0]: Boolean
    Definition Classes
    Any
  26. final def maxId: Int
    Definition Classes
    Enumeration
  27. final def ne(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  28. var nextId: Int
    Attributes
    protected
    Definition Classes
    Enumeration
  29. var nextName: Iterator[String]
    Attributes
    protected
    Definition Classes
    Enumeration
  30. final def notify(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native() @HotSpotIntrinsicCandidate()
  31. final def notifyAll(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native() @HotSpotIntrinsicCandidate()
  32. val readDepth: SchemaVal
  33. def readResolve(): AnyRef
    Attributes
    protected
    Definition Classes
    Enumeration
  34. val recordSchema: Schema
    Definition Classes
    FieldEnumeration
  35. val referenceForwardReadDepth: SchemaVal
  36. val referenceReadDepth: SchemaVal
  37. val referenceReverseReadDepth: SchemaVal
  38. val reverseReadDepth: SchemaVal
  39. val somatic: SchemaVal
  40. final def synchronized[T0](arg0: ⇒ T0): T0
    Definition Classes
    AnyRef
  41. val thousandGenomes: SchemaVal
  42. def toString(): String
    Definition Classes
    Enumeration → AnyRef → Any
  43. val transcriptEffects: SchemaVal
  44. val validated: SchemaVal
  45. def values: ValueSet
    Definition Classes
    Enumeration
  46. final def wait(arg0: Long, arg1: Int): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  47. final def wait(arg0: Long): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  48. final def wait(): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  49. final def withName(s: String): Value
    Definition Classes
    Enumeration

Deprecated Value Members

  1. def finalize(): Unit
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] ) @Deprecated @deprecated
    Deprecated

    (Since version ) see corresponding Javadoc for more information.

Inherited from FieldEnumeration

Inherited from Enumeration

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

Ungrouped