case class TranscriptEffect(alternateAllele: Option[String] = None, effects: Seq[String] = Seq(), geneName: Option[String] = None, geneId: Option[String] = None, featureType: Option[String] = None, featureId: Option[String] = None, biotype: Option[String] = None, rank: Option[Int] = None, total: Option[Int] = None, genomicHgvs: Option[String] = None, transcriptHgvs: Option[String] = None, proteinHgvs: Option[String] = None, cdnaPosition: Option[Int] = None, cdnaLength: Option[Int] = None, cdsPosition: Option[Int] = None, cdsLength: Option[Int] = None, proteinPosition: Option[Int] = None, proteinLength: Option[Int] = None, distance: Option[Int] = None, messages: Seq[String] = Seq()) extends Product with Serializable

Linear Supertypes
Serializable, Serializable, Product, Equals, AnyRef, Any
Ordering
  1. Alphabetic
  2. By Inheritance
Inherited
  1. TranscriptEffect
  2. Serializable
  3. Serializable
  4. Product
  5. Equals
  6. AnyRef
  7. Any
  1. Hide All
  2. Show All
Visibility
  1. Public
  2. All

Instance Constructors

  1. new TranscriptEffect(alternateAllele: Option[String] = None, effects: Seq[String] = Seq(), geneName: Option[String] = None, geneId: Option[String] = None, featureType: Option[String] = None, featureId: Option[String] = None, biotype: Option[String] = None, rank: Option[Int] = None, total: Option[Int] = None, genomicHgvs: Option[String] = None, transcriptHgvs: Option[String] = None, proteinHgvs: Option[String] = None, cdnaPosition: Option[Int] = None, cdnaLength: Option[Int] = None, cdsPosition: Option[Int] = None, cdsLength: Option[Int] = None, proteinPosition: Option[Int] = None, proteinLength: Option[Int] = None, distance: Option[Int] = None, messages: Seq[String] = Seq())

Value Members

  1. final def !=(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  2. final def ##(): Int
    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean
    Definition Classes
    AnyRef → Any
  4. val alternateAllele: Option[String]
  5. final def asInstanceOf[T0]: T0
    Definition Classes
    Any
  6. val biotype: Option[String]
  7. def canEqual(that: Any): Boolean
    Definition Classes
    TranscriptEffect → Equals
  8. val cdnaLength: Option[Int]
  9. val cdnaPosition: Option[Int]
  10. val cdsLength: Option[Int]
  11. val cdsPosition: Option[Int]
  12. def clone(): AnyRef
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native() @HotSpotIntrinsicCandidate()
  13. val distance: Option[Int]
  14. val effects: Seq[String]
  15. final def eq(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  16. val featureId: Option[String]
  17. val featureType: Option[String]
  18. val geneId: Option[String]
  19. val geneName: Option[String]
  20. val genomicHgvs: Option[String]
  21. final def getClass(): Class[_]
    Definition Classes
    AnyRef → Any
    Annotations
    @native() @HotSpotIntrinsicCandidate()
  22. final def isInstanceOf[T0]: Boolean
    Definition Classes
    Any
  23. val messages: Seq[String]
  24. final def ne(arg0: AnyRef): Boolean
    Definition Classes
    AnyRef
  25. final def notify(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native() @HotSpotIntrinsicCandidate()
  26. final def notifyAll(): Unit
    Definition Classes
    AnyRef
    Annotations
    @native() @HotSpotIntrinsicCandidate()
  27. def productArity: Int
    Definition Classes
    TranscriptEffect → Product
  28. def productElement(i: Int): Any
    Definition Classes
    TranscriptEffect → Product
  29. val proteinHgvs: Option[String]
  30. val proteinLength: Option[Int]
  31. val proteinPosition: Option[Int]
  32. val rank: Option[Int]
  33. final def synchronized[T0](arg0: ⇒ T0): T0
    Definition Classes
    AnyRef
  34. def toAvro: formats.avro.TranscriptEffect
  35. val total: Option[Int]
  36. val transcriptHgvs: Option[String]
  37. final def wait(arg0: Long, arg1: Int): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  38. final def wait(arg0: Long): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... ) @native()
  39. final def wait(): Unit
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Deprecated Value Members

  1. def finalize(): Unit
    Attributes
    protected[lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] ) @Deprecated @deprecated
    Deprecated

    (Since version ) see corresponding Javadoc for more information.

Inherited from Serializable

Inherited from Serializable

Inherited from Product

Inherited from Equals

Inherited from AnyRef

Inherited from Any

Ungrouped