object ReadGroup extends Serializable
Singleton object for creating ReaGroups.
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def
apply(samRGR: SAMReadGroupRecord): ReadGroup
Converts a SAMReadGroupRecord into a ReadGroup.
Converts a SAMReadGroupRecord into a ReadGroup.
- samRGR
SAMReadGroupRecord to convert.
- returns
Returns an equivalent ADAM format read group.
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def
fromAvro(readGroup: formats.avro.ReadGroup): ReadGroup
Converts the Avro ReadGroup record into a model ReadGroup.
Converts the Avro ReadGroup record into a model ReadGroup.
Although the ReadGroup class is serializable, when saving the record to disk, we want to save it as Avro. This method allows us to go from the Avro format which we use on disk into the class we use in memory.
- readGroup
ReadGroup record loaded from disk.
- returns
Avro record converted into ReadGroup representation.
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(Since version ) see corresponding Javadoc for more information.