Class

org.bdgenomics.adam.cli

TransformSequencesArgs

Related Doc: package cli

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class TransformSequencesArgs extends Args4jBase with ParquetSaveArgs

Linear Supertypes
ParquetSaveArgs, SaveArgs, ParquetArgs, ParquetRDDArgs, Args4jBase, AnyRef, Any
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Inherited
  1. TransformSequencesArgs
  2. ParquetSaveArgs
  3. SaveArgs
  4. ParquetArgs
  5. ParquetRDDArgs
  6. Args4jBase
  7. AnyRef
  8. Any
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Visibility
  1. Public
  2. All

Instance Constructors

  1. new TransformSequencesArgs()

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Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any
  3. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  4. var alphabet: String

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  5. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any
  6. var blockSize: Int

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    Definition Classes
    ParquetArgs → ParquetRDDArgs
  7. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  8. var compressionCodec: CompressionCodecName

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    Definition Classes
    ParquetArgs → ParquetRDDArgs
  9. var createReference: Boolean

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  10. var disableDictionaryEncoding: Boolean

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    Definition Classes
    ParquetArgs → ParquetRDDArgs
  11. var disableFastConcat: Boolean

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  12. var doPrintUsage: Boolean

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    Definition Classes
    Args4jBase
  13. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  14. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  15. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  16. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any
  17. def hashCode(): Int

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    Definition Classes
    AnyRef → Any
  18. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any
  19. var logLevel: String

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    Definition Classes
    ParquetArgs
  20. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  21. final def notify(): Unit

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    Definition Classes
    AnyRef
  22. final def notifyAll(): Unit

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    Definition Classes
    AnyRef
  23. var outputPath: String

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    Definition Classes
    TransformSequencesArgs → SaveArgs
  24. var pageSize: Int

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    Definition Classes
    ParquetArgs → ParquetRDDArgs
  25. var printMetrics: Boolean

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    Definition Classes
    Args4jBase
  26. var sequencesFile: String

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  27. var single: Boolean

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  28. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef
  29. def toString(): String

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    Definition Classes
    AnyRef → Any
  30. final def wait(): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  31. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  32. final def wait(arg0: Long): Unit

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    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from ParquetSaveArgs

Inherited from SaveArgs

Inherited from ParquetArgs

Inherited from ParquetRDDArgs

Inherited from Args4jBase

Inherited from AnyRef

Inherited from Any

Ungrouped