bin/wasp2-analyze
bin/wasp2-count
bin/wasp2-ipscore
bin/wasp2-map
lib/python3.11/site-packages/LICENSE
lib/python3.11/site-packages/README.md
lib/python3.11/site-packages/analysis/__init__.py
lib/python3.11/site-packages/analysis/__main__.py
lib/python3.11/site-packages/analysis/__pycache__/__init__.cpython-311.pyc
lib/python3.11/site-packages/analysis/__pycache__/__main__.cpython-311.pyc
lib/python3.11/site-packages/analysis/__pycache__/as_analysis.cpython-311.pyc
lib/python3.11/site-packages/analysis/__pycache__/as_analysis_sc.cpython-311.pyc
lib/python3.11/site-packages/analysis/__pycache__/compare_ai.cpython-311.pyc
lib/python3.11/site-packages/analysis/__pycache__/count_alleles.cpython-311.pyc
lib/python3.11/site-packages/analysis/__pycache__/count_alleles_sc.cpython-311.pyc
lib/python3.11/site-packages/analysis/__pycache__/filter_data.cpython-311.pyc
lib/python3.11/site-packages/analysis/__pycache__/run_analysis.cpython-311.pyc
lib/python3.11/site-packages/analysis/__pycache__/run_analysis_sc.cpython-311.pyc
lib/python3.11/site-packages/analysis/__pycache__/run_compare_ai.cpython-311.pyc
lib/python3.11/site-packages/analysis/as_analysis.py
lib/python3.11/site-packages/analysis/as_analysis_sc.py
lib/python3.11/site-packages/analysis/compare_ai.py
lib/python3.11/site-packages/analysis/count_alleles.py
lib/python3.11/site-packages/analysis/count_alleles_sc.py
lib/python3.11/site-packages/analysis/filter_data.py
lib/python3.11/site-packages/analysis/run_analysis.py
lib/python3.11/site-packages/analysis/run_analysis_sc.py
lib/python3.11/site-packages/analysis/run_compare_ai.py
lib/python3.11/site-packages/counting/__init__.py
lib/python3.11/site-packages/counting/__main__.py
lib/python3.11/site-packages/counting/__pycache__/__init__.cpython-311.pyc
lib/python3.11/site-packages/counting/__pycache__/__main__.cpython-311.pyc
lib/python3.11/site-packages/counting/__pycache__/count_alleles.cpython-311.pyc
lib/python3.11/site-packages/counting/__pycache__/count_alleles_sc.cpython-311.pyc
lib/python3.11/site-packages/counting/__pycache__/filter_variant_data.cpython-311.pyc
lib/python3.11/site-packages/counting/__pycache__/parse_gene_data.cpython-311.pyc
lib/python3.11/site-packages/counting/__pycache__/run_counting.cpython-311.pyc
lib/python3.11/site-packages/counting/__pycache__/run_counting_sc.cpython-311.pyc
lib/python3.11/site-packages/counting/count_alleles.py
lib/python3.11/site-packages/counting/count_alleles_sc.py
lib/python3.11/site-packages/counting/filter_variant_data.py
lib/python3.11/site-packages/counting/parse_gene_data.py
lib/python3.11/site-packages/counting/run_counting.py
lib/python3.11/site-packages/counting/run_counting_sc.py
lib/python3.11/site-packages/ipscore/__init__.py
lib/python3.11/site-packages/ipscore/__main__.py
lib/python3.11/site-packages/ipscore/__pycache__/__init__.cpython-311.pyc
lib/python3.11/site-packages/ipscore/__pycache__/__main__.cpython-311.pyc
lib/python3.11/site-packages/ipscore/__pycache__/constants.cpython-311.pyc
lib/python3.11/site-packages/ipscore/__pycache__/data_inventory.cpython-311.pyc
lib/python3.11/site-packages/ipscore/__pycache__/qtl_loader.cpython-311.pyc
lib/python3.11/site-packages/ipscore/__pycache__/sample_manifest.cpython-311.pyc
lib/python3.11/site-packages/ipscore/constants.py
lib/python3.11/site-packages/ipscore/data_inventory.py
lib/python3.11/site-packages/ipscore/qtl_loader.py
lib/python3.11/site-packages/ipscore/sample_manifest.py
lib/python3.11/site-packages/mapping/__init__.py
lib/python3.11/site-packages/mapping/__main__.py
lib/python3.11/site-packages/mapping/__pycache__/__init__.cpython-311.pyc
lib/python3.11/site-packages/mapping/__pycache__/__main__.cpython-311.pyc
lib/python3.11/site-packages/mapping/__pycache__/filter_remap_reads.cpython-311.pyc
lib/python3.11/site-packages/mapping/__pycache__/intersect_variant_data.cpython-311.pyc
lib/python3.11/site-packages/mapping/__pycache__/make_remap_reads.cpython-311.pyc
lib/python3.11/site-packages/mapping/__pycache__/remap_utils.cpython-311.pyc
lib/python3.11/site-packages/mapping/__pycache__/remap_utils_optimized.cpython-311.pyc
lib/python3.11/site-packages/mapping/__pycache__/run_mapping.cpython-311.pyc
lib/python3.11/site-packages/mapping/__pycache__/wasp_data_files.cpython-311.pyc
lib/python3.11/site-packages/mapping/filter_remap_reads.py
lib/python3.11/site-packages/mapping/intersect_variant_data.py
lib/python3.11/site-packages/mapping/make_remap_reads.py
lib/python3.11/site-packages/mapping/remap_utils.py
lib/python3.11/site-packages/mapping/remap_utils_optimized.py
lib/python3.11/site-packages/mapping/run_mapping.py
lib/python3.11/site-packages/mapping/wasp_data_files.py
lib/python3.11/site-packages/wasp2-1.4.0.dist-info/INSTALLER
lib/python3.11/site-packages/wasp2-1.4.0.dist-info/METADATA
lib/python3.11/site-packages/wasp2-1.4.0.dist-info/RECORD
lib/python3.11/site-packages/wasp2-1.4.0.dist-info/REQUESTED
lib/python3.11/site-packages/wasp2-1.4.0.dist-info/WHEEL
lib/python3.11/site-packages/wasp2-1.4.0.dist-info/direct_url.json
lib/python3.11/site-packages/wasp2-1.4.0.dist-info/entry_points.txt
lib/python3.11/site-packages/wasp2-1.4.0.dist-info/licenses/LICENSE
lib/python3.11/site-packages/wasp2-1.4.0.dist-info/sboms/wasp2.cyclonedx.json
lib/python3.11/site-packages/wasp2/__init__.py
lib/python3.11/site-packages/wasp2/__pycache__/__init__.cpython-311.pyc
lib/python3.11/site-packages/wasp2/__pycache__/cli.cpython-311.pyc
lib/python3.11/site-packages/wasp2/cli.py
lib/python3.11/site-packages/wasp2/io/__init__.py
lib/python3.11/site-packages/wasp2/io/__pycache__/__init__.cpython-311.pyc
lib/python3.11/site-packages/wasp2/io/__pycache__/compat.cpython-311.pyc
lib/python3.11/site-packages/wasp2/io/__pycache__/cyvcf2_source.cpython-311.pyc
lib/python3.11/site-packages/wasp2/io/__pycache__/pgen_source.cpython-311.pyc
lib/python3.11/site-packages/wasp2/io/__pycache__/variant_source.cpython-311.pyc
lib/python3.11/site-packages/wasp2/io/__pycache__/vcf_source.cpython-311.pyc
lib/python3.11/site-packages/wasp2/io/compat.py
lib/python3.11/site-packages/wasp2/io/cyvcf2_source.py
lib/python3.11/site-packages/wasp2/io/pgen_source.py
lib/python3.11/site-packages/wasp2/io/variant_source.py
lib/python3.11/site-packages/wasp2/io/vcf_source.py
lib/python3.11/site-packages/wasp2_rust/__init__.py
lib/python3.11/site-packages/wasp2_rust/__init__.pyi
lib/python3.11/site-packages/wasp2_rust/__pycache__/__init__.cpython-311.pyc
lib/python3.11/site-packages/wasp2_rust/wasp2_rust.cpython-311-x86_64-linux-gnu.so
