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___peptideProphet___ ___END___ ___INTERPROPHET___ ___END___
Sorting:   desc  asc
PeptideProphet:  min max
iProphet:  min max
    pepXML file:
__sampleEnzyme__ digest, __searchEngine__ search engine, quantitation: __quantitationList__
displaying __numSubsetSpectra__ of __totalNumSpectra__ total spectra, page __page__ of __totalPages__
__numUniquePeptides__ unique peptides, __numUniqueStrippedPeptides__ unique stripped peptides, __numUniqueProteins__ unique proteins, __numSingleHitProteins__ single hits ___exportedSpreadsheet___
exported spreadsheet to __spreadsheetFileName__ ___END___
PepXML Viewer, 2006-2016 SPC/ISB

currently displaying: __statusPerPage__ rows per page, sorting by __statusSortField__ (__statusSortDir__), highlighted peptide text: __statusHighlightedPeptideText__, highlighted protein text: __statusHighlightedProteinText__, highlighted spectrum text: __statusHighlightedSpectrumText__, multiple protein hits as __statusExpandProteins__ ___libra___ , displaying __statusLibraValues__ libra values ___END___ .

___asapratio___ ___END___ ___libra___ ___END___
  • rows per page:
rows per page
  • Sorting:
descending     ascending
  • hilight peptide text (regex):
include modification (subscript) text:
  • hilight protein text (regex):
  • hilight spectrum text (regex):
  • ASAPRatio ratio display:
low to high high to low
  • libra values:
absolute normalized
  • multiple protein hits:
top hit only list of all hits
  • column headers:
regular condensed

select the columns you want to display.
If you want to change the order that the columns are displayed, highlight the column and use the up / down buttons.

undisplayed columns:






columns to display:


__statusFilteringSummary__ ___INTERPROPHET___ ___END___ ___MASCOT___ ___END___ ___SEQUEST___ ___END___ ___PROBID___ ___END___ ___COMET___ ___END___ ___XTANDEM___ ___END___ ___PHENYX___ ___END___ ___MYRIMATCH___ ___END___ ___MS-GF+___ ___END___ ___OMSSA___ ___END___ ___PROTEINPROSPECTOR___ ___END___ ___PLINK___ ___END___ ___KOJAK___ ___END___ ___SPECTRAST___ ___END___ ___INTERPROPHET___ ___END___ ___peptideProphet___ ___END___ ___asapratio___ ___END___ ___xpress___ ___END___ ___xpressANDasapratio___ ___END___
  • require peptide aa's:
  • require glycosylation motif (NxS/T) in peptides:
        include B in glycosylation motif as (N or B)xS/T :
  • required peptide text (regex allowed):
        include modification (subscript) text:
  • required protein text (regex allowed):
  • required spectrum text (regex allowed):
  • Number of tolerable enzymatic terminii (NTT):
min:     max:
  • Number of missed enzymatic cleavages (NMC):
min:     max:
  • exclude charges:
1+     2+     3+     Others
ionScore: min:
require ionscore > identityscore:
require ionscore > homologyscore:
+1:     min xcorr:     min deltacn:     max sprank:
+2:     min xcorr:     min deltacn:     max sprank:
+3:     min xcorr:     min deltacn:     max sprank:
min bays score: max bays score:
min zscore: max zscore:
+1:     min xcorr:     min deltacn:     max sprank:
+2:     min xcorr:     min deltacn:     max sprank:
+3:     min xcorr:     min deltacn:     max sprank:
min expect:     max expect:
hyperscore: min:     max:
nextscore: min:     max:
bscore: min:     max:
yscore: min:     max:
expect: min:     max:
min zscore: max zscore:
min origScore: max origScore:
mvh: min:     max:
xcorr: min:     max:
mz fidelity: min:     max:
Evalue: min:     max:
SpecEValue: min:     max:
raw: min:     max:
denovo: min:     max:
Isotope Error: min:     max:
pvalue: min:     max:
expect: min:     max:
expect: min:     max:
score: min:     max:
score diff: min:     max:
score: min:     max:
xlink type:
kojak score: min:     max:
delta score: min:     max:
ppm error: min:     max:
xlink type:
dot: min:     max:
delta dot: min:     max:
dot bias: min:     max:
mz_diff: min:     max:
  • iProphet Probability:
min:     max:
nrs: min:     max:
nsi: min:     max:
nsm: min:     max:
nss: min:     max:
nse: min:     max:
nsp: min:     max:
fpkm: min:     max:
top cat: min:     max:
  • PeptideProphet Probability:
min:     max:
  • ASAPRatio quantitation:
ASAP Ratio: min:     max:
require valid ASAP Ratio:
  • XPRESS quantitation:
XPRESS Ratio: min:     max:
require valid XPRESS Ratio:
required peak area: min:
  • Require XPRESS ratio within ASAPRatio mean ± error:

            __firstPageLink__ __prevPageLink__ __pageSelectionList__ __nextPageLink__ __lastPageLink__

__tableColumnHeaders__ __tableDataRows__

jump to __firstPageLink__ __prevPageLink__ __pageSelectionList__ __nextPageLink__ __lastPageLink__

PepXML Viewer: __xmlFileName__
This program displays peptide data stored in PepXML files.
Developed at Institute for Systems Biology / Seattle Proteome Center
version: __TPPVersionInfo__

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