Nextflow workflow report

[${workflow.runName}] ${workflow.resume ? '(resumed run)' : ''}

<% if (workflow.success){ out << """
Workflow execution completed successfully!
""" } else { out << """

Workflow execution completed unsuccessfully!

The exit status of the task that caused the workflow execution to fail was: ${workflow.exitStatus}.

The full error message was:

${workflow.errorReport}
""" } %>
Run times
${workflow.start} - ${workflow.complete} (duration: ${workflow.duration})
Nextflow command
${workflow.commandLine}
CPU-Hours
${workflow.stats.getComputeTimeString()}
Launch directory
${workflow.launchDir}
Work directory
${workflow.workDir.toUriString()}
Project directory
${workflow.projectDir}
<% if (workflow.scriptName) { out << """
Script name
${workflow.scriptName}
""" } %> <% if (workflow.scriptId) { out << """
Script ID
${workflow.scriptId}
""" } %> <% if (workflow.repository) { out << """
Workflow repository
${workflow.repository}, revision ${workflow.revision} (commit hash ${workflow.commitId})
""" } %>
Workflow profile
${workflow.profile}
<% if (workflow.container) { out << """
Workflow container
${workflow.container}
Container engine
${workflow.containerEngine?:'-'}
""" } %>
Nextflow version
version ${workflow.nextflow.version}, build ${workflow.nextflow.build} (${workflow.nextflow.timestamp})
Session ID
${workflow.sessionId}

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU Usage

Memory Usage

Job Duration

Disk Read / Write

Number of bytes directly read from disk added to the number of bytes the process originally dirtied in the page-cache for each process.

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

task_id process tag status hash allocated cpus %cpu allocated memory (bytes) %mem vmem rss peak_vmem peak_rss allocated time (mins) duration (mins) realtime (mins) script exit submit start complete rchar wchar syscr syscw read_bytes write_bytes native_id name module container disk attempt scratch workdir