${arg.summary}
${arg.fulltext}
Dependency: This argument requires that you also specify ${arg.otherArgumentRequired}
.
Exclusion: This argument cannot be used at the same time as ${arg.exclusiveOf}
.
The ${arg.name} argument is an enumerated type (${arg.type}), which can have one of the following values:
<#if arg.required != "NA"> <#if arg.required == "yes"> R #if> #if> ${arg.type} <#if arg.defaultValue?has_content> ${arg.defaultValue} #if> <#if arg.minValue?is_number> [ [ ${arg.minValue} #if> <#if arg.minRecValue?is_number> [ ${arg.minRecValue} #if> <#if arg.maxRecValue?is_number> ${arg.maxRecValue} ] #if> <#if arg.maxValue?is_number> ${arg.maxValue} ] ] #if>
#macro> <#macro relatedByType name type> <#list relatedDocs as relatedDoc> <#if relatedDoc.relation == type>${summary}
<#if group?? >This Test Plugin is automatically applied to the data by the Engine before processing by ${name}.
#if> <#if (testPlugin?size > 1) >These Test Plugins are automatically applied to the data by the Engine before processing by ${name}.
#if>See these additional references for more information.
This table summarizes the command-line arguments that are specific to this tool. For more details on each argument, see the list further down below the table or click on an argument name to jump directly to that entry in the list.
Argument name(s) | Default value | Summary |
---|
Arguments in this list are specific to this tool. Keep in mind that other arguments are available that are shared with other tools (e.g. command-line GATK arguments); see Inherited arguments above.
<#list arguments.all as arg> <@argumentDetails arg=arg/> #list> #if> <@footerInfo /> <@footerClose />