../firstrun/newGeneCopies/NEURL3/NEURL3_partitions/NEURL3_group1.fasta	../firstrun/newGeneCopies/NEURL3/NEURL3_partitions/NEURL3_group1_NEURL3.fasta	NEURL3,
../firstrun/newGeneCopies/RPS9/RPS9_partitions/RPS9_group4.fasta	../firstrun/newGeneCopies/RPS9/RPS9_partitions/RPS9_group4_RPS9OOOAC010492v2OOOAC010492v4.fasta	AC010492.2,AC011515.2,XXbac-BCX105G6.11,RNU6-1307P,XXbac-BPG111L9.8,CTB-83J4.1,AC010492.5,LILRB4,LILRB1,AC012314.20,AC012314.19,LILRB3,U6,XXbac-BPG111L9.11,LILRA2,XXbac-BCX105G6.12,XXbac-BPG637J10.3,AC010492.4,LILRA6,LILRB5,RPS9,LILRB1-AS1,LILRB2,MIR4752,
../firstrun/newGeneCopies/TBC1D16/TBC1D16_partitions/TBC1D16_group1.fasta	../firstrun/newGeneCopies/TBC1D16/TBC1D16_partitions/TBC1D16_group1_TBC1D16OOOCCDC40OOOCTD-2529O21v1.fasta	RP11-353N14.7,CTD-2529O21.2,CTD-2529O21.1,TBC1D16,CCDC40,
../firstrun/newGeneCopies/DHCR7/DHCR7_partitions/DHCR7_group1.fasta	../firstrun/newGeneCopies/DHCR7/DHCR7_partitions/DHCR7_group1_DHCR7OOONADSYN1OOORP11-660L16v2.fasta	DHCR7,NADSYN1,RP11-660L16.2,
../firstrun/newGeneCopies/PRMT5/PRMT5_partitions/PRMT5_group2.fasta	../firstrun/newGeneCopies/PRMT5/PRMT5_partitions/PRMT5_group2_PRMT5OOOPRMT5-AS1OOORBM23.fasta	PRMT5,PRMT5-AS1,RBM23,RP11-298I3.1,
../firstrun/newGeneCopies/PIM3/PIM3_partitions/PIM3_group1.fasta	../firstrun/newGeneCopies/PIM3/PIM3_partitions/PIM3_group1_PIM3OOOMIR6821.fasta	PIM3,MIR6821,
../firstrun/newGeneCopies/HDHD2/HDHD2_partitions/HDHD2_group1.fasta	../firstrun/newGeneCopies/HDHD2/HDHD2_partitions/HDHD2_group1_HDHD2OOOIER3IP1OOORP11-49K24v5.fasta	RP11-49K24.8,RP11-49K24.5,IER3IP1,HDHD2,RP11-49K24.6,
../firstrun/newGeneCopies/MPV17L/MPV17L_partitions/MPV17L_group1.fasta	../firstrun/newGeneCopies/MPV17L/MPV17L_partitions/MPV17L_group1_MPV17LOOOPDXDC2POOOPDXDC2P-NPIPB14P.fasta	MPV17L,RP11-231C14.10,RP11-1021N1.1,SULT1A1,RP11-666O2.7,PDXDC2P,PDXDC2P-NPIPB14P,
../firstrun/newGeneCopies/MPV17L/MPV17L_partitions/MPV17L_group14.fasta	../firstrun/newGeneCopies/MPV17L/MPV17L_partitions/MPV17L_group14_MPV17L2OOORAB3A.fasta	RAB3A,MPV17L2,
../firstrun/newGeneCopies/TPCN2/TPCN2_partitions/TPCN2_group1.fasta	../firstrun/newGeneCopies/TPCN2/TPCN2_partitions/TPCN2_group1_TPCN2OOOMIR3164OOORP11-554A11v11.fasta	RP11-554A11.7,MIR3164,RP11-554A11.11,TPCN2,
../firstrun/newGeneCopies/XAGE1/XAGE1_partitions/XAGE1_group1.fasta	../firstrun/newGeneCopies/XAGE1/XAGE1_partitions/XAGE1_group1_XAGE1AOOOXAGE1BOOORBM22P7.fasta	XAGE1A,XAGE1B,RBM22P7,
../firstrun/newGeneCopies/BANF1/BANF1_partitions/BANF1_group6.fasta	../firstrun/newGeneCopies/BANF1/BANF1_partitions/BANF1_group6_BANF1OOOEIF1AD.fasta	BANF1,EIF1AD,
../firstrun/newGeneCopies/CELA3B/CELA3B_partitions/CELA3B_group1.fasta	../firstrun/newGeneCopies/CELA3B/CELA3B_partitions/CELA3B_group1_CELA3BOOOCELA3AOOORN7SL186P.fasta	RN7SL386P,RNU6-1022P,RNU6-776P,RP1-224A6.11,RN7SL186P,CELA3A,CELA3B,
../firstrun/newGeneCopies/CYP2D/CYP2D_partitions/CYP2D_group1.fasta	../firstrun/newGeneCopies/CYP2D/CYP2D_partitions/CYP2D_group1_CYP2D6OOOCYP2D7OOOCYP2D8P.fasta	ENSG00000281266,RP4-669P10.16,ENSG00000283089,RP4-669P10.19,ENSG00000282979,ENSG00000284297,RP4-669P10.20,ENSG00000282837,CYP2D7,ENSG00000281053,ENSG00000281908,ENSG00000284131,ENSG00000283373,CYP2D8P,SMDT1,NDUFA6-DT,ENSG00000282874,ENSG00000280705,ENSG00000282969,ENSG00000272000,ENSG00000281757,CYP2D6,
../firstrun/newGeneCopies/STK32C/STK32C_partitions/STK32C_group1.fasta	../firstrun/newGeneCopies/STK32C/STK32C_partitions/STK32C_group1_STK32COOODPYSL4OOOLRRC27.fasta	STK32C,LRRC27,DPYSL4,
../firstrun/newGeneCopies/VSX2/VSX2_partitions/VSX2_group1.fasta	../firstrun/newGeneCopies/VSX2/VSX2_partitions/VSX2_group1_VSX2.fasta	VSX2,
../firstrun/newGeneCopies/SERINC/SERINC_partitions/SERINC_group1.fasta	../firstrun/newGeneCopies/SERINC/SERINC_partitions/SERINC_group1_SERINC2.fasta	SERINC2,
../firstrun/newGeneCopies/SERINC/SERINC_partitions/SERINC_group8.fasta	../firstrun/newGeneCopies/SERINC/SERINC_partitions/SERINC_group8_SERINC4OOOHYPKOOOMFAP1.fasta	SERINC4,MIR1282,SERF2,MFAP1,HYPK,RP11-296A16.1,
../firstrun/newGeneCopies/YARS2/YARS2_partitions/YARS2_group1.fasta	../firstrun/newGeneCopies/YARS2/YARS2_partitions/YARS2_group1_YARS2OOODNM1LOOORP11-278C7v1.fasta	RP11-278C7.3,RP11-278C7.4,RP11-8P13.6,DNM1L,YARS2,RP11-278C7.5,RP11-278C7.1,
../firstrun/newGeneCopies/TVP23/TVP23_partitions/TVP23_group8.fasta	../firstrun/newGeneCopies/TVP23/TVP23_partitions/TVP23_group8_TVP23BOOOTVP23COOOTVP23C-CDRT4.fasta	RP11-385D13.3,CDRT4,CDRT1,PPIAP53,TVP23C-CDRT4,CTD-2145A24.5,TVP23C,FBXW10,TVP23B,
../firstrun/newGeneCopies/ZC4H2/ZC4H2_partitions/ZC4H2_group1.fasta	../firstrun/newGeneCopies/ZC4H2/ZC4H2_partitions/ZC4H2_group1_ZC4H2.fasta	ZC4H2,
../firstrun/newGeneCopies/ZC4H2/ZC4H2_partitions/ZC4H2_group2.fasta	../firstrun/newGeneCopies/ZC4H2/ZC4H2_partitions/ZC4H2_group2_ZC4H2.fasta	ZC4H2,
../firstrun/newGeneCopies/ZBTB47/ZBTB47_partitions/ZBTB47_group1.fasta	../firstrun/newGeneCopies/ZBTB47/ZBTB47_partitions/ZBTB47_group1_ZBTB47OOORP4-613B23v1OOORP4-613B23v8.fasta	RP4-613B23.1,RP4-613B23.8,ZBTB47,
../firstrun/newGeneCopies/PRG2/PRG2_partitions/PRG2_group1.fasta	../firstrun/newGeneCopies/PRG2/PRG2_partitions/PRG2_group1_PRG2OOORP11-872D17v8.fasta	PRG2,RP11-872D17.8,
../firstrun/newGeneCopies/CCNL2/CCNL2_partitions/CCNL2_group1.fasta	../firstrun/newGeneCopies/CCNL2/CCNL2_partitions/CCNL2_group1_CCNL2OOOMRPL20OOOMRPL20-AS1.fasta	MRPL20,CCNL2,MRPL20-AS1,
../firstrun/newGeneCopies/SNX27/SNX27_partitions/SNX27_group1.fasta	../firstrun/newGeneCopies/SNX27/SNX27_partitions/SNX27_group1_SNX27OOOCELF3OOORNU6-1062P.fasta	CELF3,RP11-98D18.1,RP11-404E16.1,RNU6-1062P,SNX27,
../firstrun/newGeneCopies/PDCD1/PDCD1_partitions/PDCD1_group1.fasta	../firstrun/newGeneCopies/PDCD1/PDCD1_partitions/PDCD1_group1_PDCD1.fasta	PDCD1,
../firstrun/newGeneCopies/TMEM54/TMEM54_partitions/TMEM54_group1.fasta	../firstrun/newGeneCopies/TMEM54/TMEM54_partitions/TMEM54_group1_TMEM54OOOHPCA.fasta	HPCA,TMEM54,
../firstrun/newGeneCopies/MIEF2/MIEF2_partitions/MIEF2_group1.fasta	../firstrun/newGeneCopies/MIEF2/MIEF2_partitions/MIEF2_group1_MIEF2OOOFLIIOOORP1-178F10v1.fasta	TOP3A,RP1-178F10.1,FLII,MIEF2,
../firstrun/newGeneCopies/COL6/COL6_partitions/COL6_group30.fasta	../firstrun/newGeneCopies/COL6/COL6_partitions/COL6_group30_COL6A1.fasta	COL6A1,
../firstrun/newGeneCopies/COL6/COL6_partitions/COL6_group31.fasta	../firstrun/newGeneCopies/COL6/COL6_partitions/COL6_group31_COL6A2OOOAP001471v1.fasta	AP001471.1,COL6A2,
../firstrun/newGeneCopies/REG4/REG4_partitions/REG4_group1.fasta	../firstrun/newGeneCopies/REG4/REG4_partitions/REG4_group1_REG4.fasta	REG4,
../firstrun/newGeneCopies/SPRED3/SPRED3_partitions/SPRED3_group1.fasta	../firstrun/newGeneCopies/SPRED3/SPRED3_partitions/SPRED3_group1_SPRED3OOOAC005789v9OOOGGN.fasta	SPRED3,GGN,AC005789.9,
../firstrun/newGeneCopies/TRIML1/TRIML1_partitions/TRIML1_group1.fasta	../firstrun/newGeneCopies/TRIML1/TRIML1_partitions/TRIML1_group1_TRIML1OOORP11-366H4v3.fasta	TRIML1,RP11-366H4.3,
../firstrun/newGeneCopies/LRWD1/LRWD1_partitions/LRWD1_group1.fasta	../firstrun/newGeneCopies/LRWD1/LRWD1_partitions/LRWD1_group1_LRWD1OOOAC004951v6OOOALKBH4.fasta	POLR2J,RP11-577H5.5,SPDYE1,ALKBH4,SPDYE2B,RP5-1022I14.2,AC004951.6,MIR5090,RP11-514P8.7,RP5-1165K10.2,POLR2J3,SPDYE2,RP11-514P8.10,POLR2J2,POLR2J4,RASA4,LRWD1,MIR4467,
../firstrun/newGeneCopies/TLR9/TLR9_partitions/TLR9_group1.fasta	../firstrun/newGeneCopies/TLR9/TLR9_partitions/TLR9_group1_TLR9OOORP11-330H6v5OOORP11-330H6v6.fasta	TWF2,TLR9,RP11-330H6.5,RP11-330H6.6,
../firstrun/newGeneCopies/AIP/AIP_partitions/AIP_group1.fasta	../firstrun/newGeneCopies/AIP/AIP_partitions/AIP_group1_AIPOOOMIR6752OOOPITPNM1.fasta	TMEM134,MIR6752,PITPNM1,AIP,
../firstrun/newGeneCopies/AIP/AIP_partitions/AIP_group2.fasta	../firstrun/newGeneCopies/AIP/AIP_partitions/AIP_group2_AIPL1OOORP11-636N17v1.fasta	AIPL1,RP11-636N17.1,
../firstrun/newGeneCopies/LDLR/LDLR_partitions/LDLR_group13.fasta	../firstrun/newGeneCopies/LDLR/LDLR_partitions/LDLR_group13_LDLRAD4OOOC18orf15OOORP11-756J15v2.fasta	RP11-794M8.1,RP11-756J15.4,RP11-756J15.2,LDLRAD4,RP11-756J15.3,C18orf15,
../firstrun/newGeneCopies/LDLR/LDLR_partitions/LDLR_group18.fasta	../firstrun/newGeneCopies/LDLR/LDLR_partitions/LDLR_group18_LDLROOOMIR6886OOOSMARCA4.fasta	SMARCA4,SPC24,LDLR,MIR6886,
../firstrun/newGeneCopies/LDLR/LDLR_partitions/LDLR_group15.fasta	../firstrun/newGeneCopies/LDLR/LDLR_partitions/LDLR_group15_LDLRAD4.fasta	LDLRAD4,
../firstrun/newGeneCopies/LDLR/LDLR_partitions/LDLR_group16.fasta	../firstrun/newGeneCopies/LDLR/LDLR_partitions/LDLR_group16_LDLRAD4OOOLDLRAD4-AS1OOOAP005131v6.fasta	MIR4526,RP11-691H4.4,LDLRAD4-AS1,RP11-53B2.5,LDLRAD4,AP005131.7,RP11-53B2.1,RP11-53B2.4,RP11-701H16.4,RP11-691H4.3,RP11-53B2.3,MIR5190,AP005131.6,
../firstrun/newGeneCopies/TPSAB1/TPSAB1_partitions/TPSAB1_group1.fasta	../firstrun/newGeneCopies/TPSAB1/TPSAB1_partitions/TPSAB1_group1_TPSAB1OOOTPSB2OOOTPSD1.fasta	TPSAB1,TPSD1,TPSB2,
../firstrun/newGeneCopies/ARMCX/ARMCX_partitions/ARMCX_group14.fasta	../firstrun/newGeneCopies/ARMCX/ARMCX_partitions/ARMCX_group14_ARMCX5OOOARMCX5-GPRASP2OOOBEND7P1.fasta	GPRASP1,BEND7P1,RP4-769N13.9,ARMCX5,H3P45,GPRASP2,BHLHB9,ARMCX5-GPRASP2,RP4-769N13.7,
../firstrun/newGeneCopies/ARMCX/ARMCX_partitions/ARMCX_group9.fasta	../firstrun/newGeneCopies/ARMCX/ARMCX_partitions/ARMCX_group9_ARMCX3OOOARMCX3-AS1OOOARMCX6.fasta	ARMCX3-AS1,ARMCX3,ARMCX7P,ARMCX6,RP4-545K15.5,
../firstrun/newGeneCopies/ARMCX/ARMCX_partitions/ARMCX_group12.fasta	../firstrun/newGeneCopies/ARMCX/ARMCX_partitions/ARMCX_group12_ARMCX2.fasta	ARMCX2,
../firstrun/newGeneCopies/ARMCX/ARMCX_partitions/ARMCX_group7.fasta	../firstrun/newGeneCopies/ARMCX/ARMCX_partitions/ARMCX_group7_ARMCX1OOOARMCX4OOOPRKCIP1.fasta	PRKCIP1,ARMCX1,ARMCX4,
../firstrun/newGeneCopies/MDK/MDK_partitions/MDK_group1.fasta	../firstrun/newGeneCopies/MDK/MDK_partitions/MDK_group1_MDKOOOCHRM4OOODGKZ.fasta	MDK,RP11-65B7.2,NRAD1,DGKZP1,MIR4688,DGKZ,CHRM4,
../firstrun/newGeneCopies/DEFA3/DEFA3_partitions/DEFA3_group1.fasta	../firstrun/newGeneCopies/DEFA3/DEFA3_partitions/DEFA3_group1_DEFA3OOODEFA1OOODEFA1B.fasta	DEFA1,DEFA3,DEFA1B,
../firstrun/newGeneCopies/SLC34A/SLC34A_partitions/SLC34A_group3.fasta	../firstrun/newGeneCopies/SLC34A/SLC34A_partitions/SLC34A_group3_SLC34A3OOOCYSRT1OOORNF224.fasta	CYSRT1,SLC34A3,RNF224,
../firstrun/newGeneCopies/SLC34A/SLC34A_partitions/SLC34A_group1.fasta	../firstrun/newGeneCopies/SLC34A/SLC34A_partitions/SLC34A_group1_SLC34A2OOORPS29P11.fasta	RPS29P11,SLC34A2,
../firstrun/newGeneCopies/WDR82/WDR82_partitions/WDR82_group2.fasta	../firstrun/newGeneCopies/WDR82/WDR82_partitions/WDR82_group2_WDR82OOOGLYCTKOOOGLYCTK-AS1.fasta	WDR82,GLYCTK-AS1,GLYCTK,MIRLET7G,
../firstrun/newGeneCopies/DEFA1/DEFA1_partitions/DEFA1_group1.fasta	../firstrun/newGeneCopies/DEFA1/DEFA1_partitions/DEFA1_group1_DEFA1OOODEFA1BOOODEFA3.fasta	DEFA3,DEFA1B,DEFA1,
../firstrun/newGeneCopies/DPY19L2/DPY19L2_partitions/DPY19L2_group74.fasta	../firstrun/newGeneCopies/DPY19L2/DPY19L2_partitions/DPY19L2_group74_DPY19L2OOODPY19L2P1OOODPY19L2P2.fasta	DPY19L2P1,RP11-225B17.2,MIR550B2,ZNRF2P3,STEAP1B,MIR550B1,DPY19L2,DPY19L2P2,MIR550A1,RP11-972L6.2,DPY19L2P4,S100A11P1,ZNRF2P2,LINC00997,MIR550A2,SFTPD,RP11-415I12.3,DPY19L2P3,STEAP2-AS1,S100A11P2,EEF1A1P6,DPY19L2P5,RP5-1121E10.2,ZNRF2P1,ZNRF2,DPY19L1P1,AC004800.1,MIR550A3,
../firstrun/newGeneCopies/DNMT3B/DNMT3B_partitions/DNMT3B_group2.fasta	../firstrun/newGeneCopies/DNMT3B/DNMT3B_partitions/DNMT3B_group2_DNMT3B.fasta	DNMT3B,
../firstrun/newGeneCopies/DNMT3L/DNMT3L_partitions/DNMT3L_group1.fasta	../firstrun/newGeneCopies/DNMT3L/DNMT3L_partitions/DNMT3L_group1_DNMT3LOOODNMT3L-AS1OOOAP001059v7.fasta	CH507-9B2.1,DNMT3L,DNMT3L-AS1,CH507-9B2.2,AP001059.7,
../firstrun/newGeneCopies/EDC3/EDC3_partitions/EDC3_group2.fasta	../firstrun/newGeneCopies/EDC3/EDC3_partitions/EDC3_group2_EDC3OOOCLK3.fasta	CLK3,EDC3,
../firstrun/newGeneCopies/INTS14/INTS14_partitions/INTS14_group1.fasta	../firstrun/newGeneCopies/INTS14/INTS14_partitions/INTS14_group1_INTS14OOOHACD3OOOSLC24A1.fasta	INTS14,HACD3,SLC24A1,
../firstrun/newGeneCopies/ZNF200/ZNF200_partitions/ZNF200_group1.fasta	../firstrun/newGeneCopies/ZNF200/ZNF200_partitions/ZNF200_group1_ZNF200OOOAJ003147v9.fasta	AJ003147.9,ZNF200,
../firstrun/newGeneCopies/RPIA/RPIA_partitions/RPIA_group1.fasta	../firstrun/newGeneCopies/RPIA/RPIA_partitions/RPIA_group1_RPIAOOOAC062029v1OOOEIF2AK3.fasta	EIF2AK3,RPIA,AC062029.1,
../firstrun/newGeneCopies/SCAMP5/SCAMP5_partitions/SCAMP5_group1.fasta	../firstrun/newGeneCopies/SCAMP5/SCAMP5_partitions/SCAMP5_group1_SCAMP5OOOPPCDCOOORP11-151H2v1.fasta	PPCDC,RP11-151H2.3,RPP25,RP11-151H2.1,SCAMP5,Y_RNA,
../firstrun/newGeneCopies/ETV3L/ETV3L_partitions/ETV3L_group1.fasta	../firstrun/newGeneCopies/ETV3L/ETV3L_partitions/ETV3L_group1_ETV3L.fasta	ETV3L,
../firstrun/newGeneCopies/CSTF1/CSTF1_partitions/CSTF1_group1.fasta	../firstrun/newGeneCopies/CSTF1/CSTF1_partitions/CSTF1_group1_CSTF1OOOAURKA.fasta	CSTF1,AURKA,
../firstrun/newGeneCopies/RAD9A/RAD9A_partitions/RAD9A_group2.fasta	../firstrun/newGeneCopies/RAD9A/RAD9A_partitions/RAD9A_group2_RAD9AOOORP11-157K17v6.fasta	RP11-157K17.6,RAD9A,
../firstrun/newGeneCopies/RAD9A/RAD9A_partitions/RAD9A_group3.fasta	../firstrun/newGeneCopies/RAD9A/RAD9A_partitions/RAD9A_group3_RAD9AOOOAP003419v11OOOCLCF1.fasta	RN7SKP239,RAD9A,PPP1CA,CTC-1337H24.3,CTC-1337H24.4,AP003419.11,RNU6-1238P,POLD4,CLCF1,
../firstrun/newGeneCopies/TARS2/TARS2_partitions/TARS2_group1.fasta	../firstrun/newGeneCopies/TARS2/TARS2_partitions/TARS2_group1_TARS2OOOECM1OOOMIR6878.fasta	MIR6878,ECM1,TARS2,
../firstrun/newGeneCopies/GAS8/GAS8_partitions/GAS8_group1.fasta	../firstrun/newGeneCopies/GAS8/GAS8_partitions/GAS8_group1_GAS8OOOGAS8-AS1OOODBNDD1.fasta	URAHP,GAS8,GAS8-AS1,DBNDD1,
../firstrun/newGeneCopies/KLF13/KLF13_partitions/KLF13_group1.fasta	../firstrun/newGeneCopies/KLF13/KLF13_partitions/KLF13_group1_KLF13.fasta	KLF13,
../firstrun/newGeneCopies/KLF13/KLF13_partitions/KLF13_group2.fasta	../firstrun/newGeneCopies/KLF13/KLF13_partitions/KLF13_group2_KLF13OOOUBE2CP4.fasta	UBE2CP4,KLF13,
../firstrun/newGeneCopies/OTOA/OTOA_partitions/OTOA_group2.fasta	../firstrun/newGeneCopies/OTOA/OTOA_partitions/OTOA_group2_OTOAOOOOTOAP1OOOENSG00000284559.fasta	ENSG00000284559,NPIPB4,OTOA,NPIPB5,RP11-345J4.11,OTOAP1,NPIPB3,NPIPB13,SMG1P6,
../firstrun/newGeneCopies/PCDHB/PCDHB_partitions/PCDHB_group2.fasta	../firstrun/newGeneCopies/PCDHB/PCDHB_partitions/PCDHB_group2_PCDHB10OOOPCDHB11OOOPCDHB12.fasta	CH17-140K24.4,PCDHB19P,CH17-140K24.5,PCDHB2,CH17-140K24.8,CH17-140K24.7,CH17-140K24.2,PCDHB17P,PCDHB10,PCDHB13,PCDHB5,PCDHB18P,CTC-270D5.1,AC005754.7,PCDHB12,PCDHB16,PCDHB15,AC005754.8,PCDHB6,PCDHB4,PCDHB8,PCDHB11,PCDHB7,PCDHB9,CH17-140K24.6,PCDHB3,PCDHB14,
../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group7.fasta	../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group7_SPECC1OOOAC005730v2.fasta	AC005730.2,SPECC1,
../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group8.fasta	../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group8_SPECC1OOOKCTD9P1OOORNU6-258P.fasta	RNU6-258P,SPECC1,KCTD9P1,
../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group5.fasta	../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group5_SPECC1OOOSPECC1-DT.fasta	SPECC1-DT,SPECC1,
../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group9.fasta	../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group9_SPECC1.fasta	SPECC1,
../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group10.fasta	../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group10_SPECC1OOOAC004702v2.fasta	SPECC1,AC004702.2,
../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group2.fasta	../firstrun/newGeneCopies/SPECC1/SPECC1_partitions/SPECC1_group2_SPECC1OOOSPECC1P1OOOSPECC1P2.fasta	RNASEH1P1,CCDC144NL,CCDC144NL-AS1,RP11-381P6.1,AC087499.7,SPECC1P1,RNU6-1178P,AC004702.2,CCDC144CP,RNU6-467P,RP11-121A13.3,LINC02087,RNU6-1057P,SPECC1,SPECC1P2,
../firstrun/newGeneCopies/EAPP/EAPP_partitions/EAPP_group1.fasta	../firstrun/newGeneCopies/EAPP/EAPP_partitions/EAPP_group1_EAPPOOORNU1-28POOORP11-671J11v4.fasta	SNX6,RP11-671J11.5,RP11-671J11.4,EAPP,RPS19P3,RNU1-28P,RP11-671J11.7,
../firstrun/newGeneCopies/AKIP1/AKIP1_partitions/AKIP1_group1.fasta	../firstrun/newGeneCopies/AKIP1/AKIP1_partitions/AKIP1_group1_AKIP1OOOC11orf16OOODENND2B.fasta	C11orf16,AKIP1,DENND2B,
../firstrun/newGeneCopies/EDEM2/EDEM2_partitions/EDEM2_group1.fasta	../firstrun/newGeneCopies/EDEM2/EDEM2_partitions/EDEM2_group1_EDEM2OOOENSG10010137848v1.fasta	ENSG10010137848.1,EDEM2,
../firstrun/newGeneCopies/ZNF566/ZNF566_partitions/ZNF566_group1.fasta	../firstrun/newGeneCopies/ZNF566/ZNF566_partitions/ZNF566_group1_ZNF566OOOZNF566-AS1.fasta	ZNF566,ZNF566-AS1,
../firstrun/newGeneCopies/CDK16/CDK16_partitions/CDK16_group1.fasta	../firstrun/newGeneCopies/CDK16/CDK16_partitions/CDK16_group1_CDK16OOOUBA1OOOUSP11.fasta	UBA1,USP11,CDK16,
../firstrun/newGeneCopies/CFL2/CFL2_partitions/CFL2_group1.fasta	../firstrun/newGeneCopies/CFL2/CFL2_partitions/CFL2_group1_CFL2.fasta	CFL2,
../firstrun/newGeneCopies/C6orf/C6orf_partitions/C6orf_group24.fasta	../firstrun/newGeneCopies/C6orf/C6orf_partitions/C6orf_group24_C6orf118.fasta	C6orf118,
../firstrun/newGeneCopies/C6orf/C6orf_partitions/C6orf_group13.fasta	../firstrun/newGeneCopies/C6orf/C6orf_partitions/C6orf_group13_C6orf89OOOPPIL1.fasta	PPIL1,C6orf89,
../firstrun/newGeneCopies/CPLANE2/CPLANE2_partitions/CPLANE2_group1.fasta	../firstrun/newGeneCopies/CPLANE2/CPLANE2_partitions/CPLANE2_group1_CPLANE2OOOANO7L1OOOMT1XP1.fasta	CPLANE2,MT1XP1,RP4-733M16.8,ANO7L1,
../firstrun/newGeneCopies/TSPAN2/TSPAN2_partitions/TSPAN2_group1.fasta	../firstrun/newGeneCopies/TSPAN2/TSPAN2_partitions/TSPAN2_group1_TSPAN2.fasta	TSPAN2,
../firstrun/newGeneCopies/STK33/STK33_partitions/STK33_group2.fasta	../firstrun/newGeneCopies/STK33/STK33_partitions/STK33_group2_STK33.fasta	STK33,
../firstrun/newGeneCopies/STK33/STK33_partitions/STK33_group7.fasta	../firstrun/newGeneCopies/STK33/STK33_partitions/STK33_group7_STK33OOOENSG10010135769v1.fasta	ENSG10010135769.1,STK33,
../firstrun/newGeneCopies/STK33/STK33_partitions/STK33_group6.fasta	../firstrun/newGeneCopies/STK33/STK33_partitions/STK33_group6_STK33.fasta	STK33,
../firstrun/newGeneCopies/STK33/STK33_partitions/STK33_group5.fasta	../firstrun/newGeneCopies/STK33/STK33_partitions/STK33_group5_STK33.fasta	STK33,
../firstrun/newGeneCopies/ESS2/ESS2_partitions/ESS2_group1.fasta	../firstrun/newGeneCopies/ESS2/ESS2_partitions/ESS2_group1_ESS2OOOAC004471v10OOOGSC2.fasta	ESS2,AC004471.10,GSC2,TSSK2,
../firstrun/newGeneCopies/ERLEC1/ERLEC1_partitions/ERLEC1_group1.fasta	../firstrun/newGeneCopies/ERLEC1/ERLEC1_partitions/ERLEC1_group1_ERLEC1OOOASB3OOOGPR75-ASB3.fasta	GPR75-ASB3,ERLEC1,ASB3,
../firstrun/newGeneCopies/ANGEL1/ANGEL1_partitions/ANGEL1_group5.fasta	../firstrun/newGeneCopies/ANGEL1/ANGEL1_partitions/ANGEL1_group5_ANGEL1OOOLRRC74AOOORP11-488C13v8.fasta	ANGEL1,VASH1,RP11-488C13.8,VASH1-AS1,LRRC74A,
../firstrun/newGeneCopies/SLC5A/SLC5A_partitions/SLC5A_group15.fasta	../firstrun/newGeneCopies/SLC5A/SLC5A_partitions/SLC5A_group15_SLC5A2OOOAC026471v6OOORUSF1.fasta	AC026471.6,RUSF1,SLC5A2,
../firstrun/newGeneCopies/SLC5A/SLC5A_partitions/SLC5A_group16.fasta	../firstrun/newGeneCopies/SLC5A/SLC5A_partitions/SLC5A_group16_SLC5A10OOOAC090286v4OOOFAM83G.fasta	GRAP,AC090286.4,RP11-28B23.1,SLC5A10,FAM83G,
../firstrun/newGeneCopies/BNIP/BNIP_partitions/BNIP_group1.fasta	../firstrun/newGeneCopies/BNIP/BNIP_partitions/BNIP_group1_BNIPLOOOC1orf56OOOPRUNE1.fasta	PRUNE1,C1orf56,BNIPL,
../firstrun/newGeneCopies/BNIP/BNIP_partitions/BNIP_group15.fasta	../firstrun/newGeneCopies/BNIP/BNIP_partitions/BNIP_group15_BNIP3OOORP11-45A17v2OOORP11-45A17v4.fasta	RP11-45A17.2,BNIP3,RP11-45A17.4,
../firstrun/newGeneCopies/BNIP/BNIP_partitions/BNIP_group6.fasta	../firstrun/newGeneCopies/BNIP/BNIP_partitions/BNIP_group6_BNIP5OOOPNPLA1.fasta	BNIP5,PNPLA1,
../firstrun/newGeneCopies/EMID1/EMID1_partitions/EMID1_group1.fasta	../firstrun/newGeneCopies/EMID1/EMID1_partitions/EMID1_group1_EMID1OOOCTA-984G1v5OOORHBDD3.fasta	CTA-984G1.5,EMID1,RHBDD3,
../firstrun/newGeneCopies/CTTN/CTTN_partitions/CTTN_group5.fasta	../firstrun/newGeneCopies/CTTN/CTTN_partitions/CTTN_group5_CTTNOOOAP000487v5.fasta	AP000487.5,CTTN,
../firstrun/newGeneCopies/DHRS2/DHRS2_partitions/DHRS2_group1.fasta	../firstrun/newGeneCopies/DHRS2/DHRS2_partitions/DHRS2_group1_DHRS2.fasta	DHRS2,
../firstrun/newGeneCopies/DCAF16/DCAF16_partitions/DCAF16_group1.fasta	../firstrun/newGeneCopies/DCAF16/DCAF16_partitions/DCAF16_group1_DCAF16OOONCAPG.fasta	DCAF16,NCAPG,
../firstrun/newGeneCopies/GSTA5/GSTA5_partitions/GSTA5_group1.fasta	../firstrun/newGeneCopies/GSTA5/GSTA5_partitions/GSTA5_group1_GSTA5OOOGSTA1OOOGSTA11P.fasta	GSTA11P,GSTA1,GSTA5,
../firstrun/newGeneCopies/MUC20/MUC20_partitions/MUC20_group2.fasta	../firstrun/newGeneCopies/MUC20/MUC20_partitions/MUC20_group2_MUC20OOOMUC20-OT1OOOMUC20P1.fasta	SDHAP1,CTD-2546F11.1,SDHAP2,RUBCN,SDHA,CCDC127,SDHAP3,MUC20,RP11-496H1.4,AC024560.2,CTD-2012J19.3,AC024560.3,MUC20-OT1,RP11-43F13.1,SMBD1P,MUC20P1,MIR570,MUC4,CTD-2012J19.2,MIR922,AC069513.4,
../firstrun/newGeneCopies/DEFB103/DEFB103_partitions/DEFB103_group1.fasta	../firstrun/newGeneCopies/DEFB103/DEFB103_partitions/DEFB103_group1_DEFB103AOOODEFB103B.fasta	DEFB103B,DEFB103A,
../firstrun/newGeneCopies/SH3BGRL3/SH3BGRL3_partitions/SH3BGRL3_group1.fasta	../firstrun/newGeneCopies/SH3BGRL3/SH3BGRL3_partitions/SH3BGRL3_group1_SH3BGRL3OOOCEP85OOOUBXN11.fasta	CEP85,UBXN11,SH3BGRL3,
../firstrun/newGeneCopies/HIP1R/HIP1R_partitions/HIP1R_group2.fasta	../firstrun/newGeneCopies/HIP1R/HIP1R_partitions/HIP1R_group2_HIP1ROOORP11-463O12v3OOOVPS37B.fasta	RP11-463O12.3,VPS37B,HIP1R,
../firstrun/newGeneCopies/LRRC36/LRRC36_partitions/LRRC36_group1.fasta	../firstrun/newGeneCopies/LRRC36/LRRC36_partitions/LRRC36_group1_LRRC36OOOKCTD19.fasta	KCTD19,LRRC36,
../firstrun/newGeneCopies/SLC6A/SLC6A_partitions/SLC6A_group18.fasta	../firstrun/newGeneCopies/SLC6A/SLC6A_partitions/SLC6A_group18_SLC6A3.fasta	SLC6A3,
../firstrun/newGeneCopies/SLC6A/SLC6A_partitions/SLC6A_group35.fasta	../firstrun/newGeneCopies/SLC6A/SLC6A_partitions/SLC6A_group35_SLC6A10POOOSLC6A8OOOENSG00000273554.fasta	SLC6A10P,PNCK,ENSG00000273554,RP11-812E19.3,RP11-598D12.4,SLC6A8,RP11-989E6.3,
../firstrun/newGeneCopies/SLC6A/SLC6A_partitions/SLC6A_group38.fasta	../firstrun/newGeneCopies/SLC6A/SLC6A_partitions/SLC6A_group38_SLC6A2OOORP11-481F24v3.fasta	RP11-481F24.3,SLC6A2,
../firstrun/newGeneCopies/SLC6A/SLC6A_partitions/SLC6A_group17.fasta	../firstrun/newGeneCopies/SLC6A/SLC6A_partitions/SLC6A_group17_SLC6A18OOOSLC6A19.fasta	SLC6A19,SLC6A18,
../firstrun/newGeneCopies/MAPRE1/MAPRE1_partitions/MAPRE1_group4.fasta	../firstrun/newGeneCopies/MAPRE1/MAPRE1_partitions/MAPRE1_group4_MAPRE1OOORP5-1085F17v4.fasta	RP5-1085F17.4,MAPRE1,
../firstrun/newGeneCopies/ILRUN/ILRUN_partitions/ILRUN_group3.fasta	../firstrun/newGeneCopies/ILRUN/ILRUN_partitions/ILRUN_group3_ILRUN.fasta	ILRUN,
../firstrun/newGeneCopies/ILRUN/ILRUN_partitions/ILRUN_group2.fasta	../firstrun/newGeneCopies/ILRUN/ILRUN_partitions/ILRUN_group2_ILRUNOOORPL7P25.fasta	ILRUN,RPL7P25,
../firstrun/newGeneCopies/ILRUN/ILRUN_partitions/ILRUN_group4.fasta	../firstrun/newGeneCopies/ILRUN/ILRUN_partitions/ILRUN_group4_ILRUNOOOILRUN-AS1OOORN7SL200P.fasta	RN7SL200P,RP3-391O22.1,ILRUN,ILRUN-AS1,
../firstrun/newGeneCopies/NDOR1/NDOR1_partitions/NDOR1_group1.fasta	../firstrun/newGeneCopies/NDOR1/NDOR1_partitions/NDOR1_group1_NDOR1OOORNF208OOORP13-122B23v13.fasta	RP13-122B23.13,RNF208,TMEM203,NDOR1,TPRN,
../firstrun/newGeneCopies/MUSTN1/MUSTN1_partitions/MUSTN1_group1.fasta	../firstrun/newGeneCopies/MUSTN1/MUSTN1_partitions/MUSTN1_group1_MUSTN1OOOSTIMATE-MUSTN1OOOITIH4.fasta	STIMATE-MUSTN1,RP5-966M1.6,STIMATE,ITIH4,MUSTN1,
../firstrun/newGeneCopies/TPTE/TPTE_partitions/TPTE_group19.fasta	../firstrun/newGeneCopies/TPTE/TPTE_partitions/TPTE_group19_TPTEOOOTPTE2OOOTPTE2P1.fasta	KB-7G2.8,SLC25A15P2,KB-7G2.9,LINC02333,ANKRD62P1,RP11-78J21.5,KB-67B5.18,AC005301.9,RP11-556N21.1,TPTEP2-CSNK1E,AL078471.5,SLC25A15P1,PARP4P1,RP11-471M10.3,FABP5P3,RP11-385E5.5,TPTE2P4,CYCSP34,SLC25A15P5,ANKRD62,RP11-556N21.7,VWFP1,ZNF217,CYCSP32,CYCSP41,TPTEP1,PARP4P3,SLC25A15,TPTE2P1,LINC00421,RP11-78J21.6,PSPC1P2,TPTE2P5,RP11-248G5.8,RP1-5O6.4,RP11-756A22.7,AC005808.3,SLC25A15P4,SUGT1P3,PARP4P2,SLC25A15P3,TPTE2P2,TPTE,MIR621,LINC00345,PARP4,CCNQP3,ANKRD62P1-PARP4P3,KMT2C,ANKRD26P3,CCNQP2,CYCSP33,CYCSP49,TPTE2P6,CENPJ,TPTE2,TPTEP2,
../firstrun/newGeneCopies/ZIM3/ZIM3_partitions/ZIM3_group1.fasta	../firstrun/newGeneCopies/ZIM3/ZIM3_partitions/ZIM3_group1_ZIM3OOOUSP29.fasta	ZIM3,USP29,
../firstrun/newGeneCopies/RP11-49K24.6/RP11-49K24.6_partitions/RP11-49K24.6_group3.fasta	../firstrun/newGeneCopies/RP11-49K24.6/RP11-49K24.6_partitions/RP11-49K24.6_group3_RP11-49K24v6OOOHDHD2OOOIER3IP1.fasta	RP11-49K24.5,HDHD2,IER3IP1,RP11-49K24.8,RP11-49K24.6,
../firstrun/newGeneCopies/ZNF785/ZNF785_partitions/ZNF785_group1.fasta	../firstrun/newGeneCopies/ZNF785/ZNF785_partitions/ZNF785_group1_ZNF785OOOAC002310v17OOOAC002310v7.fasta	AC002310.17,RP11-146F11.5,ZNF785,AC002310.7,ZNF688,
../firstrun/newGeneCopies/HCRTR1/HCRTR1_partitions/HCRTR1_group1.fasta	../firstrun/newGeneCopies/HCRTR1/HCRTR1_partitions/HCRTR1_group1_HCRTR1OOOPEF1.fasta	HCRTR1,PEF1,
../firstrun/newGeneCopies/DEFB115/DEFB115_partitions/DEFB115_group1.fasta	../firstrun/newGeneCopies/DEFB115/DEFB115_partitions/DEFB115_group1_DEFB115.fasta	DEFB115,
../firstrun/newGeneCopies/NRSN2/NRSN2_partitions/NRSN2_group2.fasta	../firstrun/newGeneCopies/NRSN2/NRSN2_partitions/NRSN2_group2_NRSN2OOONRSN2-AS1OOOSOX12.fasta	NRSN2-AS1,SOX12,NRSN2,
../firstrun/newGeneCopies/PPFIA1/PPFIA1_partitions/PPFIA1_group2.fasta	../firstrun/newGeneCopies/PPFIA1/PPFIA1_partitions/PPFIA1_group2_PPFIA1OOOAP000487v6OOOH2AZP4.fasta	MIR548K,H2AZP4,AP000487.6,PPFIA1,
../firstrun/newGeneCopies/PPFIA1/PPFIA1_partitions/PPFIA1_group3.fasta	../firstrun/newGeneCopies/PPFIA1/PPFIA1_partitions/PPFIA1_group3_PPFIA1OOOAP000487v4OOOAP000487v5.fasta	AP000487.6,AP000487.5,AP000487.4,CTA-797E19.1,CTA-797E19.2,PPFIA1,
../firstrun/newGeneCopies/ROCK1/ROCK1_partitions/ROCK1_group14.fasta	../firstrun/newGeneCopies/ROCK1/ROCK1_partitions/ROCK1_group14_ROCK1OOOROCK1P1OOOMIR8078.fasta	MIR8078,RNU6-120P,ROCK1P1,RP11-254G11.1,ROCK1,
../firstrun/newGeneCopies/B9D1/B9D1_partitions/B9D1_group1.fasta	../firstrun/newGeneCopies/B9D1/B9D1_partitions/B9D1_group1_B9D1OOOAC124066v1OOOEPN2.fasta	MIR1180,MAPK7,AC124066.1,EPN2,RP11-135L13.7,B9D1,
../firstrun/newGeneCopies/ACTRT2/ACTRT2_partitions/ACTRT2_group1.fasta	../firstrun/newGeneCopies/ACTRT2/ACTRT2_partitions/ACTRT2_group1_ACTRT2.fasta	ACTRT2,
../firstrun/newGeneCopies/ZDHHC1/ZDHHC1_partitions/ZDHHC1_group1.fasta	../firstrun/newGeneCopies/ZDHHC1/ZDHHC1_partitions/ZDHHC1_group1_ZDHHC1OOOTPPP3.fasta	TPPP3,ZDHHC1,
../firstrun/newGeneCopies/AP5B1/AP5B1_partitions/AP5B1_group1.fasta	../firstrun/newGeneCopies/AP5B1/AP5B1_partitions/AP5B1_group1_AP5B1OOORP11-770G2v2.fasta	RP11-770G2.2,AP5B1,
../firstrun/newGeneCopies/FAM240C/FAM240C_partitions/FAM240C_group1.fasta	../firstrun/newGeneCopies/FAM240C/FAM240C_partitions/FAM240C_group1_FAM240COOOLINC01237.fasta	LINC01237,FAM240C,
../firstrun/newGeneCopies/ATP12A/ATP12A_partitions/ATP12A_group2.fasta	../firstrun/newGeneCopies/ATP12A/ATP12A_partitions/ATP12A_group2_ATP12AOOORNY1P7OOORPL26P34.fasta	ATP12A,RPL26P34,RNY1P7,
../firstrun/newGeneCopies/RP11-529K1.3/RP11-529K1.3_partitions/RP11-529K1.3_group1.fasta	../firstrun/newGeneCopies/RP11-529K1.3/RP11-529K1.3_partitions/RP11-529K1.3_group1_RP11-529K1v3OOOAARS1OOODDX19A.fasta	DDX19B,RP11-529K1.3,DDX19A-DT,DDX19A,RP11-529K1.5,AARS1,
../firstrun/newGeneCopies/SYPL2/SYPL2_partitions/SYPL2_group1.fasta	../firstrun/newGeneCopies/SYPL2/SYPL2_partitions/SYPL2_group1_SYPL2OOOATXN7L2.fasta	ATXN7L2,SYPL2,
../firstrun/newGeneCopies/WBP2NL/WBP2NL_partitions/WBP2NL_group27.fasta	../firstrun/newGeneCopies/WBP2NL/WBP2NL_partitions/WBP2NL_group27_WBP2NLOOONAGA.fasta	NAGA,WBP2NL,
../firstrun/newGeneCopies/WBP2NL/WBP2NL_partitions/WBP2NL_group26.fasta	../firstrun/newGeneCopies/WBP2NL/WBP2NL_partitions/WBP2NL_group26_WBP2NLOOOSEPTIN3OOOSLC25A5P1.fasta	WBP2NL,SEPTIN3,SLC25A5P1,
../firstrun/newGeneCopies/NLRP12/NLRP12_partitions/NLRP12_group1.fasta	../firstrun/newGeneCopies/NLRP12/NLRP12_partitions/NLRP12_group1_NLRP12OOOAC008753v4OOOMIR373.fasta	MIR373,NLRP12,AC008753.4,
../firstrun/newGeneCopies/PDPR/PDPR_partitions/PDPR_group1.fasta	../firstrun/newGeneCopies/PDPR/PDPR_partitions/PDPR_group1_PDPROOOPDPR2POOOAC009120v6.fasta	RP11-296I10.3,AC009120.6,PDPR,RP11-252A24.3,PDPR2P,
../firstrun/newGeneCopies/NLE1/NLE1_partitions/NLE1_group1.fasta	../firstrun/newGeneCopies/NLE1/NLE1_partitions/NLE1_group1_NLE1OOOFNDC8.fasta	FNDC8,NLE1,
../firstrun/newGeneCopies/OGFOD2/OGFOD2_partitions/OGFOD2_group1.fasta	../firstrun/newGeneCopies/OGFOD2/OGFOD2_partitions/OGFOD2_group1_OGFOD2OOOABCB9OOOARL6IP4.fasta	OGFOD2,ABCB9,PITPNM2,ARL6IP4,RP11-197N18.2,
../firstrun/newGeneCopies/CTSF/CTSF_partitions/CTSF_group1.fasta	../firstrun/newGeneCopies/CTSF/CTSF_partitions/CTSF_group1_CTSFOOOACTN3OOOCTD-3074O7v2.fasta	CTSF,ACTN3,CTD-3074O7.2,
../firstrun/newGeneCopies/BRAF/BRAF_partitions/BRAF_group1.fasta	../firstrun/newGeneCopies/BRAF/BRAF_partitions/BRAF_group1_BRAFOOONDUFB2.fasta	NDUFB2,BRAF,
../firstrun/newGeneCopies/BRAF/BRAF_partitions/BRAF_group3.fasta	../firstrun/newGeneCopies/BRAF/BRAF_partitions/BRAF_group3_BRAF.fasta	BRAF,
../firstrun/newGeneCopies/CARTPT/CARTPT_partitions/CARTPT_group1.fasta	../firstrun/newGeneCopies/CARTPT/CARTPT_partitions/CARTPT_group1_CARTPT.fasta	CARTPT,
../firstrun/newGeneCopies/KCNQ3/KCNQ3_partitions/KCNQ3_group1.fasta	../firstrun/newGeneCopies/KCNQ3/KCNQ3_partitions/KCNQ3_group1_KCNQ3.fasta	KCNQ3,
../firstrun/newGeneCopies/KCNQ3/KCNQ3_partitions/KCNQ3_group2.fasta	../firstrun/newGeneCopies/KCNQ3/KCNQ3_partitions/KCNQ3_group2_KCNQ3.fasta	KCNQ3,
../firstrun/newGeneCopies/SKA1/SKA1_partitions/SKA1_group1.fasta	../firstrun/newGeneCopies/SKA1/SKA1_partitions/SKA1_group1_SKA1.fasta	SKA1,
../firstrun/newGeneCopies/ZNF737/ZNF737_partitions/ZNF737_group21.fasta	../firstrun/newGeneCopies/ZNF737/ZNF737_partitions/ZNF737_group21_ZNF737OOOCTC-513N18v6OOOCTC-513N18v7.fasta	ZNF737,CTC-513N18.7,CTC-513N18.6,
../firstrun/newGeneCopies/GUSB/GUSB_partitions/GUSB_group46.fasta	../firstrun/newGeneCopies/GUSB/GUSB_partitions/GUSB_group46_GUSBOOOVKORC1L1.fasta	GUSB,VKORC1L1,
../firstrun/newGeneCopies/PSMD4/PSMD4_partitions/PSMD4_group1.fasta	../firstrun/newGeneCopies/PSMD4/PSMD4_partitions/PSMD4_group1_PSMD4.fasta	PSMD4,
../firstrun/newGeneCopies/HLA-E/HLA-E_partitions/HLA-E_group6.fasta	../firstrun/newGeneCopies/HLA-E/HLA-E_partitions/HLA-E_group6_HLA-EOOORANP1.fasta	RANP1,HLA-E,
../firstrun/newGeneCopies/RNF227/RNF227_partitions/RNF227_group1.fasta	../firstrun/newGeneCopies/RNF227/RNF227_partitions/RNF227_group1_RNF227OOOCHD3OOOKCNAB3.fasta	KCNAB3,CHD3,RNF227,
../firstrun/newGeneCopies/MINDY1/MINDY1_partitions/MINDY1_group1.fasta	../firstrun/newGeneCopies/MINDY1/MINDY1_partitions/MINDY1_group1_MINDY1OOOANXA9OOOPRUNE1.fasta	MINDY1,ANXA9,PRUNE1,
../firstrun/newGeneCopies/ACD/ACD_partitions/ACD_group1.fasta	../firstrun/newGeneCopies/ACD/ACD_partitions/ACD_group1_ACDOOOCARMIL2OOOENKD1.fasta	ENKD1,ACD,CARMIL2,PARD6A,
../firstrun/newGeneCopies/RP11-38C17.1/RP11-38C17.1_partitions/RP11-38C17.1_group1.fasta	../firstrun/newGeneCopies/RP11-38C17.1/RP11-38C17.1_partitions/RP11-38C17.1_group1_RP11-38C17v1OOOLIPT1OOOMITD1.fasta	TSGA10,MRPL30,LIPT1,RP11-38C17.1,MITD1,RP11-111H13.1,
../firstrun/newGeneCopies/SHC2/SHC2_partitions/SHC2_group2.fasta	../firstrun/newGeneCopies/SHC2/SHC2_partitions/SHC2_group2_SHC2OOOODF3L2OOORNA5SP462.fasta	RNA5SP462,ODF3L2,SHC2,
../firstrun/newGeneCopies/SHC2/SHC2_partitions/SHC2_group1.fasta	../firstrun/newGeneCopies/SHC2/SHC2_partitions/SHC2_group1_SHC2.fasta	SHC2,
../firstrun/newGeneCopies/PNCK/PNCK_partitions/PNCK_group1.fasta	../firstrun/newGeneCopies/PNCK/PNCK_partitions/PNCK_group1_PNCKOOOENSG00000273554OOORP11-598D12v4.fasta	SLC6A10P,PNCK,RP11-989E6.3,SLC6A8,RP11-598D12.4,ENSG00000273554,RP11-812E19.3,
../firstrun/newGeneCopies/PSMD2/PSMD2_partitions/PSMD2_group1.fasta	../firstrun/newGeneCopies/PSMD2/PSMD2_partitions/PSMD2_group1_PSMD2OOOFMN2OOORP11-567G24v1.fasta	RP11-567G24.1,PSMD2,FMN2,
../firstrun/newGeneCopies/TRIM25/TRIM25_partitions/TRIM25_group1.fasta	../firstrun/newGeneCopies/TRIM25/TRIM25_partitions/TRIM25_group1_TRIM25OOOC17orf67OOODGKE.fasta	RP11-670E13.3,TRIM25,RP11-670E13.5,MIR3614,C17orf67,RP11-670E13.6,DGKE,RNU6-1158P,
../firstrun/newGeneCopies/PLCXD1/PLCXD1_partitions/PLCXD1_group1.fasta	../firstrun/newGeneCopies/PLCXD1/PLCXD1_partitions/PLCXD1_group1_PLCXD1OOOGTPBP6.fasta	PLCXD1,GTPBP6,
../firstrun/newGeneCopies/SPRN/SPRN_partitions/SPRN_group1.fasta	../firstrun/newGeneCopies/SPRN/SPRN_partitions/SPRN_group1_SPRNOOOMTG1OOOOR6L1P.fasta	RP11-108K14.8,SYCE1,SPRN,OR6L1P,MTG1,XX-2136C111.4,
../firstrun/newGeneCopies/TPRX1/TPRX1_partitions/TPRX1_group3.fasta	../firstrun/newGeneCopies/TPRX1/TPRX1_partitions/TPRX1_group3_TPRX1OOOCRXOOOLINC01595.fasta	TPRX2P,LINC01595,CRX,TPRX1,
../firstrun/newGeneCopies/FKBP8/FKBP8_partitions/FKBP8_group2.fasta	../firstrun/newGeneCopies/FKBP8/FKBP8_partitions/FKBP8_group2_FKBP8OOOAC005387v2OOOAC005387v3.fasta	AC005387.3,FKBP8,AC005387.2,
../firstrun/newGeneCopies/MAGEA8/MAGEA8_partitions/MAGEA8_group1.fasta	../firstrun/newGeneCopies/MAGEA8/MAGEA8_partitions/MAGEA8_group1_MAGEA8OOOMAGEA8-AS1OOOLINC00850.fasta	LINC00850,MAGEA8-AS1,MAGEA8,
../firstrun/newGeneCopies/MMEL1/MMEL1_partitions/MMEL1_group1.fasta	../firstrun/newGeneCopies/MMEL1/MMEL1_partitions/MMEL1_group1_MMEL1OOOMMEL1-AS1OOOPRXL2B.fasta	MMEL1-AS1,PRXL2B,TTC34,MMEL1,
../firstrun/newGeneCopies/MAP4K1/MAP4K1_partitions/MAP4K1_group1.fasta	../firstrun/newGeneCopies/MAP4K1/MAP4K1_partitions/MAP4K1_group1_MAP4K1OOOMAP4K1-AS1OOOEIF3K.fasta	RYR1,MAP4K1-AS1,MAP4K1,EIF3K,
../firstrun/newGeneCopies/HMGN4/HMGN4_partitions/HMGN4_group1.fasta	../firstrun/newGeneCopies/HMGN4/HMGN4_partitions/HMGN4_group1_HMGN4.fasta	HMGN4,
../firstrun/newGeneCopies/EOLA/EOLA_partitions/EOLA_group10.fasta	../firstrun/newGeneCopies/EOLA/EOLA_partitions/EOLA_group10_EOLA1OOOEOLA2OOOAF011889v5.fasta	HSFX4,LINC00893,AF011889.5,LINC00894,HSFX3,EOLA1,EOLA2,
../firstrun/newGeneCopies/DNAH1/DNAH1_partitions/DNAH1_group1.fasta	../firstrun/newGeneCopies/DNAH1/DNAH1_partitions/DNAH1_group1_DNAH1OOOBAP1OOOPPP2R5CP.fasta	PPP2R5CP,BAP1,DNAH1,
../firstrun/newGeneCopies/RPN1/RPN1_partitions/RPN1_group1.fasta	../firstrun/newGeneCopies/RPN1/RPN1_partitions/RPN1_group1_RPN1OOOMetazoa_SRPOOOPOU5F1P6.fasta	Metazoa_SRP,POU5F1P6,RPN1,
../firstrun/newGeneCopies/SCART1/SCART1_partitions/SCART1_group2.fasta	../firstrun/newGeneCopies/SCART1/SCART1_partitions/SCART1_group2_SCART1OOOCYP2E1OOORP11-108K14v12.fasta	CYP2E1,SCART1,RP11-108K14.12,
../firstrun/newGeneCopies/SCART1/SCART1_partitions/SCART1_group1.fasta	../firstrun/newGeneCopies/SCART1/SCART1_partitions/SCART1_group1_SCART1.fasta	SCART1,
../firstrun/newGeneCopies/LRRFIP2/LRRFIP2_partitions/LRRFIP2_group2.fasta	../firstrun/newGeneCopies/LRRFIP2/LRRFIP2_partitions/LRRFIP2_group2_LRRFIP2OOORNU6-1301POOOUBE2D3P2.fasta	RNU6-1301P,UBE2FP1,UBE2D3P2,LRRFIP2,
../firstrun/newGeneCopies/LRRFIP2/LRRFIP2_partitions/LRRFIP2_group3.fasta	../firstrun/newGeneCopies/LRRFIP2/LRRFIP2_partitions/LRRFIP2_group3_LRRFIP2OOORP11-285J16v1.fasta	RP11-285J16.1,LRRFIP2,
../firstrun/newGeneCopies/LRRFIP2/LRRFIP2_partitions/LRRFIP2_group1.fasta	../firstrun/newGeneCopies/LRRFIP2/LRRFIP2_partitions/LRRFIP2_group1_LRRFIP2OOOMLH1OOOY_RNA.fasta	LRRFIP2,MLH1,Y_RNA,
../firstrun/newGeneCopies/KCTD20/KCTD20_partitions/KCTD20_group1.fasta	../firstrun/newGeneCopies/KCTD20/KCTD20_partitions/KCTD20_group1_KCTD20OOOPXT1OOORN7SL502P.fasta	KCTD20,PXT1,RN7SL502P,STK38,
../firstrun/newGeneCopies/TESMIN/TESMIN_partitions/TESMIN_group1.fasta	../firstrun/newGeneCopies/TESMIN/TESMIN_partitions/TESMIN_group1_TESMIN.fasta	TESMIN,
../firstrun/newGeneCopies/TFPT/TFPT_partitions/TFPT_group1.fasta	../firstrun/newGeneCopies/TFPT/TFPT_partitions/TFPT_group1_TFPTOOOENSG00000274144OOOENSG00000274651.fasta	ENSG00000276421,ENSG00000277707,ENSG00000274144,ENSG00000277154,OSCAR,ENSG00000277953,ENSG00000275117,ENSG00000274651,PRPF31,TFPT,NDUFA3,ENSG00000274894,
../firstrun/newGeneCopies/BSG/BSG_partitions/BSG_group1.fasta	../firstrun/newGeneCopies/BSG/BSG_partitions/BSG_group1_BSGOOOBSG-AS1.fasta	BSG,BSG-AS1,
../firstrun/newGeneCopies/CARMIL2/CARMIL2_partitions/CARMIL2_group1.fasta	../firstrun/newGeneCopies/CARMIL2/CARMIL2_partitions/CARMIL2_group1_CARMIL2OOOACD.fasta	ACD,CARMIL2,
../firstrun/newGeneCopies/PEX10/PEX10_partitions/PEX10_group1.fasta	../firstrun/newGeneCopies/PEX10/PEX10_partitions/PEX10_group1_PEX10OOORER1.fasta	RER1,PEX10,
../firstrun/newGeneCopies/SOS2/SOS2_partitions/SOS2_group1.fasta	../firstrun/newGeneCopies/SOS2/SOS2_partitions/SOS2_group1_SOS2OOOVCPKMT.fasta	VCPKMT,SOS2,
../firstrun/newGeneCopies/PLGLB/PLGLB_partitions/PLGLB_group1.fasta	../firstrun/newGeneCopies/PLGLB/PLGLB_partitions/PLGLB_group1_PLGLB1OOOPLGLB2OOOAC009963v3.fasta	PLG,AC009963.4,GCC2-AS1,RGPD6,PLGLB1,AC009963.3,RP1-81D8.3,GCC2,RGPD4,PLGLB2,RP13-511M20.1,RGPD2,PLGLA,AC108938.3,RGPD1,RGPD3,RGPD8,RGPD5,
../firstrun/newGeneCopies/CENPJ/CENPJ_partitions/CENPJ_group1.fasta	../firstrun/newGeneCopies/CENPJ/CENPJ_partitions/CENPJ_group1_CENPJOOORNF17OOOTPTE2P1.fasta	TPTE2P1,RNF17,CENPJ,
../firstrun/newGeneCopies/RBCK1/RBCK1_partitions/RBCK1_group1.fasta	../firstrun/newGeneCopies/RBCK1/RBCK1_partitions/RBCK1_group1_RBCK1OOOTBC1D20.fasta	TBC1D20,RBCK1,
../firstrun/newGeneCopies/FAN1/FAN1_partitions/FAN1_group1.fasta	../firstrun/newGeneCopies/FAN1/FAN1_partitions/FAN1_group1_FAN1OOOAC087481v3OOOMTMR10.fasta	FAN1,RP11-540B6.3,MTMR10,AC087481.3,
../firstrun/newGeneCopies/DARS2/DARS2_partitions/DARS2_group1.fasta	../firstrun/newGeneCopies/DARS2/DARS2_partitions/DARS2_group1_DARS2OOOCENPLOOOGAS5.fasta	DARS2,CENPL,GAS5,
../firstrun/newGeneCopies/TMEM158/TMEM158_partitions/TMEM158_group1.fasta	../firstrun/newGeneCopies/TMEM158/TMEM158_partitions/TMEM158_group1_TMEM158.fasta	TMEM158,
../firstrun/newGeneCopies/HOXA/HOXA_partitions/HOXA_group1.fasta	../firstrun/newGeneCopies/HOXA/HOXA_partitions/HOXA_group1_HOXA-AS2OOOHOXA-AS3OOOHOXA1.fasta	ENSG10010135768.1,ENSG10010136112.1,HOXA7,HOXA10,ENSG10010134679.1,RP1-170O19.14,HOXA4,ENSG10010136256.1,MIR196B,ENSG10010139989.1,RP1-170O19.23,ENSG10010134992.1,ENSG10010140081.1,HOTAIRM1,RP1-170O19.24,HOXA2,ENSG10010139893.1,HOXA9,HOXA13,ENSG10010137239.1,ENSG10010138457.1,HOXA11,ENSG10010137575.1,ENSG10010135003.1,HOXA3,HOXA5,RP1-170O19.22,HOXA11-AS,HOXA-AS2,HOXA1,HOXA6,HOXA-AS3,ENSG10010138730.1,HOXA10-HOXA9,ENSG10010138801.1,HOXA10-AS,HOTTIP,
../firstrun/newGeneCopies/LCN10/LCN10_partitions/LCN10_group1.fasta	../firstrun/newGeneCopies/LCN10/LCN10_partitions/LCN10_group1_LCN10OOOLCN6OOOMIR6722.fasta	LCN10,RP11-216L13.16,LCN6,MIR6722,
../firstrun/newGeneCopies/LIME1/LIME1_partitions/LIME1_group1.fasta	../firstrun/newGeneCopies/LIME1/LIME1_partitions/LIME1_group1_LIME1OOORP4-583P15v10OOORP4-583P15v14.fasta	ZGPAT,RP4-583P15.16,SLC2A4RG,RP4-583P15.10,LIME1,RP4-583P15.15,ZBTB46,RP4-583P15.14,
../firstrun/newGeneCopies/CAPN12/CAPN12_partitions/CAPN12_group3.fasta	../firstrun/newGeneCopies/CAPN12/CAPN12_partitions/CAPN12_group3_CAPN12OOOACTN4OOOCTD-2540F13v2.fasta	CAPN12,LGALS7,ACTN4,LGALS7B,CTD-2540F13.2,RNU6-140P,
../firstrun/newGeneCopies/NDUFA3/NDUFA3_partitions/NDUFA3_group12.fasta	../firstrun/newGeneCopies/NDUFA3/NDUFA3_partitions/NDUFA3_group12_NDUFA3OOOOSCAROOOTFPT.fasta	TFPT,NDUFA3,OSCAR,
../firstrun/newGeneCopies/TYW1/TYW1_partitions/TYW1_group1.fasta	../firstrun/newGeneCopies/TYW1/TYW1_partitions/TYW1_group1_TYW1OOOTYW1BOOOMIR4650-1.fasta	TYW1,TYW1B,MIR4650-1,RP11-535E8.2,MIR4650-2,SBDS,RN7SL377P,RP11-324F21.1,RP11-1394O16.1,SBDSP1,
../firstrun/newGeneCopies/SPDYE21/SPDYE21_partitions/SPDYE21_group1.fasta	../firstrun/newGeneCopies/SPDYE21/SPDYE21_partitions/SPDYE21_group1_SPDYE21OOOAC004951v6OOOAC004980v9.fasta	SPDYE3,PMS2P8,POLR2J4,PMS2P7,SPDYE2,SPDYE16,SPDYE14P,RP5-1165K10.2,SPDYE17,SPDYE19P,SPDYE5,PMS2P1,RP11-577H5.5,PMS2P10,RP11-514P8.7,SPDYE9,SPDYE7P,SPDYE15,PMS2CL,DTX2P1-UPK3BP1-PMS2P11,SPDYE6,RP11-467H10.2,SPDYE11,POLR2J3,SPDYE10P,SPDYE13,PMS2P6,SPDYE13P,PMS2P2,PMS2P4,RP11-514P8.10,SPDYE12P,AC004951.6,CH17-264B6.3,SPDYE8,SPDYE14,AC004980.9,SPDYE1,RBAK-RBAKDN,CH17-264B6.6,RP5-1022I14.2,SPDYE18,RNF216P1,CH17-264B6.1,SPDYE2B,SPDYE21,SPDYE15P,SPDYE20P,
../firstrun/newGeneCopies/DUSP22/DUSP22_partitions/DUSP22_group1.fasta	../firstrun/newGeneCopies/DUSP22/DUSP22_partitions/DUSP22_group1_DUSP22OOORP11-328C17v2.fasta	RP11-328C17.2,DUSP22,
../firstrun/newGeneCopies/CHRAC1/CHRAC1_partitions/CHRAC1_group1.fasta	../firstrun/newGeneCopies/CHRAC1/CHRAC1_partitions/CHRAC1_group1_CHRAC1OOOCTA-204B4v2.fasta	CHRAC1,CTA-204B4.2,
../firstrun/newGeneCopies/PCSK4/PCSK4_partitions/PCSK4_group1.fasta	../firstrun/newGeneCopies/PCSK4/PCSK4_partitions/PCSK4_group1_PCSK4OOOC19orf25OOOREEP6.fasta	REEP6,C19orf25,PCSK4,
../firstrun/newGeneCopies/TTLL12/TTLL12_partitions/TTLL12_group1.fasta	../firstrun/newGeneCopies/TTLL12/TTLL12_partitions/TTLL12_group1_TTLL12.fasta	TTLL12,
../firstrun/newGeneCopies/POMC/POMC_partitions/POMC_group1.fasta	../firstrun/newGeneCopies/POMC/POMC_partitions/POMC_group1_POMCOOOEFR3B.fasta	EFR3B,POMC,
../firstrun/newGeneCopies/BEND6/BEND6_partitions/BEND6_group2.fasta	../firstrun/newGeneCopies/BEND6/BEND6_partitions/BEND6_group2_BEND6OOODST.fasta	DST,BEND6,
../firstrun/newGeneCopies/BEND6/BEND6_partitions/BEND6_group3.fasta	../firstrun/newGeneCopies/BEND6/BEND6_partitions/BEND6_group3_BEND6OOOFTH1P15OOOMRPL30P1.fasta	BEND6,MRPL30P1,FTH1P15,OSTCP6,
../firstrun/newGeneCopies/FCHSD1/FCHSD1_partitions/FCHSD1_group1.fasta	../firstrun/newGeneCopies/FCHSD1/FCHSD1_partitions/FCHSD1_group1_FCHSD1OOOARAP3OOOHDAC3.fasta	HDAC3,RELL2,FCHSD1,ARAP3,
../firstrun/newGeneCopies/CCDC77/CCDC77_partitions/CCDC77_group1.fasta	../firstrun/newGeneCopies/CCDC77/CCDC77_partitions/CCDC77_group1_CCDC77OOOKDM5A.fasta	CCDC77,KDM5A,
../firstrun/newGeneCopies/SHCBP1/SHCBP1_partitions/SHCBP1_group3.fasta	../firstrun/newGeneCopies/SHCBP1/SHCBP1_partitions/SHCBP1_group3_SHCBP1OOOISY1-RAB43OOORAB43.fasta	RP11-46D6.1,RAB43,ISY1-RAB43,SHCBP1,
../firstrun/newGeneCopies/FAM219/FAM219_partitions/FAM219_group3.fasta	../firstrun/newGeneCopies/FAM219/FAM219_partitions/FAM219_group3_FAM219BOOOMPI.fasta	FAM219B,MPI,
../firstrun/newGeneCopies/FANCE/FANCE_partitions/FANCE_group1.fasta	../firstrun/newGeneCopies/FANCE/FANCE_partitions/FANCE_group1_FANCEOOOMKRN6POOORPL10A.fasta	MKRN6P,FANCE,RPL10A,
../firstrun/newGeneCopies/NKX2/NKX2_partitions/NKX2_group5.fasta	../firstrun/newGeneCopies/NKX2/NKX2_partitions/NKX2_group5_NKX2-8OOORP11-964E11v3OOORPL29P3.fasta	RPL29P3,NKX2-8,RP11-964E11.3,
../firstrun/newGeneCopies/NOXA1/NOXA1_partitions/NOXA1_group1.fasta	../firstrun/newGeneCopies/NOXA1/NOXA1_partitions/NOXA1_group1_NOXA1OOOENTPD8OOOEXD3.fasta	ENTPD8,EXD3,NOXA1,
../firstrun/newGeneCopies/C2CD4/C2CD4_partitions/C2CD4_group1.fasta	../firstrun/newGeneCopies/C2CD4/C2CD4_partitions/C2CD4_group1_C2CD4DOOOC2CD4D-AS1OOOTHEM5.fasta	C2CD4D,Y_RNA,C2CD4D-AS1,THEM5,
../firstrun/newGeneCopies/C2CD4/C2CD4_partitions/C2CD4_group4.fasta	../firstrun/newGeneCopies/C2CD4/C2CD4_partitions/C2CD4_group4_C2CD4C.fasta	C2CD4C,
../firstrun/newGeneCopies/SPDYE5/SPDYE5_partitions/SPDYE5_group1.fasta	../firstrun/newGeneCopies/SPDYE5/SPDYE5_partitions/SPDYE5_group1_SPDYE5OOOAC004951v6OOOAC004980v9.fasta	SPDYE12P,SPDYE3,SPDYE21,CH17-264B6.6,SPDYE17,PMS2P1,RP5-1165K10.2,SPDYE7P,SPDYE5,RP11-467H10.2,CH17-264B6.1,DTX2P1-UPK3BP1-PMS2P11,SPDYE8,RP11-514P8.7,PMS2P8,SPDYE16,PMS2P2,SPDYE11,CH17-264B6.3,PMS2P4,SPDYE18,PMS2P10,SPDYE15P,SPDYE6,SPDYE20P,PMS2P6,PMS2CL,SPDYE15,SPDYE10P,AC004951.6,RBAK-RBAKDN,AC004980.9,POLR2J2,SPDYE13,SPDYE13P,RNF216P1,PMS2P7,SPDYE14,POLR2J3,RP11-514P8.10,RP11-577H5.5,RP5-1022I14.2,SPDYE9,SPDYE2B,POLR2J4,SPDYE19P,SPDYE2,SPDYE14P,SPDYE1,
../firstrun/newGeneCopies/NRIP3/NRIP3_partitions/NRIP3_group25.fasta	../firstrun/newGeneCopies/NRIP3/NRIP3_partitions/NRIP3_group25_NRIP3OOORP11-467K18v2.fasta	NRIP3,RP11-467K18.2,
../firstrun/newGeneCopies/ZNF585/ZNF585_partitions/ZNF585_group27.fasta	../firstrun/newGeneCopies/ZNF585/ZNF585_partitions/ZNF585_group27_ZNF585AOOOZNF585BOOOCTC-454I21v3.fasta	ZNF585A,CTC-454I21.3,CTC-454I21.4,ZNF383,ZNF420,ZNF585B,
../firstrun/newGeneCopies/GDF3/GDF3_partitions/GDF3_group1.fasta	../firstrun/newGeneCopies/GDF3/GDF3_partitions/GDF3_group1_GDF3.fasta	GDF3,
../firstrun/newGeneCopies/IGHM/IGHM_partitions/IGHM_group1.fasta	../firstrun/newGeneCopies/IGHM/IGHM_partitions/IGHM_group1_IGHMBP2OOOMRPL21OOORP11-757G1v5.fasta	RP11-757G1.5,MRPL21,IGHMBP2,
../firstrun/newGeneCopies/IGHM/IGHM_partitions/IGHM_group3.fasta	../firstrun/newGeneCopies/IGHM/IGHM_partitions/IGHM_group3_IGHMOOOCOPDA1OOOIGHG1.fasta	IGHM,IGHG1,MIR4537,MIR4539,COPDA1,MIR4507,MIR4538,IGHG2,
../firstrun/newGeneCopies/POC1/POC1_partitions/POC1_group3.fasta	../firstrun/newGeneCopies/POC1/POC1_partitions/POC1_group3_POC1A.fasta	POC1A,
../firstrun/newGeneCopies/POC1/POC1_partitions/POC1_group1.fasta	../firstrun/newGeneCopies/POC1/POC1_partitions/POC1_group1_POC1A.fasta	POC1A,
../firstrun/newGeneCopies/CEP170/CEP170_partitions/CEP170_group1.fasta	../firstrun/newGeneCopies/CEP170/CEP170_partitions/CEP170_group1_CEP170OOOCEP170P1OOOCTD-2566J3v2.fasta	RP11-331N16.1,CTD-2566J3.2,RP11-533E23.2,RAD51B,RP11-566H16.2,CEP170P1,SDCCAG8,RP11-261C10.5,CEP170,RP11-586D5.3,RP11-261C10.4,
../firstrun/newGeneCopies/ESPN/ESPN_partitions/ESPN_group1.fasta	../firstrun/newGeneCopies/ESPN/ESPN_partitions/ESPN_group1_ESPNOOOESPNPOOOEIF1AXP1.fasta	RP1-163M9.7,PDE4DIPP2,EIF1AXP1,MIR4252,PDE4DIP,HES2,RP5-875O13.7,ESPNP,TNFRSF25,RP1-202O8.2,RP4-791M13.5,ESPN,
../firstrun/newGeneCopies/FSCN2/FSCN2_partitions/FSCN2_group1.fasta	../firstrun/newGeneCopies/FSCN2/FSCN2_partitions/FSCN2_group1_FSCN2OOOFAAP100OOORP13-766D20v2.fasta	FSCN2,RP13-766D20.2,FAAP100,
../firstrun/newGeneCopies/NEGR1/NEGR1_partitions/NEGR1_group6.fasta	../firstrun/newGeneCopies/NEGR1/NEGR1_partitions/NEGR1_group6_NEGR1OOOGDI2P2OOORP4-660H19v2.fasta	GDI2P2,RP4-660H19.2,NEGR1,
../firstrun/newGeneCopies/NEGR1/NEGR1_partitions/NEGR1_group4.fasta	../firstrun/newGeneCopies/NEGR1/NEGR1_partitions/NEGR1_group4_NEGR1OOONEGR1-IT1.fasta	NEGR1-IT1,NEGR1,
../firstrun/newGeneCopies/NEGR1/NEGR1_partitions/NEGR1_group2.fasta	../firstrun/newGeneCopies/NEGR1/NEGR1_partitions/NEGR1_group2_NEGR1OOORP11-82L20v1OOOZRANB2-AS2.fasta	RP11-82L20.1,ZRANB2-AS2,NEGR1,
../firstrun/newGeneCopies/NEGR1/NEGR1_partitions/NEGR1_group1.fasta	../firstrun/newGeneCopies/NEGR1/NEGR1_partitions/NEGR1_group1_NEGR1OOOZRANB2-AS2.fasta	ZRANB2-AS2,NEGR1,
../firstrun/newGeneCopies/PHKG2/PHKG2_partitions/PHKG2_group1.fasta	../firstrun/newGeneCopies/PHKG2/PHKG2_partitions/PHKG2_group1_PHKG2OOOCCDC189OOORNF40.fasta	CCDC189,RP11-2C24.4,RNF40,PHKG2,
../firstrun/newGeneCopies/AMER1/AMER1_partitions/AMER1_group1.fasta	../firstrun/newGeneCopies/AMER1/AMER1_partitions/AMER1_group1_AMER1OOORP11-284B18v6.fasta	AMER1,RP11-284B18.6,
../firstrun/newGeneCopies/RNF208/RNF208_partitions/RNF208_group1.fasta	../firstrun/newGeneCopies/RNF208/RNF208_partitions/RNF208_group1_RNF208OOOCYSRT1OOONDOR1.fasta	NDOR1,RP13-122B23.13,CYSRT1,RNF224,RNF208,
../firstrun/newGeneCopies/PNPLA1/PNPLA1_partitions/PNPLA1_group1.fasta	../firstrun/newGeneCopies/PNPLA1/PNPLA1_partitions/PNPLA1_group1_PNPLA1OOOBNIP5.fasta	PNPLA1,BNIP5,
../firstrun/newGeneCopies/TIMM13/TIMM13_partitions/TIMM13_group1.fasta	../firstrun/newGeneCopies/TIMM13/TIMM13_partitions/TIMM13_group1_TIMM13OOOLMNB2OOOTMPRSS9.fasta	TIMM13,LMNB2,TMPRSS9,
../firstrun/newGeneCopies/MRPS36/MRPS36_partitions/MRPS36_group3.fasta	../firstrun/newGeneCopies/MRPS36/MRPS36_partitions/MRPS36_group3_MRPS36.fasta	MRPS36,
../firstrun/newGeneCopies/MAGEC3/MAGEC3_partitions/MAGEC3_group2.fasta	../firstrun/newGeneCopies/MAGEC3/MAGEC3_partitions/MAGEC3_group2_MAGEC3.fasta	MAGEC3,
../firstrun/newGeneCopies/MAGEC3/MAGEC3_partitions/MAGEC3_group1.fasta	../firstrun/newGeneCopies/MAGEC3/MAGEC3_partitions/MAGEC3_group1_MAGEC3.fasta	MAGEC3,
../firstrun/newGeneCopies/MAN2C1/MAN2C1_partitions/MAN2C1_group1.fasta	../firstrun/newGeneCopies/MAN2C1/MAN2C1_partitions/MAN2C1_group1_MAN2C1OOOMIR631OOONEIL1.fasta	RP11-817O13.8,SIN3A,NEIL1,MIR631,MAN2C1,
../firstrun/newGeneCopies/PLXNB3/PLXNB3_partitions/PLXNB3_group1.fasta	../firstrun/newGeneCopies/PLXNB3/PLXNB3_partitions/PLXNB3_group1_PLXNB3OOOSRPK3OOOU52111v14.fasta	SRPK3,PLXNB3,U52111.14,
../firstrun/newGeneCopies/CCDC173/CCDC173_partitions/CCDC173_group1.fasta	../firstrun/newGeneCopies/CCDC173/CCDC173_partitions/CCDC173_group1_CCDC173OOOAC016772v4OOOKLHL23.fasta	PHOSPHO2,AC016772.4,CCDC173,KLHL23,
../firstrun/newGeneCopies/SDCCAG8/SDCCAG8_partitions/SDCCAG8_group1.fasta	../firstrun/newGeneCopies/SDCCAG8/SDCCAG8_partitions/SDCCAG8_group1_SDCCAG8OOOCEP170OOOFCF1P7.fasta	MIR4677,SDCCAG8,CEP170,FCF1P7,
../firstrun/newGeneCopies/SDCCAG8/SDCCAG8_partitions/SDCCAG8_group3.fasta	../firstrun/newGeneCopies/SDCCAG8/SDCCAG8_partitions/SDCCAG8_group3_SDCCAG8OOOAKT3.fasta	SDCCAG8,AKT3,
../firstrun/newGeneCopies/RHOA/RHOA_partitions/RHOA_group1.fasta	../firstrun/newGeneCopies/RHOA/RHOA_partitions/RHOA_group1_RHOAOOORHOA-IT1OOOAMT.fasta	RP11-949J7.8,RHOA-IT1,RHOA,AMT,GPX1,TCTA,
../firstrun/newGeneCopies/NDUFV3/NDUFV3_partitions/NDUFV3_group1.fasta	../firstrun/newGeneCopies/NDUFV3/NDUFV3_partitions/NDUFV3_group1_NDUFV3OOOWDR4.fasta	WDR4,NDUFV3,
../firstrun/newGeneCopies/GZMM/GZMM_partitions/GZMM_group1.fasta	../firstrun/newGeneCopies/GZMM/GZMM_partitions/GZMM_group1_GZMMOOOCDC34.fasta	CDC34,GZMM,
../firstrun/newGeneCopies/LCN15/LCN15_partitions/LCN15_group1.fasta	../firstrun/newGeneCopies/LCN15/LCN15_partitions/LCN15_group1_LCN15OOOLCN8.fasta	LCN8,LCN15,
../firstrun/newGeneCopies/SLC12A4/SLC12A4_partitions/SLC12A4_group1.fasta	../firstrun/newGeneCopies/SLC12A4/SLC12A4_partitions/SLC12A4_group1_SLC12A4OOOLCAT.fasta	SLC12A4,LCAT,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group13.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group13_ASTN2.fasta	ASTN2,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group12.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group12_ASTN2.fasta	ASTN2,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group1.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group1_ASTN2OOOASTN2-AS1.fasta	ASTN2-AS1,ASTN2,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group6.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group6_ASTN2OOOTRIM32.fasta	TRIM32,ASTN2,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group16.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group16_ASTN2OOORN7SKP128.fasta	ASTN2,RN7SKP128,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group5.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group5_ASTN2.fasta	ASTN2,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group15.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group15_ASTN2.fasta	ASTN2,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group9.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group9_ASTN2OOORP11-305F14v1.fasta	RP11-305F14.1,ASTN2,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group4.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group4_ASTN2OOOASTN2-AS1OOORP11-67K19v3.fasta	ASTN2-AS1,RP11-67K19.3,ASTN2,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group18.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group18_ASTN2.fasta	ASTN2,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group8.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group8_ASTN2.fasta	ASTN2,
../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group14.fasta	../firstrun/newGeneCopies/ASTN2/ASTN2_partitions/ASTN2_group14_ASTN2.fasta	ASTN2,
../firstrun/newGeneCopies/TTC1/TTC1_partitions/TTC1_group1.fasta	../firstrun/newGeneCopies/TTC1/TTC1_partitions/TTC1_group1_TTC1OOOAC068657v2OOOPWWP2A.fasta	PWWP2A,AC068657.2,TTC1,Y_RNA,
../firstrun/newGeneCopies/PGA3/PGA3_partitions/PGA3_group1.fasta	../firstrun/newGeneCopies/PGA3/PGA3_partitions/PGA3_group1_PGA3OOOCTD-2331C18v5OOOPGA4.fasta	PGA4,PGA3,CTD-2331C18.5,PGA5,
../firstrun/newGeneCopies/PI4KB/PI4KB_partitions/PI4KB_group1.fasta	../firstrun/newGeneCopies/PI4KB/PI4KB_partitions/PI4KB_group1_PI4KBOOORN7SL444POOORP11-126K1v9.fasta	ZNF687,RN7SL444P,RP11-126K1.9,PI4KB,
../firstrun/newGeneCopies/AFP/AFP_partitions/AFP_group1.fasta	../firstrun/newGeneCopies/AFP/AFP_partitions/AFP_group1_AFP.fasta	AFP,
../firstrun/newGeneCopies/EIF2B5/EIF2B5_partitions/EIF2B5_group1.fasta	../firstrun/newGeneCopies/EIF2B5/EIF2B5_partitions/EIF2B5_group1_EIF2B5OOOEIF2B5-DTOOORP11-778D9v13.fasta	RP11-778D9.13,EIF2B5,EIF2B5-DT,
../firstrun/newGeneCopies/NISCH/NISCH_partitions/NISCH_group1.fasta	../firstrun/newGeneCopies/NISCH/NISCH_partitions/NISCH_group1_NISCHOOOSTAB1OOOTNNC1.fasta	TNNC1,STAB1,NISCH,
../firstrun/newGeneCopies/SDF4/SDF4_partitions/SDF4_group1.fasta	../firstrun/newGeneCopies/SDF4/SDF4_partitions/SDF4_group1_SDF4OOOB3GALT6OOOTNFRSF4.fasta	SDF4,B3GALT6,TNFRSF4,
../firstrun/newGeneCopies/PDZD/PDZD_partitions/PDZD_group27.fasta	../firstrun/newGeneCopies/PDZD/PDZD_partitions/PDZD_group27_PDZD9OOOCTD-2649C14v1OOOUQCRC2.fasta	PDZD9,CTD-2649C14.1,UQCRC2,
../firstrun/newGeneCopies/PDZD/PDZD_partitions/PDZD_group56.fasta	../firstrun/newGeneCopies/PDZD/PDZD_partitions/PDZD_group56_PDZD4OOOCYCSP45.fasta	CYCSP45,PDZD4,
../firstrun/newGeneCopies/LRP10/LRP10_partitions/LRP10_group1.fasta	../firstrun/newGeneCopies/LRP10/LRP10_partitions/LRP10_group1_LRP10OOOREM2.fasta	REM2,LRP10,
../firstrun/newGeneCopies/GPM6B/GPM6B_partitions/GPM6B_group7.fasta	../firstrun/newGeneCopies/GPM6B/GPM6B_partitions/GPM6B_group7_GPM6BOOOOFD1.fasta	GPM6B,OFD1,
../firstrun/newGeneCopies/GPM6B/GPM6B_partitions/GPM6B_group8.fasta	../firstrun/newGeneCopies/GPM6B/GPM6B_partitions/GPM6B_group8_GPM6B.fasta	GPM6B,
../firstrun/newGeneCopies/GPM6B/GPM6B_partitions/GPM6B_group10.fasta	../firstrun/newGeneCopies/GPM6B/GPM6B_partitions/GPM6B_group10_GPM6B.fasta	GPM6B,
../firstrun/newGeneCopies/GGN/GGN_partitions/GGN_group4.fasta	../firstrun/newGeneCopies/GGN/GGN_partitions/GGN_group4_GGNOOOAC005789v9OOOPSMD8.fasta	AC005789.9,GGN,PSMD8,SPRED3,
../firstrun/newGeneCopies/H2BC21/H2BC21_partitions/H2BC21_group5.fasta	../firstrun/newGeneCopies/H2BC21/H2BC21_partitions/H2BC21_group5_H2BC21OOOBOLA1OOOH2AC20.fasta	H2BC21,H2AC20,BOLA1,H2AC21,
../firstrun/newGeneCopies/POLR3/POLR3_partitions/POLR3_group3.fasta	../firstrun/newGeneCopies/POLR3/POLR3_partitions/POLR3_group3_POLR3GLOOOANKRD34AOOOCH17-270A2v1.fasta	POLR3GL,ANKRD34A,CH17-270A2.2,CH17-270A2.1,
../firstrun/newGeneCopies/POLR3/POLR3_partitions/POLR3_group23.fasta	../firstrun/newGeneCopies/POLR3/POLR3_partitions/POLR3_group23_POLR3HOOOACO2.fasta	POLR3H,ACO2,
../firstrun/newGeneCopies/POLR3/POLR3_partitions/POLR3_group18.fasta	../firstrun/newGeneCopies/POLR3/POLR3_partitions/POLR3_group18_POLR3EOOORP11-21M24v6.fasta	POLR3E,RP11-21M24.6,
../firstrun/newGeneCopies/PPIL/PPIL_partitions/PPIL_group7.fasta	../firstrun/newGeneCopies/PPIL/PPIL_partitions/PPIL_group7_PPIL2OOOKB-1440D3v13OOOKB-1440D3v15.fasta	KB-1440D3.16,PPIL2,YPEL1,KB-1440D3.19,KB-1440D3.18,KB-1440D3.13,KB-1440D3.15,KB-1440D3.17,
../firstrun/newGeneCopies/PPIL/PPIL_partitions/PPIL_group3.fasta	../firstrun/newGeneCopies/PPIL/PPIL_partitions/PPIL_group3_PPIL1OOOC6orf89OOORP3-431A14v8.fasta	C6orf89,RP3-431A14.8,PPIL1,
../firstrun/newGeneCopies/F8A1/F8A1_partitions/F8A1_group1.fasta	../firstrun/newGeneCopies/F8A1/F8A1_partitions/F8A1_group1_F8A1OOOF8OOOF8A2.fasta	F8A2,H2AB1,H2AB2,H2AB3,F8A1,F8A3,MIR1184-2,MIR1184-3,F8,MIR1184-1,
../firstrun/newGeneCopies/NQO1/NQO1_partitions/NQO1_group2.fasta	../firstrun/newGeneCopies/NQO1/NQO1_partitions/NQO1_group2_NQO1OOONQO1-DTOOOCTD-2033A16v1.fasta	RP11-311C24.1,CTD-2033A16.1,NQO1-DT,NFAT5,NQO1,NOB1,
../firstrun/newGeneCopies/FGF19/FGF19_partitions/FGF19_group1.fasta	../firstrun/newGeneCopies/FGF19/FGF19_partitions/FGF19_group1_FGF19.fasta	FGF19,
../firstrun/newGeneCopies/EIF4/EIF4_partitions/EIF4_group42.fasta	../firstrun/newGeneCopies/EIF4/EIF4_partitions/EIF4_group42_EIF4HOOOEIF4HP1OOOLAT2.fasta	LAT2,EIF4H,EIF4HP1,MIR590,PSMC1P2,
../firstrun/newGeneCopies/EIF4/EIF4_partitions/EIF4_group49.fasta	../firstrun/newGeneCopies/EIF4/EIF4_partitions/EIF4_group49_EIF4BOOOEIF4BP3OOOEIF4BP6.fasta	LHFPL3,RP11-983P16.2,EIF4BP7,EIF4BP3,RP11-111F16.2,RP11-983P16.4,RPL18AP15,EIF4B,EIF4BP6,
../firstrun/newGeneCopies/EIF4/EIF4_partitions/EIF4_group95.fasta	../firstrun/newGeneCopies/EIF4/EIF4_partitions/EIF4_group95_EIF4A3OOORP11-334C17v3OOORP11-334C17v6.fasta	RP11-334C17.3,RP11-334C17.6,EIF4A3,
../firstrun/newGeneCopies/ZNF850/ZNF850_partitions/ZNF850_group18.fasta	../firstrun/newGeneCopies/ZNF850/ZNF850_partitions/ZNF850_group18_ZNF850OOOCTD-2162K18v3OOOCTD-2162K18v4.fasta	CTD-2162K18.4,ZNF850,CTD-2162K18.3,ZNF567,
../firstrun/newGeneCopies/RHNO1/RHNO1_partitions/RHNO1_group1.fasta	../firstrun/newGeneCopies/RHNO1/RHNO1_partitions/RHNO1_group1_RHNO1OOOFOXM1OOORP11-372B4v3.fasta	TULP3,FOXM1,RP11-372B4.3,RHNO1,
../firstrun/newGeneCopies/ZRANB2/ZRANB2_partitions/ZRANB2_group1.fasta	../firstrun/newGeneCopies/ZRANB2/ZRANB2_partitions/ZRANB2_group1_ZRANB2OOOZRANB2-AS1OOOZRANB2-AS2.fasta	ZRANB2-AS2,MIR186,ZRANB2-AS1,ZRANB2,PTGER3,
../firstrun/newGeneCopies/PIP5K/PIP5K_partitions/PIP5K_group1.fasta	../firstrun/newGeneCopies/PIP5K/PIP5K_partitions/PIP5K_group1_PIP5K1AOOOPIPSLOOOSLC35G1.fasta	PIP5K1A,VPS72,PIPSL,SLC35G1,
../firstrun/newGeneCopies/PLCD3/PLCD3_partitions/PLCD3_group1.fasta	../firstrun/newGeneCopies/PLCD3/PLCD3_partitions/PLCD3_group1_PLCD3OOOACBD4OOOMIR6784.fasta	PLCD3,NMT1,ACBD4,MIR6784,
../firstrun/newGeneCopies/SLC47A/SLC47A_partitions/SLC47A_group40.fasta	../firstrun/newGeneCopies/SLC47A/SLC47A_partitions/SLC47A_group40_SLC47A1OOOSLC47A1P1OOOSLC47A1P2.fasta	AC004448.5,RP11-1113L8.6,MTND1P14,RPL17P43,NMTRQ-TTG12-1,SNORA59B,MTCO1P39,SLC47A1P1,RP11-1113L8.7,SLC47A1,RP11-1113L8.2,MTND2P12,SLC47A1P2,RP11-1113L8.1,
../firstrun/newGeneCopies/SLC47A/SLC47A_partitions/SLC47A_group42.fasta	../firstrun/newGeneCopies/SLC47A/SLC47A_partitions/SLC47A_group42_SLC47A2OOOALDH3A2OOORP11-311F12v1.fasta	RP11-311F12.1,ALDH3A2,SLC47A2,
../firstrun/newGeneCopies/NPM1/NPM1_partitions/NPM1_group47.fasta	../firstrun/newGeneCopies/NPM1/NPM1_partitions/NPM1_group47_NPM1OOOMIR3912.fasta	MIR3912,NPM1,
../firstrun/newGeneCopies/OFD1/OFD1_partitions/OFD1_group19.fasta	../firstrun/newGeneCopies/OFD1/OFD1_partitions/OFD1_group19_OFD1OOOGPM6BOOOTRAPPC2.fasta	OFD1,TRAPPC2,GPM6B,
../firstrun/newGeneCopies/RP4-583P15.14/RP4-583P15.14_partitions/RP4-583P15.14_group1.fasta	../firstrun/newGeneCopies/RP4-583P15.14/RP4-583P15.14_partitions/RP4-583P15.14_group1_RP4-583P15v14OOOLIME1OOORP4-583P15v10.fasta	RP4-583P15.14,ZBTB46,ZGPAT,LIME1,SLC2A4RG,RP4-583P15.15,RP4-583P15.10,
../firstrun/newGeneCopies/CCDC127/CCDC127_partitions/CCDC127_group33.fasta	../firstrun/newGeneCopies/CCDC127/CCDC127_partitions/CCDC127_group33_CCDC127OOOCTD-2012J19v2OOOCTD-2012J19v3.fasta	RP11-43F13.1,SDHA,LRRC14B,SDHAP3,CTD-2012J19.2,CTD-2083E4.4,CTD-2546F11.1,CCDC127,CTD-2083E4.7,CTD-2012J19.3,
../firstrun/newGeneCopies/G6PC2/G6PC2_partitions/G6PC2_group1.fasta	../firstrun/newGeneCopies/G6PC2/G6PC2_partitions/G6PC2_group1_G6PC2OOOSPC25.fasta	G6PC2,SPC25,
../firstrun/newGeneCopies/RBM14/RBM14_partitions/RBM14_group2.fasta	../firstrun/newGeneCopies/RBM14/RBM14_partitions/RBM14_group2_RBM14OOORBM14-RBM4OOORBM4.fasta	RNU4-39P,RBM14,RBM4,RBM14-RBM4,
../firstrun/newGeneCopies/LYSMD1/LYSMD1_partitions/LYSMD1_group1.fasta	../firstrun/newGeneCopies/LYSMD1/LYSMD1_partitions/LYSMD1_group1_LYSMD1OOOSCNM1OOOTMOD4.fasta	TNFAIP8L2,LYSMD1,TMOD4,SCNM1,
../firstrun/newGeneCopies/FSCB/FSCB_partitions/FSCB_group1.fasta	../firstrun/newGeneCopies/FSCB/FSCB_partitions/FSCB_group1_FSCBOOORP11-163M18v1.fasta	RP11-163M18.1,FSCB,
../firstrun/newGeneCopies/HLA-DO/HLA-DO_partitions/HLA-DO_group2.fasta	../firstrun/newGeneCopies/HLA-DO/HLA-DO_partitions/HLA-DO_group2_HLA-DOA.fasta	HLA-DOA,
../firstrun/newGeneCopies/HLA-DO/HLA-DO_partitions/HLA-DO_group1.fasta	../firstrun/newGeneCopies/HLA-DO/HLA-DO_partitions/HLA-DO_group1_HLA-DOBOOOTAP2OOOXXbac-BPG246D15v9.fasta	HLA-DOB,XXbac-BPG246D15.9,TAP2,
../firstrun/newGeneCopies/SRCAP/SRCAP_partitions/SRCAP_group1.fasta	../firstrun/newGeneCopies/SRCAP/SRCAP_partitions/SRCAP_group1_SRCAPOOORNU6-1043POOORP11-146F11v1.fasta	SNORA30,RP11-2C24.9,RP11-146F11.1,RNU6-1043P,TMEM265,RP11-2C24.4,SRCAP,
../firstrun/newGeneCopies/ASAH2/ASAH2_partitions/ASAH2_group4.fasta	../firstrun/newGeneCopies/ASAH2/ASAH2_partitions/ASAH2_group4_ASAH2OOOASAH2BOOOA1CF.fasta	RP11-564C4.10,DYNC1I2P1,A1CF,RP11-479O17.12,ASAH2B,BMS1P21,ASAH2,
../firstrun/newGeneCopies/MRPL9/MRPL9_partitions/MRPL9_group1.fasta	../firstrun/newGeneCopies/MRPL9/MRPL9_partitions/MRPL9_group1_MRPL9OOOOAZ3OOORP11-98D18v15.fasta	RP11-98D18.16,OAZ3,RP11-98D18.3,RP11-98D18.15,MRPL9,RP11-98D18.7,RP11-98D18.2,
../firstrun/newGeneCopies/FAM90/FAM90_partitions/FAM90_group1.fasta	../firstrun/newGeneCopies/FAM90/FAM90_partitions/FAM90_group1_FAM90A1OOOFAM90A10POOOFAM90A11P.fasta	RP11-351I21.11,FAM90A13P,TSSC2,FAM86LP,FAM90A21P,FAM90A1,FAM90A14P,ENSG00000288396,FAM90A19P,DEFB109F,FAM90A6P,RP11-266K4.14,RP11-740N7.4,FAM90A18P,FAM90A9P,RP11-10K17.3,ALG1,ALG1L12P,ALG1L14P,FAM90A26,FAM86B3P,RP11-1396O13.23,ALG1L13P,ALG1L10P,FAM90A22P,FAM90A10P,FAM66D,OR7E12P,FAM90A24P,ALG1L3P,FAM90A4P,ALG1L8P,FAM90A12P,ALG1L7P,Metazoa_SRP,FAM90A20P,FAM90A7P,OR7E11P,FAM86HP,ALG1L,FAM90A23P,FAM86EP,AC226119.5,FAM90A5P,FAM90A17P,FAM90A11P,FAM90A2P,FAM86C2P,ALG1L5P,ALG1L2,EEF2KMT,FAM86JP,FAM90A3P,FAM86DP,FAM90A15P,ALG1L9P,LINC02014,ALG1L11P,FAM86B1,FAM90A16P,FAM86GP,FAM66B,FAM90A8P,FAM90A25P,ALG1L6P,FAM86MP,FAM86C1P,
../firstrun/newGeneCopies/JMY/JMY_partitions/JMY_group1.fasta	../firstrun/newGeneCopies/JMY/JMY_partitions/JMY_group1_JMYOOODMGDHOOORPS3AP20.fasta	JMY,DMGDH,RPS3AP20,
../firstrun/newGeneCopies/KCNMB3/KCNMB3_partitions/KCNMB3_group1.fasta	../firstrun/newGeneCopies/KCNMB3/KCNMB3_partitions/KCNMB3_group1_KCNMB3OOOKCNMB3P1OOOCCT8L1P.fasta	CCT8L1P,PIK3CA,KCNMB3,LRRFIP1,LRRFIP1P1,KB-67B5.12,KCNMB3P1,
../firstrun/newGeneCopies/DHTKD1/DHTKD1_partitions/DHTKD1_group1.fasta	../firstrun/newGeneCopies/DHTKD1/DHTKD1_partitions/DHTKD1_group1_DHTKD1OOOMIR548AKOOORNU6-88P.fasta	DHTKD1,MIR548AK,SEC61A2,RNU6-88P,
../firstrun/newGeneCopies/LMBR1L/LMBR1L_partitions/LMBR1L_group1.fasta	../firstrun/newGeneCopies/LMBR1L/LMBR1L_partitions/LMBR1L_group1_LMBR1LOOODHH.fasta	LMBR1L,DHH,
../firstrun/newGeneCopies/MIER2/MIER2_partitions/MIER2_group1.fasta	../firstrun/newGeneCopies/MIER2/MIER2_partitions/MIER2_group1_MIER2OOOCTD-3113P16v5.fasta	CTD-3113P16.5,MIER2,
../firstrun/newGeneCopies/DMGDH/DMGDH_partitions/DMGDH_group3.fasta	../firstrun/newGeneCopies/DMGDH/DMGDH_partitions/DMGDH_group3_DMGDHOOOCTC-422A18v1OOOCTC-422A18v2.fasta	ENSG10010137616.1,CTC-422A18.1,JMY,DMGDH,CTC-422A18.2,
../firstrun/newGeneCopies/DMGDH/DMGDH_partitions/DMGDH_group1.fasta	../firstrun/newGeneCopies/DMGDH/DMGDH_partitions/DMGDH_group1_DMGDHOOOBHMTOOOBHMT2.fasta	CTD-2299I21.1,DMGDH,BHMT2,BHMT,
../firstrun/newGeneCopies/PSRC1/PSRC1_partitions/PSRC1_group1.fasta	../firstrun/newGeneCopies/PSRC1/PSRC1_partitions/PSRC1_group1_PSRC1OOOCELSR2.fasta	CELSR2,PSRC1,
../firstrun/newGeneCopies/RHD/RHD_partitions/RHD_group1.fasta	../firstrun/newGeneCopies/RHD/RHD_partitions/RHD_group1_RHDOOORHCEOOORP3-465N24v5.fasta	RP3-469D22.1,RSRP1,RP3-465N24.5,RHCE,SDHDP6,TMEM50A,RHD,
../firstrun/newGeneCopies/B4GALT7/B4GALT7_partitions/B4GALT7_group1.fasta	../firstrun/newGeneCopies/B4GALT7/B4GALT7_partitions/B4GALT7_group1_B4GALT7OOORP11-1277A3v1OOOTMED9.fasta	TMED9,RP11-1277A3.1,B4GALT7,
../firstrun/newGeneCopies/RP1-37C10.8/RP1-37C10.8_partitions/RP1-37C10.8_group1.fasta	../firstrun/newGeneCopies/RP1-37C10.8/RP1-37C10.8_partitions/RP1-37C10.8_group1_RP1-37C10v8OOOATP13A2OOORP1-37C10v3.fasta	RP1-37C10.3,ATP13A2,RP1-37C10.8,
../firstrun/newGeneCopies/TEAD3/TEAD3_partitions/TEAD3_group1.fasta	../firstrun/newGeneCopies/TEAD3/TEAD3_partitions/TEAD3_group1_TEAD3OOORPL10AOOOTULP1.fasta	TULP1,TEAD3,RPL10A,
../firstrun/newGeneCopies/CCDC50/CCDC50_partitions/CCDC50_group1.fasta	../firstrun/newGeneCopies/CCDC50/CCDC50_partitions/CCDC50_group1_CCDC50OOOUTS2B.fasta	CCDC50,UTS2B,
../firstrun/newGeneCopies/ADGB/ADGB_partitions/ADGB_group1.fasta	../firstrun/newGeneCopies/ADGB/ADGB_partitions/ADGB_group1_ADGBOOORP11-715G15v1.fasta	ADGB,RP11-715G15.1,
../firstrun/newGeneCopies/ADGB/ADGB_partitions/ADGB_group3.fasta	../firstrun/newGeneCopies/ADGB/ADGB_partitions/ADGB_group3_ADGBOOOKATNBL1P6.fasta	KATNBL1P6,ADGB,
../firstrun/newGeneCopies/ADGB/ADGB_partitions/ADGB_group2.fasta	../firstrun/newGeneCopies/ADGB/ADGB_partitions/ADGB_group2_ADGBOOORNU6-906POOORP11-715G15v2.fasta	RNU6-906P,RP11-715G15.2,ADGB,
../firstrun/newGeneCopies/VASH1/VASH1_partitions/VASH1_group1.fasta	../firstrun/newGeneCopies/VASH1/VASH1_partitions/VASH1_group1_VASH1OOOVASH1-AS1OOOANGEL1.fasta	RP11-488C13.6,RP11-488C13.7,VASH1,RP11-99E15.2,ANGEL1,VASH1-AS1,
../firstrun/newGeneCopies/THEG/THEG_partitions/THEG_group4.fasta	../firstrun/newGeneCopies/THEG/THEG_partitions/THEG_group4_THEG.fasta	THEG,
../firstrun/newGeneCopies/C1QTNF12/C1QTNF12_partitions/C1QTNF12_group1.fasta	../firstrun/newGeneCopies/C1QTNF12/C1QTNF12_partitions/C1QTNF12_group1_C1QTNF12OOORP5-902P8v12.fasta	C1QTNF12,RP5-902P8.12,
../firstrun/newGeneCopies/TKTL1/TKTL1_partitions/TKTL1_group7.fasta	../firstrun/newGeneCopies/TKTL1/TKTL1_partitions/TKTL1_group7_TKTL1OOOTEX28.fasta	TKTL1,TEX28,
../firstrun/newGeneCopies/SMPD3/SMPD3_partitions/SMPD3_group1.fasta	../firstrun/newGeneCopies/SMPD3/SMPD3_partitions/SMPD3_group1_SMPD3OOOPRMT7OOORP11-71L14v3.fasta	RP11-71L14.5,SMPD3,RP11-71L14.3,PRMT7,RP11-71L14.4,
../firstrun/newGeneCopies/ZNF664/ZNF664_partitions/ZNF664_group1.fasta	../firstrun/newGeneCopies/ZNF664/ZNF664_partitions/ZNF664_group1_ZNF664OOOCCDC92OOORFLNA.fasta	RP11-214K3.25,RP11-214K3.5,RP11-214K3.19,ZNF664,RP11-214K3.18,CCDC92,RFLNA,
../firstrun/newGeneCopies/ABCB9/ABCB9_partitions/ABCB9_group1.fasta	../firstrun/newGeneCopies/ABCB9/ABCB9_partitions/ABCB9_group1_ABCB9OOOARL6IP4OOOOGFOD2.fasta	ARL6IP4,ABCB9,RP11-197N18.2,OGFOD2,PITPNM2,
../firstrun/newGeneCopies/ELMO3/ELMO3_partitions/ELMO3_group1.fasta	../firstrun/newGeneCopies/ELMO3/ELMO3_partitions/ELMO3_group1_ELMO3OOOCTC-277H1v6OOOE2F4.fasta	CTC-277H1.6,MIR328,LRRC29,E2F4,ELMO3,
../firstrun/newGeneCopies/HIC1/HIC1_partitions/HIC1_group1.fasta	../firstrun/newGeneCopies/HIC1/HIC1_partitions/HIC1_group1_HIC1OOOSMG6.fasta	SMG6,HIC1,
../firstrun/newGeneCopies/RPL35A/RPL35A_partitions/RPL35A_group8.fasta	../firstrun/newGeneCopies/RPL35A/RPL35A_partitions/RPL35A_group8_RPL35AOOOIQCG.fasta	RPL35A,IQCG,
../firstrun/newGeneCopies/TNNT1/TNNT1_partitions/TNNT1_group1.fasta	../firstrun/newGeneCopies/TNNT1/TNNT1_partitions/TNNT1_group1_TNNT1OOOTNNI3.fasta	TNNT1,TNNI3,
../firstrun/newGeneCopies/CDY1/CDY1_partitions/CDY1_group1.fasta	../firstrun/newGeneCopies/CDY1/CDY1_partitions/CDY1_group1_CDY1OOOCDY17POOOCDY1B.fasta	CDY2A,CDY6P,CDY1B,CDY2B,CDY1,CDY20P,CDY17P,CDY8P,
../firstrun/newGeneCopies/GABRA5/GABRA5_partitions/GABRA5_group1.fasta	../firstrun/newGeneCopies/GABRA5/GABRA5_partitions/GABRA5_group1_GABRA5OOOGABRB3.fasta	GABRB3,GABRA5,
../firstrun/newGeneCopies/SLC51A/SLC51A_partitions/SLC51A_group1.fasta	../firstrun/newGeneCopies/SLC51A/SLC51A_partitions/SLC51A_group1_SLC51AOOOPCYT1AOOOZDHHC19.fasta	PCYT1A,ZDHHC19,SLC51A,
../firstrun/newGeneCopies/ITIH4/ITIH4_partitions/ITIH4_group1.fasta	../firstrun/newGeneCopies/ITIH4/ITIH4_partitions/ITIH4_group1_ITIH4OOOITIH4-AS1OOOMUSTN1.fasta	RP5-966M1.6,MUSTN1,STIMATE-MUSTN1,ITIH4-AS1,ITIH4,
../firstrun/newGeneCopies/SERF2/SERF2_partitions/SERF2_group1.fasta	../firstrun/newGeneCopies/SERF2/SERF2_partitions/SERF2_group1_SERF2OOOELL3OOOHYPK.fasta	SERINC4,ELL3,HYPK,MFAP1,MIR1282,SERF2,RP11-296A16.1,
../firstrun/newGeneCopies/ZNF790/ZNF790_partitions/ZNF790_group4.fasta	../firstrun/newGeneCopies/ZNF790/ZNF790_partitions/ZNF790_group4_ZNF790OOOZNF790-AS1OOOCTD-3162L10v1.fasta	ZNF875,ZNF345,CTD-3162L10.1,ZNF790,ZNF790-AS1,Y_RNA,LINC00665,ZFP14,CTD-3220F14.3,
../firstrun/newGeneCopies/CDRT15/CDRT15_partitions/CDRT15_group43.fasta	../firstrun/newGeneCopies/CDRT15/CDRT15_partitions/CDRT15_group43_CDRT15OOOCDRT15L2OOOCDRT15P1.fasta	ZSWIM5P2,CDRT15P1,CDRT15,COX10-AS1,CDRT15P2,CDRT15L2,COX10,AC005324.7,RP11-434D2.12,ZSWIM5P1,
../firstrun/newGeneCopies/FGFRL1/FGFRL1_partitions/FGFRL1_group1.fasta	../firstrun/newGeneCopies/FGFRL1/FGFRL1_partitions/FGFRL1_group1_FGFRL1OOORP11-460I19v2.fasta	RP11-460I19.2,FGFRL1,
../firstrun/newGeneCopies/CST6/CST6_partitions/CST6_group1.fasta	../firstrun/newGeneCopies/CST6/CST6_partitions/CST6_group1_CST6OOOCATSPER1.fasta	CST6,CATSPER1,
../firstrun/newGeneCopies/AIG1/AIG1_partitions/AIG1_group2.fasta	../firstrun/newGeneCopies/AIG1/AIG1_partitions/AIG1_group2_AIG1OOOLINC01277OOORP1-45I4v2.fasta	AIG1,RP1-45I4.2,LINC01277,
../firstrun/newGeneCopies/AIG1/AIG1_partitions/AIG1_group3.fasta	../firstrun/newGeneCopies/AIG1/AIG1_partitions/AIG1_group3_AIG1.fasta	AIG1,
../firstrun/newGeneCopies/AIG1/AIG1_partitions/AIG1_group6.fasta	../firstrun/newGeneCopies/AIG1/AIG1_partitions/AIG1_group6_AIG1OOORP1-95L4v2.fasta	AIG1,RP1-95L4.2,
../firstrun/newGeneCopies/AIG1/AIG1_partitions/AIG1_group7.fasta	../firstrun/newGeneCopies/AIG1/AIG1_partitions/AIG1_group7_AIG1OOORP1-95L4v3OOORP1-95L4v4.fasta	RP1-95L4.4,AIG1,RP1-95L4.3,
../firstrun/newGeneCopies/AIG1/AIG1_partitions/AIG1_group5.fasta	../firstrun/newGeneCopies/AIG1/AIG1_partitions/AIG1_group5_AIG1.fasta	AIG1,
../firstrun/newGeneCopies/FAM136/FAM136_partitions/FAM136_group1.fasta	../firstrun/newGeneCopies/FAM136/FAM136_partitions/FAM136_group1_FAM136AOOOAC022201v5OOOSNRPG.fasta	SNRPG,AC022201.5,FAM136A,
../firstrun/newGeneCopies/RFTN1/RFTN1_partitions/RFTN1_group4.fasta	../firstrun/newGeneCopies/RFTN1/RFTN1_partitions/RFTN1_group4_RFTN1.fasta	RFTN1,
../firstrun/newGeneCopies/RFTN1/RFTN1_partitions/RFTN1_group2.fasta	../firstrun/newGeneCopies/RFTN1/RFTN1_partitions/RFTN1_group2_RFTN1OOORFTN1P1OOOAC007274v5.fasta	TTTY12,AC007274.5,RP11-224E16.1,TTTY16,RFTN1P1,RFTN1,RP11-415F23.5,
../firstrun/newGeneCopies/RFTN1/RFTN1_partitions/RFTN1_group1.fasta	../firstrun/newGeneCopies/RFTN1/RFTN1_partitions/RFTN1_group1_RFTN1OOOOXNAD1OOORP11-415F23v2.fasta	RFTN1,RP11-415F23.2,RP11-415F23.3,OXNAD1,
../firstrun/newGeneCopies/PTPN20/PTPN20_partitions/PTPN20_group1.fasta	../firstrun/newGeneCopies/PTPN20/PTPN20_partitions/PTPN20_group1_PTPN20OOOPTPN20CPOOOBMS1P7.fasta	PTPN20CP,BMS1P7,PTPN20,
../firstrun/newGeneCopies/GPR61/GPR61_partitions/GPR61_group1.fasta	../firstrun/newGeneCopies/GPR61/GPR61_partitions/GPR61_group1_GPR61OOOGNAI3OOORP5-1160K1v8.fasta	GPR61,GNAI3,RP5-1160K1.8,
../firstrun/newGeneCopies/LRTOMT/LRTOMT_partitions/LRTOMT_group1.fasta	../firstrun/newGeneCopies/LRTOMT/LRTOMT_partitions/LRTOMT_group1_LRTOMTOOOLAMTOR1OOONUMA1.fasta	RP11-807H22.10,LRTOMT,LAMTOR1,NUMA1,
../firstrun/newGeneCopies/RFX5/RFX5_partitions/RFX5_group1.fasta	../firstrun/newGeneCopies/RFX5/RFX5_partitions/RFX5_group1_RFX5OOORFX5-AS1OOORP11-126K1v8.fasta	RP11-126K1.8,RFX5-AS1,RFX5,
../firstrun/newGeneCopies/RTP5/RTP5_partitions/RTP5_group1.fasta	../firstrun/newGeneCopies/RTP5/RTP5_partitions/RTP5_group1_RTP5.fasta	RTP5,
../firstrun/newGeneCopies/DAP3/DAP3_partitions/DAP3_group3.fasta	../firstrun/newGeneCopies/DAP3/DAP3_partitions/DAP3_group3_DAP3OOOASH1LOOOASH1L-AS1.fasta	YY1AP1,ASH1L,DAP3,RP11-29H23.7,RP11-243J18.2,ASH1L-AS1,
../firstrun/newGeneCopies/USP22/USP22_partitions/USP22_group1.fasta	../firstrun/newGeneCopies/USP22/USP22_partitions/USP22_group1_USP22OOOCCDC144NL-AS1OOORP11-746M1v1.fasta	CCDC144NL-AS1,RP11-746M1.1,USP22,
../firstrun/newGeneCopies/ARMC5/ARMC5_partitions/ARMC5_group16.fasta	../firstrun/newGeneCopies/ARMC5/ARMC5_partitions/ARMC5_group16_ARMC5OOORP11-452L6v1OOORP11-452L6v5.fasta	RP11-452L6.5,RP11-452L6.1,ARMC5,
../firstrun/newGeneCopies/BTN2A/BTN2A_partitions/BTN2A_group1.fasta	../firstrun/newGeneCopies/BTN2A/BTN2A_partitions/BTN2A_group1_BTN2A1OOOBTN2A2OOOBTN2A3P.fasta	BTN2A3P,BTN1A1P1,BTN2A1,BTN2A2,
../firstrun/newGeneCopies/DEFB121/DEFB121_partitions/DEFB121_group1.fasta	../firstrun/newGeneCopies/DEFB121/DEFB121_partitions/DEFB121_group1_DEFB121.fasta	DEFB121,
../firstrun/newGeneCopies/POLR1/POLR1_partitions/POLR1_group12.fasta	../firstrun/newGeneCopies/POLR1/POLR1_partitions/POLR1_group12_POLR1DOOOLNX2.fasta	POLR1D,LNX2,
../firstrun/newGeneCopies/POLR1/POLR1_partitions/POLR1_group13.fasta	../firstrun/newGeneCopies/POLR1/POLR1_partitions/POLR1_group13_POLR1DOOORP11-87C7v3.fasta	POLR1D,RP11-87C7.3,
../firstrun/newGeneCopies/POLR1/POLR1_partitions/POLR1_group4.fasta	../firstrun/newGeneCopies/POLR1/POLR1_partitions/POLR1_group4_POLR1AOOOPTCD3.fasta	POLR1A,PTCD3,
../firstrun/newGeneCopies/POLR1/POLR1_partitions/POLR1_group14.fasta	../firstrun/newGeneCopies/POLR1/POLR1_partitions/POLR1_group14_POLR1D.fasta	POLR1D,
../firstrun/newGeneCopies/TMEM52/TMEM52_partitions/TMEM52_group1.fasta	../firstrun/newGeneCopies/TMEM52/TMEM52_partitions/TMEM52_group1_TMEM52OOOCALML6OOOCFAP74.fasta	TMEM52,CALML6,CFAP74,
../firstrun/newGeneCopies/PRSS3/PRSS3_partitions/PRSS3_group5.fasta	../firstrun/newGeneCopies/PRSS3/PRSS3_partitions/PRSS3_group5_PRSS3OOORP11-507F16v5OOOTMEM45B.fasta	TMEM45B,UBE2R2-AS1,PRSS3,RP11-507F16.5,
../firstrun/newGeneCopies/PRSS3/PRSS3_partitions/PRSS3_group3.fasta	../firstrun/newGeneCopies/PRSS3/PRSS3_partitions/PRSS3_group3_PRSS3OOOPRSS3P1OOOPRSS3P2.fasta	TRBV20OR9-2,CH17-112M04.1,PRSS1,TRY7,PRSS3P4,PRSS3,PRSS3P2,PRSS2,PRSS3P1,WBP1LP1,CYP4F26P,UBE2R2-AS1,TRBV29-1,TRBV29OR9-2,
../firstrun/newGeneCopies/ZNF76/ZNF76_partitions/ZNF76_group1.fasta	../firstrun/newGeneCopies/ZNF76/ZNF76_partitions/ZNF76_group1_ZNF76OOODEF6OOORP3-329A5v1.fasta	DEF6,ZNF76,RP3-329A5.1,
../firstrun/newGeneCopies/NACA/NACA_partitions/NACA_group9.fasta	../firstrun/newGeneCopies/NACA/NACA_partitions/NACA_group9_NACAOOOPRIM1OOORP11-112B10v2.fasta	RP11-112B10.2,PRIM1,NACA,
../firstrun/newGeneCopies/GCNA/GCNA_partitions/GCNA_group3.fasta	../firstrun/newGeneCopies/GCNA/GCNA_partitions/GCNA_group3_GCNAOOOCXCR3OOOOGT.fasta	OGT,CXCR3,GCNA,
../firstrun/newGeneCopies/ARSL/ARSL_partitions/ARSL_group1.fasta	../firstrun/newGeneCopies/ARSL/ARSL_partitions/ARSL_group1_ARSLOOOARSLP1OOOGYG2P1.fasta	GYG2P1,ARSLP1,ARSL,
../firstrun/newGeneCopies/DEFB106/DEFB106_partitions/DEFB106_group1.fasta	../firstrun/newGeneCopies/DEFB106/DEFB106_partitions/DEFB106_group1_DEFB106AOOODEFB106BOOODEFB105A.fasta	DEFB105A,DEFB106B,DEFB105B,DEFB106A,
../firstrun/newGeneCopies/CTSW/CTSW_partitions/CTSW_group1.fasta	../firstrun/newGeneCopies/CTSW/CTSW_partitions/CTSW_group1_CTSWOOOEFEMP2OOOFIBP.fasta	FIBP,EFEMP2,CTSW,
../firstrun/newGeneCopies/PRR20/PRR20_partitions/PRR20_group2.fasta	../firstrun/newGeneCopies/PRR20/PRR20_partitions/PRR20_group2_PRR20AOOOPRR20BOOOPRR20C.fasta	PRR20D,PRR20E,PRR20FP,PRR20B,PRR20A,PRR20C,
../firstrun/newGeneCopies/PRR20/PRR20_partitions/PRR20_group1.fasta	../firstrun/newGeneCopies/PRR20/PRR20_partitions/PRR20_group1_PRR20G.fasta	PRR20G,
../firstrun/newGeneCopies/PDPK1/PDPK1_partitions/PDPK1_group1.fasta	../firstrun/newGeneCopies/PDPK1/PDPK1_partitions/PDPK1_group1_PDPK1OOOAC141586v5OOOCTD-2270P14v2.fasta	PDPK1,RP11-20I23.10,PDPK2P,RP11-20I23.8,CTD-3126B10.1,AC141586.5,CTD-2270P14.2,RP11-20I23.6,RP11-20I23.5,ERVK13-1,RP11-20I23.13,CTD-3126B10.2,CTD-3126B10.4,RP11-20I23.7,KCTD5,RP11-20I23.11,CTD-3126B10.5,
../firstrun/newGeneCopies/TSGA10IP/TSGA10IP_partitions/TSGA10IP_group1.fasta	../firstrun/newGeneCopies/TSGA10IP/TSGA10IP_partitions/TSGA10IP_group1_TSGA10IPOOOSART1.fasta	TSGA10IP,SART1,
../firstrun/newGeneCopies/RPL17/RPL17_partitions/RPL17_group42.fasta	../firstrun/newGeneCopies/RPL17/RPL17_partitions/RPL17_group42_RPL17OOORPL17-C18orf32OOOC18orf32.fasta	RPL17,RP11-110H1.4,RPL17-C18orf32,MIR1539,SNORD58A,SNORD58C,SRP72P1,C18orf32,SNORD58B,
../firstrun/newGeneCopies/ZFP82/ZFP82_partitions/ZFP82_group1.fasta	../firstrun/newGeneCopies/ZFP82/ZFP82_partitions/ZFP82_group1_ZFP82OOOCTD-3162L10v3OOOCTD-3162L10v4.fasta	ZFP82,CTD-3162L10.5,CTD-3162L10.4,ZFP14,CTD-3162L10.3,
../firstrun/newGeneCopies/AC007326.13/AC007326.13_partitions/AC007326.13_group0131602.fasta	../firstrun/newGeneCopies/AC007326.13/AC007326.13_partitions/AC007326.13_group0131602_AC007326v13OOOAC007326v10OOOAC007326v11.fasta	RP11-29H23.8,ERVK-28,AC007326.10,RTN4R,RP11-572M11.4,XXbac-B444P24.10,AC007326.13,AC007326.11,DEFB107B,RP11-29H23.5,PRODH,RP11-420K14.1,ENSG00000277196,CTB-151G24.2,SGCD,
../firstrun/newGeneCopies/PCDHGA/PCDHGA_partitions/PCDHGA_group1.fasta	../firstrun/newGeneCopies/PCDHGA/PCDHGA_partitions/PCDHGA_group1_PCDHGA1OOOPCDHGA10OOOPCDHGA11.fasta	PCDHGA7,PCDHGC3,PCDHGA1,PCDHGA2,AC005618.8,PCDHGB7,PCDHGB6,AC005618.6,PCDHGA9,CTD-2024I7.18,PCDHGA10,PCDHGB4,PCDHGA11,PCDHGB9P,PCDHGA3,AC005618.9,PCDHGA5,PCDHGB3,PCDHGB2,PCDHGB5,PCDHGA8,PCDHGA6,PCDHGA12,PCDHGA4,PCDHGB1,RN7SL68P,AC005618.10,PCDHGB8P,
../firstrun/newGeneCopies/PCDHGA/PCDHGA_partitions/PCDHGA_group2.fasta	../firstrun/newGeneCopies/PCDHGA/PCDHGA_partitions/PCDHGA_group2_PCDHGA1OOOPCDHGA10OOOPCDHGA11.fasta	PCDHGA7,PCDHGC3,PCDHGA1,PCDHGA2,PCDHGC5,PCDHGB7,PCDHGB6,DIAPH1,PCDHGA9,PCDHGA10,PCDHGB4,PCDHGA11,PCDHGA3,PCDHGA5,PCDHGB3,PCDHGB2,PCDHGB5,PCDHGA8,PCDHGA6,PCDHGA12,PCDHGA4,PCDHGB1,PCDHGC4,
../firstrun/newGeneCopies/MSX1/MSX1_partitions/MSX1_group1.fasta	../firstrun/newGeneCopies/MSX1/MSX1_partitions/MSX1_group1_MSX1.fasta	MSX1,
../firstrun/newGeneCopies/DIAPH1/DIAPH1_partitions/DIAPH1_group1.fasta	../firstrun/newGeneCopies/DIAPH1/DIAPH1_partitions/DIAPH1_group1_DIAPH1OOOPCDHGA1OOOPCDHGA10.fasta	PCDHGC5,PCDHGC3,PCDHGB2,PCDHGA12,PCDHGB1,PCDHGB4,PCDHGB5,PCDHGA10,PCDHGA8,DIAPH1,PCDHGA2,PCDHGB3,PCDHGA6,PCDHGB6,PCDHGA7,PCDHGB7,PCDHGA4,PCDHGA3,PCDHGA9,PCDHGA1,PCDHGA11,PCDHGA5,PCDHGC4,
../firstrun/newGeneCopies/DIAPH1/DIAPH1_partitions/DIAPH1_group3.fasta	../firstrun/newGeneCopies/DIAPH1/DIAPH1_partitions/DIAPH1_group3_DIAPH1OOOAC008781v7OOOHDAC3.fasta	DIAPH1,AC008781.7,HDAC3,
../firstrun/newGeneCopies/DIAPH1/DIAPH1_partitions/DIAPH1_group2.fasta	../firstrun/newGeneCopies/DIAPH1/DIAPH1_partitions/DIAPH1_group2_DIAPH1OOODIAPH1-AS1.fasta	DIAPH1,DIAPH1-AS1,
../firstrun/newGeneCopies/ENTPD8/ENTPD8_partitions/ENTPD8_group1.fasta	../firstrun/newGeneCopies/ENTPD8/ENTPD8_partitions/ENTPD8_group1_ENTPD8OOONOXA1.fasta	NOXA1,ENTPD8,
../firstrun/newGeneCopies/CYP2F1/CYP2F1_partitions/CYP2F1_group1.fasta	../firstrun/newGeneCopies/CYP2F1/CYP2F1_partitions/CYP2F1_group1_CYP2F1OOOCTC-490E21v12OOOCYP2F2P.fasta	CYP2F2P,CTC-490E21.12,CYP2F1,
../firstrun/newGeneCopies/WDR1/WDR1_partitions/WDR1_group1.fasta	../firstrun/newGeneCopies/WDR1/WDR1_partitions/WDR1_group1_WDR1OOOMIR3138OOORNA5SP155.fasta	RNA5SP155,WDR1,RP11-448G15.3,MIR3138,
../firstrun/newGeneCopies/SEMA4C/SEMA4C_partitions/SEMA4C_group1.fasta	../firstrun/newGeneCopies/SEMA4C/SEMA4C_partitions/SEMA4C_group1_SEMA4COOOANKRD23OOOANKRD39.fasta	ANKRD39,ANKRD23,SEMA4C,
../firstrun/newGeneCopies/HENMT1/HENMT1_partitions/HENMT1_group1.fasta	../firstrun/newGeneCopies/HENMT1/HENMT1_partitions/HENMT1_group1_HENMT1OOORP11-256E16v3.fasta	HENMT1,RP11-256E16.3,
../firstrun/newGeneCopies/PRR14/PRR14_partitions/PRR14_group1.fasta	../firstrun/newGeneCopies/PRR14/PRR14_partitions/PRR14_group1_PRR14OOOFBRS.fasta	FBRS,PRR14,
../firstrun/newGeneCopies/HBQ1/HBQ1_partitions/HBQ1_group1.fasta	../firstrun/newGeneCopies/HBQ1/HBQ1_partitions/HBQ1_group1_HBQ1OOOHBA1OOOHBA2.fasta	HBA2,HBQ1,LA16c-OS12.2,Y_RNA,HBA1,
../firstrun/newGeneCopies/MGLL/MGLL_partitions/MGLL_group2.fasta	../firstrun/newGeneCopies/MGLL/MGLL_partitions/MGLL_group2_MGLL.fasta	MGLL,
../firstrun/newGeneCopies/MGLL/MGLL_partitions/MGLL_group3.fasta	../firstrun/newGeneCopies/MGLL/MGLL_partitions/MGLL_group3_MGLLOOOKBTBD12OOORNA5SP139.fasta	RP11-491D10.2,KBTBD12,SEC61A1,MGLL,RNA5SP139,
../firstrun/newGeneCopies/MGLL/MGLL_partitions/MGLL_group1.fasta	../firstrun/newGeneCopies/MGLL/MGLL_partitions/MGLL_group1_MGLL.fasta	MGLL,
../firstrun/newGeneCopies/CCDC74/CCDC74_partitions/CCDC74_group1.fasta	../firstrun/newGeneCopies/CCDC74/CCDC74_partitions/CCDC74_group1_CCDC74AOOOCCDC74BOOOMED15P4.fasta	MED15P9,CCDC74B,MED15P4,CCDC74A,
../firstrun/newGeneCopies/FFAR3/FFAR3_partitions/FFAR3_group1.fasta	../firstrun/newGeneCopies/FFAR3/FFAR3_partitions/FFAR3_group1_FFAR3OOOFFAR1OOOGPR42.fasta	GPR42,FFAR3,FFAR1,
../firstrun/newGeneCopies/MRM1/MRM1_partitions/MRM1_group1.fasta	../firstrun/newGeneCopies/MRM1/MRM1_partitions/MRM1_group1_MRM1OOODHRS11.fasta	MRM1,DHRS11,
../firstrun/newGeneCopies/SMIM20/SMIM20_partitions/SMIM20_group1.fasta	../firstrun/newGeneCopies/SMIM20/SMIM20_partitions/SMIM20_group1_SMIM20OOORP13-494C23v1OOOSEL1L3.fasta	RP13-494C23.1,SMIM20,SEL1L3,
../firstrun/newGeneCopies/SMIM20/SMIM20_partitions/SMIM20_group2.fasta	../firstrun/newGeneCopies/SMIM20/SMIM20_partitions/SMIM20_group2_SMIM20.fasta	SMIM20,
../firstrun/newGeneCopies/MOG/MOG_partitions/MOG_group1.fasta	../firstrun/newGeneCopies/MOG/MOG_partitions/MOG_group1_MOGSOOOCCDC142OOOINO80B-WBP1.fasta	RGPD1,WBP1,NDUFB4P5,NDUFB4P7,INO80B-WBP1,WBP1P1,RP11-523H20.7,MRPL53,MOGS,CCDC142,WBP1P2,
../firstrun/newGeneCopies/MOG/MOG_partitions/MOG_group6.fasta	../firstrun/newGeneCopies/MOG/MOG_partitions/MOG_group6_MOGOOOZFP57.fasta	ZFP57,MOG,
../firstrun/newGeneCopies/CDX2/CDX2_partitions/CDX2_group1.fasta	../firstrun/newGeneCopies/CDX2/CDX2_partitions/CDX2_group1_CDX2.fasta	CDX2,
../firstrun/newGeneCopies/RHOXF2/RHOXF2_partitions/RHOXF2_group1.fasta	../firstrun/newGeneCopies/RHOXF2/RHOXF2_partitions/RHOXF2_group1_RHOXF2OOORHOXF2BOOONKAPP1.fasta	RHOXF2B,RHOXF2,RHOXF1-AS1,NKAPP1,
../firstrun/newGeneCopies/KMT5/KMT5_partitions/KMT5_group1.fasta	../firstrun/newGeneCopies/KMT5/KMT5_partitions/KMT5_group1_KMT5AOOOKMT5AP1OOOKMT5AP2.fasta	RP11-341D18.5,KMT5AP2,IGSF3,KMT5A,AC027612.4,KMT5AP1,
../firstrun/newGeneCopies/KMT5/KMT5_partitions/KMT5_group4.fasta	../firstrun/newGeneCopies/KMT5/KMT5_partitions/KMT5_group4_KMT5B.fasta	KMT5B,
../firstrun/newGeneCopies/KCNF1/KCNF1_partitions/KCNF1_group1.fasta	../firstrun/newGeneCopies/KCNF1/KCNF1_partitions/KCNF1_group1_KCNF1.fasta	KCNF1,
../firstrun/newGeneCopies/DYRK4/DYRK4_partitions/DYRK4_group1.fasta	../firstrun/newGeneCopies/DYRK4/DYRK4_partitions/DYRK4_group1_DYRK4OOOAKAP3OOORAD51AP1.fasta	DYRK4,RP11-500M8.7,RAD51AP1,AKAP3,RP11-234B24.5,
../firstrun/newGeneCopies/SEC63/SEC63_partitions/SEC63_group1.fasta	../firstrun/newGeneCopies/SEC63/SEC63_partitions/SEC63_group1_SEC63OOOSEC63P1OOODPYD.fasta	SEC63,RP1-191J18.66,RNU6-437P,RPL23AP50,DPYD,SEC63P1,
../firstrun/newGeneCopies/HMX1/HMX1_partitions/HMX1_group1.fasta	../firstrun/newGeneCopies/HMX1/HMX1_partitions/HMX1_group1_HMX1OOORP13-582L3v4.fasta	HMX1,RP13-582L3.4,
../firstrun/newGeneCopies/AP003419/AP003419_partitions/AP003419_group1.fasta	../firstrun/newGeneCopies/AP003419/AP003419_partitions/AP003419_group1_AP003419v11OOOCLCF1OOOCTC-1337H24v3.fasta	POLD4,CTC-1337H24.4,RN7SKP239,CLCF1,CTC-1337H24.3,RAD9A,AP003419.11,
../firstrun/newGeneCopies/MT1M/MT1M_partitions/MT1M_group1.fasta	../firstrun/newGeneCopies/MT1M/MT1M_partitions/MT1M_group1_MT1MOOOMT1AOOOMT1E.fasta	RP11-249C24.10,MT1M,MT1JP,MT1A,MT1L,MT1E,
../firstrun/newGeneCopies/CYP2C9/CYP2C9_partitions/CYP2C9_group11.fasta	../firstrun/newGeneCopies/CYP2C9/CYP2C9_partitions/CYP2C9_group11_CYP2C9OOOCYP2C19OOORP11-400G3v5.fasta	CYP2C19,RP11-400G3.5,CYP2C9,
../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group52.fasta	../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group52_PCCAOOOPCCA-AS1OOORP11-364F8v1.fasta	RP11-364F8.1,PCCA,PCCA-AS1,
../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group45.fasta	../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group45_PCCAOOOPCCA-DTOOOASNSP3.fasta	PCCA-DT,ASNSP3,PCCA,
../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group50.fasta	../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group50_PCCA.fasta	PCCA,
../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group47.fasta	../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group47_PCCAOOORP11-340C20v3OOORPL15P18.fasta	PCCA,RP11-340C20.3,RPL15P18,
../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group51.fasta	../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group51_PCCA.fasta	PCCA,
../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group55.fasta	../firstrun/newGeneCopies/PCCA/PCCA_partitions/PCCA_group55_PCCAOOOGGACT.fasta	GGACT,PCCA,
../firstrun/newGeneCopies/SURF2/SURF2_partitions/SURF2_group1.fasta	../firstrun/newGeneCopies/SURF2/SURF2_partitions/SURF2_group1_SURF2OOOENSG00000283984OOORPL7A.fasta	SURF2,RPL7A,SURF1,ENSG00000283984,SURF4,
../firstrun/newGeneCopies/KISS1/KISS1_partitions/KISS1_group1.fasta	../firstrun/newGeneCopies/KISS1/KISS1_partitions/KISS1_group1_KISS1OOOGOLT1AOOOREN.fasta	KISS1,REN,RP11-203F10.1,GOLT1A,
../firstrun/newGeneCopies/KISS1/KISS1_partitions/KISS1_group2.fasta	../firstrun/newGeneCopies/KISS1/KISS1_partitions/KISS1_group2_KISS1ROOOARID3AOOOR3HDM4.fasta	ARID3A,KISS1R,R3HDM4,
../firstrun/newGeneCopies/ARSH/ARSH_partitions/ARSH_group3.fasta	../firstrun/newGeneCopies/ARSH/ARSH_partitions/ARSH_group3_ARSH.fasta	ARSH,
../firstrun/newGeneCopies/DTX2/DTX2_partitions/DTX2_group2.fasta	../firstrun/newGeneCopies/DTX2/DTX2_partitions/DTX2_group2_DTX2OOODTX2P1OOODTX2P1-UPK3BP1-PMS2P11.fasta	Y_RNA,AC004951.6,DTX2P1-UPK3BP1-PMS2P11,STAG3L4,POLR2J3,RP11-514P8.10,PMS2CL,SPDYE17,PMS2,STAG3L5P-PVRIG2P-PILRB,SPDYE1,AC005522.7,PMS2P12,PMS2P2,PMS2P1,SPDYE11,RP5-1022I14.2,SPDYE21,SPDYE13P,SPDYE9,UPK3BP1,SPDYE2,FDPSP7,AC114737.2,SPDYE10P,SPDYE15P,PMS2P3,DTX2,AC004980.9,RP11-514P8.7,AC007078.4,RP11-467H10.2,SPDYE7P,CH17-264B6.3,PMS2P10,DTX2P1,SPDYE6,SPDYE8,PMS2P5,AC114737.3,SPDYE14P,AIMP2,AC073343.13,STAG3L1,CH17-264B6.1,UPK3B,SPDYE13,PMS2P9,PMS2P6,STAG3L5P,SPDYE15,SPDYE5,RP11-577H5.5,CH17-264B6.6,PMS2P8,PMS2P11,PMS2P7,PMS2P4,SPDYE16,SPDYE20P,AC004980.8,POLR2J2,SPDYE18,FDPSP2,SPDYE3,SPDYE14,SPDYE12P,SPDYE2B,POLR2J4,RP5-1165K10.2,
../firstrun/newGeneCopies/GPR12/GPR12_partitions/GPR12_group1.fasta	../firstrun/newGeneCopies/GPR12/GPR12_partitions/GPR12_group1_GPR12.fasta	GPR12,
../firstrun/newGeneCopies/LILRB/LILRB_partitions/LILRB_group1.fasta	../firstrun/newGeneCopies/LILRB/LILRB_partitions/LILRB_group1_LILRB1OOOLILRB1-AS1OOOLILRB2.fasta	AC011515.2,LILRP1,RNU6-1307P,LILRB3,AC010518.3,XXbac-BPG111L9.11,AC098784.1,U6,XXbac-BPG554J19.2,XXbac-BPG541D20.6,LILRB1-AS1,AC010492.5,CTB-83J4.1,MIR8061,LILRB1,AC010518.2,AC009892.9,CTB-83J4.2,LILRB5,LILRP2,LILRB2,LILRA3,VN1R105P,RPS9,XXbac-BCX360G3.2,XXbac-BPG637J10.3,LILRA6,LILRA1,XXbac-BCX105G6.11,LILRB4,AC010492.4,LAIR1,MIR4752,LILRA2,
../firstrun/newGeneCopies/ZCCHC17/ZCCHC17_partitions/ZCCHC17_group1.fasta	../firstrun/newGeneCopies/ZCCHC17/ZCCHC17_partitions/ZCCHC17_group1_ZCCHC17OOOFABP3OOORP11-266K22v2.fasta	SNRNP40,RP11-266K22.2,FABP3,ZCCHC17,
../firstrun/newGeneCopies/UNKL/UNKL_partitions/UNKL_group1.fasta	../firstrun/newGeneCopies/UNKL/UNKL_partitions/UNKL_group1_UNKLOOOGNPTGOOOLA16c-312E8v2.fasta	GNPTG,UNKL,LA16c-316G12.2,LA16c-312E8.2,
../firstrun/newGeneCopies/ARFRP1/ARFRP1_partitions/ARFRP1_group1.fasta	../firstrun/newGeneCopies/ARFRP1/ARFRP1_partitions/ARFRP1_group1_ARFRP1OOORP4-583P15v15OOORTEL1.fasta	ARFRP1,TNFRSF6B,RTEL1-TNFRSF6B,RTEL1,ZGPAT,RP4-583P15.15,
../firstrun/newGeneCopies/ANO7/ANO7_partitions/ANO7_group2.fasta	../firstrun/newGeneCopies/ANO7/ANO7_partitions/ANO7_group2_ANO7OOOHDLBP.fasta	ANO7,HDLBP,
../firstrun/newGeneCopies/HCK/HCK_partitions/HCK_group1.fasta	../firstrun/newGeneCopies/HCK/HCK_partitions/HCK_group1_HCKOOORNA5SP482.fasta	HCK,RNA5SP482,
../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group7.fasta	../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group7_PDE10A.fasta	PDE10A,
../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group6.fasta	../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group6_PDE10A.fasta	PDE10A,
../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group9.fasta	../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group9_PDE10A.fasta	PDE10A,
../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group10.fasta	../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group10_PDE10AOOOLINC00602.fasta	PDE10A,LINC00602,
../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group4.fasta	../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group4_PDE10A.fasta	PDE10A,
../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group8.fasta	../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group8_PDE10AOOORNU6-730P.fasta	PDE10A,RNU6-730P,
../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group3.fasta	../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group3_PDE10A.fasta	PDE10A,
../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group2.fasta	../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group2_PDE10AOOORNA5SP226.fasta	PDE10A,RNA5SP226,
../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group1.fasta	../firstrun/newGeneCopies/PDE10A/PDE10A_partitions/PDE10A_group1_PDE10A.fasta	PDE10A,
../firstrun/newGeneCopies/ZNF596/ZNF596_partitions/ZNF596_group1.fasta	../firstrun/newGeneCopies/ZNF596/ZNF596_partitions/ZNF596_group1_ZNF596OOOFAM87BOOOLINC00115.fasta	RP11-63E5.1,LINC00115,ZNF596,RP5-855D21.2,RPL23AP53,RP11-206L10.17,RP1-191N21.5,XX-C2158C12.2,RP5-855D21.3,FAM87B,RP5-855D21.1,LINC01128,
../firstrun/newGeneCopies/PSMG3/PSMG3_partitions/PSMG3_group1.fasta	../firstrun/newGeneCopies/PSMG3/PSMG3_partitions/PSMG3_group1_PSMG3OOOPSMG3-AS1.fasta	PSMG3,PSMG3-AS1,
../firstrun/newGeneCopies/EXTL2/EXTL2_partitions/EXTL2_group1.fasta	../firstrun/newGeneCopies/EXTL2/EXTL2_partitions/EXTL2_group1_EXTL2OOORP4-549L20v3OOOSLC30A7.fasta	SLC30A7,RP4-549L20.3,EXTL2,
../firstrun/newGeneCopies/USP41/USP41_partitions/USP41_group1.fasta	../firstrun/newGeneCopies/USP41/USP41_partitions/USP41_group1_USP41OOOAC008103v4OOOAC011718v3.fasta	XXbac-B562F10.14,ENSG00000283864,FAM230A,AC011718.3,FAM230G,KB-1183D5.14,FAM230D,FAM230I,FAM230E,FAM230F,USP18,AC008103.4,USP41,FAM230B,FAM230J,XXbac-B33L19.6,KB-1592A4.14,FAM230C,FAM230H,
../firstrun/newGeneCopies/RILP/RILP_partitions/RILP_group18.fasta	../firstrun/newGeneCopies/RILP/RILP_partitions/RILP_group18_RILPL2OOOCOPS5P2.fasta	COPS5P2,RILPL2,
../firstrun/newGeneCopies/LIMS/LIMS_partitions/LIMS_group1.fasta	../firstrun/newGeneCopies/LIMS/LIMS_partitions/LIMS_group1_LIMS1OOOGCC2-AS1.fasta	LIMS1,GCC2-AS1,
../firstrun/newGeneCopies/LIMS/LIMS_partitions/LIMS_group4.fasta	../firstrun/newGeneCopies/LIMS/LIMS_partitions/LIMS_group4_LIMS1OOOLIMS1-AS1OOOLIMS3.fasta	RP13-1039J1.3,LIMS1-AS1,LIMS1,AC108938.5,AC010095.6,LIMS4,RGPD6,LIMS3,AC013271.7,RGPD5,
../firstrun/newGeneCopies/DFFA/DFFA_partitions/DFFA_group1.fasta	../firstrun/newGeneCopies/DFFA/DFFA_partitions/DFFA_group1_DFFAOOOCENPS-CORTOOOCORT.fasta	CORT,RP5-1113E3.3,DFFA,PEX14,CENPS-CORT,
../firstrun/newGeneCopies/PPP3R1/PPP3R1_partitions/PPP3R1_group1.fasta	../firstrun/newGeneCopies/PPP3R1/PPP3R1_partitions/PPP3R1_group1_PPP3R1OOOPNO1OOORP11-474G23v1.fasta	PNO1,RP11-474G23.3,PPP3R1,RP11-474G23.1,RP11-474G23.2,
../firstrun/newGeneCopies/SMIM5/SMIM5_partitions/SMIM5_group1.fasta	../firstrun/newGeneCopies/SMIM5/SMIM5_partitions/SMIM5_group1_SMIM5OOORECQL5.fasta	RECQL5,SMIM5,
../firstrun/newGeneCopies/TJP2/TJP2_partitions/TJP2_group1.fasta	../firstrun/newGeneCopies/TJP2/TJP2_partitions/TJP2_group1_TJP2OOORP11-16N10v2.fasta	RP11-16N10.2,TJP2,
../firstrun/newGeneCopies/ATXN/ATXN_partitions/ATXN_group24.fasta	../firstrun/newGeneCopies/ATXN/ATXN_partitions/ATXN_group24_ATXN2LOOORP11-1348G14v1OOORP11-1348G14v4.fasta	RP11-1348G14.4,RP11-1348G14.8,RP11-231C14.10,ATXN2L,RP11-24N18.1,RP11-1348G14.1,RP11-1348G14.5,
../firstrun/newGeneCopies/ATXN/ATXN_partitions/ATXN_group1.fasta	../firstrun/newGeneCopies/ATXN/ATXN_partitions/ATXN_group1_ATXN7L2OOOCYB561D1OOOSYPL2.fasta	ATXN7L2,CYB561D1,SYPL2,
../firstrun/newGeneCopies/ATXN/ATXN_partitions/ATXN_group19.fasta	../firstrun/newGeneCopies/ATXN/ATXN_partitions/ATXN_group19_ATXN2OOOATXN2-ASOOOIFITM3P5.fasta	ATXN2,ATXN2-AS,IFITM3P5,
../firstrun/newGeneCopies/ATXN/ATXN_partitions/ATXN_group17.fasta	../firstrun/newGeneCopies/ATXN/ATXN_partitions/ATXN_group17_ATXN2OOOSH2B3.fasta	ATXN2,SH2B3,
../firstrun/newGeneCopies/CNNM4/CNNM4_partitions/CNNM4_group1.fasta	../firstrun/newGeneCopies/CNNM4/CNNM4_partitions/CNNM4_group1_CNNM4OOOCNNM3-DTOOOMIR3127.fasta	CNNM3-DT,CNNM4,MIR3127,
../firstrun/newGeneCopies/GABRD/GABRD_partitions/GABRD_group1.fasta	../firstrun/newGeneCopies/GABRD/GABRD_partitions/GABRD_group1_GABRD.fasta	GABRD,
../firstrun/newGeneCopies/DNAJC15/DNAJC15_partitions/DNAJC15_group2.fasta	../firstrun/newGeneCopies/DNAJC15/DNAJC15_partitions/DNAJC15_group2_DNAJC15.fasta	DNAJC15,
../firstrun/newGeneCopies/DNAJC15/DNAJC15_partitions/DNAJC15_group1.fasta	../firstrun/newGeneCopies/DNAJC15/DNAJC15_partitions/DNAJC15_group1_DNAJC15.fasta	DNAJC15,
../firstrun/newGeneCopies/TRIM11/TRIM11_partitions/TRIM11_group1.fasta	../firstrun/newGeneCopies/TRIM11/TRIM11_partitions/TRIM11_group1_TRIM11OOOMIR6742OOORP11-245P10v4.fasta	TRIM11,TRIM17,RP11-245P10.4,MIR6742,RP11-245P10.8,
../firstrun/newGeneCopies/ENDOV/ENDOV_partitions/ENDOV_group1.fasta	../firstrun/newGeneCopies/ENDOV/ENDOV_partitions/ENDOV_group1_ENDOVOOOMIR4730OOORNF213-AS1.fasta	MIR4730,ENDOV,RNF213-AS1,
../firstrun/newGeneCopies/LPCAT2/LPCAT2_partitions/LPCAT2_group2.fasta	../firstrun/newGeneCopies/LPCAT2/LPCAT2_partitions/LPCAT2_group2_LPCAT2OOOCAPNS2OOOMMP2.fasta	RP11-212I21.4,MMP2,CAPNS2,LPCAT2,
../firstrun/newGeneCopies/RNF212/RNF212_partitions/RNF212_group3.fasta	../firstrun/newGeneCopies/RNF212/RNF212_partitions/RNF212_group3_RNF212OOOENSG10010135307v1OOORP11-20I20v1.fasta	RP11-20I20.1,RNF212,RP11-20I20.2,ENSG10010135307.1,TMED11P,
../firstrun/newGeneCopies/ELAC1/ELAC1_partitions/ELAC1_group1.fasta	../firstrun/newGeneCopies/ELAC1/ELAC1_partitions/ELAC1_group1_ELAC1OOORP11-729L2v2.fasta	RP11-729L2.2,ELAC1,
../firstrun/newGeneCopies/NGF/NGF_partitions/NGF_group1.fasta	../firstrun/newGeneCopies/NGF/NGF_partitions/NGF_group1_NGFOOONGF-AS1OOORP4-662B22v2.fasta	NGF,NGF-AS1,RP4-662B22.2,
../firstrun/newGeneCopies/SINHCAF/SINHCAF_partitions/SINHCAF_group4.fasta	../firstrun/newGeneCopies/SINHCAF/SINHCAF_partitions/SINHCAF_group4_SINHCAFOOOSINHCAFP2OOOENTR1P1.fasta	RP11-866E20.3,RP11-627K11.3,RP11-627K11.6,ENTR1P1,FLJ13224,SINHCAF,RNU6-567P,SINHCAFP2,
../firstrun/newGeneCopies/TEDC1/TEDC1_partitions/TEDC1_group1.fasta	../firstrun/newGeneCopies/TEDC1/TEDC1_partitions/TEDC1_group1_TEDC1OOOAL928654v7OOOCRIP1.fasta	TEDC1,CRIP1,AL928654.7,
../firstrun/newGeneCopies/C3/C3_partitions/C3_group1.fasta	../firstrun/newGeneCopies/C3/C3_partitions/C3_group1_C3OOOCTD-3128G10v7OOOGPR108.fasta	GPR108,CTD-3128G10.7,C3,
../firstrun/newGeneCopies/IPO8/IPO8_partitions/IPO8_group3.fasta	../firstrun/newGeneCopies/IPO8/IPO8_partitions/IPO8_group3_IPO8OOORP11-77I22v5.fasta	IPO8,RP11-77I22.5,
../firstrun/newGeneCopies/ILF2/ILF2_partitions/ILF2_group1.fasta	../firstrun/newGeneCopies/ILF2/ILF2_partitions/ILF2_group1_ILF2OOOSNAPIN.fasta	ILF2,SNAPIN,
../firstrun/newGeneCopies/DMPK/DMPK_partitions/DMPK_group1.fasta	../firstrun/newGeneCopies/DMPK/DMPK_partitions/DMPK_group1_DMPKOOOAC011530v4OOOAC074212v5.fasta	AC074212.5,DMPK,SIX5,DM1-AS,DMWD,AC011530.4,
../firstrun/newGeneCopies/SNX15/SNX15_partitions/SNX15_group1.fasta	../firstrun/newGeneCopies/SNX15/SNX15_partitions/SNX15_group1_ARL2-SNX15OOOSNX15OOOAP000436v4.fasta	ARL2-SNX15,SAC3D1,AP000436.4,SNX15,
../firstrun/newGeneCopies/PPP1R36/PPP1R36_partitions/PPP1R36_group1.fasta	../firstrun/newGeneCopies/PPP1R36/PPP1R36_partitions/PPP1R36_group1_PPP1R36OOOHSPA2OOORP11-973N13v3.fasta	RP11-973N13.3,PPP1R36,HSPA2,
../firstrun/newGeneCopies/TUFM/TUFM_partitions/TUFM_group1.fasta	../firstrun/newGeneCopies/TUFM/TUFM_partitions/TUFM_group1_TUFMOOOATXN2LOOOMIR4721.fasta	ATXN2L,SH2B1,RP11-24N18.1,TUFM,MIR4721,RP11-231C14.10,
../firstrun/newGeneCopies/ZMYM3/ZMYM3_partitions/ZMYM3_group1.fasta	../firstrun/newGeneCopies/ZMYM3/ZMYM3_partitions/ZMYM3_group1_ZMYM3OOONONO.fasta	ZMYM3,NONO,
../firstrun/newGeneCopies/ZNF716/ZNF716_partitions/ZNF716_group2.fasta	../firstrun/newGeneCopies/ZNF716/ZNF716_partitions/ZNF716_group2_ZNF716OOOZNF679.fasta	ZNF679,ZNF716,
../firstrun/newGeneCopies/CLCNKA/CLCNKA_partitions/CLCNKA_group1.fasta	../firstrun/newGeneCopies/CLCNKA/CLCNKA_partitions/CLCNKA_group1_CLCNKAOOOCLCNKBOOOFAM131C.fasta	FAM131C,CLCNKB,CLCNKA,RP11-5P18.10,HSPB7,
../firstrun/newGeneCopies/FUT1/FUT1_partitions/FUT1_group1.fasta	../firstrun/newGeneCopies/FUT1/FUT1_partitions/FUT1_group1_FUT1OOOFGF21OOOIZUMO1.fasta	FGF21,FUT1,IZUMO1,
../firstrun/newGeneCopies/RP11-894J14.5/RP11-894J14.5_partitions/RP11-894J14.5_group4.fasta	../firstrun/newGeneCopies/RP11-894J14.5/RP11-894J14.5_partitions/RP11-894J14.5_group4_RP11-894J14v5OOORFT1OOOSERBP1P3.fasta	RFT1,RP11-894J14.5,SERBP1P3,
../firstrun/newGeneCopies/RP11-894J14.5/RP11-894J14.5_partitions/RP11-894J14.5_group1.fasta	../firstrun/newGeneCopies/RP11-894J14.5/RP11-894J14.5_partitions/RP11-894J14.5_group1_RP11-894J14v5OOORP11-5O17v1OOOSFMBT1.fasta	RP11-894J14.5,SFMBT1,RP11-5O17.1,
../firstrun/newGeneCopies/CTLA4/CTLA4_partitions/CTLA4_group1.fasta	../firstrun/newGeneCopies/CTLA4/CTLA4_partitions/CTLA4_group1_CTLA4.fasta	CTLA4,
../firstrun/newGeneCopies/TRPS1/TRPS1_partitions/TRPS1_group4.fasta	../firstrun/newGeneCopies/TRPS1/TRPS1_partitions/TRPS1_group4_TRPS1.fasta	TRPS1,
../firstrun/newGeneCopies/TRPS1/TRPS1_partitions/TRPS1_group1.fasta	../firstrun/newGeneCopies/TRPS1/TRPS1_partitions/TRPS1_group1_TRPS1.fasta	TRPS1,
../firstrun/newGeneCopies/TRPS1/TRPS1_partitions/TRPS1_group3.fasta	../firstrun/newGeneCopies/TRPS1/TRPS1_partitions/TRPS1_group3_TRPS1.fasta	TRPS1,
../firstrun/newGeneCopies/GDAP/GDAP_partitions/GDAP_group6.fasta	../firstrun/newGeneCopies/GDAP/GDAP_partitions/GDAP_group6_GDAP1L1.fasta	GDAP1L1,
../firstrun/newGeneCopies/RP11-474G23.1/RP11-474G23.1_partitions/RP11-474G23.1_group1.fasta	../firstrun/newGeneCopies/RP11-474G23.1/RP11-474G23.1_partitions/RP11-474G23.1_group1_RP11-474G23v1OOOPNO1OOOPPP3R1.fasta	RP11-474G23.1,RP11-474G23.3,WDR92,PNO1,PPP3R1,
../firstrun/newGeneCopies/PRMT7/PRMT7_partitions/PRMT7_group1.fasta	../firstrun/newGeneCopies/PRMT7/PRMT7_partitions/PRMT7_group1_PRMT7OOORNU4-30POOORP11-96D1v3.fasta	RP11-96D1.3,RNU4-30P,PRMT7,SMPD3,SLC7A6OS,
../firstrun/newGeneCopies/EFEMP2/EFEMP2_partitions/EFEMP2_group1.fasta	../firstrun/newGeneCopies/EFEMP2/EFEMP2_partitions/EFEMP2_group1_EFEMP2OOOMUS81.fasta	MUS81,EFEMP2,
../firstrun/newGeneCopies/BAHD1/BAHD1_partitions/BAHD1_group1.fasta	../firstrun/newGeneCopies/BAHD1/BAHD1_partitions/BAHD1_group1_BAHD1OOOCHST14OOORP11-64K12v8.fasta	RP11-64K12.9,CHST14,RP11-64K12.8,BAHD1,
../firstrun/newGeneCopies/NBPF/NBPF_partitions/NBPF_group00154024.fasta	../firstrun/newGeneCopies/NBPF/NBPF_partitions/NBPF_group00154024_NBPF13P.fasta	NBPF13P,
../firstrun/newGeneCopies/NBPF/NBPF_partitions/NBPF_group0015401.fasta	../firstrun/newGeneCopies/NBPF/NBPF_partitions/NBPF_group0015401_NBPF1OOONBPF10OOONBPF11.fasta	HS6ST1P1,GPR89A,NBPF3,NBPF7,NOTCH2NLR,NBPF12,HS6ST1,RP11-763B22.3,RP11-89F3.2,CH17-159N18.5,NBPF8,NBPF2P,CH17-78J1.1,PFN1P12,NBPF17P,NOTCH2,NBPF14,PFN1P3,PFN1P4,NBPF26,GPR89B,RP11-666A1.4,RP11-640M9.4,AC239799.1,NOTCH2NLC,NOTCH2NLA,ABHD17AP1,HYDIN2,NBPF9,ENSG00000271254,RP4-791M13.3,NBPF19,PFN1P9,NBPF25P,CROCCP5,NBPF10,NBPF11,NOTCH2NLB,PFN1P10,NBPF15,NBPF1,PFN1P2,PFN1P6,NBPF20,PFN1P8,RP11-763B22.4,LINC01719,
../firstrun/newGeneCopies/NBPF/NBPF_partitions/NBPF_group51.fasta	../firstrun/newGeneCopies/NBPF/NBPF_partitions/NBPF_group51_NBPF21P.fasta	NBPF21P,
../firstrun/newGeneCopies/NBPF/NBPF_partitions/NBPF_group42.fasta	../firstrun/newGeneCopies/NBPF/NBPF_partitions/NBPF_group42_NBPF18POOOAL591893v1.fasta	NBPF18P,AL591893.1,
../firstrun/newGeneCopies/NBPF/NBPF_partitions/NBPF_group8.fasta	../firstrun/newGeneCopies/NBPF/NBPF_partitions/NBPF_group8_NBPF22POOONBPF4OOONBPF5P.fasta	NBPF4,SLC25A24P2,SLC25A24P1,NBPF5P,NBPF22P,NBPF6,
../firstrun/newGeneCopies/C17orf/C17orf_partitions/C17orf_group24.fasta	../firstrun/newGeneCopies/C17orf/C17orf_partitions/C17orf_group24_C17orf99OOOEIF5AP2OOOSYNGR2.fasta	C17orf99,SYNGR2,EIF5AP2,
../firstrun/newGeneCopies/C17orf/C17orf_partitions/C17orf_group1.fasta	../firstrun/newGeneCopies/C17orf/C17orf_partitions/C17orf_group1_C17orf97OOOAC108004v3.fasta	AC108004.3,C17orf97,
../firstrun/newGeneCopies/C17orf/C17orf_partitions/C17orf_group18.fasta	../firstrun/newGeneCopies/C17orf/C17orf_partitions/C17orf_group18_C17orf64OOORPL12P38OOOUSP32.fasta	USP32,C17orf64,RPL12P38,
../firstrun/newGeneCopies/TNFRSF14/TNFRSF14_partitions/TNFRSF14_group1.fasta	../firstrun/newGeneCopies/TNFRSF14/TNFRSF14_partitions/TNFRSF14_group1_TNFRSF14OOOTNFRSF14-AS1OOORP3-395M20v12.fasta	RP3-395M20.7,RP3-395M20.12,TNFRSF14-AS1,TNFRSF14,
../firstrun/newGeneCopies/PRPF38B/PRPF38B_partitions/PRPF38B_group1.fasta	../firstrun/newGeneCopies/PRPF38B/PRPF38B_partitions/PRPF38B_group1_PRPF38B.fasta	PRPF38B,
../firstrun/newGeneCopies/ZNF48/ZNF48_partitions/ZNF48_group1.fasta	../firstrun/newGeneCopies/ZNF48/ZNF48_partitions/ZNF48_group1_ZNF48OOOMYLPFOOORP11-297C4v6.fasta	RP11-297C4.6,SEPTIN1,MYLPF,ZNF48,
../firstrun/newGeneCopies/SIGIRR/SIGIRR_partitions/SIGIRR_group1.fasta	../firstrun/newGeneCopies/SIGIRR/SIGIRR_partitions/SIGIRR_group1_SIGIRROOOANO9OOOPKP3.fasta	PKP3,ANO9,SIGIRR,
../firstrun/newGeneCopies/LEAP2/LEAP2_partitions/LEAP2_group1.fasta	../firstrun/newGeneCopies/LEAP2/LEAP2_partitions/LEAP2_group1_LEAP2OOOAFF4OOOGDF9.fasta	AFF4,UQCRQ,GDF9,LEAP2,
../firstrun/newGeneCopies/GP6/GP6_partitions/GP6_group13.fasta	../firstrun/newGeneCopies/GP6/GP6_partitions/GP6_group13_GP6OOOGP6-AS1OOOCTC-550B14v6.fasta	CTC-550B14.6,GP6,RDH13,GP6-AS1,
../firstrun/newGeneCopies/DIXDC1/DIXDC1_partitions/DIXDC1_group1.fasta	../firstrun/newGeneCopies/DIXDC1/DIXDC1_partitions/DIXDC1_group1_DIXDC1OOOAP002884v2OOOBCO2.fasta	BCO2,KCTD9P4,HSPB2-C11orf52,DIXDC1,C11orf52,AP002884.2,RNA5SP351,RP11-708L7.7,
../firstrun/newGeneCopies/DIXDC1/DIXDC1_partitions/DIXDC1_group2.fasta	../firstrun/newGeneCopies/DIXDC1/DIXDC1_partitions/DIXDC1_group2_DIXDC1.fasta	DIXDC1,
../firstrun/newGeneCopies/DIXDC1/DIXDC1_partitions/DIXDC1_group3.fasta	../firstrun/newGeneCopies/DIXDC1/DIXDC1_partitions/DIXDC1_group3_DIXDC1OOODLATOOORP11-708L7v6.fasta	DLAT,RP11-708L7.6,DIXDC1,
../firstrun/newGeneCopies/NAA25/NAA25_partitions/NAA25_group1.fasta	../firstrun/newGeneCopies/NAA25/NAA25_partitions/NAA25_group1_NAA25OOOMIR3657OOORP1-267L14v3.fasta	MIR3657,NAA25,RP1-267L14.3,Y_RNA,
../firstrun/newGeneCopies/COX6B1/COX6B1_partitions/COX6B1_group7.fasta	../firstrun/newGeneCopies/COX6B1/COX6B1_partitions/COX6B1_group7_COX6B1.fasta	COX6B1,
../firstrun/newGeneCopies/KLHL41/KLHL41_partitions/KLHL41_group1.fasta	../firstrun/newGeneCopies/KLHL41/KLHL41_partitions/KLHL41_group1_KLHL41OOOFASTKD1OOORP11-724O16v1.fasta	RP11-724O16.1,KLHL41,FASTKD1,
../firstrun/newGeneCopies/AGAP9/AGAP9_partitions/AGAP9_group1.fasta	../firstrun/newGeneCopies/AGAP9/AGAP9_partitions/AGAP9_group1_AGAP9OOOAGAP10POOOAGAP11.fasta	AGAP9,AGAP12P,AGAP7P,RP11-144G6.4,BMS1P4,RP11-96C23.14,RP11-144G6.12,BMS1P3,AGAP10P,RP11-96C23.10,BMS1P4-AGAP5,TIMM23B-AGAP6,AGAP14P,AGAP4,RP11-96C23.5,AGAP5,AGAP13P,AGAP11,SYNPO2L-AS1,RP11-96C23.13,FAM21FP,RP11-324H6.8,AGAP6,
../firstrun/newGeneCopies/STKLD1/STKLD1_partitions/STKLD1_group1.fasta	../firstrun/newGeneCopies/STKLD1/STKLD1_partitions/STKLD1_group1_STKLD1OOOREXO4OOOSURF4.fasta	STKLD1,REXO4,SURF4,
../firstrun/newGeneCopies/CA14/CA14_partitions/CA14_group1.fasta	../firstrun/newGeneCopies/CA14/CA14_partitions/CA14_group1_CA14OOOAPH1AOOOC1orf54.fasta	CA14,RP4-790G17.7,C1orf54,APH1A,
../firstrun/newGeneCopies/EWSR1/EWSR1_partitions/EWSR1_group3.fasta	../firstrun/newGeneCopies/EWSR1/EWSR1_partitions/EWSR1_group3_EWSR1OOORHBDD3.fasta	RHBDD3,EWSR1,
../firstrun/newGeneCopies/CCDC183/CCDC183_partitions/CCDC183_group1.fasta	../firstrun/newGeneCopies/CCDC183/CCDC183_partitions/CCDC183_group1_CCDC183OOOCCDC183-AS1OOORABL6.fasta	RABL6,RP11-216L13.18,RP11-216L13.19,CCDC183-AS1,TMEM141,RP11-216L13.17,CCDC183,
../firstrun/newGeneCopies/DHRS4/DHRS4_partitions/DHRS4_group16.fasta	../firstrun/newGeneCopies/DHRS4/DHRS4_partitions/DHRS4_group16_DHRS4OOODHRS4-AS1OOODHRS4L1.fasta	DHRS4L2,RP11-76P17.4,DHRS4,CARMIL3,DHRS4-AS1,RP11-468E2.12,DHRS4L1,ENSG00000286673,
../firstrun/newGeneCopies/ZNF260/ZNF260_partitions/ZNF260_group1.fasta	../firstrun/newGeneCopies/ZNF260/ZNF260_partitions/ZNF260_group1_ZNF260OOOAC092295v4.fasta	ZNF260,AC092295.4,
../firstrun/newGeneCopies/ULK2/ULK2_partitions/ULK2_group1.fasta	../firstrun/newGeneCopies/ULK2/ULK2_partitions/ULK2_group1_ULK2OOONDUFB4P3OOORP11-78O7v1.fasta	ULK2,RP11-78O7.3,RP11-78O7.1,NDUFB4P3,
../firstrun/newGeneCopies/BTNL9/BTNL9_partitions/BTNL9_group1.fasta	../firstrun/newGeneCopies/BTNL9/BTNL9_partitions/BTNL9_group1_BTNL9OOOMIR8089.fasta	MIR8089,BTNL9,
../firstrun/newGeneCopies/MUC5B/MUC5B_partitions/MUC5B_group2.fasta	../firstrun/newGeneCopies/MUC5B/MUC5B_partitions/MUC5B_group2_MUC5BOOOMUC5B-AS1OOOMIR6744.fasta	MUC5B,MIR6744,RP11-532E4.3,MUC5B-AS1,
../firstrun/newGeneCopies/TBC1D26/TBC1D26_partitions/TBC1D26_group2.fasta	../firstrun/newGeneCopies/TBC1D26/TBC1D26_partitions/TBC1D26_group2_TBC1D26OOOTBC1D26-AS1OOOAC005324v8.fasta	TBC1D26,RP11-815I9.3,AC005324.8,RP11-640I15.2,TBC1D26-AS1,RP11-815I9.7,NEK4P2,TBC1D28,
../firstrun/newGeneCopies/NSMF/NSMF_partitions/NSMF_group1.fasta	../firstrun/newGeneCopies/NSMF/NSMF_partitions/NSMF_group1_NSMFOOOMIR7114OOOPNPLA7.fasta	PNPLA7,NSMF,MIR7114,
../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group3.fasta	../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group3_ANTXR1OOOMIR3126.fasta	MIR3126,ANTXR1,
../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group2.fasta	../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group2_ANTXR1.fasta	ANTXR1,
../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group1.fasta	../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group1_ANTXR1.fasta	ANTXR1,
../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group6.fasta	../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group6_ANTXR1OOORP11-85D18v1.fasta	ANTXR1,RP11-85D18.1,
../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group13.fasta	../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group13_ANTXRLOOOANTXRLP1.fasta	ANTXRL,ANTXRLP1,
../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group5.fasta	../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group5_ANTXR1OOORNA5SP96OOORNU6-1216P.fasta	RNU6-1216P,ANTXR1,RNA5SP96,
../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group4.fasta	../firstrun/newGeneCopies/ANTXR/ANTXR_partitions/ANTXR_group4_ANTXR1.fasta	ANTXR1,
../firstrun/newGeneCopies/CORT/CORT_partitions/CORT_group1.fasta	../firstrun/newGeneCopies/CORT/CORT_partitions/CORT_group1_CENPS-CORTOOOCORTOOODFFA.fasta	CORT,DFFA,CENPS-CORT,
../firstrun/newGeneCopies/MAMDC4/MAMDC4_partitions/MAMDC4_group1.fasta	../firstrun/newGeneCopies/MAMDC4/MAMDC4_partitions/MAMDC4_group1_MAMDC4OOOAJM1OOOEDF1.fasta	PHPT1,MAMDC4,AJM1,EDF1,
../firstrun/newGeneCopies/RNF223/RNF223_partitions/RNF223_group1.fasta	../firstrun/newGeneCopies/RNF223/RNF223_partitions/RNF223_group1_RNF223OOORP11-465B22v3.fasta	RP11-465B22.3,RNF223,
../firstrun/newGeneCopies/ABHD16A/ABHD16A_partitions/ABHD16A_group1.fasta	../firstrun/newGeneCopies/ABHD16A/ABHD16A_partitions/ABHD16A_group1_ABHD16AOOOLY6G5COOOMIR4646.fasta	LY6G5C,XXbac-BPG32J3.20,MIR4646,ABHD16A,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group48.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group48_OR5I1.fasta	OR5I1,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group65.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group65_OR5AR1OOOOR2AH1P.fasta	OR2AH1P,OR5AR1,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group44.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group44_OR5D14OOOOR5D15POOOOR5D16.fasta	OR5D18,OR5L2,OR5D14,OR5D15P,OR5D16,OR5L1,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group64.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group64_OR5AM1POOOOR5AP1POOOOR5AP2.fasta	OR5M10,OR5AM1P,OR5AP1P,OR5M13P,OR5M1,OR5M12P,OR5AP2,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group50.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group50_OR5AQ1POOOOR5AS1OOOOR5F1.fasta	OR5F2P,OR5AS1,OR5F1,OR5AQ1P,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group47.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group47_OR5W1POOOOR5W2.fasta	OR5W2,OR5W1P,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group40.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group40_OR5D2POOOOR5D3P.fasta	OR5D2P,OR5D3P,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group57.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group57_OR5T2.fasta	OR5T2,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group58.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group58_OR5T3.fasta	OR5T3,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group63.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group63_OR5M11OOOOR5M5P.fasta	OR5M11,OR5M5P,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group55.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group55_OR5J2OOOOR5J7POOOOR8K5.fasta	OR5J7P,OR5J2,OR8K5,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group59.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group59_OR5T1.fasta	OR5T1,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group43.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group43_OR5D13.fasta	OR5D13,
../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group62.fasta	../firstrun/newGeneCopies/OR5/OR5_partitions/OR5_group62_OR5M2POOOOR5M3OOOOR5M4P.fasta	OR5M3,OR5M9,OR5M6P,CTD-3051L14.15,CTD-3051L14.14,CTD-3051L14.13,OR5M7P,OR5M2P,OR5M8,OR5M4P,
../firstrun/newGeneCopies/TRIM49/TRIM49_partitions/TRIM49_group4.fasta	../firstrun/newGeneCopies/TRIM49/TRIM49_partitions/TRIM49_group4_TRIM49OOOTRIM49BOOOTRIM49C.fasta	TRIM51GP,RP11-163O19.10,RP11-707M1.7,TRIM51DP,TRIM49D1,RP11-163O19.1,TRIM49D2,TRIM53CP,RP11-163O19.16,AP006587.1,RP11-738O11.9,RP11-738O11.13,RP11-72M10.2,TRIM53BP,TRIM48,TRIM51FP,TRIM53AP,TRIM49B,TRIM51,TRIM51HP,TRIM49,RP11-707M1.1,RP11-72M10.5,MTND1P35,TRIM49C,
../firstrun/newGeneCopies/PDX1/PDX1_partitions/PDX1_group1.fasta	../firstrun/newGeneCopies/PDX1/PDX1_partitions/PDX1_group1_PDX1OOOPLUT.fasta	PDX1,PLUT,
../firstrun/newGeneCopies/CLDN4/CLDN4_partitions/CLDN4_group4.fasta	../firstrun/newGeneCopies/CLDN4/CLDN4_partitions/CLDN4_group4_CLDN4OOOMETTL27.fasta	METTL27,CLDN4,
../firstrun/newGeneCopies/BRPF3/BRPF3_partitions/BRPF3_group1.fasta	../firstrun/newGeneCopies/BRPF3/BRPF3_partitions/BRPF3_group1_BRPF3OOORP1-179N16v6.fasta	RP1-179N16.6,BRPF3,
../firstrun/newGeneCopies/GJB1/GJB1_partitions/GJB1_group1.fasta	../firstrun/newGeneCopies/GJB1/GJB1_partitions/GJB1_group1_GJB1.fasta	GJB1,
../firstrun/newGeneCopies/FABP12/FABP12_partitions/FABP12_group2.fasta	../firstrun/newGeneCopies/FABP12/FABP12_partitions/FABP12_group2_FABP12OOOFTH1P11OOORP11-157I4v4.fasta	RP11-257P3.3,FABP12,RP11-157I4.4,FTH1P11,
../firstrun/newGeneCopies/PRRT4/PRRT4_partitions/PRRT4_group1.fasta	../firstrun/newGeneCopies/PRRT4/PRRT4_partitions/PRRT4_group1_PRRT4.fasta	PRRT4,
../firstrun/newGeneCopies/CCL4/CCL4_partitions/CCL4_group1.fasta	../firstrun/newGeneCopies/CCL4/CCL4_partitions/CCL4_group1_CCL4OOOCCL4L2OOOMetazoa_SRP.fasta	CCL4L2,Metazoa_SRP,RN7SL301P,CCL4,
../firstrun/newGeneCopies/ERVV/ERVV_partitions/ERVV_group1.fasta	../firstrun/newGeneCopies/ERVV/ERVV_partitions/ERVV_group1_ERVV-1OOOERVV-2OOOCTD-2620I22v3.fasta	ERVV-2,ZNF702P,CTD-2620I22.3,ERVV-1,
../firstrun/newGeneCopies/ZNF273/ZNF273_partitions/ZNF273_group3.fasta	../firstrun/newGeneCopies/ZNF273/ZNF273_partitions/ZNF273_group3_ZNF273OOOMTDHP1OOORP11-797H7v5.fasta	RP11-797H7.7,ZNF273,RP11-797H7.5,MTDHP1,VN1R42P,
../firstrun/newGeneCopies/HLA-F/HLA-F_partitions/HLA-F_group1.fasta	../firstrun/newGeneCopies/HLA-F/HLA-F_partitions/HLA-F_group1_HLA-FOOOHLA-F-AS1OOODAQB-335A13v8.fasta	HLA-F,IFITM4P,MICE,HCG4P11,HLA-F-AS1,HCG9P5,RPL23AP1,XXbac-BPG170G13.32,DAQB-335A13.8,Y_RNA,
../firstrun/newGeneCopies/TIMM22/TIMM22_partitions/TIMM22_group1.fasta	../firstrun/newGeneCopies/TIMM22/TIMM22_partitions/TIMM22_group1_TIMM22OOOABR.fasta	ABR,TIMM22,
../firstrun/newGeneCopies/GAL3ST3/GAL3ST3_partitions/GAL3ST3_group1.fasta	../firstrun/newGeneCopies/GAL3ST3/GAL3ST3_partitions/GAL3ST3_group1_GAL3ST3OOORP11-1167A19v16OOOSF3B2.fasta	GAL3ST3,SF3B2,RP11-1167A19.16,
../firstrun/newGeneCopies/ANKRD65/ANKRD65_partitions/ANKRD65_group1.fasta	../firstrun/newGeneCopies/ANKRD65/ANKRD65_partitions/ANKRD65_group1_ANKRD65OOORP4-758J18v7OOOTMEM88B.fasta	TMEM88B,RP4-758J18.7,ANKRD65,
../firstrun/newGeneCopies/LRRC40/LRRC40_partitions/LRRC40_group1.fasta	../firstrun/newGeneCopies/LRRC40/LRRC40_partitions/LRRC40_group1_LRRC40OOOLRRC7OOORN7SL242P.fasta	LRRC7,RN7SL242P,SRSF11,LRRC40,
../firstrun/newGeneCopies/D2HGDH/D2HGDH_partitions/D2HGDH_group1.fasta	../firstrun/newGeneCopies/D2HGDH/D2HGDH_partitions/D2HGDH_group1_D2HGDHOOOAC114730v7OOOAC114730v8.fasta	D2HGDH,AC114730.8,AC114730.7,
../firstrun/newGeneCopies/CCDC144A/CCDC144A_partitions/CCDC144A_group1.fasta	../firstrun/newGeneCopies/CCDC144A/CCDC144A_partitions/CCDC144A_group1_CCDC144AOOOAC004702v2OOOAC107982v4.fasta	PRPSAP2,CCDC144CP,RP11-219A15.1,Metazoa_SRP,UPF3AP1,RNU6-1178P,RNU6-405P,CCDC144NL,CCDC144A,RP11-121A13.3,AC107983.4,CLCP2,UPF3AP2,FAM106A,CCDC144B,UPF3A,RN7SL627P,SPECC1,USP32P3,RN7SL620P,CCDC144NL-AS1,RNU6-467P,AC107982.4,AC004702.2,
../firstrun/newGeneCopies/ABHD17A/ABHD17A_partitions/ABHD17A_group2.fasta	../firstrun/newGeneCopies/ABHD17A/ABHD17A_partitions/ABHD17A_group2_ABHD17AOOOABHD17AP1OOOABHD17AP3.fasta	NBPF12,ABHD17AP3,ABHD17AP5,CCDC144NL,NBPF11,CENPF,ABHD17A,ABHD17AP4,CTB-31O20.9,CTB-31O20.2,ABHD17AP1,ABHD17AP6,UBE2V1P13,PCDH15,
../firstrun/newGeneCopies/AKAP10/AKAP10_partitions/AKAP10_group1.fasta	../firstrun/newGeneCopies/AKAP10/AKAP10_partitions/AKAP10_group1_AKAP10OOORP11-209D14v4.fasta	AKAP10,RP11-209D14.4,
../firstrun/newGeneCopies/U2AF2/U2AF2_partitions/U2AF2_group2.fasta	../firstrun/newGeneCopies/U2AF2/U2AF2_partitions/U2AF2_group2_U2AF2OOOCCDC106OOOCTD-2537I9v12.fasta	U2AF2,CCDC106,CTD-2537I9.12,EPN1,CTD-2537I9.13,
../firstrun/newGeneCopies/ZNF829/ZNF829_partitions/ZNF829_group1.fasta	../firstrun/newGeneCopies/ZNF829/ZNF829_partitions/ZNF829_group1_ZNF829OOORPL31P61OOOZNF345.fasta	RPL31P61,ZNF345,ZNF568,ZNF829,
../firstrun/newGeneCopies/SMG1/SMG1_partitions/SMG1_group4.fasta	../firstrun/newGeneCopies/SMG1/SMG1_partitions/SMG1_group4_BOLA2-SMG1P6OOOSMG1OOOSMG1P1.fasta	BOLA2,RP11-1035H13.3,CORO1A,PDXDC1,RP11-347C12.12,SMG1P6,MIR3680-1,CTB-134H23.3,MIR3680-2,BOLA2B,RRN3P2,SMG1P4,SMG1P7,SMG1P5,RP11-1035H13.2,ARL6IP1,ENSG00000288373,CTD-2288F12.1,SLC7A5P2,SMG1P3,CORO1A-AS1,SLC7A5,SLC7A5P1,CTB-31N19.7,CA5A,NPIPB3,CDR2,ENSG00000283826,SMG1P2,SLX1A,ENSG00000284330,RP11-345J4.6,BOLA2-SMG1P6,NPIPB4,SLX1A-SULT1A3,RP11-368N21.5,RRN3,RRN3P1,RP11-231C14.10,ENSG00000283892,EXOSC6,RRN3P3,SMG1,RP11-345J4.11,SMG1P1,RP11-426C22.3,NPIPB5,
../firstrun/newGeneCopies/DUSP12/DUSP12_partitions/DUSP12_group1.fasta	../firstrun/newGeneCopies/DUSP12/DUSP12_partitions/DUSP12_group1_DUSP12.fasta	DUSP12,
../firstrun/newGeneCopies/GSTA3/GSTA3_partitions/GSTA3_group2.fasta	../firstrun/newGeneCopies/GSTA3/GSTA3_partitions/GSTA3_group2_GSTA3.fasta	GSTA3,
../firstrun/newGeneCopies/PCYOX1/PCYOX1_partitions/PCYOX1_group1.fasta	../firstrun/newGeneCopies/PCYOX1/PCYOX1_partitions/PCYOX1_group1_PCYOX1OOOSNRPG.fasta	SNRPG,PCYOX1,
../firstrun/newGeneCopies/SAA2/SAA2_partitions/SAA2_group1.fasta	../firstrun/newGeneCopies/SAA2/SAA2_partitions/SAA2_group1_SAA2OOOSAA2-SAA4OOORNA5SP333.fasta	RNA5SP333,RNA5SP334,SAA2-SAA4,ST13P5,SAA1,SAA4,SAA2,
../firstrun/newGeneCopies/SNX3/SNX3_partitions/SNX3_group2.fasta	../firstrun/newGeneCopies/SNX3/SNX3_partitions/SNX3_group2_SNX3OOORNA5SP212OOORP1-128O3v5.fasta	RP1-128O3.5,SNX3,RP1-128O3.7,RNA5SP212,
../firstrun/newGeneCopies/TPRA1/TPRA1_partitions/TPRA1_group1.fasta	../firstrun/newGeneCopies/TPRA1/TPRA1_partitions/TPRA1_group1_TPRA1OOOMCM2OOOMIR6825.fasta	MCM2,TPRA1,RP11-153F10.2,MIR6825,MIR7976,
../firstrun/newGeneCopies/UBL4A/UBL4A_partitions/UBL4A_group1.fasta	../firstrun/newGeneCopies/UBL4A/UBL4A_partitions/UBL4A_group1_UBL4AOOOLAGE3OOOPLXNA3.fasta	SLC10A3,LAGE3,PLXNA3,UBL4A,
../firstrun/newGeneCopies/NADSYN/NADSYN_partitions/NADSYN_group3.fasta	../firstrun/newGeneCopies/NADSYN/NADSYN_partitions/NADSYN_group3_NADSYN1OOODHCR7OOOMIR6754.fasta	RP11-660L16.2,NADSYN1,RP11-684B2.3,DHCR7,MIR6754,
../firstrun/newGeneCopies/FOXM1/FOXM1_partitions/FOXM1_group1.fasta	../firstrun/newGeneCopies/FOXM1/FOXM1_partitions/FOXM1_group1_FOXM1OOOITFG2OOORHNO1.fasta	TULP3,RHNO1,ITFG2,FOXM1,TEX52,
../firstrun/newGeneCopies/URAD/URAD_partitions/URAD_group1.fasta	../firstrun/newGeneCopies/URAD/URAD_partitions/URAD_group1_URADOOORN7SL272P.fasta	URAD,RN7SL272P,
../firstrun/newGeneCopies/FAM193B/FAM193B_partitions/FAM193B_group1.fasta	../firstrun/newGeneCopies/FAM193B/FAM193B_partitions/FAM193B_group1_FAM193BOOOFAM193B-DTOOODDX41.fasta	DDX41,FAM193B,FAM193B-DT,
../firstrun/newGeneCopies/TRIM48/TRIM48_partitions/TRIM48_group3.fasta	../firstrun/newGeneCopies/TRIM48/TRIM48_partitions/TRIM48_group3_TRIM48OOOMTND1P35OOORP11-163O19v1.fasta	TRIM49D2,TRIM51BP,TRIM49,TRIM51EP,TRIM53AP,RP11-707M1.7,TRIM53BP,TRIM48,RP11-163O19.10,RP11-738O11.9,RP11-707M1.1,TRIM49C,RP11-72M10.2,TRIM51DP,MTND1P35,RP11-163O19.1,TRIM51GP,TRIM53CP,TRIM49D1,TRIM51,
../firstrun/newGeneCopies/PRPF31/PRPF31_partitions/PRPF31_group1.fasta	../firstrun/newGeneCopies/PRPF31/PRPF31_partitions/PRPF31_group1_PRPF31OOOAC012314v8OOOENSG00000274144.fasta	AC012314.8,ENSG00000276421,ENSG00000277707,TFPT,ENSG00000274651,ENSG00000277953,ENSG00000277154,PRPF31,ENSG00000274894,ENSG00000275117,ENSG00000274144,
../firstrun/newGeneCopies/TRIM77/TRIM77_partitions/TRIM77_group1.fasta	../firstrun/newGeneCopies/TRIM77/TRIM77_partitions/TRIM77_group1_TRIM77OOOTRIM77BP.fasta	TRIM77,TRIM77BP,
../firstrun/newGeneCopies/FAM98/FAM98_partitions/FAM98_group3.fasta	../firstrun/newGeneCopies/FAM98/FAM98_partitions/FAM98_group3_FAM98COOORASGRP4OOOSPRED3.fasta	SPRED3,FAM98C,RASGRP4,
../firstrun/newGeneCopies/SZRD1/SZRD1_partitions/SZRD1_group1.fasta	../firstrun/newGeneCopies/SZRD1/SZRD1_partitions/SZRD1_group1_SZRD1OOOFBXO42OOORPL22P3.fasta	FBXO42,SZRD1,RPL22P3,SPATA21,
../firstrun/newGeneCopies/PRKCG/PRKCG_partitions/PRKCG_group1.fasta	../firstrun/newGeneCopies/PRKCG/PRKCG_partitions/PRKCG_group1_PRKCGOOOCACNG7OOOMYADM.fasta	MYADM,PRKCG,CACNG7,
../firstrun/newGeneCopies/PKP3/PKP3_partitions/PKP3_group1.fasta	../firstrun/newGeneCopies/PKP3/PKP3_partitions/PKP3_group1_PKP3OOOSIGIRR.fasta	PKP3,SIGIRR,
../firstrun/newGeneCopies/ASL/ASL_partitions/ASL_group1.fasta	../firstrun/newGeneCopies/ASL/ASL_partitions/ASL_group1_ASLOOOAC068533v7.fasta	AC068533.7,ASL,
../firstrun/newGeneCopies/DHRS7B/DHRS7B_partitions/DHRS7B_group2.fasta	../firstrun/newGeneCopies/DHRS7B/DHRS7B_partitions/DHRS7B_group2_DHRS7B.fasta	DHRS7B,
../firstrun/newGeneCopies/DHRS7B/DHRS7B_partitions/DHRS7B_group1.fasta	../firstrun/newGeneCopies/DHRS7B/DHRS7B_partitions/DHRS7B_group1_DHRS7B.fasta	DHRS7B,
../firstrun/newGeneCopies/SNTG2/SNTG2_partitions/SNTG2_group1.fasta	../firstrun/newGeneCopies/SNTG2/SNTG2_partitions/SNTG2_group1_SNTG2OOOSNTG2-AS1OOOAC114808v2.fasta	SNTG2,SNTG2-AS1,AC114808.3,AC114808.2,
../firstrun/newGeneCopies/SNTG2/SNTG2_partitions/SNTG2_group5.fasta	../firstrun/newGeneCopies/SNTG2/SNTG2_partitions/SNTG2_group5_SNTG2OOOAC108462v1OOOAC141930v2.fasta	SNTG2,AC141930.2,AC108462.1,
../firstrun/newGeneCopies/SLC52A3/SLC52A3_partitions/SLC52A3_group1.fasta	../firstrun/newGeneCopies/SLC52A3/SLC52A3_partitions/SLC52A3_group1_SLC52A3.fasta	SLC52A3,
../firstrun/newGeneCopies/CYP21A2/CYP21A2_partitions/CYP21A2_group2.fasta	../firstrun/newGeneCopies/CYP21A2/CYP21A2_partitions/CYP21A2_group2_CYP21A2OOOC2OOOC2-AS1.fasta	TNXB,EHMT2,C4B-AS1,STK19,DASS-36P22.4,STK19B,DAQB-331I12.5,MIR1236,C4B,C2-AS1,TNXA,XXbac-BPG116M5.15,XXbac-BPG116M5.17,CYP21A1P,ENSG00000269167,SLC44A4,CYP21A2,C4A-AS1,CFB,ZBTB12,DXO,C2,EHMT2-AS1,NELFE,SKIV2L,NEU1,C4B_2,C4A,DAQB-331I12.15,
../firstrun/newGeneCopies/DEFA6/DEFA6_partitions/DEFA6_group1.fasta	../firstrun/newGeneCopies/DEFA6/DEFA6_partitions/DEFA6_group1_DEFA6OOOGS1-24F4v3.fasta	DEFA6,GS1-24F4.3,
../firstrun/newGeneCopies/TCEAL/TCEAL_partitions/TCEAL_group3.fasta	../firstrun/newGeneCopies/TCEAL/TCEAL_partitions/TCEAL_group3_TCEAL1OOOTCEAL2OOOTCEAL3.fasta	TCEAL1,TCEAL3-AS1,TCEAL3,TCEAL6,GHc-351F8.3,TCEAL2,
../firstrun/newGeneCopies/LIMK1/LIMK1_partitions/LIMK1_group1.fasta	../firstrun/newGeneCopies/LIMK1/LIMK1_partitions/LIMK1_group1_LIMK1.fasta	LIMK1,
../firstrun/newGeneCopies/MAGEC1/MAGEC1_partitions/MAGEC1_group1.fasta	../firstrun/newGeneCopies/MAGEC1/MAGEC1_partitions/MAGEC1_group1_MAGEC1OOORP1-142F18v2OOORP11-485I9v1.fasta	RP1-142F18.2,RP11-485I9.1,MAGEC1,
../firstrun/newGeneCopies/NUPR1/NUPR1_partitions/NUPR1_group1.fasta	../firstrun/newGeneCopies/NUPR1/NUPR1_partitions/NUPR1_group1_NUPR1OOORP11-231C14v10OOORP11-666O2v7.fasta	RP11-666O2.7,NUPR1,RP11-231C14.10,
../firstrun/newGeneCopies/NFKB2/NFKB2_partitions/NFKB2_group11.fasta	../firstrun/newGeneCopies/NFKB2/NFKB2_partitions/NFKB2_group11_NFKB2OOOPSD.fasta	NFKB2,PSD,
../firstrun/newGeneCopies/MYLK/MYLK_partitions/MYLK_group12.fasta	../firstrun/newGeneCopies/MYLK/MYLK_partitions/MYLK_group12_MYLK2.fasta	MYLK2,
../firstrun/newGeneCopies/MYLK/MYLK_partitions/MYLK_group11.fasta	../firstrun/newGeneCopies/MYLK/MYLK_partitions/MYLK_group11_MYLK3OOORP11-480G7v2.fasta	MYLK3,RP11-480G7.2,
../firstrun/newGeneCopies/TSR2/TSR2_partitions/TSR2_group1.fasta	../firstrun/newGeneCopies/TSR2/TSR2_partitions/TSR2_group1_TSR2OOOFGD1.fasta	TSR2,FGD1,
../firstrun/newGeneCopies/TP53TG/TP53TG_partitions/TP53TG_group2.fasta	../firstrun/newGeneCopies/TP53TG/TP53TG_partitions/TP53TG_group2_TP53TG3OOOTP53TG3BOOOTP53TG3C.fasta	TP53TG3,RP11-56L13.7,RP11-1437A8.6,TP53TG3F,ENSG00000274175,TP53TG3E,TP53TG3C,ENSG00000275869,RP11-1437A8.3,TP53TG3D,RP11-586K12.8,TP53TG3B,
../firstrun/newGeneCopies/SPDYE14/SPDYE14_partitions/SPDYE14_group2.fasta	../firstrun/newGeneCopies/SPDYE14/SPDYE14_partitions/SPDYE14_group2_SPDYE14OOOSPDYE14POOOAC004951v6.fasta	SPDYE18,SPDYE9,SPDYE13,SPDYE17,SPDYE10P,CH17-264B6.3,CH17-264B6.6,SPDYE13P,RP11-514P8.7,CH17-264B6.1,PMS2P4,POLR2J4,SPDYE16,SPDYE15,SPDYE7P,SPDYE2,SPDYE6,SPDYE14P,PMS2P10,RP5-1165K10.2,SPDYE2B,SPDYE5,RP11-467H10.2,RP5-1022I14.2,PMS2P8,SPDYE11,DTX2P1-UPK3BP1-PMS2P11,SPDYE14,RP11-514P8.10,AC004951.6,POLR2J3,SPDYE3,SPDYE1,SPDYE15P,PMS2P1,AC004980.9,PMS2P6,RP11-577H5.5,PMS2P7,SPDYE12P,SPDYE21,SPDYE8,PMS2P2,
../firstrun/newGeneCopies/PCNA/PCNA_partitions/PCNA_group4.fasta	../firstrun/newGeneCopies/PCNA/PCNA_partitions/PCNA_group4_PCNAOOOCDS2OOOENSG10010135905v1.fasta	ENSG10010135905.1,CDS2,Y_RNA,TMEM230,PCNA,
../firstrun/newGeneCopies/ZNF33B/ZNF33B_partitions/ZNF33B_group2.fasta	../firstrun/newGeneCopies/ZNF33B/ZNF33B_partitions/ZNF33B_group2_ZNF33BOOOAL022345v10OOOAL022345v11.fasta	RNU6-795P,AL022345.7,RNU6-1170P,ZNF33A,AL022345.11,RP11-1021O19.2,ZNF33B,AL022345.10,AL022345.12,
../firstrun/newGeneCopies/SHOX/SHOX_partitions/SHOX_group2.fasta	../firstrun/newGeneCopies/SHOX/SHOX_partitions/SHOX_group2_SHOX.fasta	SHOX,
../firstrun/newGeneCopies/NELFE/NELFE_partitions/NELFE_group1.fasta	../firstrun/newGeneCopies/NELFE/NELFE_partitions/NELFE_group1_NELFEOOOC2OOOCFB.fasta	CYP21A2,XXbac-BPG116M5.17,SKIV2L,C2,CFB,NELFE,MIR1236,
../firstrun/newGeneCopies/ACADVL/ACADVL_partitions/ACADVL_group1.fasta	../firstrun/newGeneCopies/ACADVL/ACADVL_partitions/ACADVL_group1_ACADVLOOODLG4OOODVL2.fasta	ACADVL,DLG4,MIR324,DVL2,
../firstrun/newGeneCopies/OPRL1/OPRL1_partitions/OPRL1_group1.fasta	../firstrun/newGeneCopies/OPRL1/OPRL1_partitions/OPRL1_group1_OPRL1OOOLKAAEAR1OOOMYT1.fasta	RP5-1022E24.7,LKAAEAR1,NPBWR2,MYT1,OPRL1,RGS19,
../firstrun/newGeneCopies/GTF3/GTF3_partitions/GTF3_group13.fasta	../firstrun/newGeneCopies/GTF3/GTF3_partitions/GTF3_group13_GTF3AOOOMTIF3.fasta	GTF3A,MTIF3,
../firstrun/newGeneCopies/GTF3/GTF3_partitions/GTF3_group4.fasta	../firstrun/newGeneCopies/GTF3/GTF3_partitions/GTF3_group4_GTF3C6.fasta	GTF3C6,
../firstrun/newGeneCopies/CCDC62/CCDC62_partitions/CCDC62_group1.fasta	../firstrun/newGeneCopies/CCDC62/CCDC62_partitions/CCDC62_group1_CCDC62.fasta	CCDC62,
../firstrun/newGeneCopies/ARMC10/ARMC10_partitions/ARMC10_group1.fasta	../firstrun/newGeneCopies/ARMC10/ARMC10_partitions/ARMC10_group1_ARMC10OOOARMC10P1OOOCRYZP1.fasta	ARMC10,ARMC10P1,CRYZP1,NAPEPLD,FBXL13,
../firstrun/newGeneCopies/ITGB1BP2/ITGB1BP2_partitions/ITGB1BP2_group3.fasta	../firstrun/newGeneCopies/ITGB1BP2/ITGB1BP2_partitions/ITGB1BP2_group3_ITGB1BP2OOONONO.fasta	NONO,ITGB1BP2,
../firstrun/newGeneCopies/SMDT1/SMDT1_partitions/SMDT1_group1.fasta	../firstrun/newGeneCopies/SMDT1/SMDT1_partitions/SMDT1_group1_SMDT1OOOCYP2D6OOOCYP2D7.fasta	ENSG00000280705,ENSG00000281266,RP4-669P10.16,ENSG00000272000,SMDT1,OLA1P1,RP4-669P10.19,CYP2D6,ENSG00000282874,ENSG00000281053,ENSG00000284297,NDUFA6-DT,RP4-669P10.20,ENSG00000282969,ENSG00000284131,PHETA2,ENSG00000283373,ENSG00000283089,ENSG00000281908,ENSG00000282979,CYP2D7,NDUFA6,RP1-257I20.14,
../firstrun/newGeneCopies/ANKRD23/ANKRD23_partitions/ANKRD23_group1.fasta	../firstrun/newGeneCopies/ANKRD23/ANKRD23_partitions/ANKRD23_group1_ANKRD23OOOANKRD39OOOCNNM3.fasta	ANKRD23,CNNM3,ANKRD39,SEMA4C,
../firstrun/newGeneCopies/CALB2/CALB2_partitions/CALB2_group1.fasta	../firstrun/newGeneCopies/CALB2/CALB2_partitions/CALB2_group1_CALB2OOOLINC02136.fasta	CALB2,LINC02136,
../firstrun/newGeneCopies/MUC1/MUC1_partitions/MUC1_group1.fasta	../firstrun/newGeneCopies/MUC1/MUC1_partitions/MUC1_group1_MUC1OOOMIR92BOOORP11-201K10v3.fasta	THBS3-AS1,MUC1,THBS3,MIR92B,RP11-201K10.3,TRIM46,
../firstrun/newGeneCopies/RHCE/RHCE_partitions/RHCE_group1.fasta	../firstrun/newGeneCopies/RHCE/RHCE_partitions/RHCE_group1_RHCEOOOMACO1OOORHD.fasta	SDHDP6,RP3-469D22.1,RHCE,RSRP1,MACO1,RHD,TMEM50A,
../firstrun/newGeneCopies/SPIDR/SPIDR_partitions/SPIDR_group8.fasta	../firstrun/newGeneCopies/SPIDR/SPIDR_partitions/SPIDR_group8_SPIDROOOCEBPDOOORNU6-665P.fasta	SPIDR,RNU6-665P,CEBPD,
../firstrun/newGeneCopies/SPIDR/SPIDR_partitions/SPIDR_group4.fasta	../firstrun/newGeneCopies/SPIDR/SPIDR_partitions/SPIDR_group4_SPIDR.fasta	SPIDR,
../firstrun/newGeneCopies/SPIDR/SPIDR_partitions/SPIDR_group1.fasta	../firstrun/newGeneCopies/SPIDR/SPIDR_partitions/SPIDR_group1_SPIDROOORP11-697N18v1OOORP11-697N18v2.fasta	RP11-697N18.3,RP11-697N18.1,RP11-697N18.4,SPIDR,RP11-697N18.2,
../firstrun/newGeneCopies/DEFB130/DEFB130_partitions/DEFB130_group1.fasta	../firstrun/newGeneCopies/DEFB130/DEFB130_partitions/DEFB130_group1_DEFB130AOOODEFB130BOOODEFB130C.fasta	RP11-849H4.2,DEFB130A,DEFB130B,DEFB130C,DEFB130D,
../firstrun/newGeneCopies/COPS8/COPS8_partitions/COPS8_group1.fasta	../firstrun/newGeneCopies/COPS8/COPS8_partitions/COPS8_group1_COPS8OOOAC105760v2.fasta	COPS8,AC105760.2,
../firstrun/newGeneCopies/CTD-2528L19.4/CTD-2528L19.4_partitions/CTD-2528L19.4_group1.fasta	../firstrun/newGeneCopies/CTD-2528L19.4/CTD-2528L19.4_partitions/CTD-2528L19.4_group1_CTD-2528L19v4OOOSELENOKP1OOOZFP30.fasta	SELENOKP1,ZNF781,CTD-2528L19.4,ZNF607,ZFP30,
../firstrun/newGeneCopies/SLC17A5/SLC17A5_partitions/SLC17A5_group1.fasta	../firstrun/newGeneCopies/SLC17A5/SLC17A5_partitions/SLC17A5_group1_SLC17A5OOORPS27P15.fasta	SLC17A5,RPS27P15,
../firstrun/newGeneCopies/RABL6/RABL6_partitions/RABL6_group1.fasta	../firstrun/newGeneCopies/RABL6/RABL6_partitions/RABL6_group1_RABL6OOOAC103564v6OOOAC103564v7.fasta	NCLP1,AC103564.6,AC103564.7,CCDC183-AS1,RABL6,RP11-216L13.18,RP11-216L13.19,CCDC183,RP11-805F19.4,MIR4292,
../firstrun/newGeneCopies/MOSMO/MOSMO_partitions/MOSMO_group2.fasta	../firstrun/newGeneCopies/MOSMO/MOSMO_partitions/MOSMO_group2_MOSMOOOOCTD-2649C14v3OOORP11-101E7v2.fasta	MOSMO,CTD-2649C14.3,RP11-101E7.2,
../firstrun/newGeneCopies/SAGE1/SAGE1_partitions/SAGE1_group1.fasta	../firstrun/newGeneCopies/SAGE1/SAGE1_partitions/SAGE1_group1_SAGE1OOOCT45A10OOOCT45A2.fasta	CT45A9,SAGE1,CT45A2,CT45A6,CT45A5,SAGE4P,CT45A7,CT45A8,CT45A3,SAGE2P,CT45A10,
../firstrun/newGeneCopies/CEL/CEL_partitions/CEL_group7.fasta	../firstrun/newGeneCopies/CEL/CEL_partitions/CEL_group7_CELOOOCELP.fasta	CELP,CEL,
../firstrun/newGeneCopies/ATP2A1/ATP2A1_partitions/ATP2A1_group1.fasta	../firstrun/newGeneCopies/ATP2A1/ATP2A1_partitions/ATP2A1_group1_ATP2A1OOOATP2A1-AS1OOOENSG10010137899v1.fasta	ATP2A1-AS1,ENSG10010137899.1,RABEP2,ATP2A1,RP11-231C14.10,
../firstrun/newGeneCopies/CTC-454I21.3/CTC-454I21.3_partitions/CTC-454I21.3_group25.fasta	../firstrun/newGeneCopies/CTC-454I21.3/CTC-454I21.3_partitions/CTC-454I21.3_group25_CTC-454I21v3OOOCTC-454I21v4OOOCTD-2293H3v1.fasta	CTD-2293H3.1,ZNF585A,CTC-454I21.3,ZNF420,ZNF585B,CTC-454I21.4,
../firstrun/newGeneCopies/PNPLA7/PNPLA7_partitions/PNPLA7_group22.fasta	../firstrun/newGeneCopies/PNPLA7/PNPLA7_partitions/PNPLA7_group22_PNPLA7OOODPH7OOOMRPL41.fasta	DPH7,NSMF,PNPLA7,MRPL41,
../firstrun/newGeneCopies/MAFK/MAFK_partitions/MAFK_group1.fasta	../firstrun/newGeneCopies/MAFK/MAFK_partitions/MAFK_group1_MAFKOOOTMEM184A.fasta	TMEM184A,MAFK,
../firstrun/newGeneCopies/RP11-152F13.10/RP11-152F13.10_partitions/RP11-152F13.10_group1.fasta	../firstrun/newGeneCopies/RP11-152F13.10/RP11-152F13.10_partitions/RP11-152F13.10_group1_RP11-152F13v10OOOCH17-66N5v1OOOCPEB1.fasta	CH17-66N5.1,RPS17,DNM1P38,CPEB1,RP11-379H8.1,RP11-152F13.10,
../firstrun/newGeneCopies/FOLR/FOLR_partitions/FOLR_group2.fasta	../firstrun/newGeneCopies/FOLR/FOLR_partitions/FOLR_group2_FOLR1OOOFOLR3OOORP11-807H22v6.fasta	RP11-807H22.7,RP11-807H22.6,FOLR1,FOLR3,RPEP6,
../firstrun/newGeneCopies/FOLR/FOLR_partitions/FOLR_group1.fasta	../firstrun/newGeneCopies/FOLR/FOLR_partitions/FOLR_group1_FOLR3OOOANAPC15.fasta	FOLR3,ANAPC15,
../firstrun/newGeneCopies/FOLR/FOLR_partitions/FOLR_group5.fasta	../firstrun/newGeneCopies/FOLR/FOLR_partitions/FOLR_group5_FOLR2OOOINPPL1.fasta	INPPL1,FOLR2,
../firstrun/newGeneCopies/KB-1995A5/KB-1995A5_partitions/KB-1995A5_group1.fasta	../firstrun/newGeneCopies/KB-1995A5/KB-1995A5_partitions/KB-1995A5_group1_KB-1995A5v4OOOKB-1995A5v5OOOKB-1995A5v6.fasta	GGT4P,FAM247B,BCR,BCRP2,BCRP5,KB-1995A5.6,TMEM191A,GGT8P,POM121L7P,FAM247A,CH17-420I24.1,ENSG00000278633,BCRP4,AC008132.13,BCRP7,POM121L9P,POM121L8P,POM121L1P,POM121L3P,GGT3P,GGTLC4P,GGTLC2,GGTLC5P,GGT1,POM121L4P,KB-1592A4.15,BCRP6,KB-1995A5.5,RP5-831C21.1,KB-1995A5.4,GGT5,GGT2,GGTLC1,RP11-341D18.9,AP000356.2,BCRP1,BCRP3,GGTLC3,ENSG00000276017,
../firstrun/newGeneCopies/BAZ1B/BAZ1B_partitions/BAZ1B_group1.fasta	../firstrun/newGeneCopies/BAZ1B/BAZ1B_partitions/BAZ1B_group1_BAZ1BOOORNU6-1198P.fasta	BAZ1B,RNU6-1198P,
../firstrun/newGeneCopies/TMEM141/TMEM141_partitions/TMEM141_group1.fasta	../firstrun/newGeneCopies/TMEM141/TMEM141_partitions/TMEM141_group1_TMEM141OOOATP6V1G1P3OOOCCDC183.fasta	RP11-216L13.19,CCDC183,TMEM141,ATP6V1G1P3,RP11-216L13.17,
../firstrun/newGeneCopies/RP11-364B14.3/RP11-364B14.3_partitions/RP11-364B14.3_group2.fasta	../firstrun/newGeneCopies/RP11-364B14.3/RP11-364B14.3_partitions/RP11-364B14.3_group2_RP11-364B14v3OOORN7SL727P.fasta	RP11-364B14.3,RN7SL727P,
../firstrun/newGeneCopies/MAPT/MAPT_partitions/MAPT_group5.fasta	../firstrun/newGeneCopies/MAPT/MAPT_partitions/MAPT_group5_MAPTOOOKANSL1.fasta	KANSL1,MAPT,
../firstrun/newGeneCopies/MAPT/MAPT_partitions/MAPT_group1.fasta	../firstrun/newGeneCopies/MAPT/MAPT_partitions/MAPT_group1_MAPTOOOMAPT-AS1OOOMAPT-IT1.fasta	RP11-669E14.4,MAPT-AS1,LINC02210-CRHR1,Metazoa_SRP,SPPL2C,STH,MAPT,MAPT-IT1,CRHR1,
../firstrun/newGeneCopies/ACTN3/ACTN3_partitions/ACTN3_group1.fasta	../firstrun/newGeneCopies/ACTN3/ACTN3_partitions/ACTN3_group1_ACTN3OOOCTD-3074O7v2OOOCTSF.fasta	ZDHHC24,CTD-3074O7.2,ACTN3,CTSF,
../firstrun/newGeneCopies/BST1/BST1_partitions/BST1_group1.fasta	../firstrun/newGeneCopies/BST1/BST1_partitions/BST1_group1_BST1OOORP11-115L11v1OOORP11-115L11v3.fasta	RP11-115L11.1,BST1,RP11-115L11.3,
../firstrun/newGeneCopies/PRDX3/PRDX3_partitions/PRDX3_group3.fasta	../firstrun/newGeneCopies/PRDX3/PRDX3_partitions/PRDX3_group3_PRDX3OOOSFXN4.fasta	PRDX3,SFXN4,
../firstrun/newGeneCopies/RBM19/RBM19_partitions/RBM19_group1.fasta	../firstrun/newGeneCopies/RBM19/RBM19_partitions/RBM19_group1_RBM19.fasta	RBM19,
../firstrun/newGeneCopies/RBM19/RBM19_partitions/RBM19_group2.fasta	../firstrun/newGeneCopies/RBM19/RBM19_partitions/RBM19_group2_RBM19OOORP11-438N16v5OOORP11-780K2v1.fasta	RBM19,RP11-438N16.5,RP11-780K2.1,
../firstrun/newGeneCopies/CHMP1A/CHMP1A_partitions/CHMP1A_group2.fasta	../firstrun/newGeneCopies/CHMP1A/CHMP1A_partitions/CHMP1A_group2_CHMP1AOOODPEP1OOOSPATA33.fasta	CHMP1A,DPEP1,SPATA33,
../firstrun/newGeneCopies/RGPD/RGPD_partitions/RGPD_group2.fasta	../firstrun/newGeneCopies/RGPD/RGPD_partitions/RGPD_group2_RGPD1OOORGPD2OOORGPD3.fasta	RGPD5,RGPD8,ANAPC1P4,MTATP8P2,WBP1P1,CH507-42P11.6,NDUFB4P5,ANAPC1,GACAT1,RGPD2,NDUFB4P6,CH507-42P11.7,AC108868.3,PLGLB2,GCC2-AS1,AC083899.3,LINC00313,ZC3H6,RGPD1,AC009963.3,LIMS1,LINC01669,RGPD4-AS1,RGPD3,ANAPC1P1,RGPD4,RANBP2,AC010095.6,PLGLB1,LINC00319,AP001048.4,RGPD6,ANAPC1P5,ANAPC1P3,WBP1P2,GCC2,PLG,RP13-511M20.1,PLGLA,NDUFB4P7,
../firstrun/newGeneCopies/COL6A1/COL6A1_partitions/COL6A1_group1.fasta	../firstrun/newGeneCopies/COL6A1/COL6A1_partitions/COL6A1_group1_COL6A1.fasta	COL6A1,
../firstrun/newGeneCopies/FANCA/FANCA_partitions/FANCA_group15.fasta	../firstrun/newGeneCopies/FANCA/FANCA_partitions/FANCA_group15_FANCAOOOSPIRE2OOOZNF276.fasta	SPIRE2,ZNF276,FANCA,
../firstrun/newGeneCopies/CYP2E/CYP2E_partitions/CYP2E_group1.fasta	../firstrun/newGeneCopies/CYP2E/CYP2E_partitions/CYP2E_group1_CYP2E1OOORP11-108K14v12OOORP11-108K14v13.fasta	CYP2E1,SYCE1,SCART1,RP11-108K14.12,RP11-108K14.13,
../firstrun/newGeneCopies/TM4SF19/TM4SF19_partitions/TM4SF19_group1.fasta	../firstrun/newGeneCopies/TM4SF19/TM4SF19_partitions/TM4SF19_group1_TM4SF19OOOTM4SF19-AS1OOOTM4SF19-DYNLT2B.fasta	DYNLT2B,TM4SF19-DYNLT2B,RP11-447L10.1,RNU6-910P,TM4SF19,TM4SF19-AS1,
../firstrun/newGeneCopies/SPATA21/SPATA21_partitions/SPATA21_group1.fasta	../firstrun/newGeneCopies/SPATA21/SPATA21_partitions/SPATA21_group1_SPATA21OOOSZRD1.fasta	SZRD1,SPATA21,
../firstrun/newGeneCopies/VCPKMT/VCPKMT_partitions/VCPKMT_group2.fasta	../firstrun/newGeneCopies/VCPKMT/VCPKMT_partitions/VCPKMT_group2_VCPKMTOOOSOS2.fasta	VCPKMT,SOS2,
../firstrun/newGeneCopies/SPAG11/SPAG11_partitions/SPAG11_group1.fasta	../firstrun/newGeneCopies/SPAG11/SPAG11_partitions/SPAG11_group1_SPAG11AOOOSPAG11B.fasta	SPAG11B,SPAG11A,
../firstrun/newGeneCopies/UPF3A/UPF3A_partitions/UPF3A_group3.fasta	../firstrun/newGeneCopies/UPF3A/UPF3A_partitions/UPF3A_group3_UPF3AOOOUPF3AP1OOOUPF3AP2.fasta	UPF3A,CLCP2,CCDC144CP,UPF3AP2,CCDC144B,CCDC144A,UPF3AP1,AC107983.4,RP11-219A15.1,
../firstrun/newGeneCopies/BTN3A/BTN3A_partitions/BTN3A_group1.fasta	../firstrun/newGeneCopies/BTN3A/BTN3A_partitions/BTN3A_group1_BTN3A1OOOBTN3A2OOOBTN3A3.fasta	BTN3A3,BTN3A2,BTN3A1,
../firstrun/newGeneCopies/H3-2/H3-2_partitions/H3-2_group1.fasta	../firstrun/newGeneCopies/H3-2/H3-2_partitions/H3-2_group1_H3-2OOOH2BC18OOOH2BP1.fasta	H3P4,RP11-439A17.4,HIST2H3PS2,HIST2H2BB,H2BC18,H3C13,H2BP2,H3-2,RP11-439A17.10,H2BP1,RP5-998N21.7,
../firstrun/newGeneCopies/TSPY/TSPY_partitions/TSPY_group7.fasta	../firstrun/newGeneCopies/TSPY/TSPY_partitions/TSPY_group7_TSPY1OOOTSPY10OOOTSPY11P.fasta	FAM197Y6,TSPY7P,RP11-492C2.1,FAM197Y7,RBMY1B,RBMY1E,TSPY2,TSPY10,FAM197Y8,RBMY1A3P,TSPY6P,TSPY8,TTTY20,RBMY1A1,TSPY22P,RBMY1F,RP11-441G8.1,AC007322.3,TSPY21P,FAM197Y3,TSPY4,TSPY23P,FAM197Y2,TSPY15P,AC010141.4,AC006158.9,FAM197Y4,FAM197Y5,AC010141.6,RBMY1J,TSPY1,FAM197Y9,TSPY11P,AC007322.5,TTTY23B,RBMY1D,AC006158.7,TSPY3,TSPY9P,TSPY13P,TTTY23,FAM197Y1,RBMY2FP,
../firstrun/newGeneCopies/DPEP2/DPEP2_partitions/DPEP2_group1.fasta	../firstrun/newGeneCopies/DPEP2/DPEP2_partitions/DPEP2_group1_DPEP2OOODUS2OOOKARS1P3.fasta	DUS2,KARS1P3,DPEP2,
../firstrun/newGeneCopies/DPEP2/DPEP2_partitions/DPEP2_group2.fasta	../firstrun/newGeneCopies/DPEP2/DPEP2_partitions/DPEP2_group2_DPEP2NBOOODDX28OOODUS2.fasta	DUS2,DPEP2NB,RNU6-359P,DDX28,
../firstrun/newGeneCopies/LAIR1/LAIR1_partitions/LAIR1_group1.fasta	../firstrun/newGeneCopies/LAIR1/LAIR1_partitions/LAIR1_group1_LAIR1OOOAC008746v10OOOLAIR2.fasta	LAIR2,LAIR1,AC008746.10,
../firstrun/newGeneCopies/MRM3/MRM3_partitions/MRM3_group1.fasta	../firstrun/newGeneCopies/MRM3/MRM3_partitions/MRM3_group1_MRM3OOOGLOD4OOORP11-676J12v8.fasta	MRM3,RP11-676J12.8,RP11-676J12.9,GLOD4,
../firstrun/newGeneCopies/PHETA/PHETA_partitions/PHETA_group2.fasta	../firstrun/newGeneCopies/PHETA/PHETA_partitions/PHETA_group2_PHETA2OOOCTA-250D10v24OOONAGA.fasta	CTA-250D10.24,SNORD13P1,SMDT1,PHETA2,NAGA,NDUFA6,
../firstrun/newGeneCopies/PHETA/PHETA_partitions/PHETA_group1.fasta	../firstrun/newGeneCopies/PHETA/PHETA_partitions/PHETA_group1_PHETA1OOOLINC02356.fasta	PHETA1,LINC02356,
../firstrun/newGeneCopies/ZNRD2/ZNRD2_partitions/ZNRD2_group1.fasta	../firstrun/newGeneCopies/ZNRD2/ZNRD2_partitions/ZNRD2_group1_ZNRD2OOOZNRD2-AS1OOOEHBP1L1.fasta	ZNRD2,EHBP1L1,ZNRD2-AS1,FAM89B,
../firstrun/newGeneCopies/ZNF101/ZNF101_partitions/ZNF101_group3.fasta	../firstrun/newGeneCopies/ZNF101/ZNF101_partitions/ZNF101_group3_ZNF101.fasta	ZNF101,
../firstrun/newGeneCopies/EHBP1/EHBP1_partitions/EHBP1_group9.fasta	../firstrun/newGeneCopies/EHBP1/EHBP1_partitions/EHBP1_group9_EHBP1L1OOOFAM89BOOOKCNK7.fasta	ZNRD2,FAM89B,KCNK7,EHBP1L1,
../firstrun/newGeneCopies/FAM185/FAM185_partitions/FAM185_group2.fasta	../firstrun/newGeneCopies/FAM185/FAM185_partitions/FAM185_group2_FAM185AOOOFAM185BPOOOAC007000v10.fasta	RP11-577H5.1,RP11-467H10.2,RP11-467H10.1,CCDC146,AC007000.10,FAM185BP,FAM185A,RP11-577H5.6,
../firstrun/newGeneCopies/HMGCS/HMGCS_partitions/HMGCS_group1.fasta	../firstrun/newGeneCopies/HMGCS/HMGCS_partitions/HMGCS_group1_HMGCS2.fasta	HMGCS2,
../firstrun/newGeneCopies/ATF7/ATF7_partitions/ATF7_group4.fasta	../firstrun/newGeneCopies/ATF7/ATF7_partitions/ATF7_group4_ATF7OOOATF7-NPFFOOONPFF.fasta	TARBP2,NPFF,RP11-793H13.3,ATF7-NPFF,ATF7,RP11-793H13.14,
../firstrun/newGeneCopies/ATF7/ATF7_partitions/ATF7_group9.fasta	../firstrun/newGeneCopies/ATF7/ATF7_partitions/ATF7_group9_ATF7IP2OOORP11-609N14v4.fasta	ATF7IP2,RP11-609N14.4,
../firstrun/newGeneCopies/ATF7/ATF7_partitions/ATF7_group6.fasta	../firstrun/newGeneCopies/ATF7/ATF7_partitions/ATF7_group6_ATF7OOOATF7-NPFFOOORP11-793H13v14.fasta	ATF7,ATF7-NPFF,RP11-793H13.14,
../firstrun/newGeneCopies/ATF7/ATF7_partitions/ATF7_group7.fasta	../firstrun/newGeneCopies/ATF7/ATF7_partitions/ATF7_group7_ATF7IP2OOORP11-609N14v1.fasta	ATF7IP2,RP11-609N14.1,
../firstrun/newGeneCopies/RP11-216L13.17/RP11-216L13.17_partitions/RP11-216L13.17_group2.fasta	../firstrun/newGeneCopies/RP11-216L13.17/RP11-216L13.17_partitions/RP11-216L13.17_group2_RP11-216L13v17OOOCCDC183OOORP11-216L13v18.fasta	TMEM141,RP11-216L13.19,RP11-216L13.17,RP11-216L13.18,CCDC183,
../firstrun/newGeneCopies/MXD1/MXD1_partitions/MXD1_group1.fasta	../firstrun/newGeneCopies/MXD1/MXD1_partitions/MXD1_group1_MXD1OOOSNRNP27.fasta	MXD1,SNRNP27,
../firstrun/newGeneCopies/PHF7/PHF7_partitions/PHF7_group1.fasta	../firstrun/newGeneCopies/PHF7/PHF7_partitions/PHF7_group1_PHF7OOOBAP1.fasta	PHF7,BAP1,
../firstrun/newGeneCopies/CASP10/CASP10_partitions/CASP10_group2.fasta	../firstrun/newGeneCopies/CASP10/CASP10_partitions/CASP10_group2_CASP10OOOMTND4LP13OOOMTND4P23.fasta	CASP10,MTND5P25,MTND4P23,MTND4LP13,
../firstrun/newGeneCopies/ANXA8/ANXA8_partitions/ANXA8_group3.fasta	../firstrun/newGeneCopies/ANXA8/ANXA8_partitions/ANXA8_group3_ANXA8OOOANXA8L1OOOCH17-335B8v4.fasta	FAM25C,ANXA8L1,FAM25G,CH17-335B8.4,CH17-360D5.2,RP11-96C23.12,ANXA8,LINC00842,RP11-144G6.13,FAM25BP,RP11-96C23.14,FAM25A,ICI-14BB7.1,ENSG00000288244,
../firstrun/newGeneCopies/DEAF1/DEAF1_partitions/DEAF1_group1.fasta	../firstrun/newGeneCopies/DEAF1/DEAF1_partitions/DEAF1_group1_DEAF1OOOAP006621v9OOOEPS8L2.fasta	DEAF1,AP006621.9,TMEM80,EPS8L2,RP11-754B17.1,
../firstrun/newGeneCopies/GPT2/GPT2_partitions/GPT2_group1.fasta	../firstrun/newGeneCopies/GPT2/GPT2_partitions/GPT2_group1_GPT2.fasta	GPT2,
../firstrun/newGeneCopies/RBM42/RBM42_partitions/RBM42_group1.fasta	../firstrun/newGeneCopies/RBM42/RBM42_partitions/RBM42_group1_RBM42.fasta	RBM42,
../firstrun/newGeneCopies/NME8/NME8_partitions/NME8_group1.fasta	../firstrun/newGeneCopies/NME8/NME8_partitions/NME8_group1_NME8OOOEPDR1.fasta	EPDR1,NME8,
../firstrun/newGeneCopies/DEFB108/DEFB108_partitions/DEFB108_group1.fasta	../firstrun/newGeneCopies/DEFB108/DEFB108_partitions/DEFB108_group1_DEFB108AOOODEFB108BOOODEFB108C.fasta	ZNF705B,DEFB108F,ZNF705D,ZNF705G,ENSG00000284958,DEFB108B,ZNF705A,DEFB108C,RP11-266K4.16,DEFB108E,ENSG00000284907,DEFB108A,DEFB108D,
../firstrun/newGeneCopies/MAGEH1/MAGEH1_partitions/MAGEH1_group1.fasta	../firstrun/newGeneCopies/MAGEH1/MAGEH1_partitions/MAGEH1_group1_MAGEH1OOOMIR4536-1OOOMIR4536-2.fasta	MIR4536-2,MIR4536-1,MAGEH1,RP11-541G7.4,
../firstrun/newGeneCopies/DEFB4/DEFB4_partitions/DEFB4_group1.fasta	../firstrun/newGeneCopies/DEFB4/DEFB4_partitions/DEFB4_group1_DEFB4AOOODEFB4BOOOHSPD1P2.fasta	DEFB4A,HSPD1P2,DEFB4B,HSPD1P3,
../firstrun/newGeneCopies/APLNR/APLNR_partitions/APLNR_group1.fasta	../firstrun/newGeneCopies/APLNR/APLNR_partitions/APLNR_group1_APLNR.fasta	APLNR,
../firstrun/newGeneCopies/GK/GK_partitions/GK_group9.fasta	../firstrun/newGeneCopies/GK/GK_partitions/GK_group9_GKOOOGK-AS1OOOGK-IT1.fasta	GK,GK-AS1,GK3P,KLHL2P1,GK4P,RP11-548H18.2,RP11-242C19.2,KLHL2,GK-IT1,
../firstrun/newGeneCopies/NLK/NLK_partitions/NLK_group3.fasta	../firstrun/newGeneCopies/NLK/NLK_partitions/NLK_group3_NLK.fasta	NLK,
../firstrun/newGeneCopies/NLK/NLK_partitions/NLK_group1.fasta	../firstrun/newGeneCopies/NLK/NLK_partitions/NLK_group1_NLKOOORPS29P22OOOVault.fasta	RPS29P22,Vault,NLK,
../firstrun/newGeneCopies/CCT8L2/CCT8L2_partitions/CCT8L2_group1.fasta	../firstrun/newGeneCopies/CCT8L2/CCT8L2_partitions/CCT8L2_group1_CCT8L2OOOCCT8L1POOOFABP5P11.fasta	CCT8L2,KB-67B5.18,FABP5P3,CCT8L1P,FABP5P11,
../firstrun/newGeneCopies/PPIP5K1/PPIP5K1_partitions/PPIP5K1_group1.fasta	../firstrun/newGeneCopies/PPIP5K1/PPIP5K1_partitions/PPIP5K1_group1_PPIP5K1OOOAC011330v5OOOCATSPER2.fasta	AC011330.5,CKMT1B,MAP1A,CKMT1A,CATSPER2,PPIP5K1,
../firstrun/newGeneCopies/APLF/APLF_partitions/APLF_group5.fasta	../firstrun/newGeneCopies/APLF/APLF_partitions/APLF_group5_APLFOOOPROKR1.fasta	PROKR1,APLF,
../firstrun/newGeneCopies/APLF/APLF_partitions/APLF_group4.fasta	../firstrun/newGeneCopies/APLF/APLF_partitions/APLF_group4_APLF.fasta	APLF,
../firstrun/newGeneCopies/APLF/APLF_partitions/APLF_group1.fasta	../firstrun/newGeneCopies/APLF/APLF_partitions/APLF_group1_APLFOOOAC130709v1OOOFBXO48.fasta	RP11-440J4.2,RP11-354I13.2,MTCO3P29,RP11-15B24.3,RP11-353M1.5,AC130709.1,MTND3P23,SPTLC1,RP11-15B24.5,MTCO3P40,FBXO48,TCHHL1,SPTLC1P2,SPTLC1P1,RP11-613H2.3,RP11-184C23.4,RP11-408O13.4,APLF,RP11-100G15.12,ZEB1,RP11-20P5.2,SPTLC1P4,SPTLC1P5,SPTLC1P3,RP11-613H2.1,MTND4LP7,NPAP1L,MTND4P15,MTATP6P29,RP11-192P3.5,RP11-457D20.1,LINGO2,
../firstrun/newGeneCopies/SPC25/SPC25_partitions/SPC25_group1.fasta	../firstrun/newGeneCopies/SPC25/SPC25_partitions/SPC25_group1_SPC25OOOG6PC2OOONOSTRIN.fasta	NOSTRIN,G6PC2,SPC25,
../firstrun/newGeneCopies/SPC25/SPC25_partitions/SPC25_group2.fasta	../firstrun/newGeneCopies/SPC25/SPC25_partitions/SPC25_group2_SPC25OOOABCB11OOOG6PC2.fasta	SPC25,G6PC2,ABCB11,
../firstrun/newGeneCopies/MYO15B/MYO15B_partitions/MYO15B_group1.fasta	../firstrun/newGeneCopies/MYO15B/MYO15B_partitions/MYO15B_group1_MYO15BOOORECQL5.fasta	RECQL5,MYO15B,
../firstrun/newGeneCopies/GNL3/GNL3_partitions/GNL3_group10.fasta	../firstrun/newGeneCopies/GNL3/GNL3_partitions/GNL3_group10_GNL3L.fasta	GNL3L,
../firstrun/newGeneCopies/GNL3/GNL3_partitions/GNL3_group1.fasta	../firstrun/newGeneCopies/GNL3/GNL3_partitions/GNL3_group1_GNL3OOOENSG10010138968v2OOOENSG10010139083v1.fasta	SNORD69,SNORD19,ENSG10010139083.1,ENSG10010138968.2,SNORD19C,PBRM1,GNL3,SNORD19B,GLT8D1,
../firstrun/newGeneCopies/HDAC3/HDAC3_partitions/HDAC3_group1.fasta	../firstrun/newGeneCopies/HDAC3/HDAC3_partitions/HDAC3_group1_HDAC3OOOAC008781v7OOODIAPH1.fasta	AC008781.7,HDAC3,RELL2,FCHSD1,DIAPH1,
../firstrun/newGeneCopies/SCGB1C/SCGB1C_partitions/SCGB1C_group6.fasta	../firstrun/newGeneCopies/SCGB1C/SCGB1C_partitions/SCGB1C_group6_SCGB1C1OOOSCGB1C2OOOBET1L.fasta	SCGB1C1,ODF3,DOC2B,SCGB1C2,BET1L,
../firstrun/newGeneCopies/PRKCZ/PRKCZ_partitions/PRKCZ_group1.fasta	../firstrun/newGeneCopies/PRKCZ/PRKCZ_partitions/PRKCZ_group1_PRKCZOOOPRKCZ-AS1OOOFAAP20.fasta	RP11-547D24.3,PRKCZ,RP5-892K4.1,FAAP20,PRKCZ-AS1,
../firstrun/newGeneCopies/ID1/ID1_partitions/ID1_group1.fasta	../firstrun/newGeneCopies/ID1/ID1_partitions/ID1_group1_ID1OOOMIR3193.fasta	ID1,MIR3193,
../firstrun/newGeneCopies/TMPRSS9/TMPRSS9_partitions/TMPRSS9_group1.fasta	../firstrun/newGeneCopies/TMPRSS9/TMPRSS9_partitions/TMPRSS9_group1_TMPRSS9OOOLMNB2OOOTIMM13.fasta	TMPRSS9,LMNB2,TIMM13,
../firstrun/newGeneCopies/PC/PC_partitions/PC_group1.fasta	../firstrun/newGeneCopies/PC/PC_partitions/PC_group1_PCOOOC11orf80OOOLRFN4.fasta	LRFN4,PC,MIR3163,C11orf80,RNU7-23P,RCE1,
../firstrun/newGeneCopies/NT5DC2/NT5DC2_partitions/NT5DC2_group1.fasta	../firstrun/newGeneCopies/NT5DC2/NT5DC2_partitions/NT5DC2_group1_NT5DC2OOOSMIM4OOOSTAB1.fasta	NT5DC2,SMIM4,STAB1,
../firstrun/newGeneCopies/CLDN23/CLDN23_partitions/CLDN23_group1.fasta	../firstrun/newGeneCopies/CLDN23/CLDN23_partitions/CLDN23_group1_CLDN23.fasta	CLDN23,
../firstrun/newGeneCopies/LRP2/LRP2_partitions/LRP2_group3.fasta	../firstrun/newGeneCopies/LRP2/LRP2_partitions/LRP2_group3_LRP2.fasta	LRP2,
../firstrun/newGeneCopies/UBR4/UBR4_partitions/UBR4_group1.fasta	../firstrun/newGeneCopies/UBR4/UBR4_partitions/UBR4_group1_UBR4OOOEMC1-AS1OOORP5-1126H10v2.fasta	RP5-1126H10.2,EMC1-AS1,UBR4,
../firstrun/newGeneCopies/GGT1/GGT1_partitions/GGT1_group1.fasta	../firstrun/newGeneCopies/GGT1/GGT1_partitions/GGT1_group1_GGT1OOOAP000347v2OOOAP000356v2.fasta	GGT4P,POM121L9P,GGT3P,GGTLC5P,GGTLC3,POM121L1P,GGT8P,KB-1995A5.6,POM121L3P,LRRC75B,FAM247B,GGT2,AP000347.2,GGT5,GGTLC2,AP000356.2,FAM247A,GGTLC4P,RP5-831C21.1,GGT1,GGTLC1,GUSBP11,
../firstrun/newGeneCopies/GDF10/GDF10_partitions/GDF10_group1.fasta	../firstrun/newGeneCopies/GDF10/GDF10_partitions/GDF10_group1_GDF10.fasta	GDF10,
../firstrun/newGeneCopies/ESRP2/ESRP2_partitions/ESRP2_group1.fasta	../firstrun/newGeneCopies/ESRP2/ESRP2_partitions/ESRP2_group1_ESRP2OOOMIR6773OOONFATC3.fasta	RP11-96D1.11,MIR6773,NFATC3,ESRP2,RP11-96D1.6,RP11-96D1.10,
../firstrun/newGeneCopies/HTR6/HTR6_partitions/HTR6_group1.fasta	../firstrun/newGeneCopies/HTR6/HTR6_partitions/HTR6_group1_HTR6OOOTMCO4.fasta	TMCO4,HTR6,
../firstrun/newGeneCopies/VWDE/VWDE_partitions/VWDE_group1.fasta	../firstrun/newGeneCopies/VWDE/VWDE_partitions/VWDE_group1_VWDE.fasta	VWDE,
../firstrun/newGeneCopies/GFOD2/GFOD2_partitions/GFOD2_group5.fasta	../firstrun/newGeneCopies/GFOD2/GFOD2_partitions/GFOD2_group5_GFOD2.fasta	GFOD2,
../firstrun/newGeneCopies/IFT43/IFT43_partitions/IFT43_group3.fasta	../firstrun/newGeneCopies/IFT43/IFT43_partitions/IFT43_group3_IFT43.fasta	IFT43,
../firstrun/newGeneCopies/IFT43/IFT43_partitions/IFT43_group2.fasta	../firstrun/newGeneCopies/IFT43/IFT43_partitions/IFT43_group2_IFT43.fasta	IFT43,
../firstrun/newGeneCopies/IFT43/IFT43_partitions/IFT43_group1.fasta	../firstrun/newGeneCopies/IFT43/IFT43_partitions/IFT43_group1_IFT43OOOTGFB3OOOTGFB3-AS1.fasta	TTLL5,IFT43,TGFB3,TGFB3-AS1,
../firstrun/newGeneCopies/ZNF565/ZNF565_partitions/ZNF565_group112.fasta	../firstrun/newGeneCopies/ZNF565/ZNF565_partitions/ZNF565_group112_ZNF565OOOY_RNAOOOZNF146.fasta	ZNF565,Y_RNA,ZNF146,
../firstrun/newGeneCopies/TMEM168/TMEM168_partitions/TMEM168_group1.fasta	../firstrun/newGeneCopies/TMEM168/TMEM168_partitions/TMEM168_group1_TMEM168OOOAC002463v3.fasta	AC002463.3,TMEM168,
../firstrun/newGeneCopies/TTC34/TTC34_partitions/TTC34_group2.fasta	../firstrun/newGeneCopies/TTC34/TTC34_partitions/TTC34_group2_TTC34OOOABC14-1188822O7v1OOOABC14-1188822O7v2.fasta	ABC14-1188822O7.2,ABC14-1188822O7.1,TTC34,
../firstrun/newGeneCopies/TTC34/TTC34_partitions/TTC34_group1.fasta	../firstrun/newGeneCopies/TTC34/TTC34_partitions/TTC34_group1_TTC34OOOMMEL1OOOMMEL1-AS1.fasta	MMEL1,MMEL1-AS1,TTC34,
../firstrun/newGeneCopies/BBS5/BBS5_partitions/BBS5_group1.fasta	../firstrun/newGeneCopies/BBS5/BBS5_partitions/BBS5_group1_BBS5OOORP11-724O16v1.fasta	RP11-724O16.1,BBS5,
../firstrun/newGeneCopies/EXOC3L1/EXOC3L1_partitions/EXOC3L1_group1.fasta	../firstrun/newGeneCopies/EXOC3L1/EXOC3L1_partitions/EXOC3L1_group1_EXOC3L1OOOE2F4OOOKIAA0895L.fasta	EXOC3L1,E2F4,KIAA0895L,
../firstrun/newGeneCopies/KPTN/KPTN_partitions/KPTN_group1.fasta	../firstrun/newGeneCopies/KPTN/KPTN_partitions/KPTN_group1_KPTNOOONAPA-AS1OOORP11-43N16v7.fasta	KPTN,RP11-43N16.7,NAPA-AS1,
../firstrun/newGeneCopies/GRM1/GRM1_partitions/GRM1_group6.fasta	../firstrun/newGeneCopies/GRM1/GRM1_partitions/GRM1_group6_GRM1.fasta	GRM1,
../firstrun/newGeneCopies/GRM1/GRM1_partitions/GRM1_group4.fasta	../firstrun/newGeneCopies/GRM1/GRM1_partitions/GRM1_group4_GRM1.fasta	GRM1,
../firstrun/newGeneCopies/GRM1/GRM1_partitions/GRM1_group5.fasta	../firstrun/newGeneCopies/GRM1/GRM1_partitions/GRM1_group5_GRM1.fasta	GRM1,
../firstrun/newGeneCopies/GRM1/GRM1_partitions/GRM1_group3.fasta	../firstrun/newGeneCopies/GRM1/GRM1_partitions/GRM1_group3_GRM1.fasta	GRM1,
../firstrun/newGeneCopies/GRM1/GRM1_partitions/GRM1_group1.fasta	../firstrun/newGeneCopies/GRM1/GRM1_partitions/GRM1_group1_GRM1OOOFUNDC2P3.fasta	GRM1,FUNDC2P3,
../firstrun/newGeneCopies/DRD4/DRD4_partitions/DRD4_group1.fasta	../firstrun/newGeneCopies/DRD4/DRD4_partitions/DRD4_group1_DRD4OOODEAF1.fasta	DRD4,DEAF1,
../firstrun/newGeneCopies/BTRC/BTRC_partitions/BTRC_group1.fasta	../firstrun/newGeneCopies/BTRC/BTRC_partitions/BTRC_group1_BTRCOOORNU2-59P.fasta	BTRC,RNU2-59P,
../firstrun/newGeneCopies/ARMC12/ARMC12_partitions/ARMC12_group1.fasta	../firstrun/newGeneCopies/ARMC12/ARMC12_partitions/ARMC12_group1_ARMC12OOORP3-510O8v4.fasta	ARMC12,RP3-510O8.4,
../firstrun/newGeneCopies/DDX53/DDX53_partitions/DDX53_group1.fasta	../firstrun/newGeneCopies/DDX53/DDX53_partitions/DDX53_group1_DDX53OOORP11-40F8v2.fasta	DDX53,RP11-40F8.2,
../firstrun/newGeneCopies/SKI/SKI_partitions/SKI_group2.fasta	../firstrun/newGeneCopies/SKI/SKI_partitions/SKI_group2_SKIOOORP11-181G12v4.fasta	SKI,RP11-181G12.4,
../firstrun/newGeneCopies/SKI/SKI_partitions/SKI_group8.fasta	../firstrun/newGeneCopies/SKI/SKI_partitions/SKI_group8_SKIV2LOOOCYP21A2OOODAQB-331I12v15.fasta	DAQB-331I12.15,NELFE,MIR1236,DXO,SKIV2L,STK19,CYP21A2,
../firstrun/newGeneCopies/PKD1/PKD1_partitions/PKD1_group0011201.fasta	../firstrun/newGeneCopies/PKD1/PKD1_partitions/PKD1_group0011201_PKD1OOOPKD1P1OOOPKD1P2.fasta	MIR3180-5,NPIPB13,NPIPB15,CH17-32G2.1,MIR6511A1,RP11-304L19.4,RAB26,MIR1225,RP11-252A24.8,RP11-304L19.2,RP11-419C5.3,NPIPA2,MIR6511A2,NPIPA1,CTD-2547E10.5,RP11-231C14.10,RP11-231C14.5,RP11-166B2.9,CTB-134H23.3,CH17-262H22.1,RP11-719K4.3,NPIPA5,NPIPB12,RP11-347C12.8,PKD1,RP11-72I8.2,RP11-719K4.6,NPIPB6,CH17-5A7.1,PKD1P3,MIR3180-4,NPIPA8,MIR3180-2,NPIPA9,MIR6770-3,RP11-645C24.6,RP11-677O4.6,TSC2,MIR3180-3,RP11-368J21.4,RP11-1212A22.9,RP11-1212A22.8,NPIPB8,MIR6511A3,RP11-680G24.7,MIR6511B2,MIR6770-1,RP11-57A19.6,RP11-304L19.1,MIR6511A4,NPIPB3,RP11-57A19.5,MIR3180-1,RP11-680G24.1,RP11-467M13.2,PKD1P4,NPIPB5,ENSG00000277983,NPIPB1P,RP11-1348G14.7,AC138969.4,RP11-435I10.6,RP11-435I10.4,NPIPB14P,NPIPA3,MIR4516,PKD1P6-NPIPP1,NPIPB11,RP11-304L19.3,PKD1P5,NPIPP1,ENSG00000283738,PKD1P6,SLC35G4,RP11-345J4.11,NPIPB7,RP11-72I8.1,Y_RNA,NPIPB4,NPIPA7,NPIPB2,RP11-958N24.4,RP11-82O18.2,PDXDC1,RP11-677O4.5,NPIPB9,PKD1P2,MIR6511B1,NPIPB10P,MIR6770-2,PDXDC2P-NPIPB14P,RP11-1212A22.7,RP11-231C14.8,RP11-57A19.4,PKD1P1,RP11-296I10.5,
../firstrun/newGeneCopies/RCN1/RCN1_partitions/RCN1_group2.fasta	../firstrun/newGeneCopies/RCN1/RCN1_partitions/RCN1_group2_RCN1OOORCN1P2OOORP1-65P5v3.fasta	SLC25A30,RCN1P2,RP1-65P5.3,RP1-65P5.6,RCN1,TPT1-AS1,
../firstrun/newGeneCopies/HILPDA/HILPDA_partitions/HILPDA_group1.fasta	../firstrun/newGeneCopies/HILPDA/HILPDA_partitions/HILPDA_group1_HILPDAOOORP11-155G14v6OOORP11-212P7v3.fasta	RP11-155G14.6,HILPDA,RP11-212P7.3,
../firstrun/newGeneCopies/THEM4/THEM4_partitions/THEM4_group3.fasta	../firstrun/newGeneCopies/THEM4/THEM4_partitions/THEM4_group3_THEM4OOORP11-139D23v7.fasta	THEM4,RP11-139D23.7,
../firstrun/newGeneCopies/SERPINF2/SERPINF2_partitions/SERPINF2_group1.fasta	../firstrun/newGeneCopies/SERPINF2/SERPINF2_partitions/SERPINF2_group1_SERPINF2.fasta	SERPINF2,
../firstrun/newGeneCopies/ZNF263/ZNF263_partitions/ZNF263_group1.fasta	../firstrun/newGeneCopies/ZNF263/ZNF263_partitions/ZNF263_group1_ZNF263OOOAJ003147v11OOOLA16c-360H6v1.fasta	TIGD7,LA16c-360H6.1,AJ003147.11,LINC00921,ZNF263,
../firstrun/newGeneCopies/NDUFAF1/NDUFAF1_partitions/NDUFAF1_group1.fasta	../firstrun/newGeneCopies/NDUFAF1/NDUFAF1_partitions/NDUFAF1_group1_NDUFAF1OOORTF1.fasta	RTF1,NDUFAF1,
../firstrun/newGeneCopies/HM13/HM13_partitions/HM13_group1.fasta	../firstrun/newGeneCopies/HM13/HM13_partitions/HM13_group1_HM13OOOHM13-AS1OOOHM13-IT1.fasta	MCTS2P,HM13,RP3-324O17.7,RP3-324O17.8,HM13-AS1,HM13-IT1,
../firstrun/newGeneCopies/ANAPC5/ANAPC5_partitions/ANAPC5_group1.fasta	../firstrun/newGeneCopies/ANAPC5/ANAPC5_partitions/ANAPC5_group1_ANAPC5OOORNF34OOORP11-711D18v2.fasta	ANAPC5,RP11-711D18.2,RNF34,
../firstrun/newGeneCopies/RPS3A/RPS3A_partitions/RPS3A_group18.fasta	../firstrun/newGeneCopies/RPS3A/RPS3A_partitions/RPS3A_group18_RPS3AOOORPS3AP26OOORPS3AP6.fasta	RPS3AP26,RPS3A,SNORD73A,RPS3AP6,SNORD73B,SH3D19,BAIAP2L1,
../firstrun/newGeneCopies/ZNF117/ZNF117_partitions/ZNF117_group1.fasta	../firstrun/newGeneCopies/ZNF117/ZNF117_partitions/ZNF117_group1_ZNF117OOOERV3-1OOORP11-479O9v4.fasta	ZNF117,ERV3-1,RP11-479O9.4,
../firstrun/newGeneCopies/RCC1L/RCC1L_partitions/RCC1L_group1.fasta	../firstrun/newGeneCopies/RCC1L/RCC1L_partitions/RCC1L_group1_RCC1LOOOCASTOR2OOOMetazoa_SRP.fasta	RCC1L,STAG3L2,CASTOR2,Metazoa_SRP,
../firstrun/newGeneCopies/LMF1/LMF1_partitions/LMF1_group1.fasta	../firstrun/newGeneCopies/LMF1/LMF1_partitions/LMF1_group1_LMF1OOOLMF1-AS1OOOCEROX1.fasta	LA16c-360B4.2,LA16c-306A4.1,LA16c-306A4.2,LMF1,RP11-161M6.6,SOX8,CEROX1,LMF1-AS1,
../firstrun/newGeneCopies/MUC3A/MUC3A_partitions/MUC3A_group1.fasta	../firstrun/newGeneCopies/MUC3A/MUC3A_partitions/MUC3A_group1_MUC3AOOOMUC12OOORP11-395B7v2.fasta	MUC12,RP11-395B7.2,MUC3A,
../firstrun/newGeneCopies/PTPN11/PTPN11_partitions/PTPN11_group8.fasta	../firstrun/newGeneCopies/PTPN11/PTPN11_partitions/PTPN11_group8_PTPN11OOORPL6.fasta	RPL6,PTPN11,
../firstrun/newGeneCopies/PTPN11/PTPN11_partitions/PTPN11_group3.fasta	../firstrun/newGeneCopies/PTPN11/PTPN11_partitions/PTPN11_group3_PTPN11OOOCTD-2272G21v2OOORP11-114M5v1.fasta	RP11-114M5.1,UBXN2B,PTPN11,CTD-2272G21.2,Y_RNA,
../firstrun/newGeneCopies/ABCG8/ABCG8_partitions/ABCG8_group1.fasta	../firstrun/newGeneCopies/ABCG8/ABCG8_partitions/ABCG8_group1_ABCG8OOOABCG5.fasta	ABCG8,ABCG5,
../firstrun/newGeneCopies/COX4I2/COX4I2_partitions/COX4I2_group1.fasta	../firstrun/newGeneCopies/COX4I2/COX4I2_partitions/COX4I2_group1_COX4I2.fasta	COX4I2,
../firstrun/newGeneCopies/FZD2/FZD2_partitions/FZD2_group1.fasta	../firstrun/newGeneCopies/FZD2/FZD2_partitions/FZD2_group1_FZD2.fasta	FZD2,
../firstrun/newGeneCopies/SNAI1/SNAI1_partitions/SNAI1_group2.fasta	../firstrun/newGeneCopies/SNAI1/SNAI1_partitions/SNAI1_group2_SNAI1.fasta	SNAI1,
../firstrun/newGeneCopies/CT47B1/CT47B1_partitions/CT47B1_group1.fasta	../firstrun/newGeneCopies/CT47B1/CT47B1_partitions/CT47B1_group1_CT47B1OOOCT47A1OOOCT47A10.fasta	CT47A12,PA2G4P1,CT47A7,RP6-166C19.14,CT47A1,RP6-166C19.23,CT47A4,CT47A11,CT47A6,RP6-166C19.15,RP6-166C19.16,RP6-166C19.22,CT47A8,RP6-166C19.20,RP6-166C19.12,CT47A3,RP6-166C19.18,RP6-166C19.19,RP1-321E8.4,CT47A9,RP6-166C19.21,CT47B1,RP1-321E8.5,CT47A2,RP6-166C19.13,CT47A5,RP6-166C19.17,CT47A10,
../firstrun/newGeneCopies/RXRA/RXRA_partitions/RXRA_group1.fasta	../firstrun/newGeneCopies/RXRA/RXRA_partitions/RXRA_group1_RXRAOOOMIR4669.fasta	RXRA,MIR4669,
../firstrun/newGeneCopies/ZNF469/ZNF469_partitions/ZNF469_group1.fasta	../firstrun/newGeneCopies/ZNF469/ZNF469_partitions/ZNF469_group1_ZNF469.fasta	ZNF469,
../firstrun/newGeneCopies/RSPH10B/RSPH10B_partitions/RSPH10B_group1.fasta	../firstrun/newGeneCopies/RSPH10B/RSPH10B_partitions/RSPH10B_group1_RSPH10BOOORSPH10B2OOOCCZ1.fasta	PMS2,CCZ1,RSPH10B2,RSPH10B,PMS2CL,CCZ1B,
../firstrun/newGeneCopies/TCF3/TCF3_partitions/TCF3_group2.fasta	../firstrun/newGeneCopies/TCF3/TCF3_partitions/TCF3_group2_TCF3OOOAC005943v2OOORNU6-1223P.fasta	UQCR11,RNU6-1223P,AC005943.2,TCF3,
../firstrun/newGeneCopies/RAB12/RAB12_partitions/RAB12_group1.fasta	../firstrun/newGeneCopies/RAB12/RAB12_partitions/RAB12_group1_RAB12.fasta	RAB12,
../firstrun/newGeneCopies/RAB12/RAB12_partitions/RAB12_group2.fasta	../firstrun/newGeneCopies/RAB12/RAB12_partitions/RAB12_group2_RAB12OOORP11-661O13v1.fasta	RAB12,RP11-661O13.1,
../firstrun/newGeneCopies/ZNF324/ZNF324_partitions/ZNF324_group1.fasta	../firstrun/newGeneCopies/ZNF324/ZNF324_partitions/ZNF324_group1_ZNF324OOOZNF324BOOOCTD-2619J13v23.fasta	ZNF446,SLC27A5,RNU6-1337P,CTD-2619J13.23,ZNF324B,ZNF324,
../firstrun/newGeneCopies/TMEM150/TMEM150_partitions/TMEM150_group4.fasta	../firstrun/newGeneCopies/TMEM150/TMEM150_partitions/TMEM150_group4_TMEM150BOOOBRSK1OOOCTD-2105E13v14.fasta	CTD-2105E13.14,BRSK1,TMEM150B,
../firstrun/newGeneCopies/MITD1/MITD1_partitions/MITD1_group1.fasta	../firstrun/newGeneCopies/MITD1/MITD1_partitions/MITD1_group1_MITD1OOOLIPT1OOOMRPL30.fasta	RP11-38C17.1,RP11-111H13.1,LIPT1,MITD1,MRPL30,
../firstrun/newGeneCopies/ZNF461/ZNF461_partitions/ZNF461_group1.fasta	../firstrun/newGeneCopies/ZNF461/ZNF461_partitions/ZNF461_group1_ZNF461OOOCTD-3234P18v6OOOZNF382.fasta	ZNF382,CTD-3234P18.6,ZNF461,
../firstrun/newGeneCopies/EFCAB/EFCAB_partitions/EFCAB_group37.fasta	../firstrun/newGeneCopies/EFCAB/EFCAB_partitions/EFCAB_group37_EFCAB8OOORP5-1085F17v3OOORP5-1085F17v4.fasta	EFCAB8,RP5-1085F17.3,RP5-1085F17.4,
../firstrun/newGeneCopies/IGHA1/IGHA1_partitions/IGHA1_group1.fasta	../firstrun/newGeneCopies/IGHA1/IGHA1_partitions/IGHA1_group1_IGHA1OOOAL928768v3OOOIGHA2.fasta	IGHA1,IGHA2,AL928768.3,
../firstrun/newGeneCopies/NAPA/NAPA_partitions/NAPA_group1.fasta	../firstrun/newGeneCopies/NAPA/NAPA_partitions/NAPA_group1_NAPAOOONAPA-AS1OOOKPTN.fasta	NAPA,NAPA-AS1,RP11-43N16.4,KPTN,
../firstrun/newGeneCopies/IGHG2/IGHG2_partitions/IGHG2_group1.fasta	../firstrun/newGeneCopies/IGHG2/IGHG2_partitions/IGHG2_group1_IGHG2OOOCOPDA1OOOELK2AP.fasta	MIR8071-2,ELK2AP,IGHG4,MIR8071-1,IGHG2,IGHG1,IGHG3,COPDA1,IGHGP,
../firstrun/newGeneCopies/BUD23/BUD23_partitions/BUD23_group1.fasta	../firstrun/newGeneCopies/BUD23/BUD23_partitions/BUD23_group1_BUD23OOODNAJC30OOOSTX1A.fasta	BUD23,DNAJC30,STX1A,
../firstrun/newGeneCopies/SORD/SORD_partitions/SORD_group4.fasta	../firstrun/newGeneCopies/SORD/SORD_partitions/SORD_group4_SORDOOOSORD2POOOCTD-2008A1v1.fasta	RP11-109D20.1,SORD2P,RNU1-78P,U1,RNU1-119P,SORD,RP11-109D20.2,Y_RNA,CTD-2008A1.1,
../firstrun/newGeneCopies/CYSRT1/CYSRT1_partitions/CYSRT1_group1.fasta	../firstrun/newGeneCopies/CYSRT1/CYSRT1_partitions/CYSRT1_group1_CYSRT1OOONDOR1OOORNF208.fasta	NDOR1,RP13-122B23.13,SLC34A3,RNF224,RNF208,CYSRT1,
../firstrun/newGeneCopies/NOTCH/NOTCH_partitions/NOTCH_group34.fasta	../firstrun/newGeneCopies/NOTCH/NOTCH_partitions/NOTCH_group34_NOTCH3OOOMIR6795.fasta	NOTCH3,MIR6795,
../firstrun/newGeneCopies/NOTCH/NOTCH_partitions/NOTCH_group1.fasta	../firstrun/newGeneCopies/NOTCH/NOTCH_partitions/NOTCH_group1_NOTCH2OOONOTCH2NLAOOONOTCH2NLB.fasta	AL359752.1,NBPF26,AC239799.1,NOTCH2NLA,NOTCH2NLB,NBPF19,NBPF14,NBPF10,CH17-159N18.5,NOTCH2NLR,NOTCH2,NOTCH2NLC,NBPF1,CH17-353B19.1,ENSG00000271254,NBPF25P,
../firstrun/newGeneCopies/NOTCH/NOTCH_partitions/NOTCH_group6.fasta	../firstrun/newGeneCopies/NOTCH/NOTCH_partitions/NOTCH_group6_NOTCH2P1.fasta	NOTCH2P1,
../firstrun/newGeneCopies/NOTCH/NOTCH_partitions/NOTCH_group31.fasta	../firstrun/newGeneCopies/NOTCH/NOTCH_partitions/NOTCH_group31_NOTCH4OOOGPSM3.fasta	GPSM3,NOTCH4,
../firstrun/newGeneCopies/NOTCH/NOTCH_partitions/NOTCH_group32.fasta	../firstrun/newGeneCopies/NOTCH/NOTCH_partitions/NOTCH_group32_NOTCH1OOOMIR4673OOOMIR4674.fasta	MIR4674,RP11-413M3.4,NOTCH1,MIR4673,NALT1,
../firstrun/newGeneCopies/ZNF720/ZNF720_partitions/ZNF720_group1.fasta	../firstrun/newGeneCopies/ZNF720/ZNF720_partitions/ZNF720_group1_ZNF720OOOZNF720P1OOOAC002519v8.fasta	ZNF720P1,YBX3P1,FRG2KP,AC002519.8,CTD-2014E2.7,CTD-2358C21.4,CLUHP3,ZNF720,
../firstrun/newGeneCopies/GALNT13/GALNT13_partitions/GALNT13_group9.fasta	../firstrun/newGeneCopies/GALNT13/GALNT13_partitions/GALNT13_group9_GALNT13.fasta	GALNT13,
../firstrun/newGeneCopies/GALNT13/GALNT13_partitions/GALNT13_group5.fasta	../firstrun/newGeneCopies/GALNT13/GALNT13_partitions/GALNT13_group5_GALNT13.fasta	GALNT13,
../firstrun/newGeneCopies/GALNT13/GALNT13_partitions/GALNT13_group11.fasta	../firstrun/newGeneCopies/GALNT13/GALNT13_partitions/GALNT13_group11_GALNT13OOOAC009227v2.fasta	GALNT13,AC009227.2,
../firstrun/newGeneCopies/GALNT13/GALNT13_partitions/GALNT13_group6.fasta	../firstrun/newGeneCopies/GALNT13/GALNT13_partitions/GALNT13_group6_GALNT13.fasta	GALNT13,
../firstrun/newGeneCopies/ADGRG6/ADGRG6_partitions/ADGRG6_group1.fasta	../firstrun/newGeneCopies/ADGRG6/ADGRG6_partitions/ADGRG6_group1_ADGRG6.fasta	ADGRG6,
../firstrun/newGeneCopies/ADGRG6/ADGRG6_partitions/ADGRG6_group3.fasta	../firstrun/newGeneCopies/ADGRG6/ADGRG6_partitions/ADGRG6_group3_ADGRG6.fasta	ADGRG6,
../firstrun/newGeneCopies/RPS12/RPS12_partitions/RPS12_group7.fasta	../firstrun/newGeneCopies/RPS12/RPS12_partitions/RPS12_group7_RPS12OOOSLC18B1OOOSNORA33.fasta	RPS12,SLC18B1,SNORD101,SNORA33,SNORD100,
../firstrun/newGeneCopies/NFAM1/NFAM1_partitions/NFAM1_group1.fasta	../firstrun/newGeneCopies/NFAM1/NFAM1_partitions/NFAM1_group1_NFAM1.fasta	NFAM1,
../firstrun/newGeneCopies/NFAM1/NFAM1_partitions/NFAM1_group3.fasta	../firstrun/newGeneCopies/NFAM1/NFAM1_partitions/NFAM1_group3_NFAM1OOOCTA-126B4v7.fasta	NFAM1,CTA-126B4.7,
../firstrun/newGeneCopies/NFAM1/NFAM1_partitions/NFAM1_group2.fasta	../firstrun/newGeneCopies/NFAM1/NFAM1_partitions/NFAM1_group2_NFAM1.fasta	NFAM1,
../firstrun/newGeneCopies/CFL1/CFL1_partitions/CFL1_group8.fasta	../firstrun/newGeneCopies/CFL1/CFL1_partitions/CFL1_group8_CFL1OOOMUS81OOOSNX32.fasta	MUS81,SNX32,CFL1,
../firstrun/newGeneCopies/OR1/OR1_partitions/OR1_group43.fasta	../firstrun/newGeneCopies/OR1/OR1_partitions/OR1_group43_OR1I1.fasta	OR1I1,
../firstrun/newGeneCopies/OR1/OR1_partitions/OR1_group40.fasta	../firstrun/newGeneCopies/OR1/OR1_partitions/OR1_group40_OR1AC1POOOOR1E1OOOOR1E2.fasta	OR1AC1P,RP11-147K16.3,OR3A2,OR1R1P,SPATA22,OR1E2,OR1E1,
../firstrun/newGeneCopies/OR1/OR1_partitions/OR1_group32.fasta	../firstrun/newGeneCopies/OR1/OR1_partitions/OR1_group32_OR1A1OOOOR1A2OOOOR1D4.fasta	OR1D5,OR1A1,OR1A2,OR1D4,
../firstrun/newGeneCopies/OR1/OR1_partitions/OR1_group31.fasta	../firstrun/newGeneCopies/OR1/OR1_partitions/OR1_group31_OR1F1OOOOR1F2POOOAJ003147v9.fasta	AJ003147.9,OR1F1,OR1F2P,
../firstrun/newGeneCopies/FAM72/FAM72_partitions/FAM72_group1.fasta	../firstrun/newGeneCopies/FAM72/FAM72_partitions/FAM72_group1_FAM72AOOOFAM72BOOOFAM72C.fasta	FAM72A,FAM72B,FAM72C,SRGAP2D,FAM72D,SRGAP2B,SRGAP2C,SRGAP2,
../firstrun/newGeneCopies/PKP2/PKP2_partitions/PKP2_group1.fasta	../firstrun/newGeneCopies/PKP2/PKP2_partitions/PKP2_group1_PKP2OOORP1-102E24v6OOORP11-8P13v5.fasta	RPL35AP27,PKP2,RP11-8P13.5,RP1-102E24.6,
../firstrun/newGeneCopies/SLC16A8/SLC16A8_partitions/SLC16A8_group1.fasta	../firstrun/newGeneCopies/SLC16A8/SLC16A8_partitions/SLC16A8_group1_SLC16A8OOOBAIAP2L2OOOPICK1.fasta	SLC16A8,RP5-1039K5.13,BAIAP2L2,PICK1,
../firstrun/newGeneCopies/FTCD/FTCD_partitions/FTCD_group4.fasta	../firstrun/newGeneCopies/FTCD/FTCD_partitions/FTCD_group4_FTCDOOOFTCD-AS1OOOSPATC1L.fasta	SPATC1L,FTCD-AS1,FTCD,
../firstrun/newGeneCopies/CYP2A/CYP2A_partitions/CYP2A_group3.fasta	../firstrun/newGeneCopies/CYP2A/CYP2A_partitions/CYP2A_group3_CYP2A13OOOCYP2A6OOOCYP2A7.fasta	CTC-490E21.11,CYP2A13,CYP2A6,CYP2A7P1,CTC-490E21.12,CYP2A7,
../firstrun/newGeneCopies/STING1/STING1_partitions/STING1_group1.fasta	../firstrun/newGeneCopies/STING1/STING1_partitions/STING1_group1_STING1OOOSMIM33.fasta	STING1,SMIM33,
../firstrun/newGeneCopies/C15orf39/C15orf39_partitions/C15orf39_group1.fasta	../firstrun/newGeneCopies/C15orf39/C15orf39_partitions/C15orf39_group1_C15orf39OOORP11-69H7v3.fasta	C15orf39,RP11-69H7.3,
../firstrun/newGeneCopies/ZBTB45/ZBTB45_partitions/ZBTB45_group3.fasta	../firstrun/newGeneCopies/ZBTB45/ZBTB45_partitions/ZBTB45_group3_ZBTB45OOOSLC27A5.fasta	ZBTB45,SLC27A5,
../firstrun/newGeneCopies/TIGD3/TIGD3_partitions/TIGD3_group1.fasta	../firstrun/newGeneCopies/TIGD3/TIGD3_partitions/TIGD3_group1_TIGD3OOODPF2.fasta	TIGD3,DPF2,
../firstrun/newGeneCopies/PRXL/PRXL_partitions/PRXL_group1.fasta	../firstrun/newGeneCopies/PRXL/PRXL_partitions/PRXL_group1_PRXL2BOOOMMEL1OOORP3-395M20v9.fasta	MMEL1,PRXL2B,RP3-395M20.9,
../firstrun/newGeneCopies/SSRP1/SSRP1_partitions/SSRP1_group1.fasta	../firstrun/newGeneCopies/SSRP1/SSRP1_partitions/SSRP1_group1_SSRP1OOOP2RX3OOORP11-872D17v4.fasta	P2RX3,SSRP1,TNKS1BP1,RP11-872D17.4,
../firstrun/newGeneCopies/AMER3/AMER3_partitions/AMER3_group1.fasta	../firstrun/newGeneCopies/AMER3/AMER3_partitions/AMER3_group1_AMER3OOOAC140481v8.fasta	AMER3,AC140481.8,
../firstrun/newGeneCopies/STPG3/STPG3_partitions/STPG3_group1.fasta	../firstrun/newGeneCopies/STPG3/STPG3_partitions/STPG3_group1_STPG3OOOSTPG3-AS1OOOFAM166A.fasta	NELFB,STPG3,FAM166A,STPG3-AS1,
../firstrun/newGeneCopies/VCX/VCX_partitions/VCX_group1.fasta	../firstrun/newGeneCopies/VCX/VCX_partitions/VCX_group1_VCXOOOVCX2OOOVCX3A.fasta	VCX,VCY,VCX3B,RP11-692P14.1,VCY1B,VCX3A,VCX2,
../firstrun/newGeneCopies/CACNA1B/CACNA1B_partitions/CACNA1B_group1.fasta	../firstrun/newGeneCopies/CACNA1B/CACNA1B_partitions/CACNA1B_group1_CACNA1BOOORP11-188C12v3.fasta	RP11-188C12.3,CACNA1B,
../firstrun/newGeneCopies/CACNA1B/CACNA1B_partitions/CACNA1B_group5.fasta	../firstrun/newGeneCopies/CACNA1B/CACNA1B_partitions/CACNA1B_group5_CACNA1BOOORP11-683L23v6.fasta	RP11-683L23.6,CACNA1B,
../firstrun/newGeneCopies/CACNA1B/CACNA1B_partitions/CACNA1B_group4.fasta	../firstrun/newGeneCopies/CACNA1B/CACNA1B_partitions/CACNA1B_group4_CACNA1B.fasta	CACNA1B,
../firstrun/newGeneCopies/RBM4/RBM4_partitions/RBM4_group3.fasta	../firstrun/newGeneCopies/RBM4/RBM4_partitions/RBM4_group3_RBM14-RBM4OOORBM4OOORBM4B.fasta	RBM4,SPTBN2,RBM4B,RBM14-RBM4,
../firstrun/newGeneCopies/GYPA/GYPA_partitions/GYPA_group1.fasta	../firstrun/newGeneCopies/GYPA/GYPA_partitions/GYPA_group1_GYPAOOOGYPBOOOGYPE.fasta	GYPB,GYPA,RP11-673E1.1,RP11-1289C17.1,RP11-673E1.5,GYPE,
../firstrun/newGeneCopies/MRPL51/MRPL51_partitions/MRPL51_group1.fasta	../firstrun/newGeneCopies/MRPL51/MRPL51_partitions/MRPL51_group1_MRPL51OOONCAPD2.fasta	NCAPD2,MRPL51,
../firstrun/newGeneCopies/CDH3/CDH3_partitions/CDH3_group1.fasta	../firstrun/newGeneCopies/CDH3/CDH3_partitions/CDH3_group1_CDH3OOOCDH1OOOHSPE1P5.fasta	HSPE1P5,CDH1,RP11-615I2.2,CDH3,RP11-615I2.3,
../firstrun/newGeneCopies/PEF1/PEF1_partitions/PEF1_group1.fasta	../firstrun/newGeneCopies/PEF1/PEF1_partitions/PEF1_group1_PEF1OOOPEF1-AS1OOOCOL16A1.fasta	HCRTR1,COL16A1,PEF1-AS1,RP11-73M7.9,PEF1,
../firstrun/newGeneCopies/RSC1A1/RSC1A1_partitions/RSC1A1_group1.fasta	../firstrun/newGeneCopies/RSC1A1/RSC1A1_partitions/RSC1A1_group1_RSC1A1OOODDI2.fasta	RSC1A1,DDI2,
../firstrun/newGeneCopies/HLA-U/HLA-U_partitions/HLA-U_group1.fasta	../firstrun/newGeneCopies/HLA-U/HLA-U_partitions/HLA-U_group1_HLA-UOOOHCG4P5OOOHCG4P7.fasta	HLA-U,HLA-A,HCG4P7,MICF,HLA-H,HCG4P5,
../firstrun/newGeneCopies/HP/HP_partitions/HP_group51.fasta	../firstrun/newGeneCopies/HP/HP_partitions/HP_group51_HPS1OOOHPSE2OOOMIR4685.fasta	PYROXD2,MIR4685,HPS1,HPSE2,RP11-439D8.4,
../firstrun/newGeneCopies/HP/HP_partitions/HP_group71.fasta	../firstrun/newGeneCopies/HP/HP_partitions/HP_group71_HPOOOHPROOORP11-384M15v3.fasta	RP11-384M15.3,HPR,TXNL4B,HP,
../firstrun/newGeneCopies/HP/HP_partitions/HP_group65.fasta	../firstrun/newGeneCopies/HP/HP_partitions/HP_group65_HPDOOORP11-7M8v2.fasta	HPD,RP11-7M8.2,
../firstrun/newGeneCopies/HP/HP_partitions/HP_group52.fasta	../firstrun/newGeneCopies/HP/HP_partitions/HP_group52_HPSE2.fasta	HPSE2,
../firstrun/newGeneCopies/HP/HP_partitions/HP_group55.fasta	../firstrun/newGeneCopies/HP/HP_partitions/HP_group55_HPSE2OOOARL5AP2OOOMIR6507.fasta	HPSE2,RPL7P36,MIR6507,ARL5AP2,
../firstrun/newGeneCopies/HP/HP_partitions/HP_group54.fasta	../firstrun/newGeneCopies/HP/HP_partitions/HP_group54_HPSE2.fasta	HPSE2,
../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group6.fasta	../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group6_GABRG3.fasta	GABRG3,
../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group7.fasta	../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group7_GABRG3OOOAC144833v1OOORP11-100M12v2.fasta	AC144833.1,GABRG3,RP11-100M12.3,RP11-100M12.2,
../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group4.fasta	../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group4_GABRG3OOOGABRG3-AS1.fasta	GABRG3,GABRG3-AS1,
../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group5.fasta	../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group5_GABRG3OOORNA5SP391.fasta	GABRG3,RNA5SP391,
../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group3.fasta	../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group3_GABRG3OOOGABRG3-AS1.fasta	GABRG3,GABRG3-AS1,
../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group1.fasta	../firstrun/newGeneCopies/GABRG3/GABRG3_partitions/GABRG3_group1_GABRG3OOOGABRG3-AS1OOOTVP23BP1.fasta	TVP23BP1,GABRG3,GABRG3-AS1,
../firstrun/newGeneCopies/DHH/DHH_partitions/DHH_group1.fasta	../firstrun/newGeneCopies/DHH/DHH_partitions/DHH_group1_DHHOOOLMBR1LOOORP11-386G11v8.fasta	RP11-386G11.8,DHH,LMBR1L,
../firstrun/newGeneCopies/SIRT3/SIRT3_partitions/SIRT3_group1.fasta	../firstrun/newGeneCopies/SIRT3/SIRT3_partitions/SIRT3_group1_SIRT3OOOPSMD13OOORIC8A.fasta	RIC8A,PSMD13,SIRT3,
../firstrun/newGeneCopies/TMEM129/TMEM129_partitions/TMEM129_group1.fasta	../firstrun/newGeneCopies/TMEM129/TMEM129_partitions/TMEM129_group1_TMEM129OOOSLBPOOOSLBP-DT.fasta	SLBP,TMEM129,TACC3,SLBP-DT,
../firstrun/newGeneCopies/TMEM210/TMEM210_partitions/TMEM210_group1.fasta	../firstrun/newGeneCopies/TMEM210/TMEM210_partitions/TMEM210_group1_TMEM210OOOANAPC2OOOGRIN1.fasta	RP11-350O14.18,ANAPC2,MIR3621,LRRC26,TMEM210,GRIN1,
../firstrun/newGeneCopies/SNRNP27/SNRNP27_partitions/SNRNP27_group1.fasta	../firstrun/newGeneCopies/SNRNP27/SNRNP27_partitions/SNRNP27_group1_SNRNP27OOOMXD1.fasta	SNRNP27,MXD1,
../firstrun/newGeneCopies/KLC2/KLC2_partitions/KLC2_group1.fasta	../firstrun/newGeneCopies/KLC2/KLC2_partitions/KLC2_group1_KLC2OOORAB1BOOORP11-755F10v3.fasta	RAB1B,RP11-755F10.3,RP11-867G23.2,RP11-867G23.1,KLC2,RP11-867G23.3,
../firstrun/newGeneCopies/DECR2/DECR2_partitions/DECR2_group1.fasta	../firstrun/newGeneCopies/DECR2/DECR2_partitions/DECR2_group1_DECR2OOONME4.fasta	DECR2,NME4,
../firstrun/newGeneCopies/NFATC2IP/NFATC2IP_partitions/NFATC2IP_group1.fasta	../firstrun/newGeneCopies/NFATC2IP/NFATC2IP_partitions/NFATC2IP_group1_NFATC2IPOOOMIR4517OOORP11-231C14v10.fasta	NFATC2IP,RP11-264B17.2,MIR4517,RP11-231C14.10,
../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group7.fasta	../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group7_PACRGOOORP1-257A15v2.fasta	RP1-257A15.2,PACRG,
../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group6.fasta	../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group6_PACRGOOOPACRG-AS2.fasta	PACRG-AS2,PACRG,
../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group9.fasta	../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group9_PACRGOOOPACRG-AS1.fasta	PACRG,PACRG-AS1,
../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group8.fasta	../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group8_PACRGOOOPACRG-AS3OOORP1-257A15v2.fasta	RP1-257A15.2,PACRG,PACRG-AS3,
../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group4.fasta	../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group4_PACRGOOORP11-157L10v1OOORP11-157L10v2.fasta	RP11-157L10.2,PACRG,RP11-157L10.1,
../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group2.fasta	../firstrun/newGeneCopies/PACRG/PACRG_partitions/PACRG_group2_PACRGOOOPRKN.fasta	PRKN,PACRG,
../firstrun/newGeneCopies/DEF6/DEF6_partitions/DEF6_group1.fasta	../firstrun/newGeneCopies/DEF6/DEF6_partitions/DEF6_group1_DEF6OOOZNF76.fasta	ZNF76,DEF6,
../firstrun/newGeneCopies/HBM/HBM_partitions/HBM_group1.fasta	../firstrun/newGeneCopies/HBM/HBM_partitions/HBM_group1_HBMOOOHBAP1OOOHBZ.fasta	HBM,HBZ,HBAP1,HBZP1,
../firstrun/newGeneCopies/HLA-N/HLA-N_partitions/HLA-N_group1.fasta	../firstrun/newGeneCopies/HLA-N/HLA-N_partitions/HLA-N_group1_HLA-NOOORPP21OOOTRIM39-RPP21.fasta	RPP21,TRIM39-RPP21,HLA-N,
../firstrun/newGeneCopies/PLA2G15/PLA2G15_partitions/PLA2G15_group1.fasta	../firstrun/newGeneCopies/PLA2G15/PLA2G15_partitions/PLA2G15_group1_PLA2G15OOORP11-96D1v7.fasta	PLA2G15,RP11-96D1.7,
../firstrun/newGeneCopies/DSPP/DSPP_partitions/DSPP_group1.fasta	../firstrun/newGeneCopies/DSPP/DSPP_partitions/DSPP_group1_DSPPOOORP11-742B18v1.fasta	RP11-742B18.1,DSPP,
../firstrun/newGeneCopies/PPDPF/PPDPF_partitions/PPDPF_group2.fasta	../firstrun/newGeneCopies/PPDPF/PPDPF_partitions/PPDPF_group2_PPDPFOOOPTK6.fasta	PTK6,PPDPF,
../firstrun/newGeneCopies/DCTD/DCTD_partitions/DCTD_group1.fasta	../firstrun/newGeneCopies/DCTD/DCTD_partitions/DCTD_group1_DCTD.fasta	DCTD,
../firstrun/newGeneCopies/CLCN7/CLCN7_partitions/CLCN7_group1.fasta	../firstrun/newGeneCopies/CLCN7/CLCN7_partitions/CLCN7_group1_CLCN7OOOCCDC154OOOLA16c-390E6v3.fasta	RPS3AP2,LA16c-390E6.4,LA16c-390E6.3,LA16c-390E6.5,CLCN7,CCDC154,
../firstrun/newGeneCopies/ZNF541/ZNF541_partitions/ZNF541_group1.fasta	../firstrun/newGeneCopies/ZNF541/ZNF541_partitions/ZNF541_group1_ZNF541.fasta	ZNF541,
../firstrun/newGeneCopies/ERV3/ERV3_partitions/ERV3_group1.fasta	../firstrun/newGeneCopies/ERV3/ERV3_partitions/ERV3_group1_ERV3-1OOORP11-479O9v4OOOZNF117.fasta	RP11-479O9.4,ERV3-1,ZNF117,
../firstrun/newGeneCopies/DENND2B/DENND2B_partitions/DENND2B_group1.fasta	../firstrun/newGeneCopies/DENND2B/DENND2B_partitions/DENND2B_group1_DENND2BOOORNA5SP330OOORP11-152H18v3.fasta	RP11-318C2.1,RP11-152H18.3,DENND2B,RNA5SP330,RPL27A,
../firstrun/newGeneCopies/DENND2B/DENND2B_partitions/DENND2B_group3.fasta	../firstrun/newGeneCopies/DENND2B/DENND2B_partitions/DENND2B_group3_DENND2B.fasta	DENND2B,
../firstrun/newGeneCopies/DENND2B/DENND2B_partitions/DENND2B_group4.fasta	../firstrun/newGeneCopies/DENND2B/DENND2B_partitions/DENND2B_group4_DENND2BOOOAKIP1.fasta	DENND2B,AKIP1,
../firstrun/newGeneCopies/ZNF468/ZNF468_partitions/ZNF468_group3.fasta	../firstrun/newGeneCopies/ZNF468/ZNF468_partitions/ZNF468_group3_ZNF468OOOPABPN1P2OOOZNF28.fasta	ZNF468,PABPN1P2,ZNF28,
../firstrun/newGeneCopies/PRUNE1/PRUNE1_partitions/PRUNE1_group1.fasta	../firstrun/newGeneCopies/PRUNE1/PRUNE1_partitions/PRUNE1_group1_PRUNE1OOOBNIPLOOOMINDY1.fasta	MINDY1,PRUNE1,BNIPL,RNU6-884P,
../firstrun/newGeneCopies/PRKN/PRKN_partitions/PRKN_group13.fasta	../firstrun/newGeneCopies/PRKN/PRKN_partitions/PRKN_group13_PRKNOOOPACRG.fasta	PACRG,PRKN,
../firstrun/newGeneCopies/PRKN/PRKN_partitions/PRKN_group8.fasta	../firstrun/newGeneCopies/PRKN/PRKN_partitions/PRKN_group8_PRKN.fasta	PRKN,
../firstrun/newGeneCopies/PRKN/PRKN_partitions/PRKN_group7.fasta	../firstrun/newGeneCopies/PRKN/PRKN_partitions/PRKN_group7_PRKN.fasta	PRKN,
../firstrun/newGeneCopies/PRKN/PRKN_partitions/PRKN_group1.fasta	../firstrun/newGeneCopies/PRKN/PRKN_partitions/PRKN_group1_PRKNOOOCTA-521C9v1OOOKB-152G3v2.fasta	KB-152G3.2,PRKN,CTA-521C9.1,
../firstrun/newGeneCopies/C18orf/C18orf_partitions/C18orf_group9.fasta	../firstrun/newGeneCopies/C18orf/C18orf_partitions/C18orf_group9_C18orf32OOORPL17-C18orf32OOOMIR1539.fasta	RPL17-C18orf32,MIR1539,SRP72P1,SNORD58C,C18orf32,SNORD58A,SNORD58B,RP11-110H1.4,RPL17,
../firstrun/newGeneCopies/MAPK1/MAPK1_partitions/MAPK1_group3.fasta	../firstrun/newGeneCopies/MAPK1/MAPK1_partitions/MAPK1_group3_MAPK1OOORNA5SP493.fasta	RNA5SP493,MAPK1,
../firstrun/newGeneCopies/POM121/POM121_partitions/POM121_group31.fasta	../firstrun/newGeneCopies/POM121/POM121_partitions/POM121_group31_POM121OOOPOM121BOOOPOM121C.fasta	POMZP3,POM121,NSUN5P2,NSUN5P1,PRKRIP1,RBAK-RBAKDN,RP11-313P13.5,RBAK,NSUN5,POM121C,AC004980.10,RP11-163E9.2,POM121B,AC006014.7,AC004980.7,TRIM73,PMS2CL,PMS2P3,
../firstrun/newGeneCopies/MYL2/MYL2_partitions/MYL2_group1.fasta	../firstrun/newGeneCopies/MYL2/MYL2_partitions/MYL2_group1_MYL2.fasta	MYL2,
../firstrun/newGeneCopies/ATP11/ATP11_partitions/ATP11_group9.fasta	../firstrun/newGeneCopies/ATP11/ATP11_partitions/ATP11_group9_ATP11AOOORP11-73M11v3.fasta	ATP11A,RP11-73M11.3,
../firstrun/newGeneCopies/ATP11/ATP11_partitions/ATP11_group6.fasta	../firstrun/newGeneCopies/ATP11/ATP11_partitions/ATP11_group6_ATP11AOOOATP11AUNOOORP11-88E10v5.fasta	ATP11AUN,ATP11A,RP11-88E10.5,
../firstrun/newGeneCopies/ATP11/ATP11_partitions/ATP11_group7.fasta	../firstrun/newGeneCopies/ATP11/ATP11_partitions/ATP11_group7_ATP11AOOOATP11A-AS1.fasta	ATP11A-AS1,ATP11A,
../firstrun/newGeneCopies/LHFPL1/LHFPL1_partitions/LHFPL1_group1.fasta	../firstrun/newGeneCopies/LHFPL1/LHFPL1_partitions/LHFPL1_group1_LHFPL1.fasta	LHFPL1,
../firstrun/newGeneCopies/LHFPL1/LHFPL1_partitions/LHFPL1_group2.fasta	../firstrun/newGeneCopies/LHFPL1/LHFPL1_partitions/LHFPL1_group2_LHFPL1OOOY_RNA.fasta	LHFPL1,Y_RNA,
../firstrun/newGeneCopies/TDRD1/TDRD1_partitions/TDRD1_group1.fasta	../firstrun/newGeneCopies/TDRD1/TDRD1_partitions/TDRD1_group1_TDRD1.fasta	TDRD1,
../firstrun/newGeneCopies/SLX1/SLX1_partitions/SLX1_group1.fasta	../firstrun/newGeneCopies/SLX1/SLX1_partitions/SLX1_group1_SLX1AOOOSLX1A-SULT1A3OOOSLX1B.fasta	SGF29,BOLA2-SMG1P6,BOLA2B,RP11-666O2.5,BOLA2,SULT1A4,SLX1A,RP11-345J4.4,SULT1A2,RP11-345J4.11,SLX1B-SULT1A4,RP11-231C14.10,SLX1B,SLX1A-SULT1A3,RP11-347C12.4,RP11-347C12.3,RP11-666O2.6,RP11-666O2.7,RP11-345J4.3,SULT1A1,RP11-666O2.4,SULT1A3,
../firstrun/newGeneCopies/COL1A1/COL1A1_partitions/COL1A1_group1.fasta	../firstrun/newGeneCopies/COL1A1/COL1A1_partitions/COL1A1_group1_COL1A1OOOH1-9POOORP11-893F2v5.fasta	COL1A1,H1-9P,RP11-893F2.5,
../firstrun/newGeneCopies/ELOA3/ELOA3_partitions/ELOA3_group1.fasta	../firstrun/newGeneCopies/ELOA3/ELOA3_partitions/ELOA3_group1_ELOA3OOOELOA3BOOOELOA3CP.fasta	ELOA3CP,ELOA3,KATNAL2,ELOA2,ELOA3D,ELOA3B,
../firstrun/newGeneCopies/YWHAE/YWHAE_partitions/YWHAE_group6.fasta	../firstrun/newGeneCopies/YWHAE/YWHAE_partitions/YWHAE_group6_YWHAEOOORP11-818O24v2.fasta	YWHAE,RP11-818O24.2,
../firstrun/newGeneCopies/CDK11/CDK11_partitions/CDK11_group1.fasta	../firstrun/newGeneCopies/CDK11/CDK11_partitions/CDK11_group1_CDK11AOOOCDK11BOOOMMP23A.fasta	SLC35E2A,RP1-283E3.8,RP11-345P4.10,RP1-283E3.4,CDK11A,MMP23B,CDK11B,SLC35E2B,MMP23A,
../firstrun/newGeneCopies/NRG4/NRG4_partitions/NRG4_group1.fasta	../firstrun/newGeneCopies/NRG4/NRG4_partitions/NRG4_group1_NRG4OOOFBXO22OOORP11-326L17v1.fasta	RP11-326L17.1,FBXO22,NRG4,
../firstrun/newGeneCopies/NRG4/NRG4_partitions/NRG4_group3.fasta	../firstrun/newGeneCopies/NRG4/NRG4_partitions/NRG4_group3_NRG4OOOTMEM266.fasta	TMEM266,NRG4,
../firstrun/newGeneCopies/C1QTNF9/C1QTNF9_partitions/C1QTNF9_group2.fasta	../firstrun/newGeneCopies/C1QTNF9/C1QTNF9_partitions/C1QTNF9_group2_C1QTNF9OOOC1QTNF9-AS1OOOC1QTNF9B.fasta	C1QTNF9-AS1,MIPEP,PCOTH,C1QTNF9B,RP11-307N16.7,SPATA13,RP11-307N16.6,C1QTNF9,
../firstrun/newGeneCopies/HNRNPC/HNRNPC_partitions/HNRNPC_group13.fasta	../firstrun/newGeneCopies/HNRNPC/HNRNPC_partitions/HNRNPC_group13_HNRNPCOOOHNRNPCP2OOOC2orf88.fasta	LINC00641,RNF11P1,HNRNPCP2,C2orf88,HNRNPC,
../firstrun/newGeneCopies/HNRNPC/HNRNPC_partitions/HNRNPC_group1.fasta	../firstrun/newGeneCopies/HNRNPC/HNRNPC_partitions/HNRNPC_group1_HNRNPCL1OOOHNRNPCL2OOOHNRNPCL3.fasta	CH17-223I5.7,PRAMEF33,HNRNPCL2,HNRNPCL1,HNRNPCL4,PRAMEF9,PRAMEF31P,PRAMEF5,PRAMEF4,PRAMEF30P,PRAMEF15,HNRNPCL3,PRAMEF27,PRAMEF11,PRAMEF6,PRAMEF26,PRAMEF25,
../firstrun/newGeneCopies/HNRNPC/HNRNPC_partitions/HNRNPC_group18.fasta	../firstrun/newGeneCopies/HNRNPC/HNRNPC_partitions/HNRNPC_group18_HNRNPC.fasta	HNRNPC,
../firstrun/newGeneCopies/CYP2G1P/CYP2G1P_partitions/CYP2G1P_group1.fasta	../firstrun/newGeneCopies/CYP2G1P/CYP2G1P_partitions/CYP2G1P_group1_CYP2G1POOOCTC-490E21v12OOOCYP2A7P2.fasta	CTC-490E21.12,CYP2G2P,CYP2G1P,CYP2A7P2,
../firstrun/newGeneCopies/HRAS/HRAS_partitions/HRAS_group1.fasta	../firstrun/newGeneCopies/HRAS/HRAS_partitions/HRAS_group1_HRASOOOLRRC56OOORP13-46H24v1.fasta	RP13-46H24.1,LRRC56,HRAS,
../firstrun/newGeneCopies/RBMY1/RBMY1_partitions/RBMY1_group5.fasta	../firstrun/newGeneCopies/RBMY1/RBMY1_partitions/RBMY1_group5_RBMY1A1OOORBMY1A3POOORBMY1B.fasta	RBMY1A3P,TSPY22P,TTTY20,AC010086.5,RBMY1J,RBMY1A1,RBMY2QP,AC010141.4,AC007322.3,RBMY2AP,RBMY2FP,RBMY1HP,RBMY1F,RP11-441G8.1,TSPY21P,RBMY1D,AC010141.6,AC007322.5,TSPY23P,TSPY20P,RBMY1B,RBMY1E,RBMY2EP,
../firstrun/newGeneCopies/STEAP2/STEAP2_partitions/STEAP2_group1.fasta	../firstrun/newGeneCopies/STEAP2/STEAP2_partitions/STEAP2_group1_STEAP2OOOSTEAP2-AS1OOOAC004800v1.fasta	STEAP2,RP5-1121E10.2,DPY19L2P2,DPY19L2P4,EEF1A1P6,STEAP1B,DPY19L1P1,AC004800.1,STEAP1,STEAP2-AS1,DPY19L2P1,
../firstrun/newGeneCopies/RHOF/RHOF_partitions/RHOF_group1.fasta	../firstrun/newGeneCopies/RHOF/RHOF_partitions/RHOF_group1_RHOFOOOLINC01089OOORP11-347I19v7.fasta	SETD1B,LINC01089,TMEM120B,RHOF,RP11-347I19.7,RP11-347I19.8,
../firstrun/newGeneCopies/HUWE1/HUWE1_partitions/HUWE1_group79.fasta	../firstrun/newGeneCopies/HUWE1/HUWE1_partitions/HUWE1_group79_HUWE1OOOMIR98OOOMIRLET7F2.fasta	MIR98,HUWE1,MIRLET7F2,
../firstrun/newGeneCopies/HUWE1/HUWE1_partitions/HUWE1_group80.fasta	../firstrun/newGeneCopies/HUWE1/HUWE1_partitions/HUWE1_group80_HUWE1.fasta	HUWE1,
../firstrun/newGeneCopies/ARL13B/ARL13B_partitions/ARL13B_group1.fasta	../firstrun/newGeneCopies/ARL13B/ARL13B_partitions/ARL13B_group1_ARL13BOOODHFR2OOOHMGN1P7.fasta	STX19,PROS1,ARL13B,HMGN1P7,DHFR2,RNU6-511P,
../firstrun/newGeneCopies/ADGRG7/ADGRG7_partitions/ADGRG7_group5.fasta	../firstrun/newGeneCopies/ADGRG7/ADGRG7_partitions/ADGRG7_group5_ADGRG7.fasta	ADGRG7,
../firstrun/newGeneCopies/ADGRG7/ADGRG7_partitions/ADGRG7_group4.fasta	../firstrun/newGeneCopies/ADGRG7/ADGRG7_partitions/ADGRG7_group4_ADGRG7OOOENSG10010140146v1OOOGMFBP1.fasta	GMFBP1,ADGRG7,ENSG10010140146.1,
../firstrun/newGeneCopies/PCMTD2/PCMTD2_partitions/PCMTD2_group1.fasta	../firstrun/newGeneCopies/PCMTD2/PCMTD2_partitions/PCMTD2_group1_PCMTD2OOOAC073135v8OOOAC096582v8.fasta	CICP11,RP4-669L17.4,CTD-2021A8.3,CICP8,RP4-669L17.8,SEPTIN14P24,RP11-291L22.9,RP11-34P13.7,LLNLF-173C4.2,FAM157C,CICP18,FAM157A,CICP20,SEPTIN14P5,LINC00266-1,SEPTIN14P21,LINC01347,RP11-476I15.5,CICP3,RP11-384K6.6,RP11-304M2.3,RP11-274B21.3,CICP16,LLNLF-173C4.1,AC073135.8,CICP15,CICP17,SEPT14P9,RP11-34P13.15,PCMTD2,CTD-2021A8.2,RP11-34P13.16,GTF2IP20,CICP21,CICP23,RP11-356C4.5,SEPTIN14P19,RP11-34P13.13,RP11-613E4.4,RP11-206L10.2,LINC01001,CICP6,RP11-206L10.17,ENSG00000288296,AC096582.8,GTF2IP12,LINC02887,RP5-1022E24.6,RP11-814E24.3,CICP25,LINC01002,RP11-291L22.4,AC138035.2,LLNLF-176F2.1,GTF2IP13,RP11-274B21.2,CICP13,CICP26,RP11-613E4.5,RP11-274B21.12,RP11-274B21.4,CICP14,CICP27,RP11-34P13.14,CICP9,RP11-304M2.6,CICP4,CICP5,CICP7,RP11-261C10.7,RP11-378J18.9,LINC02193,RP11-33B1.4,CICP19,
../firstrun/newGeneCopies/PSMA/PSMA_partitions/PSMA_group1.fasta	../firstrun/newGeneCopies/PSMA/PSMA_partitions/PSMA_group1_PSMA5OOOSORT1.fasta	SORT1,PSMA5,
../firstrun/newGeneCopies/GALR1/GALR1_partitions/GALR1_group1.fasta	../firstrun/newGeneCopies/GALR1/GALR1_partitions/GALR1_group1_GALR1.fasta	GALR1,
../firstrun/newGeneCopies/EHD2/EHD2_partitions/EHD2_group1.fasta	../firstrun/newGeneCopies/EHD2/EHD2_partitions/EHD2_group1_EHD2OOOCTD-2571L23v8OOONOP53.fasta	EHD2,NOP53,CTD-2571L23.8,
../firstrun/newGeneCopies/PGAM5/PGAM5_partitions/PGAM5_group2.fasta	../firstrun/newGeneCopies/PGAM5/PGAM5_partitions/PGAM5_group2_PGAM5OOOANKLE2OOORNA5SP379.fasta	PGAM5,RP13-672B3.2,ANKLE2,RNA5SP379,
../firstrun/newGeneCopies/CEACAM6/CEACAM6_partitions/CEACAM6_group2.fasta	../firstrun/newGeneCopies/CEACAM6/CEACAM6_partitions/CEACAM6_group2_CEACAM6OOOAC011513v3OOOAC011513v4.fasta	CEACAM3,CEACAM6,LIPE-AS1,AC011513.4,AC011513.3,CXCL17,
../firstrun/newGeneCopies/TMEM134/TMEM134_partitions/TMEM134_group1.fasta	../firstrun/newGeneCopies/TMEM134/TMEM134_partitions/TMEM134_group1_TMEM134OOOAIPOOOCABP4.fasta	TMEM134,AIP,CABP4,
../firstrun/newGeneCopies/OLFML/OLFML_partitions/OLFML_group3.fasta	../firstrun/newGeneCopies/OLFML/OLFML_partitions/OLFML_group3_OLFML2B.fasta	OLFML2B,
../firstrun/newGeneCopies/RNF121/RNF121_partitions/RNF121_group1.fasta	../firstrun/newGeneCopies/RNF121/RNF121_partitions/RNF121_group1_RNF121OOOIL18BPOOORP11-757C15v4.fasta	RP11-757C15.4,RP11-849H4.2,IL18BP,RNF121,
../firstrun/newGeneCopies/LYG1/LYG1_partitions/LYG1_group1.fasta	../firstrun/newGeneCopies/LYG1/LYG1_partitions/LYG1_group1_LYG1OOORP11-111H13v1.fasta	LYG1,RP11-111H13.1,
../firstrun/newGeneCopies/GPR65/GPR65_partitions/GPR65_group1.fasta	../firstrun/newGeneCopies/GPR65/GPR65_partitions/GPR65_group1_GPR65OOORP11-300J18v2.fasta	RP11-300J18.2,GPR65,
../firstrun/newGeneCopies/CYTL1/CYTL1_partitions/CYTL1_group1.fasta	../firstrun/newGeneCopies/CYTL1/CYTL1_partitions/CYTL1_group1_CYTL1.fasta	CYTL1,
../firstrun/newGeneCopies/S100A10/S100A10_partitions/S100A10_group1.fasta	../firstrun/newGeneCopies/S100A10/S100A10_partitions/S100A10_group1_S100A10OOOAL591893v1.fasta	AL591893.1,S100A10,
../firstrun/newGeneCopies/DHFR2/DHFR2_partitions/DHFR2_group1.fasta	../firstrun/newGeneCopies/DHFR2/DHFR2_partitions/DHFR2_group1_DHFR2OOOARL13BOOONSUN3.fasta	DHFR2,ARL13B,NSUN3,
../firstrun/newGeneCopies/PRH2/PRH2_partitions/PRH2_group1.fasta	../firstrun/newGeneCopies/PRH2/PRH2_partitions/PRH2_group1_PRH2OOOAC006518v7OOOPRH1.fasta	PRH1-PRR4,PRH1,TAS2R14,AC006518.7,PRH2,PRR4,
../firstrun/newGeneCopies/EID3/EID3_partitions/EID3_group1.fasta	../firstrun/newGeneCopies/EID3/EID3_partitions/EID3_group1_EID3OOOTXNRD1.fasta	EID3,TXNRD1,
../firstrun/newGeneCopies/CRHR1/CRHR1_partitions/CRHR1_group2.fasta	../firstrun/newGeneCopies/CRHR1/CRHR1_partitions/CRHR1_group2_CRHR1OOOLINC02210-CRHR1OOOMAPT-AS1.fasta	LINC02210-CRHR1,CRHR1,MAPT-AS1,
../firstrun/newGeneCopies/CRHR1/CRHR1_partitions/CRHR1_group1.fasta	../firstrun/newGeneCopies/CRHR1/CRHR1_partitions/CRHR1_group1_CRHR1OOOLINC02210-CRHR1OOOMAPT-AS1.fasta	LINC02210-CRHR1,CRHR1,MAPT-AS1,
../firstrun/newGeneCopies/MTHFD1/MTHFD1_partitions/MTHFD1_group13.fasta	../firstrun/newGeneCopies/MTHFD1/MTHFD1_partitions/MTHFD1_group13_MTHFD1OOOTEX21P.fasta	TEX21P,MTHFD1,
../firstrun/newGeneCopies/MTHFD1/MTHFD1_partitions/MTHFD1_group14.fasta	../firstrun/newGeneCopies/MTHFD1/MTHFD1_partitions/MTHFD1_group14_MTHFD1OOOAKAP5OOOCTD-2555O16v2.fasta	ZBTB25,AKAP5,CTD-2555O16.4,CTD-2555O16.2,MTHFD1,
../firstrun/newGeneCopies/LARP/LARP_partitions/LARP_group21.fasta	../firstrun/newGeneCopies/LARP/LARP_partitions/LARP_group21_LARP4BOOORP11-363N22v2.fasta	RP11-363N22.2,LARP4B,
../firstrun/newGeneCopies/STXBP3/STXBP3_partitions/STXBP3_group1.fasta	../firstrun/newGeneCopies/STXBP3/STXBP3_partitions/STXBP3_group1_STXBP3OOORP11-475E11v2.fasta	RP11-475E11.2,STXBP3,
../firstrun/newGeneCopies/DDX19/DDX19_partitions/DDX19_group1.fasta	../firstrun/newGeneCopies/DDX19/DDX19_partitions/DDX19_group1_DDX19AOOODDX19A-DTOOODDX19B.fasta	DDX19A-DT,DDX19B,AARS1,RP11-529K1.3,RP11-529K1.5,ST3GAL2,DDX19A,
../firstrun/newGeneCopies/TNFAIP6/TNFAIP6_partitions/TNFAIP6_group1.fasta	../firstrun/newGeneCopies/TNFAIP6/TNFAIP6_partitions/TNFAIP6_group1_TNFAIP6OOOMIR4773-1OOOMIR4773-2.fasta	RN7SL124P,TNFAIP6,MIR4773-1,MIR4773-2,
../firstrun/newGeneCopies/VWA3A/VWA3A_partitions/VWA3A_group1.fasta	../firstrun/newGeneCopies/VWA3A/VWA3A_partitions/VWA3A_group1_VWA3AOOORP11-101E7v2.fasta	RP11-101E7.2,VWA3A,
../firstrun/newGeneCopies/FUZ/FUZ_partitions/FUZ_group1.fasta	../firstrun/newGeneCopies/FUZ/FUZ_partitions/FUZ_group1_FUZOOOAC006942v4OOOAP2A1.fasta	MED25,FUZ,AP2A1,AC006942.4,
../firstrun/newGeneCopies/CHORDC1/CHORDC1_partitions/CHORDC1_group4.fasta	../firstrun/newGeneCopies/CHORDC1/CHORDC1_partitions/CHORDC1_group4_CHORDC1OOOCHORDC1P4OOOAP000648v5.fasta	CHORDC1P4,AP000648.5,RP11-737O24.2,RP11-121L10.2,LPIN2,CHORDC1,
../firstrun/newGeneCopies/MMP9/MMP9_partitions/MMP9_group1.fasta	../firstrun/newGeneCopies/MMP9/MMP9_partitions/MMP9_group1_MMP9OOOSLC12A5-AS1.fasta	MMP9,SLC12A5-AS1,
../firstrun/newGeneCopies/SMIM6/SMIM6_partitions/SMIM6_group1.fasta	../firstrun/newGeneCopies/SMIM6/SMIM6_partitions/SMIM6_group1_SMIM6OOORECQL5OOOSMIM5.fasta	RECQL5,SMIM6,SMIM5,
../firstrun/newGeneCopies/JAKMIP3/JAKMIP3_partitions/JAKMIP3_group1.fasta	../firstrun/newGeneCopies/JAKMIP3/JAKMIP3_partitions/JAKMIP3_group1_JAKMIP3.fasta	JAKMIP3,
../firstrun/newGeneCopies/JAKMIP3/JAKMIP3_partitions/JAKMIP3_group2.fasta	../firstrun/newGeneCopies/JAKMIP3/JAKMIP3_partitions/JAKMIP3_group2_JAKMIP3OOODPYSL4OOORP11-140A10v3.fasta	DPYSL4,RP11-140A10.3,JAKMIP3,
../firstrun/newGeneCopies/GOLPH/GOLPH_partitions/GOLPH_group1.fasta	../firstrun/newGeneCopies/GOLPH/GOLPH_partitions/GOLPH_group1_GOLPH3LOOOHORMAD1OOORNU6-1042P.fasta	RNU6-1042P,HORMAD1,GOLPH3L,
../firstrun/newGeneCopies/ELOB/ELOB_partitions/ELOB_group5.fasta	../firstrun/newGeneCopies/ELOB/ELOB_partitions/ELOB_group5_ELOBOOOCTD-2270P14v5OOOSRRM2.fasta	ELOB,SRRM2,CTD-2270P14.5,
../firstrun/newGeneCopies/FER1/FER1_partitions/FER1_group1.fasta	../firstrun/newGeneCopies/FER1/FER1_partitions/FER1_group1_FER1L5OOOKANSL3OOOLMAN2L.fasta	KANSL3,FER1L5,LMAN2L,
../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group13.fasta	../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group13_MAP3K13.fasta	MAP3K13,
../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group12.fasta	../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group12_MAP3K13OOOEHHADH.fasta	MAP3K13,EHHADH,
../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group26.fasta	../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group26_MAP3K4OOOMAP3K4-AS1.fasta	MAP3K4-AS1,MAP3K4,
../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group36.fasta	../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group36_MAP3K12OOOATF7OOOATF7-NPFF.fasta	NPFF,TARBP2,ATF7,ATF7-NPFF,MAP3K12,RP11-793H13.11,PCBP2,
../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group15.fasta	../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group15_MAP3K13OOORPL4P4OOOTMEM41A.fasta	TMEM41A,MAP3K13,RPL4P4,
../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group34.fasta	../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group34_MAP3K11OOOKCNK7OOOPCNX3.fasta	MAP3K11,PCNX3,KCNK7,
../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group14.fasta	../firstrun/newGeneCopies/MAP3/MAP3_partitions/MAP3_group14_MAP3K13.fasta	MAP3K13,
../firstrun/newGeneCopies/VPS72/VPS72_partitions/VPS72_group1.fasta	../firstrun/newGeneCopies/VPS72/VPS72_partitions/VPS72_group1_VPS72OOOPIP5K1AOOOSCNM1.fasta	PIP5K1A,VPS72,SCNM1,TMOD4,
../firstrun/newGeneCopies/AIF1/AIF1_partitions/AIF1_group1.fasta	../firstrun/newGeneCopies/AIF1/AIF1_partitions/AIF1_group1_AIF1OOOPRRC2AOOOSNORA38.fasta	AIF1,SNORA38,PRRC2A,UQCRHP1,
../firstrun/newGeneCopies/NPFF/NPFF_partitions/NPFF_group101.fasta	../firstrun/newGeneCopies/NPFF/NPFF_partitions/NPFF_group101_ATF7-NPFFOOONPFFOOOATF7.fasta	RP11-793H13.11,NPFF,TARBP2,ATF7,RP11-793H13.3,ATF7-NPFF,MAP3K12,
../firstrun/newGeneCopies/ZNF479/ZNF479_partitions/ZNF479_group1.fasta	../firstrun/newGeneCopies/ZNF479/ZNF479_partitions/ZNF479_group1_ZNF479OOORP11-1217F2v29OOOZNF733P.fasta	ZNF733P,RP11-1217F2.29,ZNF479,ZNF734P,
../firstrun/newGeneCopies/AKAP11/AKAP11_partitions/AKAP11_group1.fasta	../firstrun/newGeneCopies/AKAP11/AKAP11_partitions/AKAP11_group1_AKAP11.fasta	AKAP11,
../firstrun/newGeneCopies/SDHA/SDHA_partitions/SDHA_group50.fasta	../firstrun/newGeneCopies/SDHA/SDHA_partitions/SDHA_group50_SDHAOOOSDHAP1OOOSDHAP2.fasta	CTD-2546F11.1,SDHA,MUC20-OT1,CTD-2083E4.4,SDHAP2,RP11-43F13.1,CTD-2012J19.3,SDHAP3,SDHAP1,CTD-2012J19.2,AC069513.4,AC024560.3,CCDC127,
../firstrun/newGeneCopies/HMGCL/HMGCL_partitions/HMGCL_group1.fasta	../firstrun/newGeneCopies/HMGCL/HMGCL_partitions/HMGCL_group1_HMGCLOOOGALE.fasta	HMGCL,GALE,
../firstrun/newGeneCopies/RNF213/RNF213_partitions/RNF213_group34.fasta	../firstrun/newGeneCopies/RNF213/RNF213_partitions/RNF213_group34_RNF213OOORNF213-AS1OOOCTD-2047H16v2.fasta	CTD-2047H16.5,RNF213-AS1,ENDOV,CTD-2047H16.2,CTD-2047H16.3,RNF213,
../firstrun/newGeneCopies/RBM28/RBM28_partitions/RBM28_group3.fasta	../firstrun/newGeneCopies/RBM28/RBM28_partitions/RBM28_group3_RBM28OOORNU7-27POOORP11-62J1v3.fasta	RP11-62J1.3,RNU7-27P,RBM28,
../firstrun/newGeneCopies/MRGPR/MRGPR_partitions/MRGPR_group6.fasta	../firstrun/newGeneCopies/MRGPR/MRGPR_partitions/MRGPR_group6_MRGPRX1OOOMRGPRX10POOOMRGPRX11P.fasta	RP11-113D6.6,MRGPRX11P,MRGPRX12P,MRGPRX4,RP11-583F24.8,MRGPRX3,MRGPRX10P,MRGPRX1,
../firstrun/newGeneCopies/MRGPR/MRGPR_partitions/MRGPR_group18.fasta	../firstrun/newGeneCopies/MRGPR/MRGPR_partitions/MRGPR_group18_MRGPRFOOOMRGPRF-AS1OOORP11-554A11v4.fasta	RP11-554A11.5,MRGPRF,RP11-554A11.4,MRGPRF-AS1,
../firstrun/newGeneCopies/PPIAL4/PPIAL4_partitions/PPIAL4_group1.fasta	../firstrun/newGeneCopies/PPIAL4/PPIAL4_partitions/PPIAL4_group1_PPIAL4AOOOPPIAL4COOOPPIAL4D.fasta	PPIAL4G,LINC01138,RP11-269M20.1,PPIAL4F,PPIAL4H,PPIAL4A,PPIAL4D,PPIAL4C,SEC22B4P,PPIAL4E,
../firstrun/newGeneCopies/BTNL3/BTNL3_partitions/BTNL3_group1.fasta	../firstrun/newGeneCopies/BTNL3/BTNL3_partitions/BTNL3_group1_BTNL3OOOBTNL8OOORNU6-1036P.fasta	RNU6-1036P,BTNL8,BTNL3,RPS29P12,
../firstrun/newGeneCopies/NAGA/NAGA_partitions/NAGA_group1.fasta	../firstrun/newGeneCopies/NAGA/NAGA_partitions/NAGA_group1_NAGAOOOCTA-250D10v24OOOWBP2NL.fasta	WBP2NL,CTA-250D10.24,NAGA,
../firstrun/newGeneCopies/GP1BA/GP1BA_partitions/GP1BA_group1.fasta	../firstrun/newGeneCopies/GP1BA/GP1BA_partitions/GP1BA_group1_GP1BAOOOCHRNEOOORNF167.fasta	SLC25A11,CHRNE,RNF167,GP1BA,
../firstrun/newGeneCopies/MRPL30/MRPL30_partitions/MRPL30_group1.fasta	../firstrun/newGeneCopies/MRPL30/MRPL30_partitions/MRPL30_group1_MRPL30OOOMITD1OOORP11-111H13v1.fasta	RP11-38C17.1,RP11-111H13.1,MITD1,MRPL30,
../firstrun/newGeneCopies/UBE3/UBE3_partitions/UBE3_group10.fasta	../firstrun/newGeneCopies/UBE3/UBE3_partitions/UBE3_group10_UBE3AOOORP13-487P22v1OOOSNHG14.fasta	SNHG14,RP13-487P22.1,UBE3A,
../firstrun/newGeneCopies/PIAS3/PIAS3_partitions/PIAS3_group1.fasta	../firstrun/newGeneCopies/PIAS3/PIAS3_partitions/PIAS3_group1_PIAS3OOOMIR6736OOONUDT17.fasta	MIR6736,PIAS3,NUDT17,
../firstrun/newGeneCopies/GOLGA/GOLGA_partitions/GOLGA_group23.fasta	../firstrun/newGeneCopies/GOLGA/GOLGA_partitions/GOLGA_group23_GOLGA3OOOANKLE2OOOCHFR.fasta	GOLGA3,CHFR,RPS11P5,ANKLE2,
../firstrun/newGeneCopies/GOLGA/GOLGA_partitions/GOLGA_group09602.fasta	../firstrun/newGeneCopies/GOLGA/GOLGA_partitions/GOLGA_group09602_GOLGA8AOOOGOLGA8BOOOGOLGA8CP.fasta	GOLGA8O,MIR1233-2,GOLGA8K,RP11-632K20.8,AC026150.8,DNM1P50,RN7SL238P,RN7SL628P,ENSG00000288202,GOLGA8DP,WHAMMP3,GOLGA8M,RP11-1000B6.7,MIR1233-1,RP11-1H8.1,RP11-1H8.4,RP11-932O9.3,ENSG00000288148,GOLGA8F,GOLGA8Q,ENSG00000288354,ULK4P3,CHRFAM7A,RP13-395E19.3,ULK4P2,RP11-932O9.9,ENSG00000288339,RN7SL82P,WHAMMP2,DNM1P31,CTD-3092A11.1,RP11-382B18.5,RN7SL286P,RN7SL796P,RN7SL719P,GOLGA8H,RP11-932O9.7,GOLGA8G,RP11-1000B6.8,RP13-395E19.5,GOLGA8N,RN7SL759P,ENSG00000283465,GOLGA8EP,RN7SL469P,DNM1P32,RN7SL539P,DNM1P30,RN7SL196P,GOLGA8UP,RP11-1H8.5,GOLGA8A,GOLGA8S,RN7SL545P,GOLGA8IP,ENSG00000288128,RP11-932O9.8,DNM1P28,GOLGA8CP,RN7SL106P,GOLGA8T,RP11-382B18.6,GOLGA8R,RN7SL185P,ULK4P1,GOLGA8B,ENSG00000281960,RN7SL495P,GOLGA8J,Metazoa_SRP,ENSG00000282670,RP11-602M11.4,RP11-632K20.7,RN7SL536P,RN7SL673P,LINC02256,
../firstrun/newGeneCopies/GOLGA/GOLGA_partitions/GOLGA_group096028.fasta	../firstrun/newGeneCopies/GOLGA/GOLGA_partitions/GOLGA_group096028_GOLGA6AOOOGOLGA6BOOOGOLGA6C.fasta	GOLGA6A,RP11-114H24.2,RN7SL853P,RN7SL429P,RN7SL319P,GOLGA6D,DNM1P49,CHRNB4,RP11-160C18.2,RN7SL327P,CSPG4P13,RP11-114H24.7,DNM1P34,RP11-24M17.5,RN7SL214P,GOLGA6B,GOLGA6C,RN7SL489P,
../firstrun/newGeneCopies/GOLGA/GOLGA_partitions/GOLGA_group7.fasta	../firstrun/newGeneCopies/GOLGA/GOLGA_partitions/GOLGA_group7_GOLGA6L1OOOGOLGA6L2OOOGOLGA6L22.fasta	ELMO2P1,CH17-184J24.1,RP11-632K20.6,HERC2P6,RP11-467L19.8,RP11-529J17.5,HERC2P11,RP11-632K20.2,RP11-483E23.3,GOLGA6L6,RP11-536P16.3,RP11-44F14.1,RP11-483E23.2,RP11-578F21.4,RP11-44F14.4,RP11-536P16.2,AC026150.6,RP11-467L19.6,GOLGA6L22,RP11-536P16.4,NIPA1,GOLGA6L7,GOLGA6L1,RP11-566K19.12,PDCD6IPP2,CTD-3092A11.3,RP11-404K5.2,RP11-566K19.9,RP11-566K19.5,HERC2P1,RP11-404K5.1,ENSG00000288440,RP11-147B8.4,RP11-566K19.6,RP11-467N20.6,ENSG00000288173,RP11-483E23.7,GOLGA6L2,RP11-536P16.8,HERC2P7,
../firstrun/newGeneCopies/GOLGA/GOLGA_partitions/GOLGA_group096034.fasta	../firstrun/newGeneCopies/GOLGA/GOLGA_partitions/GOLGA_group096034_GOLGA2P10OOOGOLGA2P2YOOOGOLGA2P3Y.fasta	RN7SL428P,RP11-182J1.10,CSPG4P2Y,RP11-533E23.1,GOLGA6L9,GOLGA6L11P,RN7SL725P,RP11-671M22.4,GOLGA6L4,DNM1P24,CSPG4P11,AC007562.1,RP11-152F13.8,GOLGA6L17P,CSPG4P10,RP11-182J1.14,AC023274.6,RP11-152F13.13,DNM1P41,RP11-102O5.1,RP11-182J1.13,DNM1P51,RP11-561C5.4,RP13-262C2.3,UBE2Q2P1,UBE2Q2P8,RPL9P9,UBE2Q2L,GOLGA2P7,GOLGA6L3,UBE2Q2P4Y,RP13-608F4.5,ENSG00000275049,RN7SL331P,GOLGA6L5P,GOLGA6L16P,RP11-182J1.11,AC023274.4,AC006328.9,UBE2Q2P6,CSPG4P5,RP11-182J1.12,UBE2Q2P12,GOLGA6L10,CSPG4P1Y,GOLGA2P3Y,CSPG4P12,UBE2Q2P5Y,UBE2Q2P11,UBE2Q2P2,RN7SL417P,RN7SL818P,GOLGA2P10,Metazoa_SRP,DNM1P48,DNM1P38,GOLGA2P2Y,
../firstrun/newGeneCopies/DRAP1/DRAP1_partitions/DRAP1_group1.fasta	../firstrun/newGeneCopies/DRAP1/DRAP1_partitions/DRAP1_group1_DRAP1OOOC11orf68.fasta	DRAP1,C11orf68,
../firstrun/newGeneCopies/RPL21/RPL21_partitions/RPL21_group80.fasta	../firstrun/newGeneCopies/RPL21/RPL21_partitions/RPL21_group80_RPL21OOOLINC00412OOOLINC02340.fasta	SNORA27,LINC02340,SNORD102,LINC00412,RPL21,
../firstrun/newGeneCopies/CEP57L1/CEP57L1_partitions/CEP57L1_group2.fasta	../firstrun/newGeneCopies/CEP57L1/CEP57L1_partitions/CEP57L1_group2_CEP57L1OOOCCDC162P.fasta	CCDC162P,CEP57L1,
../firstrun/newGeneCopies/CEP57L1/CEP57L1_partitions/CEP57L1_group1.fasta	../firstrun/newGeneCopies/CEP57L1/CEP57L1_partitions/CEP57L1_group1_CEP57L1OOOSESN1.fasta	SESN1,CEP57L1,
../firstrun/newGeneCopies/GMCL1/GMCL1_partitions/GMCL1_group1.fasta	../firstrun/newGeneCopies/GMCL1/GMCL1_partitions/GMCL1_group1_GMCL1OOOANXA4OOORP11-401N16v2.fasta	RPL23AP92,RP11-401N16.2,ANXA4,GMCL1,
../firstrun/newGeneCopies/NRGN/NRGN_partitions/NRGN_group1.fasta	../firstrun/newGeneCopies/NRGN/NRGN_partitions/NRGN_group1_NRGNOOORP11-677M14v2OOOVSIG2.fasta	RP11-677M14.2,NRGN,VSIG2,
../firstrun/newGeneCopies/BAG/BAG_partitions/BAG_group9.fasta	../firstrun/newGeneCopies/BAG/BAG_partitions/BAG_group9_BAG6OOOAPOMOOOPRRC2A.fasta	APOM,BAG6,PRRC2A,
../firstrun/newGeneCopies/BAG/BAG_partitions/BAG_group10.fasta	../firstrun/newGeneCopies/BAG/BAG_partitions/BAG_group10_BAG2OOORAB23OOOZNF451.fasta	RAB23,ZNF451,ZNF451-AS1,BAG2,
../firstrun/newGeneCopies/BAG/BAG_partitions/BAG_group19.fasta	../firstrun/newGeneCopies/BAG/BAG_partitions/BAG_group19_BAG3.fasta	BAG3,
../firstrun/newGeneCopies/CTB-60B18.6/CTB-60B18.6_partitions/CTB-60B18.6_group1.fasta	../firstrun/newGeneCopies/CTB-60B18.6/CTB-60B18.6_partitions/CTB-60B18.6_group1_CTB-60B18v6OOOCGB1OOOCGB2.fasta	CTB-60B18.6,NTF6G,CTB-60B18.23,CGB1,CTB-60B18.15,CGB8,CGB2,NTF4,CTB-60B18.22,NTF6A,RUVBL2,CGB3,CTB-60B18.17,CTB-60B18.10,CTB-60B18.12,CGB5,NTF6B,LHB,CGB7,
../firstrun/newGeneCopies/BCAP31/BCAP31_partitions/BCAP31_group1.fasta	../firstrun/newGeneCopies/BCAP31/BCAP31_partitions/BCAP31_group1_BCAP31OOOBCAP31P1OOOBCAP31P2.fasta	BCAP31,BCAP31P2,ABCD1,BCAP31P1,RP11-598D12.4,
../firstrun/newGeneCopies/LIPH/LIPH_partitions/LIPH_group1.fasta	../firstrun/newGeneCopies/LIPH/LIPH_partitions/LIPH_group1_LIPH.fasta	LIPH,
../firstrun/newGeneCopies/EPHB3/EPHB3_partitions/EPHB3_group1.fasta	../firstrun/newGeneCopies/EPHB3/EPHB3_partitions/EPHB3_group1_EPHB3.fasta	EPHB3,
../firstrun/newGeneCopies/TGFB3/TGFB3_partitions/TGFB3_group1.fasta	../firstrun/newGeneCopies/TGFB3/TGFB3_partitions/TGFB3_group1_TGFB3OOOTGFB3-AS1OOOIFT43.fasta	TGFB3,IFT43,TGFB3-AS1,
../firstrun/newGeneCopies/SRSF11/SRSF11_partitions/SRSF11_group1.fasta	../firstrun/newGeneCopies/SRSF11/SRSF11_partitions/SRSF11_group1_SRSF11OOOLRRC40OOORP4-677H15v4.fasta	SRSF11,LRRC40,RP4-677H15.4,
../firstrun/newGeneCopies/MAGED4/MAGED4_partitions/MAGED4_group1.fasta	../firstrun/newGeneCopies/MAGED4/MAGED4_partitions/MAGED4_group1_MAGED4OOOMAGED4BOOORP11-775F1v2.fasta	SNORA11D,RP11-775F1.2,MAGED4,SNORA11E,MAGED4B,
../firstrun/newGeneCopies/CENPT/CENPT_partitions/CENPT_group1.fasta	../firstrun/newGeneCopies/CENPT/CENPT_partitions/CENPT_group1_CENPTOOONUTF2OOOTHAP11.fasta	TSNAXIP1,NUTF2,THAP11,CENPT,
../firstrun/newGeneCopies/MEX3/MEX3_partitions/MEX3_group3.fasta	../firstrun/newGeneCopies/MEX3/MEX3_partitions/MEX3_group3_MEX3B.fasta	MEX3B,
../firstrun/newGeneCopies/MEX3/MEX3_partitions/MEX3_group4.fasta	../firstrun/newGeneCopies/MEX3/MEX3_partitions/MEX3_group4_MEX3C.fasta	MEX3C,
../firstrun/newGeneCopies/THNSL2/THNSL2_partitions/THNSL2_group1.fasta	../firstrun/newGeneCopies/THNSL2/THNSL2_partitions/THNSL2_group1_THNSL2.fasta	THNSL2,
../firstrun/newGeneCopies/COX7B/COX7B_partitions/COX7B_group11.fasta	../firstrun/newGeneCopies/COX7B/COX7B_partitions/COX7B_group11_COX7BOOOATP7A.fasta	ATP7A,COX7B,
../firstrun/newGeneCopies/FCER1A/FCER1A_partitions/FCER1A_group1.fasta	../firstrun/newGeneCopies/FCER1A/FCER1A_partitions/FCER1A_group1_FCER1A.fasta	FCER1A,
../firstrun/newGeneCopies/HORMAD/HORMAD_partitions/HORMAD_group23.fasta	../firstrun/newGeneCopies/HORMAD/HORMAD_partitions/HORMAD_group23_HORMAD2OOOHORMAD2-AS1OOOCNN2P1.fasta	CTA-85E5.7,RPS3AP51,HORMAD2-AS1,CNN2P1,HORMAD2,
../firstrun/newGeneCopies/HORMAD/HORMAD_partitions/HORMAD_group25.fasta	../firstrun/newGeneCopies/HORMAD/HORMAD_partitions/HORMAD_group25_HORMAD2.fasta	HORMAD2,
../firstrun/newGeneCopies/HORMAD/HORMAD_partitions/HORMAD_group2.fasta	../firstrun/newGeneCopies/HORMAD/HORMAD_partitions/HORMAD_group2_HORMAD1OOOGOLPH3LOOORNU6-1042P.fasta	GOLPH3L,RNU6-1042P,HORMAD1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group1.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group1_NRXN1.fasta	NRXN1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group10.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group10_NRXN1.fasta	NRXN1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group12.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group12_NRXN1.fasta	NRXN1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group3.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group3_NRXN1.fasta	NRXN1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group15.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group15_NRXN1.fasta	NRXN1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group4.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group4_NRXN1.fasta	NRXN1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group8.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group8_NRXN1.fasta	NRXN1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group18.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group18_NRXN1OOOAC007682v1.fasta	NRXN1,AC007682.1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group9.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group9_NRXN1.fasta	NRXN1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group6.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group6_NRXN1.fasta	NRXN1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group17.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group17_NRXN1OOOAC007682v1.fasta	NRXN1,AC007682.1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group7.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group7_NRXN1.fasta	NRXN1,
../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group16.fasta	../firstrun/newGeneCopies/NRXN1/NRXN1_partitions/NRXN1_group16_NRXN1OOOAC007682v1OOORP11-391D19v1.fasta	NRXN1,AC007682.1,RP11-391D19.1,
../firstrun/newGeneCopies/FXN/FXN_partitions/FXN_group1.fasta	../firstrun/newGeneCopies/FXN/FXN_partitions/FXN_group1_FXNOOORP11-16N10v2.fasta	FXN,RP11-16N10.2,
../firstrun/newGeneCopies/MED12/MED12_partitions/MED12_group10.fasta	../firstrun/newGeneCopies/MED12/MED12_partitions/MED12_group10_MED12OOONLGN3.fasta	NLGN3,MED12,
../firstrun/newGeneCopies/SMIM38/SMIM38_partitions/SMIM38_group1.fasta	../firstrun/newGeneCopies/SMIM38/SMIM38_partitions/SMIM38_group1_SMIM38OOORP11-554A11v11OOORP11-554A11v8.fasta	RP11-554A11.8,SMIM38,RP11-554A11.11,
../firstrun/newGeneCopies/TMEM185/TMEM185_partitions/TMEM185_group3.fasta	../firstrun/newGeneCopies/TMEM185/TMEM185_partitions/TMEM185_group3_TMEM185AOOOTMEM185AP1OOOHSFX1.fasta	TMEM185A,HSFX2,TMEM185AP1,HSFX1,
../firstrun/newGeneCopies/EIF3H/EIF3H_partitions/EIF3H_group40.fasta	../firstrun/newGeneCopies/EIF3H/EIF3H_partitions/EIF3H_group40_EIF3H.fasta	EIF3H,
../firstrun/newGeneCopies/EIF3H/EIF3H_partitions/EIF3H_group39.fasta	../firstrun/newGeneCopies/EIF3H/EIF3H_partitions/EIF3H_group39_EIF3H.fasta	EIF3H,
../firstrun/newGeneCopies/EIF3H/EIF3H_partitions/EIF3H_group41.fasta	../firstrun/newGeneCopies/EIF3H/EIF3H_partitions/EIF3H_group41_EIF3HOOOUTP23.fasta	UTP23,EIF3H,
../firstrun/newGeneCopies/EIF3H/EIF3H_partitions/EIF3H_group38.fasta	../firstrun/newGeneCopies/EIF3H/EIF3H_partitions/EIF3H_group38_EIF3H.fasta	EIF3H,
../firstrun/newGeneCopies/SYCE1/SYCE1_partitions/SYCE1_group1.fasta	../firstrun/newGeneCopies/SYCE1/SYCE1_partitions/SYCE1_group1_SYCE1OOOCYP2E1OOOMTG1.fasta	XX-2136C111.4,RP11-108K14.8,SPRN,SYCE1,OR6L2P,MTG1,CYP2E1,
../firstrun/newGeneCopies/GKN/GKN_partitions/GKN_group3.fasta	../firstrun/newGeneCopies/GKN/GKN_partitions/GKN_group3_GKN1.fasta	GKN1,
../firstrun/newGeneCopies/GKN/GKN_partitions/GKN_group2.fasta	../firstrun/newGeneCopies/GKN/GKN_partitions/GKN_group2_GKN2.fasta	GKN2,
../firstrun/newGeneCopies/FAM153/FAM153_partitions/FAM153_group4.fasta	../firstrun/newGeneCopies/FAM153/FAM153_partitions/FAM153_group4_FAM153AOOOFAM153BOOOFAM153CP.fasta	RP11-826N14.2,RP11-826N14.7,RP11-844P9.1,RP11-844P9.5,RP11-826N14.8,RP11-1026M7.2,RP11-889L3.1,RP11-96K14.1,FAM153CP,FAM153DP,RP11-844P9.4,FAM153B,RP11-844P9.6,RP11-1101H11.1,RP11-844P9.2,RP11-652G5.2,FAM153A,
../firstrun/newGeneCopies/CRIP/CRIP_partitions/CRIP_group8.fasta	../firstrun/newGeneCopies/CRIP/CRIP_partitions/CRIP_group8_CRIP1OOOCRIP2OOOAL928654v7.fasta	TEDC1,MTA1,RP11-521B24.5,AL928654.7,CRIP1,CRIP2,
../firstrun/newGeneCopies/ALPP/ALPP_partitions/ALPP_group1.fasta	../firstrun/newGeneCopies/ALPP/ALPP_partitions/ALPP_group1_ALPPOOOAC068134v8OOOALPG.fasta	AC068134.8,ALPP,ECEL1P2,ALPG,
../firstrun/newGeneCopies/SERHL2/SERHL2_partitions/SERHL2_group1.fasta	../firstrun/newGeneCopies/SERHL2/SERHL2_partitions/SERHL2_group1_SERHL2OOORN7SKP80OOORNU6-513P.fasta	RN7SKP80,RRP7BP,SERHL,RNU6-513P,SERHL2,RRP7A,
../firstrun/newGeneCopies/METRNL/METRNL_partitions/METRNL_group1.fasta	../firstrun/newGeneCopies/METRNL/METRNL_partitions/METRNL_group1_METRNLOOOAC144831v3.fasta	AC144831.3,METRNL,
../firstrun/newGeneCopies/BRD9/BRD9_partitions/BRD9_group1.fasta	../firstrun/newGeneCopies/BRD9/BRD9_partitions/BRD9_group1_BRD9OOOBRD9P2OOOCTD-2589H19v6.fasta	TPPP,CTD-2589H19.6,TRIP13,CTD-2589H19.7,ZDHHC11,ZDHHC11B,BRD9P2,BRD9,
../firstrun/newGeneCopies/RAD21/RAD21_partitions/RAD21_group1.fasta	../firstrun/newGeneCopies/RAD21/RAD21_partitions/RAD21_group1_RAD21OOORAD21-AS1OOOMIR3610.fasta	MIR3610,RAD21,UTP23,RAD21-AS1,
../firstrun/newGeneCopies/UGT2B28/UGT2B28_partitions/UGT2B28_group1.fasta	../firstrun/newGeneCopies/UGT2B28/UGT2B28_partitions/UGT2B28_group1_UGT2B28OOORP11-468N14v1OOORP11-618I10v3.fasta	RP11-704M14.1,UGT2B11,RP11-704M14.2,RP11-618I10.3,UGT2B27P,UGT2B28,UGT2B25P,RP11-790I12.6,RP11-813N20.2,UGT2B10,RP11-468N14.1,UGT2B24P,
../firstrun/newGeneCopies/XPO1/XPO1_partitions/XPO1_group1.fasta	../firstrun/newGeneCopies/XPO1/XPO1_partitions/XPO1_group1_XPO1OOORP11-355B11v3OOOUSP34-DT.fasta	RP11-355B11.3,XPO1,USP34-DT,
../firstrun/newGeneCopies/HJV/HJV_partitions/HJV_group1.fasta	../firstrun/newGeneCopies/HJV/HJV_partitions/HJV_group1_HJV.fasta	HJV,
../firstrun/newGeneCopies/STAR/STAR_partitions/STAR_group21.fasta	../firstrun/newGeneCopies/STAR/STAR_partitions/STAR_group21_STAROOOASH2LOOORP11-90P5v2.fasta	STAR,RP11-90P5.2,ASH2L,
../firstrun/newGeneCopies/STAR/STAR_partitions/STAR_group4.fasta	../firstrun/newGeneCopies/STAR/STAR_partitions/STAR_group4_STARD7OOOSTARD7-AS1.fasta	STARD7,STARD7-AS1,
../firstrun/newGeneCopies/KIF3B/KIF3B_partitions/KIF3B_group1.fasta	../firstrun/newGeneCopies/KIF3B/KIF3B_partitions/KIF3B_group1_KIF3BOOORP11-392M18v6.fasta	RP11-392M18.6,KIF3B,
../firstrun/newGeneCopies/PRPF3/PRPF3_partitions/PRPF3_group1.fasta	../firstrun/newGeneCopies/PRPF3/PRPF3_partitions/PRPF3_group1_PRPF3.fasta	PRPF3,
../firstrun/newGeneCopies/VPS45/VPS45_partitions/VPS45_group1.fasta	../firstrun/newGeneCopies/VPS45/VPS45_partitions/VPS45_group1_VPS45OOOCH17-55D9v1.fasta	CH17-55D9.1,VPS45,
../firstrun/newGeneCopies/HSPA2/HSPA2_partitions/HSPA2_group1.fasta	../firstrun/newGeneCopies/HSPA2/HSPA2_partitions/HSPA2_group1_HSPA2OOORP11-973N13v4OOORP11-973N13v5.fasta	RP11-973N13.4,ZBTB1,RP11-973N13.5,HSPA2,
../firstrun/newGeneCopies/SENP5/SENP5_partitions/SENP5_group1.fasta	../firstrun/newGeneCopies/SENP5/SENP5_partitions/SENP5_group1_SENP5OOOAC127904v2OOONCBP2.fasta	SENP5,AC127904.2,NCBP2,
../firstrun/newGeneCopies/CD1B/CD1B_partitions/CD1B_group1.fasta	../firstrun/newGeneCopies/CD1B/CD1B_partitions/CD1B_group1_CD1B.fasta	CD1B,
../firstrun/newGeneCopies/CCND1/CCND1_partitions/CCND1_group1.fasta	../firstrun/newGeneCopies/CCND1/CCND1_partitions/CCND1_group1_CCND1OOOLTO1.fasta	LTO1,CCND1,
../firstrun/newGeneCopies/RELL2/RELL2_partitions/RELL2_group1.fasta	../firstrun/newGeneCopies/RELL2/RELL2_partitions/RELL2_group1_RELL2OOOFCHSD1OOOHDAC3.fasta	RELL2,FCHSD1,HDAC3,
../firstrun/newGeneCopies/ULK3/ULK3_partitions/ULK3_group1.fasta	../firstrun/newGeneCopies/ULK3/ULK3_partitions/ULK3_group1_ULK3OOOMIR6882OOOSCAMP2.fasta	MIR6882,ULK3,SCAMP2,
../firstrun/newGeneCopies/HLA-V/HLA-V_partitions/HLA-V_group1.fasta	../firstrun/newGeneCopies/HLA-V/HLA-V_partitions/HLA-V_group1_HLA-VOOOHCG4OOOHLA-P.fasta	HLA-V,HLA-P,HCG4,
../firstrun/newGeneCopies/PLXNA1/PLXNA1_partitions/PLXNA1_group1.fasta	../firstrun/newGeneCopies/PLXNA1/PLXNA1_partitions/PLXNA1_group1_PLXNA1.fasta	PLXNA1,
../firstrun/newGeneCopies/COX20/COX20_partitions/COX20_group1.fasta	../firstrun/newGeneCopies/COX20/COX20_partitions/COX20_group1_COX20OOOHNRNPUOOORP11-11N7v6.fasta	COX20,HNRNPU,RP11-11N7.6,
../firstrun/newGeneCopies/GYPE/GYPE_partitions/GYPE_group1.fasta	../firstrun/newGeneCopies/GYPE/GYPE_partitions/GYPE_group1_GYPEOOOGYPAOOOGYPB.fasta	RP11-1289C17.1,GYPE,GYPA,GYPB,RP11-673E1.5,RP11-673E1.1,
../firstrun/newGeneCopies/LIPT1/LIPT1_partitions/LIPT1_group1.fasta	../firstrun/newGeneCopies/LIPT1/LIPT1_partitions/LIPT1_group1_LIPT1OOOC2orf15OOOMITD1.fasta	RP11-111H13.1,MITD1,LIPT1,C2orf15,RP11-38C17.1,TSGA10,
../firstrun/newGeneCopies/HLA-A/HLA-A_partitions/HLA-A_group2.fasta	../firstrun/newGeneCopies/HLA-A/HLA-A_partitions/HLA-A_group2_HLA-AOOODDX39BP1OOODDX39BP2.fasta	MICD,HCG9,MCCD1P1,HCG4P8,HCG4P7,HLA-K,DDX39BP2,HLA-J,MICG,HCG4P3,HLA-T,HLA-U,HLA-V,HLA-W,HLA-G,HCG4P5,HCP5B,RPL7AP7,HLA-P,ZNRD1ASP,DDX39BP1,MCCD1P2,MICF,HLA-H,HCG4B,HLA-A,HCG4,
../firstrun/newGeneCopies/MCL1/MCL1_partitions/MCL1_group1.fasta	../firstrun/newGeneCopies/MCL1/MCL1_partitions/MCL1_group1_MCL1OOOADAMTSL4OOOADAMTSL4-AS1.fasta	RN7SL473P,ADAMTSL4-AS1,ADAMTSL4,RN7SL600P,MCL1,
../firstrun/newGeneCopies/CD83/CD83_partitions/CD83_group1.fasta	../firstrun/newGeneCopies/CD83/CD83_partitions/CD83_group1_CD83.fasta	CD83,
../firstrun/newGeneCopies/LTO1/LTO1_partitions/LTO1_group1.fasta	../firstrun/newGeneCopies/LTO1/LTO1_partitions/LTO1_group1_LTO1OOOCCND1.fasta	CCND1,LTO1,
../firstrun/newGeneCopies/GAGE/GAGE_partitions/GAGE_group1.fasta	../firstrun/newGeneCopies/GAGE/GAGE_partitions/GAGE_group1_GAGE1OOOGAGE10OOOGAGE12B.fasta	GAGE12C,GAGE12F,GAGE12G,GAGE12E,GAGE2A,GAGE12B,GAGE1,GAGE13,GAGE12H,PPP1R3F,GAGE12D,GAGE2E,GAGE10,GAGE12J,
../firstrun/newGeneCopies/ZNF728/ZNF728_partitions/ZNF728_group2.fasta	../firstrun/newGeneCopies/ZNF728/ZNF728_partitions/ZNF728_group2_ZNF728OOOBNIP3P28OOOBNIP3P30.fasta	ZNF208,BNIP3P28,BNIP3P36,ZNF676,BNIP3P30,ZNF728,
../firstrun/newGeneCopies/PNMA6/PNMA6_partitions/PNMA6_group1.fasta	../firstrun/newGeneCopies/PNMA6/PNMA6_partitions/PNMA6_group1_PNMA6FOOOPNMA5.fasta	PNMA6F,PNMA5,
../firstrun/newGeneCopies/PNMA6/PNMA6_partitions/PNMA6_group4.fasta	../firstrun/newGeneCopies/PNMA6/PNMA6_partitions/PNMA6_group4_PNMA6AOOOPNMA6B.fasta	PNMA6B,PNMA6A,
../firstrun/newGeneCopies/PTK6/PTK6_partitions/PTK6_group2.fasta	../firstrun/newGeneCopies/PTK6/PTK6_partitions/PTK6_group2_PTK6OOOSRMS.fasta	PTK6,SRMS,
../firstrun/newGeneCopies/DEFB118/DEFB118_partitions/DEFB118_group1.fasta	../firstrun/newGeneCopies/DEFB118/DEFB118_partitions/DEFB118_group1_DEFB118OOODEFB119OOOENSG10010135649v1.fasta	DEFB118,DEFB119,ENSG10010135649.1,
../firstrun/newGeneCopies/SMCR8/SMCR8_partitions/SMCR8_group1.fasta	../firstrun/newGeneCopies/SMCR8/SMCR8_partitions/SMCR8_group1_SMCR8OOORPL21P121OOORPL7AP65.fasta	TOP3A,RPL21P121,SHMT1,SMCR8,RPL7AP65,
../firstrun/newGeneCopies/CDC34/CDC34_partitions/CDC34_group1.fasta	../firstrun/newGeneCopies/CDC34/CDC34_partitions/CDC34_group1_CDC34OOOGZMM.fasta	GZMM,CDC34,
../firstrun/newGeneCopies/MCM2/MCM2_partitions/MCM2_group1.fasta	../firstrun/newGeneCopies/MCM2/MCM2_partitions/MCM2_group1_MCM2OOORP11-427I6v5OOOTPRA1.fasta	MCM2,TPRA1,RP11-427I6.5,
../firstrun/newGeneCopies/CES3/CES3_partitions/CES3_group12.fasta	../firstrun/newGeneCopies/CES3/CES3_partitions/CES3_group12_CES3OOORP11-361L15v4.fasta	RP11-361L15.4,CES3,
../firstrun/newGeneCopies/BAP1/BAP1_partitions/BAP1_group1.fasta	../firstrun/newGeneCopies/BAP1/BAP1_partitions/BAP1_group1_BAP1OOODNAH1OOOPHF7.fasta	PHF7,DNAH1,BAP1,
../firstrun/newGeneCopies/DCTPP1/DCTPP1_partitions/DCTPP1_group1.fasta	../firstrun/newGeneCopies/DCTPP1/DCTPP1_partitions/DCTPP1_group1_DCTPP1OOOSNORA80COOOZNF771.fasta	SNORA80C,DCTPP1,ZNF771,
../firstrun/newGeneCopies/PARVG/PARVG_partitions/PARVG_group1.fasta	../firstrun/newGeneCopies/PARVG/PARVG_partitions/PARVG_group1_PARVGOOOPARVBOOORP4-671O14v5.fasta	RP4-671O14.7,PARVB,RP4-671O14.5,PARVG,
../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group7.fasta	../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group7_SHANK2OOOSHANK2-AS3OOOMIR3664.fasta	MIR3664,SHANK2,SHANK2-AS3,
../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group13.fasta	../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group13_SHANK2.fasta	SHANK2,
../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group9.fasta	../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group9_SHANK2OOORP1-85D24v4.fasta	RP1-85D24.4,SHANK2,
../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group8.fasta	../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group8_SHANK2OOORP11-598K3v1.fasta	RP11-598K3.1,SHANK2,
../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group3.fasta	../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group3_SHANK2OOOSHANK2-AS1OOOSHANK2-AS2.fasta	Y_RNA,SHANK2-AS2,SHANK2,SHANK2-AS1,RP11-826F13.1,CMB9-52H4.1,
../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group2.fasta	../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group2_SHANK2OOOAP001271v3.fasta	SHANK2,AP001271.3,
../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group16.fasta	../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group16_SHANK3OOOAC000036v4OOOAC000050v1.fasta	AC002056.5,ENSG00000283243,ACR,RNU6-409P,SHANK3,AC000050.1,AC000036.4,ENSG00000287911,
../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group15.fasta	../firstrun/newGeneCopies/SHANK/SHANK_partitions/SHANK_group15_SHANK1OOOC19orf81.fasta	SHANK1,C19orf81,
../firstrun/newGeneCopies/ARAP/ARAP_partitions/ARAP_group3.fasta	../firstrun/newGeneCopies/ARAP/ARAP_partitions/ARAP_group3_ARAP2OOORP11-640B6v1.fasta	RP11-640B6.1,ARAP2,
../firstrun/newGeneCopies/ARAP/ARAP_partitions/ARAP_group1.fasta	../firstrun/newGeneCopies/ARAP/ARAP_partitions/ARAP_group1_ARAP2.fasta	ARAP2,
../firstrun/newGeneCopies/ARAP/ARAP_partitions/ARAP_group4.fasta	../firstrun/newGeneCopies/ARAP/ARAP_partitions/ARAP_group4_ARAP2OOORP11-431M7v3.fasta	RP11-431M7.3,ARAP2,
../firstrun/newGeneCopies/ARAP/ARAP_partitions/ARAP_group5.fasta	../firstrun/newGeneCopies/ARAP/ARAP_partitions/ARAP_group5_ARAP3OOOFCHSD1.fasta	ARAP3,FCHSD1,
../firstrun/newGeneCopies/CENPL/CENPL_partitions/CENPL_group1.fasta	../firstrun/newGeneCopies/CENPL/CENPL_partitions/CENPL_group1_CENPLOOODARS2OOOY_RNA.fasta	DARS2,CENPL,Y_RNA,
../firstrun/newGeneCopies/CD99/CD99_partitions/CD99_group2.fasta	../firstrun/newGeneCopies/CD99/CD99_partitions/CD99_group2_CD99.fasta	CD99,
../firstrun/newGeneCopies/DOCK8/DOCK8_partitions/DOCK8_group1.fasta	../firstrun/newGeneCopies/DOCK8/DOCK8_partitions/DOCK8_group1_DOCK8OOODOCK8-AS1OOORP11-165F24v3.fasta	DOCK8,RP11-165F24.3,RP11-59O6.3,DOCK8-AS1,RP11-174M15.1,
../firstrun/newGeneCopies/CCN5/CCN5_partitions/CCN5_group1.fasta	../firstrun/newGeneCopies/CCN5/CCN5_partitions/CCN5_group1_CCN5OOOKCNK15-AS1.fasta	CCN5,KCNK15-AS1,
../firstrun/newGeneCopies/SLC27A5/SLC27A5_partitions/SLC27A5_group19.fasta	../firstrun/newGeneCopies/SLC27A5/SLC27A5_partitions/SLC27A5_group19_SLC27A5OOOCTD-2619J13v27OOORN7SL693P.fasta	CTD-2619J13.27,RN7SL693P,RNU6-1337P,ZBTB45,SLC27A5,ZNF446,
../firstrun/newGeneCopies/MRO/MRO_partitions/MRO_group17.fasta	../firstrun/newGeneCopies/MRO/MRO_partitions/MRO_group17_MROOOOHNRNPA3P16OOORPL17P46.fasta	MRO,HNRNPA3P16,RPL17P46,
../firstrun/newGeneCopies/TRIR/TRIR_partitions/TRIR_group1.fasta	../firstrun/newGeneCopies/TRIR/TRIR_partitions/TRIR_group1_TRIROOOCTD-2659N19v4OOOGET3.fasta	TRIR,CTD-2659N19.4,GET3,
../firstrun/newGeneCopies/FLII/FLII_partitions/FLII_group1.fasta	../firstrun/newGeneCopies/FLII/FLII_partitions/FLII_group1_FLIIOOOLLGL1OOOMIEF2.fasta	MIEF2,FLII,LLGL1,
../firstrun/newGeneCopies/UBA1/UBA1_partitions/UBA1_group1.fasta	../firstrun/newGeneCopies/UBA1/UBA1_partitions/UBA1_group1_UBA1OOOCDK16OOOINE1.fasta	INE1,UBA1,CDK16,
../firstrun/newGeneCopies/ARHGEF35/ARHGEF35_partitions/ARHGEF35_group3.fasta	../firstrun/newGeneCopies/ARHGEF35/ARHGEF35_partitions/ARHGEF35_group3_ARHGEF35OOOARHGEF35-AS1OOOAC073264v6.fasta	ENSG00000284912,ARHGEF5,ENSG00000288136,OR2A7,RNU6-162P,AC073264.6,RNU6-267P,ARHGEF35,OR2A20P,ENPP3,ENSG00000285013,CTAGE9,ENSG00000285154,ENSG00000285059,ARHGEF35-AS1,ENSG00000285408,CTAGE15,OR2A1,ENSG00000285362,CTAGE6,ENSG00000284827,OR2A9P,RP4-798C17.7,CTAGE4,OR2A1-AS1,OR2A42,ARHGEF34P,OR2A4,CTAGE8,
../firstrun/newGeneCopies/CLIP2/CLIP2_partitions/CLIP2_group1.fasta	../firstrun/newGeneCopies/CLIP2/CLIP2_partitions/CLIP2_group1_CLIP2OOOCTA-270D13v1.fasta	CLIP2,CTA-270D13.1,
../firstrun/newGeneCopies/CLPS/CLPS_partitions/CLPS_group1.fasta	../firstrun/newGeneCopies/CLPS/CLPS_partitions/CLPS_group1_CLPSOOOCLPSL1OOOCLPSL2.fasta	CLPS,CLPSL1,LHFPL5,CLPSL2,
../firstrun/newGeneCopies/FUCA2/FUCA2_partitions/FUCA2_group1.fasta	../firstrun/newGeneCopies/FUCA2/FUCA2_partitions/FUCA2_group1_FUCA2OOORP1-20N2v8OOOVDAC1P8.fasta	FUCA2,RP1-20N2.8,VDAC1P8,
../firstrun/newGeneCopies/MMP2/MMP2_partitions/MMP2_group1.fasta	../firstrun/newGeneCopies/MMP2/MMP2_partitions/MMP2_group1_MMP2OOOMMP2-AS1OOOLPCAT2.fasta	MMP2,LPCAT2,MMP2-AS1,RP11-212I21.5,RP11-212I21.3,
../firstrun/newGeneCopies/USP14/USP14_partitions/USP14_group1.fasta	../firstrun/newGeneCopies/USP14/USP14_partitions/USP14_group1_USP14OOOTHOC1.fasta	USP14,THOC1,
../firstrun/newGeneCopies/BDP1/BDP1_partitions/BDP1_group2.fasta	../firstrun/newGeneCopies/BDP1/BDP1_partitions/BDP1_group2_BDP1OOOHMGN1P12.fasta	HMGN1P12,BDP1,
../firstrun/newGeneCopies/BDP1/BDP1_partitions/BDP1_group1.fasta	../firstrun/newGeneCopies/BDP1/BDP1_partitions/BDP1_group1_BDP1OOORP11-1174L13v2.fasta	RP11-1174L13.2,BDP1,
../firstrun/newGeneCopies/SEMA3G/SEMA3G_partitions/SEMA3G_group1.fasta	../firstrun/newGeneCopies/SEMA3G/SEMA3G_partitions/SEMA3G_group1_SEMA3G.fasta	SEMA3G,
../firstrun/newGeneCopies/CYP46A1/CYP46A1_partitions/CYP46A1_group3.fasta	../firstrun/newGeneCopies/CYP46A1/CYP46A1_partitions/CYP46A1_group3_CYP46A1.fasta	CYP46A1,
../firstrun/newGeneCopies/CYP46A1/CYP46A1_partitions/CYP46A1_group2.fasta	../firstrun/newGeneCopies/CYP46A1/CYP46A1_partitions/CYP46A1_group2_CYP46A1OOORP11-543C4v3.fasta	CYP46A1,RP11-543C4.3,
../firstrun/newGeneCopies/SMAD7/SMAD7_partitions/SMAD7_group1.fasta	../firstrun/newGeneCopies/SMAD7/SMAD7_partitions/SMAD7_group1_SMAD7.fasta	SMAD7,
../firstrun/newGeneCopies/SEC22B/SEC22B_partitions/SEC22B_group9.fasta	../firstrun/newGeneCopies/SEC22B/SEC22B_partitions/SEC22B_group9_SEC22BOOOSEC22B2POOOSEC22B3P.fasta	CH17-3B23.3,RNVU1-14,LINC01138,RNVU1-18,RNU1-155P,RNVU1-15,RNVU1-29,PPIAL4F,NBPF15,RNVU1-2,RP11-763B22.3,MIR6077,SEC22B3P,RNVU1-19,RNVU1-27,U1,NBPF26,PPIAL4H,RNVU1-23,PPIAL4A,RP5-1135M2.2,RNVU1-28,SEC22B4P,CH17-408M7.2,CH17-373J23.1,RP11-269M20.1,RP11-763B22.4,RNVU1-26,SEC22B2P,RP11-89F3.2,NBPF14,SEC22B,NBPF20,RP5-1135M2.1,RNVU1-2A,
../firstrun/newGeneCopies/SNURF/SNURF_partitions/SNURF_group1.fasta	../firstrun/newGeneCopies/SNURF/SNURF_partitions/SNURF_group1_SNURFOOORP11-701H24v9OOOSNHG14.fasta	SNURF,SNHG14,SNRPN,RP11-701H24.9,
../firstrun/newGeneCopies/RP11-353J17.5/RP11-353J17.5_partitions/RP11-353J17.5_group1.fasta	../firstrun/newGeneCopies/RP11-353J17.5/RP11-353J17.5_partitions/RP11-353J17.5_group1_RP11-353J17v5OOONXF2OOONXF2B.fasta	NXF5,NXF2B,RP11-353J17.5,NXF4,NXF2,
../firstrun/newGeneCopies/ITGAX/ITGAX_partitions/ITGAX_group2.fasta	../firstrun/newGeneCopies/ITGAX/ITGAX_partitions/ITGAX_group2_ITGAXOOORP11-120K18v3.fasta	ITGAX,RP11-120K18.3,
../firstrun/newGeneCopies/SGSH/SGSH_partitions/SGSH_group1.fasta	../firstrun/newGeneCopies/SGSH/SGSH_partitions/SGSH_group1_SGSHOOOCARD14OOORP11-334C17v5.fasta	SGSH,SLC26A11,RP11-334C17.5,CARD14,
../firstrun/newGeneCopies/SPANXC/SPANXC_partitions/SPANXC_group2.fasta	../firstrun/newGeneCopies/SPANXC/SPANXC_partitions/SPANXC_group2_SPANXCOOORP11-298A8v2OOOSPANXA1.fasta	SPANXD,SPANXB1,SPANXA1,RP11-298A8.2,SPANXC,SPANXA2,SPANXA2-OT1,
../firstrun/newGeneCopies/CHRNA4/CHRNA4_partitions/CHRNA4_group1.fasta	../firstrun/newGeneCopies/CHRNA4/CHRNA4_partitions/CHRNA4_group1_CHRNA4OOORP11-261N11v8.fasta	CHRNA4,RP11-261N11.8,
../firstrun/newGeneCopies/PITHD1/PITHD1_partitions/PITHD1_group1.fasta	../firstrun/newGeneCopies/PITHD1/PITHD1_partitions/PITHD1_group1_PITHD1OOOELOA-AS1OOOLYPLA2.fasta	LYPLA2,ELOA-AS1,PITHD1,
../firstrun/newGeneCopies/CFAP45/CFAP45_partitions/CFAP45_group1.fasta	../firstrun/newGeneCopies/CFAP45/CFAP45_partitions/CFAP45_group1_CFAP45OOOMIR4259OOORP11-190A12v11.fasta	RP11-190A12.11,CFAP45,RP11-190A12.7,MIR4259,
../firstrun/newGeneCopies/FBXL15/FBXL15_partitions/FBXL15_group1.fasta	../firstrun/newGeneCopies/FBXL15/FBXL15_partitions/FBXL15_group1_FBXL15OOOCUEDC2OOOPSD.fasta	FBXL15,CUEDC2,PSD,
../firstrun/newGeneCopies/EML2/EML2_partitions/EML2_group2.fasta	../firstrun/newGeneCopies/EML2/EML2_partitions/EML2_group2_EML2OOOEML2-AS1OOOMIR330.fasta	MIR330,EML2-AS1,EML2,RN7SL836P,
../firstrun/newGeneCopies/TMEM240/TMEM240_partitions/TMEM240_group4.fasta	../firstrun/newGeneCopies/TMEM240/TMEM240_partitions/TMEM240_group4_TMEM240OOOATAD3AOOOSSU72.fasta	TMEM240,SSU72,ATAD3A,
../firstrun/newGeneCopies/RUVBL1/RUVBL1_partitions/RUVBL1_group1.fasta	../firstrun/newGeneCopies/RUVBL1/RUVBL1_partitions/RUVBL1_group1_RUVBL1OOORUVBL1-AS1OOOEEFSEC.fasta	RUVBL1-AS1,RNU6-823P,SEC61A1,RNU2-37P,EEFSEC,RUVBL1,
../firstrun/newGeneCopies/PEX5/PEX5_partitions/PEX5_group5.fasta	../firstrun/newGeneCopies/PEX5/PEX5_partitions/PEX5_group5_PEX5OOORP11-273B20v3.fasta	RP11-273B20.3,PEX5,
../firstrun/newGeneCopies/PCDHGB/PCDHGB_partitions/PCDHGB_group1.fasta	../firstrun/newGeneCopies/PCDHGB/PCDHGB_partitions/PCDHGB_group1_PCDHGB1OOOPCDHGB2OOOPCDHGB3.fasta	RN7SL68P,PCDHGA5,PCDHGB9P,PCDHGB2,PCDHGB1,PCDHGB4,PCDHGA4,CTD-2024I7.18,PCDHGA10,PCDHGA8,DIAPH1,PCDHGB5,AC005618.8,PCDHGC3,PCDHGC5,PCDHGB3,PCDHGC4,PCDHGA7,PCDHGA6,PCDHGA2,PCDHGA3,AC005618.9,PCDHGB6,PCDHGB8P,PCDHGA12,PCDHGA9,PCDHGA11,PCDHGA1,PCDHGB7,
../firstrun/newGeneCopies/PAPSS2/PAPSS2_partitions/PAPSS2_group1.fasta	../firstrun/newGeneCopies/PAPSS2/PAPSS2_partitions/PAPSS2_group1_PAPSS2OOORP11-57C13v3OOORP11-57C13v6.fasta	PAPSS2,RP11-57C13.3,RP11-57C13.6,
../firstrun/newGeneCopies/TPX2/TPX2_partitions/TPX2_group1.fasta	../firstrun/newGeneCopies/TPX2/TPX2_partitions/TPX2_group1_TPX2.fasta	TPX2,
../firstrun/newGeneCopies/PCDHA10/PCDHA10_partitions/PCDHA10_group3.fasta	../firstrun/newGeneCopies/PCDHA10/PCDHA10_partitions/PCDHA10_group3_PCDHA10OOOAC005609v17OOOAC005609v18.fasta	PCDHA12,PCDHA9,PCDHA10,PCDHAC1,PCDHA14,PCDHA3,PCDHA8,AC005609.17,AC005609.18,PCDHA4,PCDHA1,PCDHA6,PCDHA7,PCDHA5,PCDHA2,AC005609.20,AC005609.19,PCDHA13,PCDHA11,
../firstrun/newGeneCopies/PCDHA10/PCDHA10_partitions/PCDHA10_group5.fasta	../firstrun/newGeneCopies/PCDHA10/PCDHA10_partitions/PCDHA10_group5_PCDHA10OOOCTC-270D5v2OOOPCDHA1.fasta	PCDHA12,PCDHA13,PCDHA4,PCDHA1,PCDHA6,PCDHA9,CTC-270D5.2,PCDHA7,PCDHA3,PCDHAC2,PCDHA8,PCDHA10,PCDHA5,PCDHAC1,PCDHA11,PCDHA2,
../firstrun/newGeneCopies/PCDHA10/PCDHA10_partitions/PCDHA10_group6.fasta	../firstrun/newGeneCopies/PCDHA10/PCDHA10_partitions/PCDHA10_group6_PCDHA10OOOPCDHA1OOOPCDHA11.fasta	PCDHA12,PCDHA13,PCDHA4,PCDHA1,PCDHA6,PCDHA9,PCDHA7,PCDHA3,PCDHAC2,PCDHA8,PCDHA10,PCDHA5,PCDHAC1,PCDHA11,PCDHA2,
../firstrun/newGeneCopies/ZNF420/ZNF420_partitions/ZNF420_group26.fasta	../firstrun/newGeneCopies/ZNF420/ZNF420_partitions/ZNF420_group26_ZNF420OOOCTC-454I21v3OOOCTC-454I21v4.fasta	CTC-454I21.4,ZNF585A,CTC-454I21.3,CTD-2293H3.3,CTD-2293H3.2,ZNF420,
../firstrun/newGeneCopies/SEC22C/SEC22C_partitions/SEC22C_group1.fasta	../firstrun/newGeneCopies/SEC22C/SEC22C_partitions/SEC22C_group1_SEC22COOONKTROOORP4-613B23v1.fasta	RP4-613B23.1,NKTR,SEC22C,SS18L2,
../firstrun/newGeneCopies/SSTR5/SSTR5_partitions/SSTR5_group1.fasta	../firstrun/newGeneCopies/SSTR5/SSTR5_partitions/SSTR5_group1_SSTR5OOOSSTR5-AS1OOORP11-161M6v5.fasta	SSTR5-AS1,SSTR5,RP11-161M6.5,
../firstrun/newGeneCopies/RP1-321E8.5/RP1-321E8.5_partitions/RP1-321E8.5_group1.fasta	../firstrun/newGeneCopies/RP1-321E8.5/RP1-321E8.5_partitions/RP1-321E8.5_group1_RP1-321E8v5OOOCT47A1OOOCT47A10.fasta	CT47A10,RP1-321E8.4,CT47A5,CT47A3,RP6-166C19.13,RP6-166C19.20,CT47A9,RP1-321E8.5,RP6-166C19.18,RP6-166C19.14,CT47A11,RP6-166C19.12,RP6-166C19.21,CT47A2,CT47A1,CT47A12,CT47A8,CT47A7,RP6-166C19.17,RP6-166C19.15,RP6-166C19.23,RP6-166C19.16,CT47B1,CT47A4,PA2G4P1,RP6-166C19.19,CT47A6,RP6-166C19.22,
../firstrun/newGeneCopies/ZNF570/ZNF570_partitions/ZNF570_group1.fasta	../firstrun/newGeneCopies/ZNF570/ZNF570_partitions/ZNF570_group1_ZNF570OOOZNF569.fasta	ZNF569,ZNF570,
../firstrun/newGeneCopies/GDF2/GDF2_partitions/GDF2_group1.fasta	../firstrun/newGeneCopies/GDF2/GDF2_partitions/GDF2_group1_GDF2.fasta	GDF2,
../firstrun/newGeneCopies/LGALS/LGALS_partitions/LGALS_group12.fasta	../firstrun/newGeneCopies/LGALS/LGALS_partitions/LGALS_group12_LGALS4OOOLGALS7OOOLGALS7B.fasta	LGALS7B,RNU6-140P,CAPN12,AC104534.2,LGALS4,LGALS7,AC104534.3,ECH1,
../firstrun/newGeneCopies/LGALS/LGALS_partitions/LGALS_group6.fasta	../firstrun/newGeneCopies/LGALS/LGALS_partitions/LGALS_group6_LGALS9OOOLGALS9BOOOLGALS9C.fasta	NOS2P2,LGALS9,NOS2P1,NOS2P3,AC015688.3,LGALS9DP,KRT16P4,RP11-434D2.13,LGALS9B,NOS2,LGALS9C,
../firstrun/newGeneCopies/LGALS/LGALS_partitions/LGALS_group17.fasta	../firstrun/newGeneCopies/LGALS/LGALS_partitions/LGALS_group17_LGALS2OOOCDC42EP1OOOMetazoa_SRP.fasta	CDC42EP1,LGALS2,Metazoa_SRP,
../firstrun/newGeneCopies/SEMA4A/SEMA4A_partitions/SEMA4A_group7.fasta	../firstrun/newGeneCopies/SEMA4A/SEMA4A_partitions/SEMA4A_group7_SEMA4A.fasta	SEMA4A,
../firstrun/newGeneCopies/CRYAA/CRYAA_partitions/CRYAA_group152.fasta	../firstrun/newGeneCopies/CRYAA/CRYAA_partitions/CRYAA_group152_CRYAAOOOCRYAA2OOOAP001631v10.fasta	CH507-152C13.6,U2AF1L5,CH507-152C13.4,CRYAA,MRPL51P2,AP001631.10,U2AF1,CH507-152C13.5,FRGCA,CRYAA2,KB-2007G4.1,
../firstrun/newGeneCopies/KRT34/KRT34_partitions/KRT34_group1.fasta	../firstrun/newGeneCopies/KRT34/KRT34_partitions/KRT34_group1_KRT34OOOAC003958v2OOOAC004231v7.fasta	AC004231.7,KRT34,KRT33A,KRT31,KRT33B,AC003958.2,
../firstrun/newGeneCopies/LCNL1/LCNL1_partitions/LCNL1_group1.fasta	../firstrun/newGeneCopies/LCNL1/LCNL1_partitions/LCNL1_group1_LCNL1OOOPTGDSOOORP11-229P13v28.fasta	LCNL1,PTGDS,RP11-229P13.28,
../firstrun/newGeneCopies/PRPSAP2/PRPSAP2_partitions/PRPSAP2_group1.fasta	../firstrun/newGeneCopies/PRPSAP2/PRPSAP2_partitions/PRPSAP2_group1_PRPSAP2OOOAC090286v2OOOAC107982v4.fasta	CCDC144A,RN7SL627P,CCDC144CP,AC090286.2,Metazoa_SRP,CTD-2145A24.4,RN7SL620P,CCDC144B,PRPSAP2,RP11-219A15.1,AC107982.4,
../firstrun/newGeneCopies/FGD4/FGD4_partitions/FGD4_group37.fasta	../firstrun/newGeneCopies/FGD4/FGD4_partitions/FGD4_group37_FGD4.fasta	FGD4,
../firstrun/newGeneCopies/FGD4/FGD4_partitions/FGD4_group35.fasta	../firstrun/newGeneCopies/FGD4/FGD4_partitions/FGD4_group35_FGD4OOORNU6-494POOOY_RNA.fasta	Y_RNA,FGD4,RNU6-494P,
../firstrun/newGeneCopies/ZNF736/ZNF736_partitions/ZNF736_group2.fasta	../firstrun/newGeneCopies/ZNF736/ZNF736_partitions/ZNF736_group2_ZNF736OOORP11-10F11v2OOORP11-3N2v15.fasta	ZNF727,RP11-3N2.15,RP11-10F11.2,RP11-3N2.16,ZNF736,TRIM60P17,TRIM60P16,TRIM60P18,
../firstrun/newGeneCopies/IMP4/IMP4_partitions/IMP4_group1.fasta	../firstrun/newGeneCopies/IMP4/IMP4_partitions/IMP4_group1_IMP4OOOCCDC115.fasta	CCDC115,IMP4,
../firstrun/newGeneCopies/TAF11/TAF11_partitions/TAF11_group6.fasta	../firstrun/newGeneCopies/TAF11/TAF11_partitions/TAF11_group6_TAF11OOOANKS1AOOOUHRF1BP1.fasta	TAF11,ANKS1A,UHRF1BP1,
../firstrun/newGeneCopies/TAF11/TAF11_partitions/TAF11_group1.fasta	../firstrun/newGeneCopies/TAF11/TAF11_partitions/TAF11_group1_TAF11L10OOOTAF11L11OOOTAF11L12.fasta	TAF11L14,RP11-432M8.14,RP11-432M8.1,TAF11L3,TAF11L5,H3Y2,RP11-432M8.15,TAF11L12,RP11-432M8.18,TAF11L6,RP11-321E2.12,TAF11L8,TAF11L7,RP11-432M8.16,TAF11L9,H3P17,TAF11L13,LINC02218,TAF11L11,TAF11L2,TAF11L10,RP11-432M8.6,RP11-432M8.7,H3Y1,TAF11L4,
../firstrun/newGeneCopies/IGHG3/IGHG3_partitions/IGHG3_group1.fasta	../firstrun/newGeneCopies/IGHG3/IGHG3_partitions/IGHG3_group1_IGHG3OOOCOPDA1OOOELK2AP.fasta	IGHG4,ELK2AP,IGHG2,MIR8071-2,IGHGP,IGHG1,MIR8071-1,IGHG3,COPDA1,
../firstrun/newGeneCopies/ZAN/ZAN_partitions/ZAN_group5.fasta	../firstrun/newGeneCopies/ZAN/ZAN_partitions/ZAN_group5_ZAN.fasta	ZAN,
../firstrun/newGeneCopies/RP11-330H6.5/RP11-330H6.5_partitions/RP11-330H6.5_group1.fasta	../firstrun/newGeneCopies/RP11-330H6.5/RP11-330H6.5_partitions/RP11-330H6.5_group1_RP11-330H6v5OOORP11-330H6v6OOOTLR9.fasta	TWF2,RP11-330H6.5,RP11-330H6.6,TLR9,
../firstrun/newGeneCopies/PTGER3/PTGER3_partitions/PTGER3_group4.fasta	../firstrun/newGeneCopies/PTGER3/PTGER3_partitions/PTGER3_group4_PTGER3OOORP3-333A15v2OOOZRANB2-AS1.fasta	ZRANB2-AS1,RP3-333A15.2,PTGER3,
../firstrun/newGeneCopies/PTGER3/PTGER3_partitions/PTGER3_group2.fasta	../firstrun/newGeneCopies/PTGER3/PTGER3_partitions/PTGER3_group2_PTGER3.fasta	PTGER3,
../firstrun/newGeneCopies/PTGER3/PTGER3_partitions/PTGER3_group3.fasta	../firstrun/newGeneCopies/PTGER3/PTGER3_partitions/PTGER3_group3_PTGER3.fasta	PTGER3,
../firstrun/newGeneCopies/CARD10/CARD10_partitions/CARD10_group1.fasta	../firstrun/newGeneCopies/CARD10/CARD10_partitions/CARD10_group1_CARD10.fasta	CARD10,
../firstrun/newGeneCopies/PIGV/PIGV_partitions/PIGV_group1.fasta	../firstrun/newGeneCopies/PIGV/PIGV_partitions/PIGV_group1_PIGV.fasta	PIGV,
../firstrun/newGeneCopies/LAGE3/LAGE3_partitions/LAGE3_group3.fasta	../firstrun/newGeneCopies/LAGE3/LAGE3_partitions/LAGE3_group3_LAGE3OOOPLXNA3OOOUBL4A.fasta	LAGE3,PLXNA3,UBL4A,
../firstrun/newGeneCopies/JAG2/JAG2_partitions/JAG2_group1.fasta	../firstrun/newGeneCopies/JAG2/JAG2_partitions/JAG2_group1_JAG2OOOMIR6765OOORP11-44N21v4.fasta	MIR6765,RP11-44N21.4,JAG2,
../firstrun/newGeneCopies/FAM166/FAM166_partitions/FAM166_group8.fasta	../firstrun/newGeneCopies/FAM166/FAM166_partitions/FAM166_group8_FAM166AOOOSTPG3OOOSTPG3-AS1.fasta	FAM166A,STPG3-AS1,TUBB4B,STPG3,
../firstrun/newGeneCopies/MAGEA2/MAGEA2_partitions/MAGEA2_group1.fasta	../firstrun/newGeneCopies/MAGEA2/MAGEA2_partitions/MAGEA2_group1_MAGEA2OOOMAGEA2BOOOCSAG1.fasta	CSAG4,CSAG1,CSAG2,MAGEA6,MAGEA3,MAGEA6-DT,RP1-14D6.13,MAGEA2,CSAG3,MAGEA12,RP1-14D6.7,MAGEA2B,
../firstrun/newGeneCopies/FAT1/FAT1_partitions/FAT1_group1.fasta	../firstrun/newGeneCopies/FAT1/FAT1_partitions/FAT1_group1_FAT1OOORP11-182A9v1.fasta	RP11-182A9.1,FAT1,
../firstrun/newGeneCopies/MRPS31/MRPS31_partitions/MRPS31_group5.fasta	../firstrun/newGeneCopies/MRPS31/MRPS31_partitions/MRPS31_group5_MRPS31OOOMRPS31P2OOOCASC4P1.fasta	LINC00350,ESRRAP2,MRPS31P2,MRPS31,RP11-557B9.1,MIR320D1,ESRRAP1,CASC4P1,Metazoa_SRP,
../firstrun/newGeneCopies/PLEK/PLEK_partitions/PLEK_group1.fasta	../firstrun/newGeneCopies/PLEK/PLEK_partitions/PLEK_group1_PLEKOOOAC015969v3.fasta	PLEK,AC015969.3,
../firstrun/newGeneCopies/KBTBD12/KBTBD12_partitions/KBTBD12_group1.fasta	../firstrun/newGeneCopies/KBTBD12/KBTBD12_partitions/KBTBD12_group1_KBTBD12OOOMGLL.fasta	MGLL,KBTBD12,
../firstrun/newGeneCopies/KBTBD12/KBTBD12_partitions/KBTBD12_group2.fasta	../firstrun/newGeneCopies/KBTBD12/KBTBD12_partitions/KBTBD12_group2_KBTBD12OOOMGLLOOORNA5SP139.fasta	MGLL,RNA5SP139,KBTBD12,
../firstrun/newGeneCopies/SNX12/SNX12_partitions/SNX12_group1.fasta	../firstrun/newGeneCopies/SNX12/SNX12_partitions/SNX12_group1_SNX12.fasta	SNX12,
../firstrun/newGeneCopies/TRPM1/TRPM1_partitions/TRPM1_group1.fasta	../firstrun/newGeneCopies/TRPM1/TRPM1_partitions/TRPM1_group1_TRPM1OOORP11-348B17v1.fasta	RP11-348B17.1,TRPM1,
../firstrun/newGeneCopies/TRPM1/TRPM1_partitions/TRPM1_group2.fasta	../firstrun/newGeneCopies/TRPM1/TRPM1_partitions/TRPM1_group2_TRPM1OOOMIR211OOORP11-348B17v1.fasta	RP11-348B17.1,MIR211,TRPM1,
../firstrun/newGeneCopies/HAO2/HAO2_partitions/HAO2_group1.fasta	../firstrun/newGeneCopies/HAO2/HAO2_partitions/HAO2_group1_HAO2OOOHAO2-IT1.fasta	HAO2,HAO2-IT1,
../firstrun/newGeneCopies/XKR/XKR_partitions/XKR_group3.fasta	../firstrun/newGeneCopies/XKR/XKR_partitions/XKR_group3_XKR5OOOGS1-24F4v2.fasta	XKR5,GS1-24F4.2,
../firstrun/newGeneCopies/XKR/XKR_partitions/XKR_group26.fasta	../firstrun/newGeneCopies/XKR/XKR_partitions/XKR_group26_XKR3OOOHSFY1P1.fasta	HSFY1P1,XKR3,
../firstrun/newGeneCopies/XKR/XKR_partitions/XKR_group1.fasta	../firstrun/newGeneCopies/XKR/XKR_partitions/XKR_group1_XKR8OOOEYA3OOORBAK-RBAKDN.fasta	RNF216P1,SMPDL3B,RP11-460I13.2,RP11-730B22.5,XKR8,RBAK-RBAKDN,EYA3,
../firstrun/newGeneCopies/XKR/XKR_partitions/XKR_group23.fasta	../firstrun/newGeneCopies/XKR/XKR_partitions/XKR_group23_XKR7OOOCCM2LOOORNA5SP481.fasta	RP1-310O13.7,CCM2L,RNA5SP481,RP1-310O13.13,XKR7,
../firstrun/newGeneCopies/CCL3/CCL3_partitions/CCL3_group1.fasta	../firstrun/newGeneCopies/CCL3/CCL3_partitions/CCL3_group1_CCL3OOOCCL3-AS1OOOCCL3L1.fasta	CCL3,CCL18,CCL3-AS1,AC131056.3,CH17-8C20.5,CCL3L3,CCL3L1,
../firstrun/newGeneCopies/RAB23/RAB23_partitions/RAB23_group1.fasta	../firstrun/newGeneCopies/RAB23/RAB23_partitions/RAB23_group1_RAB23OOOBAG2.fasta	RAB23,BAG2,
../firstrun/newGeneCopies/INSL3/INSL3_partitions/INSL3_group1.fasta	../firstrun/newGeneCopies/INSL3/INSL3_partitions/INSL3_group1_INSL3OOOB3GNT3OOOJAK3.fasta	JAK3,B3GNT3,INSL3,
../firstrun/newGeneCopies/CATSPER/CATSPER_partitions/CATSPER_group12.fasta	../firstrun/newGeneCopies/CATSPER/CATSPER_partitions/CATSPER_group12_CATSPER1.fasta	CATSPER1,
../firstrun/newGeneCopies/CATSPER/CATSPER_partitions/CATSPER_group2.fasta	../firstrun/newGeneCopies/CATSPER/CATSPER_partitions/CATSPER_group2_CATSPEREOOOADSS2OOOCYCSP5.fasta	ADSS2,CYCSP5,CATSPERE,
../firstrun/newGeneCopies/CATSPER/CATSPER_partitions/CATSPER_group23.fasta	../firstrun/newGeneCopies/CATSPER/CATSPER_partitions/CATSPER_group23_CATSPERGOOOAC005625v1.fasta	CATSPERG,AC005625.1,
../firstrun/newGeneCopies/CATSPER/CATSPER_partitions/CATSPER_group18.fasta	../firstrun/newGeneCopies/CATSPER/CATSPER_partitions/CATSPER_group18_CATSPER2OOOCATSPER2P1OOOAC011330v13.fasta	AC011330.5,RNU6-610P,RNU6-354P,PPIP5K1,PDIA3,CATSPER2,AC011330.13,CATSPER2P1,PDIA3P2,RP11-315A19.1,
../firstrun/newGeneCopies/EHHADH/EHHADH_partitions/EHHADH_group1.fasta	../firstrun/newGeneCopies/EHHADH/EHHADH_partitions/EHHADH_group1_EHHADHOOOEHHADH-AS1OOOEIF2S2P2.fasta	EHHADH,EIF2S2P2,MIR5588,EHHADH-AS1,
../firstrun/newGeneCopies/EHHADH/EHHADH_partitions/EHHADH_group3.fasta	../firstrun/newGeneCopies/EHHADH/EHHADH_partitions/EHHADH_group3_EHHADHOOOMAP3K13.fasta	EHHADH,MAP3K13,
../firstrun/newGeneCopies/ESRRA/ESRRA_partitions/ESRRA_group1.fasta	../firstrun/newGeneCopies/ESRRA/ESRRA_partitions/ESRRA_group1_ESRRAOOOCATSPERZOOOKCNK4-TEX40.fasta	PRDX5,TRMT112,CATSPERZ,KCNK4-TEX40,ESRRA,
../firstrun/newGeneCopies/OVOL1/OVOL1_partitions/OVOL1_group1.fasta	../firstrun/newGeneCopies/OVOL1/OVOL1_partitions/OVOL1_group1_OVOL1OOOOVOL1-AS1OOORP11-770G2v5.fasta	RP11-770G2.5,OVOL1-AS1,OVOL1,
../firstrun/newGeneCopies/VAMP7/VAMP7_partitions/VAMP7_group1.fasta	../firstrun/newGeneCopies/VAMP7/VAMP7_partitions/VAMP7_group1_VAMP7.fasta	VAMP7,
../firstrun/newGeneCopies/LMNTD2/LMNTD2_partitions/LMNTD2_group1.fasta	../firstrun/newGeneCopies/LMNTD2/LMNTD2_partitions/LMNTD2_group1_LMNTD2OOOLMNTD2-AS1OOOLRRC56.fasta	LMNTD2,LMNTD2-AS1,RASSF7,LRRC56,
../firstrun/newGeneCopies/SOHLH1/SOHLH1_partitions/SOHLH1_group1.fasta	../firstrun/newGeneCopies/SOHLH1/SOHLH1_partitions/SOHLH1_group1_SOHLH1OOOKCNT1.fasta	KCNT1,SOHLH1,
../firstrun/newGeneCopies/CRCP/CRCP_partitions/CRCP_group1.fasta	../firstrun/newGeneCopies/CRCP/CRCP_partitions/CRCP_group1_CRCPOOOAC068533v7OOORP5-1132H15v1.fasta	RP5-1132H15.3,AC068533.7,RP5-1132H15.1,CRCP,
../firstrun/newGeneCopies/SNX32/SNX32_partitions/SNX32_group1.fasta	../firstrun/newGeneCopies/SNX32/SNX32_partitions/SNX32_group1_SNX32OOOCFL1OOOMUS81.fasta	CFL1,MUS81,SNX32,
../firstrun/newGeneCopies/ABC7/ABC7_partitions/ABC7_group32.fasta	../firstrun/newGeneCopies/ABC7/ABC7_partitions/ABC7_group32_ABC7-42404400C24v1OOONUTM2A-AS1OOORP11-322M19v4.fasta	RP11-38L15.3,SYT15,ABC7-42404400C24.1,RP11-322M19.5,RP11-38L15.2,RP11-322M19.4,NUTM2A-AS1,
../firstrun/newGeneCopies/ZNF91/ZNF91_partitions/ZNF91_group5.fasta	../firstrun/newGeneCopies/ZNF91/ZNF91_partitions/ZNF91_group5_ZNF91.fasta	ZNF91,
../firstrun/newGeneCopies/ASXL1/ASXL1_partitions/ASXL1_group1.fasta	../firstrun/newGeneCopies/ASXL1/ASXL1_partitions/ASXL1_group1_ASXL1OOORP11-358N2v2.fasta	RP11-358N2.2,ASXL1,
../firstrun/newGeneCopies/PDRG1/PDRG1_partitions/PDRG1_group1.fasta	../firstrun/newGeneCopies/PDRG1/PDRG1_partitions/PDRG1_group1_PDRG1OOOTTLL9.fasta	PDRG1,TTLL9,
../firstrun/newGeneCopies/DMBT1/DMBT1_partitions/DMBT1_group1.fasta	../firstrun/newGeneCopies/DMBT1/DMBT1_partitions/DMBT1_group1_DMBT1.fasta	DMBT1,
../firstrun/newGeneCopies/CCS/CCS_partitions/CCS_group29.fasta	../firstrun/newGeneCopies/CCS/CCS_partitions/CCS_group29_CCSOOOCCDC87.fasta	CCS,CCDC87,
../firstrun/newGeneCopies/IZUMO1/IZUMO1_partitions/IZUMO1_group2.fasta	../firstrun/newGeneCopies/IZUMO1/IZUMO1_partitions/IZUMO1_group2_IZUMO1OOOFUT1OOORASIP1.fasta	FUT1,IZUMO1,RASIP1,
../firstrun/newGeneCopies/RP11-178L8.4/RP11-178L8.4_partitions/RP11-178L8.4_group1.fasta	../firstrun/newGeneCopies/RP11-178L8.4/RP11-178L8.4_partitions/RP11-178L8.4_group1_RP11-178L8v4OOOC16orf95OOOC16orf95-DT.fasta	FBXO31,RP11-178L8.8,C16orf95,RP11-178L8.4,C16orf95-DT,
../firstrun/newGeneCopies/SPANXA/SPANXA_partitions/SPANXA_group3.fasta	../firstrun/newGeneCopies/SPANXA/SPANXA_partitions/SPANXA_group3_SPANXA1OOOSPANXA2OOOSPANXA2-OT1.fasta	LDOC1,RNU6-3P,SPANXA2,SPANXD,RP1-171K16.5,NDUFB3P5,RBMX2P2,SPANXA2-OT1,SPANXC,SPANXB1,RP11-298A8.2,SPANXA1,
../firstrun/newGeneCopies/SELENBP1/SELENBP1_partitions/SELENBP1_group1.fasta	../firstrun/newGeneCopies/SELENBP1/SELENBP1_partitions/SELENBP1_group1_SELENBP1.fasta	SELENBP1,
../firstrun/newGeneCopies/ZNF419/ZNF419_partitions/ZNF419_group1.fasta	../firstrun/newGeneCopies/ZNF419/ZNF419_partitions/ZNF419_group1_ZNF419OOOAC003005v4OOOZNF773.fasta	AC003005.4,ZNF773,ZNF419,
../firstrun/newGeneCopies/RABGEF1/RABGEF1_partitions/RABGEF1_group1.fasta	../firstrun/newGeneCopies/RABGEF1/RABGEF1_partitions/RABGEF1_group1_RABGEF1OOOAC005077v7OOOAC005077v8.fasta	RABGEF1,RP11-792A8.3,AC005077.8,RP11-792A8.1,RP11-792A8.4,GTF2IP7,GS1-124K5.2,GS1-124K5.12,RP4-756H11.3,SKP1P1,LINC00174,RP11-792A8.5,GS1-124K5.13,TPST1,RP4-756H11.4,AC005077.7,GTF2IRD1P1,SAPCD2P3,
../firstrun/newGeneCopies/UQCRC2/UQCRC2_partitions/UQCRC2_group2.fasta	../firstrun/newGeneCopies/UQCRC2/UQCRC2_partitions/UQCRC2_group2_UQCRC2OOOCTD-2649C14v2OOOENSG00000284493.fasta	PDZD9,CTD-2649C14.2,UQCRC2,ENSG00000284493,
../firstrun/newGeneCopies/PAXX/PAXX_partitions/PAXX_group1.fasta	../firstrun/newGeneCopies/PAXX/PAXX_partitions/PAXX_group1_PAXXOOOCLIC3OOOLCNL1.fasta	LCNL1,CLIC3,PAXX,
../firstrun/newGeneCopies/ATP13A1/ATP13A1_partitions/ATP13A1_group1.fasta	../firstrun/newGeneCopies/ATP13A1/ATP13A1_partitions/ATP13A1_group1_ATP13A1OOOGMIP.fasta	GMIP,ATP13A1,
../firstrun/newGeneCopies/GPR42/GPR42_partitions/GPR42_group1.fasta	../firstrun/newGeneCopies/GPR42/GPR42_partitions/GPR42_group1_GPR42OOOFFAR1OOOFFAR3.fasta	GPR42,FFAR3,FFAR1,
../firstrun/newGeneCopies/NLGN4/NLGN4_partitions/NLGN4_group15.fasta	../firstrun/newGeneCopies/NLGN4/NLGN4_partitions/NLGN4_group15_NLGN4XOOONLGN4Y.fasta	NLGN4Y,NLGN4X,
../firstrun/newGeneCopies/NLGN4/NLGN4_partitions/NLGN4_group11.fasta	../firstrun/newGeneCopies/NLGN4/NLGN4_partitions/NLGN4_group11_NLGN4XOOONLGN4YOOOAGKP1.fasta	ENSG10010139407.1,NLGN4Y,AGKP1,NLGN4X,
../firstrun/newGeneCopies/NLGN4/NLGN4_partitions/NLGN4_group10.fasta	../firstrun/newGeneCopies/NLGN4/NLGN4_partitions/NLGN4_group10_NLGN4Y.fasta	NLGN4Y,
../firstrun/newGeneCopies/NLGN4/NLGN4_partitions/NLGN4_group25.fasta	../firstrun/newGeneCopies/NLGN4/NLGN4_partitions/NLGN4_group25_NLGN4X.fasta	NLGN4X,
../firstrun/newGeneCopies/NLGN4/NLGN4_partitions/NLGN4_group29.fasta	../firstrun/newGeneCopies/NLGN4/NLGN4_partitions/NLGN4_group29_NLGN4X.fasta	NLGN4X,
../firstrun/newGeneCopies/CAMK1/CAMK1_partitions/CAMK1_group7.fasta	../firstrun/newGeneCopies/CAMK1/CAMK1_partitions/CAMK1_group7_CAMK1OOOOGG1.fasta	OGG1,CAMK1,
../firstrun/newGeneCopies/SAMD10/SAMD10_partitions/SAMD10_group1.fasta	../firstrun/newGeneCopies/SAMD10/SAMD10_partitions/SAMD10_group1_SAMD10OOOPRPF6OOOZNF512B.fasta	SAMD10,ZNF512B,PRPF6,
../firstrun/newGeneCopies/NKD2/NKD2_partitions/NKD2_group1.fasta	../firstrun/newGeneCopies/NKD2/NKD2_partitions/NKD2_group1_NKD2OOORP11-43F13v4.fasta	RP11-43F13.4,NKD2,
../firstrun/newGeneCopies/KANSL1/KANSL1_partitions/KANSL1_group48.fasta	../firstrun/newGeneCopies/KANSL1/KANSL1_partitions/KANSL1_group48_KANSL1OOOKANSL1-AS1OOOLINC02210.fasta	Y_RNA,RPS26P8,RP11-156P1.3,MAPT,RP11-1070B7.3,LINC02210,RP11-669E14.6,LINC02210-CRHR1,KANSL1,KANSL1-AS1,
../firstrun/newGeneCopies/TNXB/TNXB_partitions/TNXB_group1.fasta	../firstrun/newGeneCopies/TNXB/TNXB_partitions/TNXB_group1_TNXBOOO5S_rRNAOOOATF6B.fasta	C4B,ATF6B,XXbac-BPG116M5.15,RNA5SP206,ENSG00000269167,C4B_2,STK19B,XXbac-BPG300A18.16,5S_rRNA,CYP21A1P,XXbac-BPG300A18.17,C4A-AS1,TNXA,TNXB,CYP21A2,C4A,
../firstrun/newGeneCopies/CLK3/CLK3_partitions/CLK3_group1.fasta	../firstrun/newGeneCopies/CLK3/CLK3_partitions/CLK3_group1_CLK3OOOADGRL2OOOARID3B.fasta	ARID3BP1,RP5-837I24.6,CTD-3154N5.2,CTD-3154N5.1,EDC3,ARID3B,CLK3,ADGRL2,
../firstrun/newGeneCopies/MKRN3/MKRN3_partitions/MKRN3_group1.fasta	../firstrun/newGeneCopies/MKRN3/MKRN3_partitions/MKRN3_group1_MKRN3OOOMKRN3-AS1OOOENSG00000288405.fasta	ENSG00000288405,MKRN3,MKRN3-AS1,
../firstrun/newGeneCopies/MKRN3/MKRN3_partitions/MKRN3_group2.fasta	../firstrun/newGeneCopies/MKRN3/MKRN3_partitions/MKRN3_group2_MKRN3.fasta	MKRN3,
../firstrun/newGeneCopies/RNF187/RNF187_partitions/RNF187_group1.fasta	../firstrun/newGeneCopies/RNF187/RNF187_partitions/RNF187_group1_RNF187OOORP5-915N17v11.fasta	RNF187,RP5-915N17.11,
../firstrun/newGeneCopies/PICK1/PICK1_partitions/PICK1_group1.fasta	../firstrun/newGeneCopies/PICK1/PICK1_partitions/PICK1_group1_PICK1OOORP5-1039K5v13OOOSLC16A8.fasta	RP5-1039K5.13,SLC16A8,PICK1,
../firstrun/newGeneCopies/AAK1/AAK1_partitions/AAK1_group1.fasta	../firstrun/newGeneCopies/AAK1/AAK1_partitions/AAK1_group1_AAK1OOOANXA4OOOB3GALNT1P1.fasta	AAK1,ANXA4,RN7SL604P,RPL36AP16,SNORA36C,B3GALNT1P1,
../firstrun/newGeneCopies/GDF9/GDF9_partitions/GDF9_group1.fasta	../firstrun/newGeneCopies/GDF9/GDF9_partitions/GDF9_group1_GDF9OOOUQCRQ.fasta	GDF9,UQCRQ,
../firstrun/newGeneCopies/FLG/FLG_partitions/FLG_group2.fasta	../firstrun/newGeneCopies/FLG/FLG_partitions/FLG_group2_FLGOOOFLG-AS1OOOFLG2.fasta	PUDPP2,FLG-AS1,FLG,RP11-107M16.2,FLG2,HRNR,
../firstrun/newGeneCopies/RASL10A/RASL10A_partitions/RASL10A_group1.fasta	../firstrun/newGeneCopies/RASL10A/RASL10A_partitions/RASL10A_group1_RASL10AOOOAC002059v10OOOGAS2L1.fasta	RASL10A,AC002059.10,GAS2L1,
../firstrun/newGeneCopies/SSNA1/SSNA1_partitions/SSNA1_group1.fasta	../firstrun/newGeneCopies/SSNA1/SSNA1_partitions/SSNA1_group1_SSNA1OOOANAPC2OOOTPRN.fasta	ANAPC2,SSNA1,TPRN,
../firstrun/newGeneCopies/KHDRBS1/KHDRBS1_partitions/KHDRBS1_group1.fasta	../firstrun/newGeneCopies/KHDRBS1/KHDRBS1_partitions/KHDRBS1_group1_KHDRBS1OOORP11-277A4v4.fasta	RP11-277A4.4,KHDRBS1,
../firstrun/newGeneCopies/PABPC3/PABPC3_partitions/PABPC3_group5.fasta	../firstrun/newGeneCopies/PABPC3/PABPC3_partitions/PABPC3_group5_PABPC3.fasta	PABPC3,
../firstrun/newGeneCopies/DCUN1/DCUN1_partitions/DCUN1_group2.fasta	../firstrun/newGeneCopies/DCUN1/DCUN1_partitions/DCUN1_group2_DCUN1D4OOODUTP7OOORP11-365H22v2.fasta	RP11-365H22.2,DCUN1D4,DUTP7,
../firstrun/newGeneCopies/SMIM10L2/SMIM10L2_partitions/SMIM10L2_group1.fasta	../firstrun/newGeneCopies/SMIM10L2/SMIM10L2_partitions/SMIM10L2_group1_SMIM10L2AOOOSMIM10L2BOOOSMIM10L2B-AS1.fasta	ZNF75D,SMIM10L2B,SMIM10L2A,RNA5SP515,NCLP2,ETDB,RP11-85L21.6,ETDA,SMIM10L2B-AS1,
../firstrun/newGeneCopies/WFIKKN1/WFIKKN1_partitions/WFIKKN1_group1.fasta	../firstrun/newGeneCopies/WFIKKN1/WFIKKN1_partitions/WFIKKN1_group1_WFIKKN1OOOMCRIP2OOOMETTL26.fasta	METTL26,WFIKKN1,RAB40C,MCRIP2,
../firstrun/newGeneCopies/MCCD1/MCCD1_partitions/MCCD1_group4.fasta	../firstrun/newGeneCopies/MCCD1/MCCD1_partitions/MCCD1_group4_MCCD1OOOATP6V1G2-DDX39BOOODASS-161H22v6.fasta	ATP6V1G2-DDX39B,DDX39B,MCCD1,DASS-161H22.6,RPL15P4,SNORD117,
../firstrun/newGeneCopies/ZNF558/ZNF558_partitions/ZNF558_group2.fasta	../firstrun/newGeneCopies/ZNF558/ZNF558_partitions/ZNF558_group2_ZNF558OOOCTD-2529P6v3OOOCTD-2529P6v4.fasta	ZNF558,CTD-2529P6.3,CTD-2529P6.4,MBD3L1,
../firstrun/newGeneCopies/OCA2/OCA2_partitions/OCA2_group39.fasta	../firstrun/newGeneCopies/OCA2/OCA2_partitions/OCA2_group39_OCA2.fasta	OCA2,
../firstrun/newGeneCopies/OCA2/OCA2_partitions/OCA2_group35.fasta	../firstrun/newGeneCopies/OCA2/OCA2_partitions/OCA2_group35_OCA2OOOAC090696v2OOORPL5P32.fasta	OCA2,AC090696.2,RPL5P32,
../firstrun/newGeneCopies/FAM110C/FAM110C_partitions/FAM110C_group1.fasta	../firstrun/newGeneCopies/FAM110C/FAM110C_partitions/FAM110C_group1_FAM110C.fasta	FAM110C,
../firstrun/newGeneCopies/NLRP6/NLRP6_partitions/NLRP6_group1.fasta	../firstrun/newGeneCopies/NLRP6/NLRP6_partitions/NLRP6_group1_NLRP6OOOPGGHGOOORP11-326C3v2.fasta	RP11-326C3.2,NLRP6,PGGHG,
../firstrun/newGeneCopies/KIF21A/KIF21A_partitions/KIF21A_group1.fasta	../firstrun/newGeneCopies/KIF21A/KIF21A_partitions/KIF21A_group1_KIF21A.fasta	KIF21A,
../firstrun/newGeneCopies/SART1/SART1_partitions/SART1_group1.fasta	../firstrun/newGeneCopies/SART1/SART1_partitions/SART1_group1_SART1OOOTSGA10IP.fasta	SART1,TSGA10IP,
../firstrun/newGeneCopies/F3/F3_partitions/F3_group1.fasta	../firstrun/newGeneCopies/F3/F3_partitions/F3_group1_F3.fasta	F3,
../firstrun/newGeneCopies/HCN/HCN_partitions/HCN_group1.fasta	../firstrun/newGeneCopies/HCN/HCN_partitions/HCN_group1_HCN3OOOCLK2OOOPKLR.fasta	HCN3,CLK2,PKLR,
../firstrun/newGeneCopies/HCN/HCN_partitions/HCN_group14.fasta	../firstrun/newGeneCopies/HCN/HCN_partitions/HCN_group14_HCN2OOOAC005559v3OOOPOLRMT.fasta	HCN2,AC005559.3,POLRMT,
../firstrun/newGeneCopies/COL9A3/COL9A3_partitions/COL9A3_group1.fasta	../firstrun/newGeneCopies/COL9A3/COL9A3_partitions/COL9A3_group1_COL9A3OOOOGFROOOTCFL5.fasta	TCFL5,COL9A3,OGFR,
../firstrun/newGeneCopies/TPI1/TPI1_partitions/TPI1_group1.fasta	../firstrun/newGeneCopies/TPI1/TPI1_partitions/TPI1_group1_TPI1OOOTPI1P1OOODSTNP2.fasta	DSTNP2,SPSB2,RPL13P5,TPI1P1,LRRC23,TPI1,USP5,
../firstrun/newGeneCopies/RP11-729L2.2/RP11-729L2.2_partitions/RP11-729L2.2_group2.fasta	../firstrun/newGeneCopies/RP11-729L2.2/RP11-729L2.2_partitions/RP11-729L2.2_group2_RP11-729L2v2OOOELAC1OOOSMAD4.fasta	ELAC1,RP11-729L2.2,SMAD4,
../firstrun/newGeneCopies/GYG2/GYG2_partitions/GYG2_group6.fasta	../firstrun/newGeneCopies/GYG2/GYG2_partitions/GYG2_group6_GYG2OOOGYG2-AS1OOOGYG2P1.fasta	ARSD-AS1,GYG2-AS1,ARSL,GYG2,ARSDP1,ARSD,GYG2P1,FAM8A4P,ARSLP1,
../firstrun/newGeneCopies/PXDN/PXDN_partitions/PXDN_group11.fasta	../firstrun/newGeneCopies/PXDN/PXDN_partitions/PXDN_group11_PXDN.fasta	PXDN,
../firstrun/newGeneCopies/SLC45A/SLC45A_partitions/SLC45A_group4.fasta	../firstrun/newGeneCopies/SLC45A/SLC45A_partitions/SLC45A_group4_SLC45A4OOORP11-10J21v2.fasta	SLC45A4,RP11-10J21.2,
../firstrun/newGeneCopies/SLC45A/SLC45A_partitions/SLC45A_group5.fasta	../firstrun/newGeneCopies/SLC45A/SLC45A_partitions/SLC45A_group5_SLC45A4OOORP11-10J21v3OOORP11-10J21v4.fasta	RP11-10J21.5,SLC45A4,RP11-10J21.3,RP11-10J21.4,
../firstrun/newGeneCopies/PRG4/PRG4_partitions/PRG4_group1.fasta	../firstrun/newGeneCopies/PRG4/PRG4_partitions/PRG4_group1_PRG4OOORNU6-1240POOOTPR.fasta	PRG4,RNU6-1240P,TPR,
../firstrun/newGeneCopies/KCTD19/KCTD19_partitions/KCTD19_group1.fasta	../firstrun/newGeneCopies/KCTD19/KCTD19_partitions/KCTD19_group1_KCTD19OOOLRRC36OOOPLEKHG4.fasta	PLEKHG4,RN7SKP118,LRRC36,KCTD19,
../firstrun/newGeneCopies/BOLA/BOLA_partitions/BOLA_group9.fasta	../firstrun/newGeneCopies/BOLA/BOLA_partitions/BOLA_group9_BOLA2OOOBOLA2-SMG1P6OOOBOLA2B.fasta	NPIPB5,SMG1P6,BOLA2,SMG1P1,SLX1A-SULT1A3,BOLA2-SMG1P6,SMG1P2,SULT1A3,SMG1P5,CORO1A,SMG1P7,SLX1A,SLX1B-SULT1A4,EXOSC6,RP11-345J4.6,SMG1,BOLA2B,SMG1P3,SLX1B,SMG1P4,RP11-345J4.11,
../firstrun/newGeneCopies/BOLA/BOLA_partitions/BOLA_group2.fasta	../firstrun/newGeneCopies/BOLA/BOLA_partitions/BOLA_group2_BOLA1OOOH2AC20OOOH2AC21.fasta	H2BC21,H2AC21,SV2A,BOLA1,H2AC20,
../firstrun/newGeneCopies/CHAC2/CHAC2_partitions/CHAC2_group1.fasta	../firstrun/newGeneCopies/CHAC2/CHAC2_partitions/CHAC2_group1_CHAC2OOOASB3OOOGPR75-ASB3.fasta	CHAC2,GPR75-ASB3,ASB3,
../firstrun/newGeneCopies/MGAM/MGAM_partitions/MGAM_group3.fasta	../firstrun/newGeneCopies/MGAM/MGAM_partitions/MGAM_group3_MGAMOOOCLEC5AOOOOR9A4.fasta	MGAM,CLEC5A,TAS2R38,OR9A4,OR9N1P,
../firstrun/newGeneCopies/MGAM/MGAM_partitions/MGAM_group4.fasta	../firstrun/newGeneCopies/MGAM/MGAM_partitions/MGAM_group4_MGAMOOOMGAM2.fasta	MGAM2,MGAM,
../firstrun/newGeneCopies/DNAJB8/DNAJB8_partitions/DNAJB8_group1.fasta	../firstrun/newGeneCopies/DNAJB8/DNAJB8_partitions/DNAJB8_group1_DNAJB8OOODNAJB8-AS1.fasta	DNAJB8-AS1,DNAJB8,
../firstrun/newGeneCopies/RP11-736I24.5/RP11-736I24.5_partitions/RP11-736I24.5_group1.fasta	../firstrun/newGeneCopies/RP11-736I24.5/RP11-736I24.5_partitions/RP11-736I24.5_group1_RP11-736I24v5OOOAC091057v4OOOARHGAP11A.fasta	CHRFAM7A,RP5-1086D14.6,ULK4P3,RP11-382B18.3,U8,AC091057.4,RP11-736I24.5,RP11-1000B6.9,ULK4P2,ARHGAP11A,ULK4P1,Y_RNA,RP11-1000B6.5,RP11-736I24.3,OTUD7A,RP13-395E19.3,ARHGAP11B,RP11-932O9.7,ENSG00000282168,RP11-1000B6.8,
../firstrun/newGeneCopies/PPP1R14A/PPP1R14A_partitions/PPP1R14A_group1.fasta	../firstrun/newGeneCopies/PPP1R14A/PPP1R14A_partitions/PPP1R14A_group1_PPP1R14AOOOSPINT2.fasta	SPINT2,PPP1R14A,
../firstrun/newGeneCopies/PARVB/PARVB_partitions/PARVB_group3.fasta	../firstrun/newGeneCopies/PARVB/PARVB_partitions/PARVB_group3_PARVBOOOCTA-414D7v1OOOPARVG.fasta	RP4-671O14.6,PARVG,CTA-414D7.1,PARVB,
../firstrun/newGeneCopies/PARVB/PARVB_partitions/PARVB_group1.fasta	../firstrun/newGeneCopies/PARVB/PARVB_partitions/PARVB_group1_PARVBOOOSAMM50.fasta	SAMM50,PARVB,
../firstrun/newGeneCopies/SF3B/SF3B_partitions/SF3B_group1.fasta	../firstrun/newGeneCopies/SF3B/SF3B_partitions/SF3B_group1_SF3B4OOOMTMR11.fasta	MTMR11,SF3B4,
../firstrun/newGeneCopies/SF3B/SF3B_partitions/SF3B_group8.fasta	../firstrun/newGeneCopies/SF3B/SF3B_partitions/SF3B_group8_SF3B3OOOCOG4OOOIL34.fasta	SNORD111B,COG4,SF3B3,SNORD111,IL34,
../firstrun/newGeneCopies/SF3B/SF3B_partitions/SF3B_group6.fasta	../firstrun/newGeneCopies/SF3B/SF3B_partitions/SF3B_group6_SF3B2OOOGAL3ST3OOOPACS1.fasta	PACS1,SF3B2,RP11-1167A19.2,GAL3ST3,
../firstrun/newGeneCopies/RASSF7/RASSF7_partitions/RASSF7_group1.fasta	../firstrun/newGeneCopies/RASSF7/RASSF7_partitions/RASSF7_group1_RASSF7OOOLMNTD2OOOLMNTD2-AS1.fasta	MIR210HG,RASSF7,LMNTD2-AS1,LMNTD2,MIR210,LRRC56,
../firstrun/newGeneCopies/MBD3L/MBD3L_partitions/MBD3L_group1.fasta	../firstrun/newGeneCopies/MBD3L/MBD3L_partitions/MBD3L_group1_MBD3L2OOOMBD3L2BOOOMBD3L3.fasta	MBD3L2B,MBD3L4,MBD3L5,MBD3L3,MBD3L2,
../firstrun/newGeneCopies/MBD3L/MBD3L_partitions/MBD3L_group2.fasta	../firstrun/newGeneCopies/MBD3L/MBD3L_partitions/MBD3L_group2_MBD3L1OOOCTD-2529P6v4OOOZNF558.fasta	ZNF558,MBD3L1,CTD-2529P6.4,
../firstrun/newGeneCopies/ARHGEF5/ARHGEF5_partitions/ARHGEF5_group1.fasta	../firstrun/newGeneCopies/ARHGEF5/ARHGEF5_partitions/ARHGEF5_group1_ARHGEF5OOOARHGEF34POOOARHGEF35.fasta	ARHGEF34P,ARHGEF35-AS1,CTAGE4,ENSG00000285408,OR2A1-AS1,ARHGEF5,OR2A9P,ARHGEF35,RP4-798C17.7,ENSG00000288136,
../firstrun/newGeneCopies/SEH1L/SEH1L_partitions/SEH1L_group1.fasta	../firstrun/newGeneCopies/SEH1L/SEH1L_partitions/SEH1L_group1_SEH1LOOOCEP192OOOCEP192-DT.fasta	SEH1L,CEP192-DT,CEP192,
../firstrun/newGeneCopies/GSTM3/GSTM3_partitions/GSTM3_group1.fasta	../firstrun/newGeneCopies/GSTM3/GSTM3_partitions/GSTM3_group1_GSTM3OOOGSTM5OOORP4-735C1v4.fasta	RP4-735C1.4,GSTM3,GSTM5,
../firstrun/newGeneCopies/C1D/C1D_partitions/C1D_group1.fasta	../firstrun/newGeneCopies/C1D/C1D_partitions/C1D_group1_C1D.fasta	C1D,
../firstrun/newGeneCopies/SPTBN2/SPTBN2_partitions/SPTBN2_group1.fasta	../firstrun/newGeneCopies/SPTBN2/SPTBN2_partitions/SPTBN2_group1_SPTBN2OOOC11orf80OOORBM4B.fasta	SPTBN2,RBM4B,RN7SL12P,C11orf80,
../firstrun/newGeneCopies/CTXND2/CTXND2_partitions/CTXND2_group1.fasta	../firstrun/newGeneCopies/CTXND2/CTXND2_partitions/CTXND2_group1_CTXND2OOOCYCSP51.fasta	CTXND2,CYCSP51,
../firstrun/newGeneCopies/DST/DST_partitions/DST_group57.fasta	../firstrun/newGeneCopies/DST/DST_partitions/DST_group57_DST.fasta	DST,
../firstrun/newGeneCopies/DST/DST_partitions/DST_group60.fasta	../firstrun/newGeneCopies/DST/DST_partitions/DST_group60_DST.fasta	DST,
../firstrun/newGeneCopies/DST/DST_partitions/DST_group56.fasta	../firstrun/newGeneCopies/DST/DST_partitions/DST_group56_DST.fasta	DST,
../firstrun/newGeneCopies/DST/DST_partitions/DST_group61.fasta	../firstrun/newGeneCopies/DST/DST_partitions/DST_group61_DSTOOOBEND6OOORNU6-626P.fasta	DST,BEND6,RNU6-626P,
../firstrun/newGeneCopies/DST/DST_partitions/DST_group59.fasta	../firstrun/newGeneCopies/DST/DST_partitions/DST_group59_DSTOOODST-AS1OOORPL17P26.fasta	DST,RPL17P26,DST-AS1,
../firstrun/newGeneCopies/DST/DST_partitions/DST_group58.fasta	../firstrun/newGeneCopies/DST/DST_partitions/DST_group58_DST.fasta	DST,
../firstrun/newGeneCopies/HNF1A/HNF1A_partitions/HNF1A_group1.fasta	../firstrun/newGeneCopies/HNF1A/HNF1A_partitions/HNF1A_group1_HNF1AOOOHNF1A-AS1OOOC12orf43.fasta	C12orf43,HNF1A,HNF1A-AS1,
../firstrun/newGeneCopies/MLXIPL/MLXIPL_partitions/MLXIPL_group1.fasta	../firstrun/newGeneCopies/MLXIPL/MLXIPL_partitions/MLXIPL_group1_MLXIPLOOOCTA-315H11v2.fasta	CTA-315H11.2,MLXIPL,
../firstrun/newGeneCopies/SMPDL3B/SMPDL3B_partitions/SMPDL3B_group1.fasta	../firstrun/newGeneCopies/SMPDL3B/SMPDL3B_partitions/SMPDL3B_group1_SMPDL3BOOORP11-460I13v2OOOXKR8.fasta	SMPDL3B,XKR8,RP11-460I13.2,
../firstrun/newGeneCopies/MFSD11/MFSD11_partitions/MFSD11_group1.fasta	../firstrun/newGeneCopies/MFSD11/MFSD11_partitions/MFSD11_group1_MFSD11OOOMETTL23OOOMIR636.fasta	SRSF2,RNU6-97P,RP11-318A15.7,MFSD11,METTL23,MIR636,
../firstrun/newGeneCopies/DEFB124/DEFB124_partitions/DEFB124_group11.fasta	../firstrun/newGeneCopies/DEFB124/DEFB124_partitions/DEFB124_group11_DEFB124OOOREM1.fasta	DEFB124,REM1,
../firstrun/newGeneCopies/MAGEA12/MAGEA12_partitions/MAGEA12_group1.fasta	../firstrun/newGeneCopies/MAGEA12/MAGEA12_partitions/MAGEA12_group1_MAGEA12OOOCSAG1OOOCSAG2.fasta	MAGEA6,MAGEA6-DT,MAGEA3,MAGEA2B,CSAG1,CSAG2,CSAG4,CSAG3,RP1-14D6.13,MAGEA2,MAGEA12,
../firstrun/newGeneCopies/ARPC3/ARPC3_partitions/ARPC3_group5.fasta	../firstrun/newGeneCopies/ARPC3/ARPC3_partitions/ARPC3_group5_ARPC3OOOGPN3OOORP11-478C19v2.fasta	RP11-478C19.2,GPN3,ARPC3,
../firstrun/newGeneCopies/ARHGEF9/ARHGEF9_partitions/ARHGEF9_group3.fasta	../firstrun/newGeneCopies/ARHGEF9/ARHGEF9_partitions/ARHGEF9_group3_ARHGEF9OOOMIR1468.fasta	ARHGEF9,MIR1468,
../firstrun/newGeneCopies/ARHGEF9/ARHGEF9_partitions/ARHGEF9_group2.fasta	../firstrun/newGeneCopies/ARHGEF9/ARHGEF9_partitions/ARHGEF9_group2_ARHGEF9OOOARHGEF9-IT1OOOBTF3P8.fasta	ARHGEF9,BTF3P8,ARHGEF9-IT1,RP11-357C3.5,
../firstrun/newGeneCopies/TMEM41/TMEM41_partitions/TMEM41_group1.fasta	../firstrun/newGeneCopies/TMEM41/TMEM41_partitions/TMEM41_group1_TMEM41AOOOMAP3K13OOORP11-110C15v5.fasta	RP11-110C15.5,MAP3K13,TMEM41A,
../firstrun/newGeneCopies/RP11-2C24.9/RP11-2C24.9_partitions/RP11-2C24.9_group1.fasta	../firstrun/newGeneCopies/RP11-2C24.9/RP11-2C24.9_partitions/RP11-2C24.9_group1_RP11-2C24v9OOORNU6-1043POOORP11-146F11v1.fasta	SRCAP,SNORA30,RP11-2C24.9,RNU6-1043P,TMEM265,RP11-2C24.4,RP11-146F11.1,
../firstrun/newGeneCopies/RP11-315A19.1/RP11-315A19.1_partitions/RP11-315A19.1_group1.fasta	../firstrun/newGeneCopies/RP11-315A19.1/RP11-315A19.1_partitions/RP11-315A19.1_group1_RP11-315A19v1OOOCATSPER2OOOCATSPER2P1.fasta	STRC,CATSPER2,CATSPER2P1,RP11-315A19.1,STRCP1,
../firstrun/newGeneCopies/RP11-566K11.2/RP11-566K11.2_partitions/RP11-566K11.2_group3.fasta	../firstrun/newGeneCopies/RP11-566K11.2/RP11-566K11.2_partitions/RP11-566K11.2_group3_RP11-566K11v2OOOMC1ROOORP11-566K11v4.fasta	TUBB3,RP11-566K11.4,MC1R,RP11-566K11.2,RP11-566K11.7,
../firstrun/newGeneCopies/SHPRH/SHPRH_partitions/SHPRH_group1.fasta	../firstrun/newGeneCopies/SHPRH/SHPRH_partitions/SHPRH_group1_SHPRHOOOFBXO30-DT.fasta	FBXO30-DT,SHPRH,
../firstrun/newGeneCopies/CD177/CD177_partitions/CD177_group1.fasta	../firstrun/newGeneCopies/CD177/CD177_partitions/CD177_group1_CD177OOOCD177P1OOOCTC-490G23v4.fasta	CTC-490G23.4,CD177,CD177P1,
../firstrun/newGeneCopies/FAAP/FAAP_partitions/FAAP_group1.fasta	../firstrun/newGeneCopies/FAAP/FAAP_partitions/FAAP_group1_FAAP20OOOPRKCZOOOPRKCZ-AS1.fasta	PRKCZ-AS1,FAAP20,RP11-181G12.4,PRKCZ,
../firstrun/newGeneCopies/ATAD3C/ATAD3C_partitions/ATAD3C_group1.fasta	../firstrun/newGeneCopies/ATAD3C/ATAD3C_partitions/ATAD3C_group1_ATAD3COOOATAD3AOOOATAD3B.fasta	ATAD3B,RP5-832C2.8,ATAD3C,ATAD3A,
../firstrun/newGeneCopies/LCE3/LCE3_partitions/LCE3_group1.fasta	../firstrun/newGeneCopies/LCE3/LCE3_partitions/LCE3_group1_LCE3AOOOLCE3BOOOLCE3D.fasta	LCE3A,LCE3D,LCE3B,LCE3E,
../firstrun/newGeneCopies/ADGRB2/ADGRB2_partitions/ADGRB2_group1.fasta	../firstrun/newGeneCopies/ADGRB2/ADGRB2_partitions/ADGRB2_group1_ADGRB2OOOMIR4254.fasta	ADGRB2,MIR4254,
../firstrun/newGeneCopies/HCAR2/HCAR2_partitions/HCAR2_group1.fasta	../firstrun/newGeneCopies/HCAR2/HCAR2_partitions/HCAR2_group1_HCAR2OOOHCAR3OOORP11-324E6v6.fasta	HCAR2,RP11-324E6.6,HCAR3,
../firstrun/newGeneCopies/LIPG/LIPG_partitions/LIPG_group42.fasta	../firstrun/newGeneCopies/LIPG/LIPG_partitions/LIPG_group42_LIPG.fasta	LIPG,
../firstrun/newGeneCopies/PTK2/PTK2_partitions/PTK2_group5.fasta	../firstrun/newGeneCopies/PTK2/PTK2_partitions/PTK2_group5_PTK2OOOCTD-2014D20v1.fasta	CTD-2014D20.1,PTK2,
../firstrun/newGeneCopies/PTK2/PTK2_partitions/PTK2_group8.fasta	../firstrun/newGeneCopies/PTK2/PTK2_partitions/PTK2_group8_PTK2.fasta	PTK2,
../firstrun/newGeneCopies/PTK2/PTK2_partitions/PTK2_group4.fasta	../firstrun/newGeneCopies/PTK2/PTK2_partitions/PTK2_group4_PTK2OOOMIR151A.fasta	MIR151A,PTK2,
../firstrun/newGeneCopies/PTK2/PTK2_partitions/PTK2_group7.fasta	../firstrun/newGeneCopies/PTK2/PTK2_partitions/PTK2_group7_PTK2.fasta	PTK2,
../firstrun/newGeneCopies/RAD17/RAD17_partitions/RAD17_group1.fasta	../firstrun/newGeneCopies/RAD17/RAD17_partitions/RAD17_group1_RAD17OOOAK6OOOMARVELD2.fasta	AK6,RAD17,MARVELD2,TAF9,
../firstrun/newGeneCopies/EHMT1/EHMT1_partitions/EHMT1_group1.fasta	../firstrun/newGeneCopies/EHMT1/EHMT1_partitions/EHMT1_group1_EHMT1OOOARRDC1-AS1OOOMIR602.fasta	RP11-48C7.8,EHMT1,RP11-188C12.3,RP11-188C12.2,Metazoa_SRP,SETP5,MIR602,ARRDC1-AS1,
../firstrun/newGeneCopies/KLK6/KLK6_partitions/KLK6_group1.fasta	../firstrun/newGeneCopies/KLK6/KLK6_partitions/KLK6_group1_KLK6OOOCTB-147C22v6OOOCTB-147C22v8.fasta	CTB-147C22.9,CTB-147C22.6,CTB-147C22.8,KLK6,
../firstrun/newGeneCopies/HLA-L/HLA-L_partitions/HLA-L_group1.fasta	../firstrun/newGeneCopies/HLA-L/HLA-L_partitions/HLA-L_group1_HLA-LOOOHCG17OOOHCG18.fasta	XXbac-BPG283O16.9,HLA-L,HCG18,HCG17,
../firstrun/newGeneCopies/DPEP3/DPEP3_partitions/DPEP3_group1.fasta	../firstrun/newGeneCopies/DPEP3/DPEP3_partitions/DPEP3_group1_DPEP3OOODPEP2OOODUS2.fasta	DPEP2,DUS2,DPEP3,
../firstrun/newGeneCopies/RBM43/RBM43_partitions/RBM43_group1.fasta	../firstrun/newGeneCopies/RBM43/RBM43_partitions/RBM43_group1_RBM43.fasta	RBM43,
../firstrun/newGeneCopies/UCN2/UCN2_partitions/UCN2_group1.fasta	../firstrun/newGeneCopies/UCN2/UCN2_partitions/UCN2_group1_UCN2OOOCOL7A1OOOPFKFB4.fasta	UCN2,COL7A1,PFKFB4,
../firstrun/newGeneCopies/BEX5/BEX5_partitions/BEX5_group1.fasta	../firstrun/newGeneCopies/BEX5/BEX5_partitions/BEX5_group1_BEX5.fasta	BEX5,
../firstrun/newGeneCopies/TRAPPC10/TRAPPC10_partitions/TRAPPC10_group1.fasta	../firstrun/newGeneCopies/TRAPPC10/TRAPPC10_partitions/TRAPPC10_group1_TRAPPC10.fasta	TRAPPC10,
../firstrun/newGeneCopies/TRAPPC10/TRAPPC10_partitions/TRAPPC10_group2.fasta	../firstrun/newGeneCopies/TRAPPC10/TRAPPC10_partitions/TRAPPC10_group2_TRAPPC10OOOCH507-9B2v5OOOCH507-9B2v9.fasta	CH507-9B2.9,CH507-9B2.5,TRAPPC10,PWP2,H2AZP1,
../firstrun/newGeneCopies/PNKP/PNKP_partitions/PNKP_group1.fasta	../firstrun/newGeneCopies/PNKP/PNKP_partitions/PNKP_group1_PNKPOOOAKT1S1OOOPTOV1.fasta	PNKP,TBC1D17,PTOV1-AS2,AKT1S1,PTOV1,
../firstrun/newGeneCopies/TRIML2/TRIML2_partitions/TRIML2_group1.fasta	../firstrun/newGeneCopies/TRIML2/TRIML2_partitions/TRIML2_group1_TRIML2OOORP11-713C19v1.fasta	RP11-713C19.1,TRIML2,
../firstrun/newGeneCopies/PACSIN/PACSIN_partitions/PACSIN_group74.fasta	../firstrun/newGeneCopies/PACSIN/PACSIN_partitions/PACSIN_group74_PACSIN2OOOAL049758v2OOOARFGAP3.fasta	PACSIN2,AL049758.2,ARFGAP3,
../firstrun/newGeneCopies/PACSIN/PACSIN_partitions/PACSIN_group76.fasta	../firstrun/newGeneCopies/PACSIN/PACSIN_partitions/PACSIN_group76_PACSIN2.fasta	PACSIN2,
../firstrun/newGeneCopies/PACSIN/PACSIN_partitions/PACSIN_group35.fasta	../firstrun/newGeneCopies/PACSIN/PACSIN_partitions/PACSIN_group35_PACSIN1OOOSPDEF.fasta	SPDEF,PACSIN1,
../firstrun/newGeneCopies/NCAPH/NCAPH_partitions/NCAPH_group1.fasta	../firstrun/newGeneCopies/NCAPH/NCAPH_partitions/NCAPH_group1_NCAPH.fasta	NCAPH,
../firstrun/newGeneCopies/DUX4/DUX4_partitions/DUX4_group29.fasta	../firstrun/newGeneCopies/DUX4/DUX4_partitions/DUX4_group29_DUX4OOODUX4L10OOODUX4L11.fasta	AC016629.3,LLNLR-271E8.1,DUX4L13,RABL2A,DUX4L14,ENSG00000284174,DUX4,RPL23AP7,DUX4L21,DUX4L15,ENSG00000284181,ENSG00000284025,DUX4L24,ENSG00000284066,DBET,DUX4L23,DUX4L11,ENSG00000283767,DUX4L2,LINC01986,ENSG00000284496,AC016629.7,ROCK1P1,DUX4L12,ENSG00000283955,ENSG00000284502,DUX4L20,DUX4L30,CLUHP4,RPL23AP82,ENSG00000284475,ENSG00000284298,CENPBD1P1,DUX4L8,ENSG00000284002,ENSG00000284210,DUX4L29,ENSG00000284507,DUX4L25,RABL2B,ENSG00000283878,ENSG00000283830,DUX4L22,ENSG00000284262,ENSG00000283884,ENSG00000283820,ENSG00000283893,DUX4L10,MIR8078,DUX4L28,ENSG00000283898,RP11-642N14.4,ENSG00000284156,ENSG00000284383,
../firstrun/newGeneCopies/ASS1/ASS1_partitions/ASS1_group11.fasta	../firstrun/newGeneCopies/ASS1/ASS1_partitions/ASS1_group11_ASS1.fasta	ASS1,
../firstrun/newGeneCopies/HSFY/HSFY_partitions/HSFY_group4.fasta	../firstrun/newGeneCopies/HSFY/HSFY_partitions/HSFY_group4_HSFY1OOOHSFY2OOOAC022486v1.fasta	HSFY2,GPM6BP1,AC022486.1,OFD1P5Y,OFD1P6Y,USP9YP2,TTTY9B,GPM6BP2,HSFY1,USP9YP1,TTTY14,
../firstrun/newGeneCopies/UGT2B15/UGT2B15_partitions/UGT2B15_group1.fasta	../firstrun/newGeneCopies/UGT2B15/UGT2B15_partitions/UGT2B15_group1_UGT2B15OOOUGT2B17.fasta	UGT2B15,UGT2B17,
../firstrun/newGeneCopies/H2AC20/H2AC20_partitions/H2AC20_group3.fasta	../firstrun/newGeneCopies/H2AC20/H2AC20_partitions/H2AC20_group3_H2AC20OOOBOLA1OOOH2AC21.fasta	H2BC21,BOLA1,H2AC20,H2AC21,
../firstrun/newGeneCopies/MCM4/MCM4_partitions/MCM4_group1.fasta	../firstrun/newGeneCopies/MCM4/MCM4_partitions/MCM4_group1_MCM4OOOPRKDCOOORNU6-519P.fasta	PRKDC,MCM4,RNU6-519P,
../firstrun/newGeneCopies/MCAT/MCAT_partitions/MCAT_group1.fasta	../firstrun/newGeneCopies/MCAT/MCAT_partitions/MCAT_group1_MCATOOOBIK.fasta	MCAT,BIK,
../firstrun/newGeneCopies/CASP5/CASP5_partitions/CASP5_group2.fasta	../firstrun/newGeneCopies/CASP5/CASP5_partitions/CASP5_group2_CASP5OOOCASP1.fasta	CASP1,CASP5,
../firstrun/newGeneCopies/LAMTOR/LAMTOR_partitions/LAMTOR_group8.fasta	../firstrun/newGeneCopies/LAMTOR/LAMTOR_partitions/LAMTOR_group8_LAMTOR1OOOLRTOMTOOORP11-807H22v10.fasta	RP11-807H22.10,RP11-807H22.9,LRTOMT,LAMTOR1,
../firstrun/newGeneCopies/ATPAF2/ATPAF2_partitions/ATPAF2_group1.fasta	../firstrun/newGeneCopies/ATPAF2/ATPAF2_partitions/ATPAF2_group1_ATPAF2OOOAC087163v2OOOBRI3P3.fasta	ATPAF2,AC087163.2,DRC3,GID4,BRI3P3,RP11-384M20.1,
../firstrun/newGeneCopies/CNIH1/CNIH1_partitions/CNIH1_group1.fasta	../firstrun/newGeneCopies/CNIH1/CNIH1_partitions/CNIH1_group1_CNIH1.fasta	CNIH1,
../firstrun/newGeneCopies/CARNS1/CARNS1_partitions/CARNS1_group1.fasta	../firstrun/newGeneCopies/CARNS1/CARNS1_partitions/CARNS1_group1_CARNS1OOOPPP1CAOOORPS6KB2.fasta	RPS6KB2,PPP1CA,CARNS1,
../firstrun/newGeneCopies/PLIN4/PLIN4_partitions/PLIN4_group1.fasta	../firstrun/newGeneCopies/PLIN4/PLIN4_partitions/PLIN4_group1_PLIN4OOOHDGFL2.fasta	PLIN4,HDGFL2,
../firstrun/newGeneCopies/RIIAD1/RIIAD1_partitions/RIIAD1_group1.fasta	../firstrun/newGeneCopies/RIIAD1/RIIAD1_partitions/RIIAD1_group1_RIIAD1OOOCELF3OOORP11-98D18v1.fasta	RIIAD1,CELF3,RP11-98D18.1,
../firstrun/newGeneCopies/ZNF569/ZNF569_partitions/ZNF569_group1.fasta	../firstrun/newGeneCopies/ZNF569/ZNF569_partitions/ZNF569_group1_ZNF569OOOZNF570.fasta	ZNF570,ZNF569,
../firstrun/newGeneCopies/GTF2I/GTF2I_partitions/GTF2I_group37.fasta	../firstrun/newGeneCopies/GTF2I/GTF2I_partitions/GTF2I_group37_GTF2IRD1.fasta	GTF2IRD1,
../firstrun/newGeneCopies/GTF2I/GTF2I_partitions/GTF2I_group32.fasta	../firstrun/newGeneCopies/GTF2I/GTF2I_partitions/GTF2I_group32_GTF2IRD2OOOGTF2IRD2BOOOGTF2IRD2P1.fasta	STAG3L3,GTF2IRD2P1,GTF2IRD2,STAG3L2,Y_RNA,GTF2IRD2B,STAG3L1,
../firstrun/newGeneCopies/GTF2I/GTF2I_partitions/GTF2I_group33.fasta	../firstrun/newGeneCopies/GTF2I/GTF2I_partitions/GTF2I_group33_GTF2IOOOGTF2IP1OOOGTF2IP4.fasta	PHBP6,AC004878.2,GTF2I,AC083884.8,PHBP5,AC004878.8,CH17-232I21.1,CASTOR3,CASTOR2,GTF2IP1,PHBP15,GTF2IP4,
../firstrun/newGeneCopies/GTF2I/GTF2I_partitions/GTF2I_group27.fasta	../firstrun/newGeneCopies/GTF2I/GTF2I_partitions/GTF2I_group27_GTF2IRD1OOOGTF2IRD1P1OOOAC005077v5.fasta	GS1-124K5.7,RP5-1186P10.2,RP11-458F8.1,GTF2IRD1P1,AC005077.5,GS1-124K5.10,GS1-124K5.12,LINC00174,GTF2IRD1,RABGEF1,GS1-124K5.4,RP11-792A8.5,RNA5SP233,
../firstrun/newGeneCopies/UBE2M/UBE2M_partitions/UBE2M_group2.fasta	../firstrun/newGeneCopies/UBE2M/UBE2M_partitions/UBE2M_group2_UBE2MOOOCHMP2AOOOMIR6807.fasta	MZF1,TRIM28,CHMP2A,MZF1-AS1,UBE2M,MIR6807,
../firstrun/newGeneCopies/AJUBA/AJUBA_partitions/AJUBA_group1.fasta	../firstrun/newGeneCopies/AJUBA/AJUBA_partitions/AJUBA_group1_AJUBAOOORP11-298I3v4OOORP11-298I3v5.fasta	RP11-298I3.5,AJUBA,RP11-298I3.4,
../firstrun/newGeneCopies/ARHGEF10/ARHGEF10_partitions/ARHGEF10_group4.fasta	../firstrun/newGeneCopies/ARHGEF10/ARHGEF10_partitions/ARHGEF10_group4_ARHGEF10OOOKBTBD11-OT1OOORP11-439C15v7.fasta	KBTBD11-OT1,ARHGEF10,RP11-439C15.9,RP11-439C15.8,RP11-439C15.7,
../firstrun/newGeneCopies/MED30/MED30_partitions/MED30_group1.fasta	../firstrun/newGeneCopies/MED30/MED30_partitions/MED30_group1_MED30OOORPS10P16.fasta	RPS10P16,MED30,
../firstrun/newGeneCopies/SFT2D1/SFT2D1_partitions/SFT2D1_group1.fasta	../firstrun/newGeneCopies/SFT2D1/SFT2D1_partitions/SFT2D1_group1_SFT2D1OOOHNRNPA1P49OOORP1-168L15v7.fasta	HNRNPA1P49,RP1-168L15.7,RP4-655C5.10,SFT2D1,
../firstrun/newGeneCopies/PDIA/PDIA_partitions/PDIA_group2.fasta	../firstrun/newGeneCopies/PDIA/PDIA_partitions/PDIA_group2_PDIA6OOOATP6V1C2OOORNU7-176P.fasta	RNU7-176P,PDIA6,ATP6V1C2,
../firstrun/newGeneCopies/PDIA/PDIA_partitions/PDIA_group1.fasta	../firstrun/newGeneCopies/PDIA/PDIA_partitions/PDIA_group1_PDIA3OOOPDIA3P1OOOPDIA3P2.fasta	RP11-337C18.10,PRKAB2,CATSPER2P1,RP11-296A16.1,FMO5,SERF2,PDIA3,CATSPER2,AC011330.13,PDIA3P1,ELL3,PDIA3P2,
../firstrun/newGeneCopies/RP11-577H5.5/RP11-577H5.5_partitions/RP11-577H5.5_group1.fasta	../firstrun/newGeneCopies/RP11-577H5.5/RP11-577H5.5_partitions/RP11-577H5.5_group1_RP11-577H5v5OOOAC004951v5OOOAC004951v6.fasta	RP5-1022I14.2,AC093668.2,CH17-264B6.1,SPDYE5,AC004951.6,UPK3BL2,SPDYE1,RASA4,RP11-514P8.6,RP11-577H5.5,SPDYE6,CH17-264B6.6,PMS2P6,DTX2P1-UPK3BP1-PMS2P11,PMS2CL,SPDYE2,SPDYE9,CH17-264B6.3,POLR2J,SPDYE10P,SPDYE3,SPDYE13P,SPDYE14,PMS2P4,PMS2P3,PMS2P1,SPDYE2B,AC004980.9,SPDYE18,SPDYE17,PMS2P7,RP11-467H10.2,SPDYE13,SPDYE21,RP11-514P8.10,SPDYE7P,AC004951.5,PMS2P10,SPDYE14P,SPDYE15,RP11-514P8.7,UPK3BL1,LRWD1,PMS2P2,RASA4B,SPDYE8,SPDYE15P,POLR2J4,RP5-1165K10.2,SPDYE12P,SPDYE20P,SPDYE11,MIR4467,POLR2J2,SPDYE16,UPK3B,PMS2P8,POLR2J3,
../firstrun/newGeneCopies/CTCF/CTCF_partitions/CTCF_group1.fasta	../firstrun/newGeneCopies/CTCF/CTCF_partitions/CTCF_group1_CTCFOOOAC009095v4OOOCTD-2012K14v6.fasta	CTCF,CTD-2012K14.7,CTD-2012K14.6,AC009095.4,
../firstrun/newGeneCopies/FAM102/FAM102_partitions/FAM102_group2.fasta	../firstrun/newGeneCopies/FAM102/FAM102_partitions/FAM102_group2_FAM102B.fasta	FAM102B,
../firstrun/newGeneCopies/S100A11/S100A11_partitions/S100A11_group1.fasta	../firstrun/newGeneCopies/S100A11/S100A11_partitions/S100A11_group1_S100A11OOOAL591893v1.fasta	S100A11,AL591893.1,
../firstrun/newGeneCopies/PIAS2/PIAS2_partitions/PIAS2_group1.fasta	../firstrun/newGeneCopies/PIAS2/PIAS2_partitions/PIAS2_group1_PIAS2OOOKATNAL2OOORP11-687F6v4.fasta	KATNAL2,RP11-776B3.1,PIAS2,ST8SIA5-DT,RP11-687F6.4,
../firstrun/newGeneCopies/FAM107A/FAM107A_partitions/FAM107A_group2.fasta	../firstrun/newGeneCopies/FAM107A/FAM107A_partitions/FAM107A_group2_FAM107AOOOFAM3D-AS1.fasta	FAM107A,FAM3D-AS1,
../firstrun/newGeneCopies/FAM107A/FAM107A_partitions/FAM107A_group1.fasta	../firstrun/newGeneCopies/FAM107A/FAM107A_partitions/FAM107A_group1_FAM107AOOORP11-475O23v2.fasta	FAM107A,RP11-475O23.2,
../firstrun/newGeneCopies/CCL11/CCL11_partitions/CCL11_group1.fasta	../firstrun/newGeneCopies/CCL11/CCL11_partitions/CCL11_group1_CCL11.fasta	CCL11,
../firstrun/newGeneCopies/IKBKB/IKBKB_partitions/IKBKB_group1.fasta	../firstrun/newGeneCopies/IKBKB/IKBKB_partitions/IKBKB_group1_IKBKBOOOIKBKB-DT.fasta	IKBKB,IKBKB-DT,
../firstrun/newGeneCopies/CERS2/CERS2_partitions/CERS2_group1.fasta	../firstrun/newGeneCopies/CERS2/CERS2_partitions/CERS2_group1_CERS2OOORP11-316M1v12OOORP11-316M1v3.fasta	SETDB1,RP11-316M1.12,RP11-316M1.3,CERS2,
../firstrun/newGeneCopies/TIMM23B/TIMM23B_partitions/TIMM23B_group9.fasta	../firstrun/newGeneCopies/TIMM23B/TIMM23B_partitions/TIMM23B_group9_TIMM23BOOOTIMM23B-AGAP6OOOAGAP10P.fasta	AGAP12P,RNA5SP315,RP11-574K11.29,RP11-96C23.13,RNA5SP310,TIMM23B,RP11-96C23.10,AGAP6,RP11-96C23.14,SNORA74C-1,AGAP7P,AGAP9,BMS1P4,RNA5SP312,AGAP13P,RNA5SP320,BMS1P2,RNA5SP317,AGAP5,AGAP10P,AGAP4,RP11-144G6.12,SYNPO2L-AS1,RNA5SP311,RP11-144G6.4,AGAP11,AGAP14P,PARGP1,BMS1P3,SNORA74C-2,PARG,BMS1P4-AGAP5,RP11-96C23.5,TIMM23B-AGAP6,TIMM23,RP11-324H6.8,BMS1P1,
../firstrun/newGeneCopies/KIF27/KIF27_partitions/KIF27_group1.fasta	../firstrun/newGeneCopies/KIF27/KIF27_partitions/KIF27_group1_KIF27OOOGKAP1OOORP11-202I11v2.fasta	RP11-575L7.2,RP11-213G2.1,RP11-213G2.2,RP11-202I11.2,RP11-213G2.3,RP11-575L7.4,GKAP1,KIF27,
../firstrun/newGeneCopies/H2AC11/H2AC11_partitions/H2AC11_group1.fasta	../firstrun/newGeneCopies/H2AC11/H2AC11_partitions/H2AC11_group1_H2AC11OOOH2AC12OOOH2BC11.fasta	H2AC12,H2BC11,H2AC11,MIR3143,H4C9,H2BC12,
../firstrun/newGeneCopies/ODF3/ODF3_partitions/ODF3_group1.fasta	../firstrun/newGeneCopies/ODF3/ODF3_partitions/ODF3_group1_ODF3OOOBET1LOOODOC2B.fasta	DOC2B,ODF3,SCGB1C1,BET1L,SCGB1C2,
../firstrun/newGeneCopies/ODF3/ODF3_partitions/ODF3_group4.fasta	../firstrun/newGeneCopies/ODF3/ODF3_partitions/ODF3_group4_ODF3L2OOOSHC2.fasta	ODF3L2,SHC2,
../firstrun/newGeneCopies/LHFPL5/LHFPL5_partitions/LHFPL5_group1.fasta	../firstrun/newGeneCopies/LHFPL5/LHFPL5_partitions/LHFPL5_group1_LHFPL5OOOCLPSOOOSRPK1.fasta	LHFPL5,CLPS,SRPK1,
../firstrun/newGeneCopies/MMP14/MMP14_partitions/MMP14_group1.fasta	../firstrun/newGeneCopies/MMP14/MMP14_partitions/MMP14_group1_MMP14OOOMRPL52.fasta	MRPL52,MMP14,
../firstrun/newGeneCopies/PCID2/PCID2_partitions/PCID2_group1.fasta	../firstrun/newGeneCopies/PCID2/PCID2_partitions/PCID2_group1_PCID2OOOCUL4A.fasta	PCID2,CUL4A,
../firstrun/newGeneCopies/ZNF345/ZNF345_partitions/ZNF345_group1.fasta	../firstrun/newGeneCopies/ZNF345/ZNF345_partitions/ZNF345_group1_ZNF345OOORPL31P61OOOY_RNA.fasta	ZNF790,ZNF345,ZNF829,Y_RNA,RPL31P61,
../firstrun/newGeneCopies/POTE/POTE_partitions/POTE_group3.fasta	../firstrun/newGeneCopies/POTE/POTE_partitions/POTE_group3_POTEBOOOPOTEB2OOOPOTEB3.fasta	MIR3118-2,MED15P9,RNU6-127P,MIR3118-1,RNU6-848P,PLEKHB2,RP11-244H18.1,RNU6-617P,POTEF-AS1,AC018865.11,POTEJ,RNU6-1021P,CTD-2311B13.5,U6,POTEF,POTEG,AC093838.1,ENSG00000288113,RP11-316I2.2,POTEKP,POTEB,POTEB2,RNU6-1049P,POTED,POTEC,ENSG00000276760,RNU6-749P,RNU6-473P,POTEE,LA16c-3G11.7,RNU6-631P,MIR3118-3,MIR3118-4,RNU6-286P,RNU6-1239P,POTEB3,POTEH-AS1,ENSG00000277630,POTEI,RNU6-1268P,POTEH,POTEM,RNU6-816P,
../firstrun/newGeneCopies/RP11-473M10.3/RP11-473M10.3_partitions/RP11-473M10.3_group7.fasta	../firstrun/newGeneCopies/RP11-473M10.3/RP11-473M10.3_partitions/RP11-473M10.3_group7_RP11-473M10v3OOOLINC00395OOOLINC01198.fasta	RP11-473M10.4,TPT1-AS1,RP11-473M10.3,RP11-473M10.5,LINC01198,LINC00395,OR7E156P,OR7E104P,RP11-189B4.8,OR7E101P,
../firstrun/newGeneCopies/ELK1/ELK1_partitions/ELK1_group6.fasta	../firstrun/newGeneCopies/ELK1/ELK1_partitions/ELK1_group6_ELK1OOOUXT.fasta	ELK1,UXT,
../firstrun/newGeneCopies/BHMT/BHMT_partitions/BHMT_group2.fasta	../firstrun/newGeneCopies/BHMT/BHMT_partitions/BHMT_group2_BHMTOOODMGDH.fasta	BHMT,DMGDH,
../firstrun/newGeneCopies/BHMT/BHMT_partitions/BHMT_group1.fasta	../firstrun/newGeneCopies/BHMT/BHMT_partitions/BHMT_group1_BHMT2OOODMGDH.fasta	DMGDH,BHMT2,
../firstrun/newGeneCopies/PCNX3/PCNX3_partitions/PCNX3_group1.fasta	../firstrun/newGeneCopies/PCNX3/PCNX3_partitions/PCNX3_group1_PCNX3OOOMAP3K11OOOMIR4690.fasta	MIR4690,MAP3K11,SIPA1,PCNX3,
../firstrun/newGeneCopies/ITIH3/ITIH3_partitions/ITIH3_group1.fasta	../firstrun/newGeneCopies/ITIH3/ITIH3_partitions/ITIH3_group1_ITIH3OOOITIH1OOOITIH4.fasta	ITIH3,RP5-966M1.6,ITIH4,ITIH1,
../firstrun/newGeneCopies/MOK/MOK_partitions/MOK_group5.fasta	../firstrun/newGeneCopies/MOK/MOK_partitions/MOK_group5_MOK.fasta	MOK,
../firstrun/newGeneCopies/MOK/MOK_partitions/MOK_group4.fasta	../firstrun/newGeneCopies/MOK/MOK_partitions/MOK_group4_MOKOOOWDR20.fasta	MOK,WDR20,
../firstrun/newGeneCopies/FABP3/FABP3_partitions/FABP3_group1.fasta	../firstrun/newGeneCopies/FABP3/FABP3_partitions/FABP3_group1_FABP3OOOZCCHC17.fasta	ZCCHC17,FABP3,
../firstrun/newGeneCopies/TNFAIP8L2/TNFAIP8L2_partitions/TNFAIP8L2_group1.fasta	../firstrun/newGeneCopies/TNFAIP8L2/TNFAIP8L2_partitions/TNFAIP8L2_group1_TNFAIP8L2OOOLYSMD1OOOSCNM1.fasta	LYSMD1,TNFAIP8L2,SCNM1,
../firstrun/newGeneCopies/OBSCN/OBSCN_partitions/OBSCN_group1.fasta	../firstrun/newGeneCopies/OBSCN/OBSCN_partitions/OBSCN_group1_OBSCNOOOOBSCN-AS1OOOAL353593v1.fasta	AL353593.1,RP5-1139B12.4,OBSCN-AS1,RP5-1139B12.2,OBSCN,RP5-1139B12.5,RP11-245P10.6,RP11-245P10.9,
../firstrun/newGeneCopies/ADAT2/ADAT2_partitions/ADAT2_group1.fasta	../firstrun/newGeneCopies/ADAT2/ADAT2_partitions/ADAT2_group1_ADAT2OOOPEX3OOORNA5SP221.fasta	ADAT2,TUBB8P2,PEX3,RNA5SP221,
../firstrun/newGeneCopies/MASP2/MASP2_partitions/MASP2_group1.fasta	../firstrun/newGeneCopies/MASP2/MASP2_partitions/MASP2_group1_MASP2OOOAL109811v3OOOAL109811v4.fasta	AL109811.4,AL109811.3,MASP2,SRM,TARDBP,
../firstrun/newGeneCopies/SRR/SRR_partitions/SRR_group9.fasta	../firstrun/newGeneCopies/SRR/SRR_partitions/SRR_group9_SRROOOHNRNPA1P16OOOSMG6.fasta	HNRNPA1P16,SNORD91B,TSR1,SRR,SNORD91A,SMG6,
../firstrun/newGeneCopies/STH/STH_partitions/STH_group1.fasta	../firstrun/newGeneCopies/STH/STH_partitions/STH_group1_STHOOOMAPT.fasta	STH,MAPT,
../firstrun/newGeneCopies/SCUBE/SCUBE_partitions/SCUBE_group5.fasta	../firstrun/newGeneCopies/SCUBE/SCUBE_partitions/SCUBE_group5_SCUBE1OOOSCUBE1-AS1OOOSCUBE1-AS2.fasta	SCUBE1-AS2,Z82214.2,SCUBE1,SCUBE1-AS1,
../firstrun/newGeneCopies/SCUBE/SCUBE_partitions/SCUBE_group4.fasta	../firstrun/newGeneCopies/SCUBE/SCUBE_partitions/SCUBE_group4_SCUBE2OOODENND5A.fasta	DENND5A,SCUBE2,
../firstrun/newGeneCopies/SCUBE/SCUBE_partitions/SCUBE_group1.fasta	../firstrun/newGeneCopies/SCUBE/SCUBE_partitions/SCUBE_group1_SCUBE3OOORP3-329A5v8.fasta	RP3-329A5.8,SCUBE3,
../firstrun/newGeneCopies/SCUBE/SCUBE_partitions/SCUBE_group3.fasta	../firstrun/newGeneCopies/SCUBE/SCUBE_partitions/SCUBE_group3_SCUBE2OOOKRT8P41OOOMIR5691.fasta	MIR5691,RP11-467K18.2,RP11-467K18.5,KRT8P41,SCUBE2,
../firstrun/newGeneCopies/CLN8/CLN8_partitions/CLN8_group6.fasta	../firstrun/newGeneCopies/CLN8/CLN8_partitions/CLN8_group6_CLN8OOOCTD-2336O2v1OOOCTD-2336O2v2.fasta	CLN8,CTD-2336O2.3,KBTBD11-OT1,MIR3674,CTD-2336O2.2,CTD-2336O2.1,
../firstrun/newGeneCopies/ZBTB18/ZBTB18_partitions/ZBTB18_group1.fasta	../firstrun/newGeneCopies/ZBTB18/ZBTB18_partitions/ZBTB18_group1_ZBTB18OOOLINC02774.fasta	ZBTB18,LINC02774,
../firstrun/newGeneCopies/CDK20/CDK20_partitions/CDK20_group1.fasta	../firstrun/newGeneCopies/CDK20/CDK20_partitions/CDK20_group1_CDK20.fasta	CDK20,
../firstrun/newGeneCopies/RABL2/RABL2_partitions/RABL2_group1.fasta	../firstrun/newGeneCopies/RABL2/RABL2_partitions/RABL2_group1_RABL2AOOORABL2BOOOAC002056v3.fasta	RPL23AP82,RPL23AP7,RABL2B,AC002056.3,RABL2A,
../firstrun/newGeneCopies/MLC1/MLC1_partitions/MLC1_group1.fasta	../firstrun/newGeneCopies/MLC1/MLC1_partitions/MLC1_group1_MLC1OOOTTLL8.fasta	TTLL8,MLC1,
../firstrun/newGeneCopies/PWWP4/PWWP4_partitions/PWWP4_group1.fasta	../firstrun/newGeneCopies/PWWP4/PWWP4_partitions/PWWP4_group1_PWWP4OOOAC152010v1.fasta	PWWP4,AC152010.1,
../firstrun/newGeneCopies/AXIN1/AXIN1_partitions/AXIN1_group1.fasta	../firstrun/newGeneCopies/AXIN1/AXIN1_partitions/AXIN1_group1_AXIN1OOOPDIA2.fasta	PDIA2,AXIN1,
../firstrun/newGeneCopies/TOR4/TOR4_partitions/TOR4_group1.fasta	../firstrun/newGeneCopies/TOR4/TOR4_partitions/TOR4_group1_TOR4AOOONELFBOOORP13-122B23v9.fasta	RP13-122B23.9,TOR4A,NELFB,
../firstrun/newGeneCopies/SLC7A/SLC7A_partitions/SLC7A_group192.fasta	../firstrun/newGeneCopies/SLC7A/SLC7A_partitions/SLC7A_group192_SLC7A13OOOCTD-3118D11v3.fasta	SLC7A13,CTD-3118D11.3,
../firstrun/newGeneCopies/SLC7A/SLC7A_partitions/SLC7A_group341.fasta	../firstrun/newGeneCopies/SLC7A/SLC7A_partitions/SLC7A_group341_SLC7A6OOOSLC7A6OSOOOPRMT7.fasta	PRMT7,SLC7A6OS,RP11-96D1.8,RNU6-1262P,RP11-96D1.3,SLC7A6,
../firstrun/newGeneCopies/SLC7A/SLC7A_partitions/SLC7A_group830.fasta	../firstrun/newGeneCopies/SLC7A/SLC7A_partitions/SLC7A_group830_SLC7A3.fasta	SLC7A3,
../firstrun/newGeneCopies/CPNE1/CPNE1_partitions/CPNE1_group1.fasta	../firstrun/newGeneCopies/CPNE1/CPNE1_partitions/CPNE1_group1_CPNE1OOONFS1OOORBM12.fasta	RN7SKP271,CPNE1,NFS1,RNU6-759P,RBM12,RP1-309K20.6,
../firstrun/newGeneCopies/GMIP/GMIP_partitions/GMIP_group1.fasta	../firstrun/newGeneCopies/GMIP/GMIP_partitions/GMIP_group1_GMIPOOOATP13A1OOOLPAR2.fasta	GMIP,ATP13A1,LPAR2,
../firstrun/newGeneCopies/ZNF781/ZNF781_partitions/ZNF781_group5.fasta	../firstrun/newGeneCopies/ZNF781/ZNF781_partitions/ZNF781_group5_ZNF781OOOCTD-2528L19v4OOOSELENOKP1.fasta	ZNF781,CTD-2528L19.4,ZFP30,SELENOKP1,
../firstrun/newGeneCopies/GREM1/GREM1_partitions/GREM1_group1.fasta	../firstrun/newGeneCopies/GREM1/GREM1_partitions/GREM1_group1_GREM1OOOENSG00000282555OOORP11-758N13v1.fasta	GREM1,ENSG00000282555,RP11-758N13.1,
../firstrun/newGeneCopies/CD79A/CD79A_partitions/CD79A_group1.fasta	../firstrun/newGeneCopies/CD79A/CD79A_partitions/CD79A_group1_CD79AOOOARHGEF1OOORPS19.fasta	RPS19,CD79A,ARHGEF1,
../firstrun/newGeneCopies/TMSB15/TMSB15_partitions/TMSB15_group5.fasta	../firstrun/newGeneCopies/TMSB15/TMSB15_partitions/TMSB15_group5_TMSB15A.fasta	TMSB15A,
../firstrun/newGeneCopies/TMSB15/TMSB15_partitions/TMSB15_group7.fasta	../firstrun/newGeneCopies/TMSB15/TMSB15_partitions/TMSB15_group7_TMSB15BOOOTMSB15B-AS1OOODPPA3P1.fasta	TMSB15B,DPPA3P1,SLC25A53P1,RP5-1055C14.9,ZCCHC18,LL0XNC01-116E7.5,SLC25A53,H2BW3P,TMSB15B-AS1,ELF2P1,H2BP9,
../firstrun/newGeneCopies/SPAG4/SPAG4_partitions/SPAG4_group1.fasta	../firstrun/newGeneCopies/SPAG4/SPAG4_partitions/SPAG4_group1_SPAG4.fasta	SPAG4,
../firstrun/newGeneCopies/PDCD6/PDCD6_partitions/PDCD6_group4.fasta	../firstrun/newGeneCopies/PDCD6/PDCD6_partitions/PDCD6_group4_PDCD6OOOPDCD6-AHRROOOAC024560v3.fasta	RP11-141C7.3,PDCD6-AHRR,RP11-141C7.4,AC024937.6,RP11-496H1.1,AC024560.3,AC069513.4,SDHAP1,AC024937.4,RP11-496H1.3,AHRR,RP11-43F13.1,CTD-2012J19.3,RP11-141C7.5,CTD-2546F11.1,RP11-496H1.2,PDCD6,CTD-2012J19.1,CTD-2083E4.6,RP11-480A16.3,RP11-480A16.2,CTD-2083E4.5,
../firstrun/newGeneCopies/PRSS27/PRSS27_partitions/PRSS27_group1.fasta	../firstrun/newGeneCopies/PRSS27/PRSS27_partitions/PRSS27_group1_PRSS27OOOKCTD5OOOSRRM2-AS1.fasta	KCTD5,PRSS27,SRRM2-AS1,
../firstrun/newGeneCopies/RHBDD3/RHBDD3_partitions/RHBDD3_group1.fasta	../firstrun/newGeneCopies/RHBDD3/RHBDD3_partitions/RHBDD3_group1_RHBDD3OOOCTA-984G1v5OOOEMID1.fasta	RHBDD3,EWSR1,EMID1,CTA-984G1.5,
../firstrun/newGeneCopies/VWF/VWF_partitions/VWF_group1.fasta	../firstrun/newGeneCopies/VWF/VWF_partitions/VWF_group1_VWFOOOVWFP1OOOANKRD62P1.fasta	ROBO2,ANO2,VWF,ANKRD62P1-PARP4P3,KB-7G2.8,ANKRD62P1,VWFP1,RN7SL69P,TPTEP1,
../firstrun/newGeneCopies/BCL7B/BCL7B_partitions/BCL7B_group1.fasta	../firstrun/newGeneCopies/BCL7B/BCL7B_partitions/BCL7B_group1_BCL7B.fasta	BCL7B,
../firstrun/newGeneCopies/MUSK/MUSK_partitions/MUSK_group2.fasta	../firstrun/newGeneCopies/MUSK/MUSK_partitions/MUSK_group2_MUSK.fasta	MUSK,
../firstrun/newGeneCopies/MUSK/MUSK_partitions/MUSK_group3.fasta	../firstrun/newGeneCopies/MUSK/MUSK_partitions/MUSK_group3_MUSK.fasta	MUSK,
../firstrun/newGeneCopies/DDIT4L/DDIT4L_partitions/DDIT4L_group1.fasta	../firstrun/newGeneCopies/DDIT4L/DDIT4L_partitions/DDIT4L_group1_DDIT4LOOOH2AZ1-DTOOORP11-588P8v1.fasta	H2AZ1-DT,RP11-588P8.1,DDIT4L,
../firstrun/newGeneCopies/GPR89/GPR89_partitions/GPR89_group2.fasta	../firstrun/newGeneCopies/GPR89/GPR89_partitions/GPR89_group2_GPR89AOOOGPR89BOOONBPF25P.fasta	GPR89B,NBPF25P,GPR89A,PDZK1,PDZK1P1,
../firstrun/newGeneCopies/RP11-666O2.7/RP11-666O2.7_partitions/RP11-666O2.7_group1.fasta	../firstrun/newGeneCopies/RP11-666O2.7/RP11-666O2.7_partitions/RP11-666O2.7_group1_RP11-666O2v7OOOMPV17LOOONUPR1.fasta	RP11-1021N1.1,RP11-666O2.2,SULT1A2,RP11-345J4.11,SGF29,RP11-231C14.10,SLX1A-SULT1A3,RP11-666O2.5,RP11-666O2.4,SULT1A3,RP11-666O2.7,SULT1A1,RP11-666O2.1,RP11-666O2.6,SLX1B-SULT1A4,SLX1A,PDXDC2P,PDXDC2P-NPIPB14P,RP11-345J4.3,SULT1A4,RP11-345J4.4,RP11-347C12.3,SLX1B,NUPR1,MPV17L,RP11-347C12.4,
../firstrun/newGeneCopies/KCNV2/KCNV2_partitions/KCNV2_group1.fasta	../firstrun/newGeneCopies/KCNV2/KCNV2_partitions/KCNV2_group1_KCNV2OOOPUM3.fasta	KCNV2,PUM3,
../firstrun/newGeneCopies/CDC16/CDC16_partitions/CDC16_group1.fasta	../firstrun/newGeneCopies/CDC16/CDC16_partitions/CDC16_group1_CDC16OOOMIR4502OOOMIR548AR.fasta	MIR4502,RP11-569D9.7,MIR548AR,CDC16,
../firstrun/newGeneCopies/ZNF449/ZNF449_partitions/ZNF449_group1.fasta	../firstrun/newGeneCopies/ZNF449/ZNF449_partitions/ZNF449_group1_ZNF449OOOZNF75D.fasta	ZNF449,ZNF75D,
../firstrun/newGeneCopies/SGF29/SGF29_partitions/SGF29_group1.fasta	../firstrun/newGeneCopies/SGF29/SGF29_partitions/SGF29_group1_SGF29OOORP11-231C14v10OOORP11-666O2v2.fasta	RP11-231C14.10,RP11-666O2.5,SULT1A2,RP11-666O2.7,SULT1A1,SGF29,RP11-666O2.2,RP11-666O2.4,RP11-666O2.6,
../firstrun/newGeneCopies/GRK2/GRK2_partitions/GRK2_group1.fasta	../firstrun/newGeneCopies/GRK2/GRK2_partitions/GRK2_group1_GRK2OOOANKRD13D.fasta	GRK2,ANKRD13D,
../firstrun/newGeneCopies/EBAG9/EBAG9_partitions/EBAG9_group1.fasta	../firstrun/newGeneCopies/EBAG9/EBAG9_partitions/EBAG9_group1_EBAG9OOOPKHD1L1.fasta	PKHD1L1,EBAG9,
../firstrun/newGeneCopies/TWF2/TWF2_partitions/TWF2_group1.fasta	../firstrun/newGeneCopies/TWF2/TWF2_partitions/TWF2_group1_TWF2OOOPPM1MOOORP11-330H6v5.fasta	RP5-1157M23.2,TLR9,RP11-330H6.5,PPM1M,TWF2,
../firstrun/newGeneCopies/RFT1/RFT1_partitions/RFT1_group1.fasta	../firstrun/newGeneCopies/RFT1/RFT1_partitions/RFT1_group1_RFT1OOORP11-894J14v5.fasta	RP11-894J14.5,RFT1,
../firstrun/newGeneCopies/TNFSF11/TNFSF11_partitions/TNFSF11_group2.fasta	../firstrun/newGeneCopies/TNFSF11/TNFSF11_partitions/TNFSF11_group2_TNFSF11.fasta	TNFSF11,
../firstrun/newGeneCopies/TNFSF11/TNFSF11_partitions/TNFSF11_group1.fasta	../firstrun/newGeneCopies/TNFSF11/TNFSF11_partitions/TNFSF11_group1_TNFSF11.fasta	TNFSF11,
../firstrun/newGeneCopies/NOMO/NOMO_partitions/NOMO_group1.fasta	../firstrun/newGeneCopies/NOMO/NOMO_partitions/NOMO_group1_NOMO1OOONOMO2OOONOMO3.fasta	MIR3179-2,MIR3670-2,MIR3670-4,NOMO2,NOMO1,MIR3670-3,RP11-517A5.6,PKD1P6,MIR3179-1,NOMO3,RP11-517A5.5,MIR3179-4,RP11-457I16.4,PKD1P3,MIR3179-3,MIR3180-4,RP11-719K4.7,MIR3670-1,
../firstrun/newGeneCopies/TMEM270/TMEM270_partitions/TMEM270_group1.fasta	../firstrun/newGeneCopies/TMEM270/TMEM270_partitions/TMEM270_group1_TMEM270.fasta	TMEM270,
../firstrun/newGeneCopies/MST1/MST1_partitions/MST1_group9.fasta	../firstrun/newGeneCopies/MST1/MST1_partitions/MST1_group9_MST1ROOOCTD-2330K9v2OOOCTD-2330K9v3.fasta	MST1R,CTD-2330K9.3,CTD-2330K9.2,
../firstrun/newGeneCopies/MST1/MST1_partitions/MST1_group1.fasta	../firstrun/newGeneCopies/MST1/MST1_partitions/MST1_group1_MST1OOOMST1LOOOMST1P2.fasta	SATB1-AS1,AC099668.5,MST1L,RP5-1182A14.8,MST1,RP11-400F1.2,CROCCP2,APEH,MST1P2,RNF123,CROCC,
../firstrun/newGeneCopies/NOB1/NOB1_partitions/NOB1_group2.fasta	../firstrun/newGeneCopies/NOB1/NOB1_partitions/NOB1_group2_NOB1OOOCTD-2033A16v2OOOITGB1BP2.fasta	NQO1-DT,ITGB1BP2,NONO,NOB1,CTD-2033A16.2,
../firstrun/newGeneCopies/GATA2/GATA2_partitions/GATA2_group1.fasta	../firstrun/newGeneCopies/GATA2/GATA2_partitions/GATA2_group1_GATA2OOOGATA2-AS1.fasta	GATA2,GATA2-AS1,
../firstrun/newGeneCopies/ATF6/ATF6_partitions/ATF6_group1.fasta	../firstrun/newGeneCopies/ATF6/ATF6_partitions/ATF6_group1_ATF6OOORP11-474I16v8.fasta	ATF6,RP11-474I16.8,
../firstrun/newGeneCopies/ATF6/ATF6_partitions/ATF6_group2.fasta	../firstrun/newGeneCopies/ATF6/ATF6_partitions/ATF6_group2_ATF6.fasta	ATF6,
../firstrun/newGeneCopies/ATF6/ATF6_partitions/ATF6_group3.fasta	../firstrun/newGeneCopies/ATF6/ATF6_partitions/ATF6_group3_ATF6OOORP11-456P18v2.fasta	ATF6,RP11-456P18.2,
../firstrun/newGeneCopies/ATF6/ATF6_partitions/ATF6_group4.fasta	../firstrun/newGeneCopies/ATF6/ATF6_partitions/ATF6_group4_ATF6.fasta	ATF6,
../firstrun/newGeneCopies/PHGDH/PHGDH_partitions/PHGDH_group1.fasta	../firstrun/newGeneCopies/PHGDH/PHGDH_partitions/PHGDH_group1_PHGDHOOOZNF697.fasta	ZNF697,PHGDH,
../firstrun/newGeneCopies/PHGDH/PHGDH_partitions/PHGDH_group2.fasta	../firstrun/newGeneCopies/PHGDH/PHGDH_partitions/PHGDH_group2_PHGDH.fasta	PHGDH,
../firstrun/newGeneCopies/CFAP20/CFAP20_partitions/CFAP20_group11.fasta	../firstrun/newGeneCopies/CFAP20/CFAP20_partitions/CFAP20_group11_CFAP20OOOCTB-134F13v1OOORP11-459F6v3.fasta	CTB-134F13.1,RP11-459F6.3,CFAP20,
../firstrun/newGeneCopies/FAM160A2/FAM160A2_partitions/FAM160A2_group1.fasta	../firstrun/newGeneCopies/FAM160A2/FAM160A2_partitions/FAM160A2_group1_FAM160A2OOOC11orf42OOOCNGA4.fasta	CNGA4,C11orf42,FAM160A2,
../firstrun/newGeneCopies/GAL/GAL_partitions/GAL_group1.fasta	../firstrun/newGeneCopies/GAL/GAL_partitions/GAL_group1_GAL.fasta	GAL,
../firstrun/newGeneCopies/EIF5A/EIF5A_partitions/EIF5A_group2.fasta	../firstrun/newGeneCopies/EIF5A/EIF5A_partitions/EIF5A_group2_EIF5AL1OOOEIF5AP4OOORP11-342M3v2.fasta	EIF5AP4,RP11-40F6.1,RP11-36D19.9,EIF5AL1,RP11-342M3.2,
../firstrun/newGeneCopies/EIF5A/EIF5A_partitions/EIF5A_group1.fasta	../firstrun/newGeneCopies/EIF5A/EIF5A_partitions/EIF5A_group1_EIF5A2OOORP11-114D6v2.fasta	EIF5A2,RP11-114D6.2,
../firstrun/newGeneCopies/MTRNR2/MTRNR2_partitions/MTRNR2_group19.fasta	../firstrun/newGeneCopies/MTRNR2/MTRNR2_partitions/MTRNR2_group19_MTRNR2L8OOOAMPD3OOOMIR4485.fasta	MTRNR2L8,AMPD3,RNF141,MIR4485,
../firstrun/newGeneCopies/MTRNR2/MTRNR2_partitions/MTRNR2_group5.fasta	../firstrun/newGeneCopies/MTRNR2/MTRNR2_partitions/MTRNR2_group5_MTRNR2L12OOORPL18AP8.fasta	MTRNR2L12,RPL18AP8,
../firstrun/newGeneCopies/MTRNR2/MTRNR2_partitions/MTRNR2_group11.fasta	../firstrun/newGeneCopies/MTRNR2/MTRNR2_partitions/MTRNR2_group11_MTRNR2L6OOOTRBV25-1OOOTRBV25OR9-2.fasta	TRBV25OR9-2,MTRNR2L6,TRBV25-1,
../firstrun/newGeneCopies/APOM/APOM_partitions/APOM_group1.fasta	../firstrun/newGeneCopies/APOM/APOM_partitions/APOM_group1_APOMOOOBAG6OOOC6orf47.fasta	C6orf47-AS1,C6orf47,APOM,BAG6,GPANK1,
../firstrun/newGeneCopies/NOD1/NOD1_partitions/NOD1_group1.fasta	../firstrun/newGeneCopies/NOD1/NOD1_partitions/NOD1_group1_NOD1OOOGS1-114I9v1.fasta	NOD1,GS1-114I9.1,
../firstrun/newGeneCopies/HBZ/HBZ_partitions/HBZ_group1.fasta	../firstrun/newGeneCopies/HBZ/HBZ_partitions/HBZ_group1_HBZOOOHBZP1OOOHBM.fasta	HBZP1,NPRL3,HBZ,HBM,
../firstrun/newGeneCopies/CGRRF1/CGRRF1_partitions/CGRRF1_group1.fasta	../firstrun/newGeneCopies/CGRRF1/CGRRF1_partitions/CGRRF1_group1_CGRRF1.fasta	CGRRF1,
../firstrun/newGeneCopies/NFILZ/NFILZ_partitions/NFILZ_group1.fasta	../firstrun/newGeneCopies/NFILZ/NFILZ_partitions/NFILZ_group1_NFILZOOOAC243312v1.fasta	NFILZ,AC243312.1,
../firstrun/newGeneCopies/PLCL2/PLCL2_partitions/PLCL2_group2.fasta	../firstrun/newGeneCopies/PLCL2/PLCL2_partitions/PLCL2_group2_PLCL2.fasta	PLCL2,
../firstrun/newGeneCopies/PLCL2/PLCL2_partitions/PLCL2_group3.fasta	../firstrun/newGeneCopies/PLCL2/PLCL2_partitions/PLCL2_group3_PLCL2OOOMIR3714.fasta	PLCL2,MIR3714,
../firstrun/newGeneCopies/PLCL2/PLCL2_partitions/PLCL2_group1.fasta	../firstrun/newGeneCopies/PLCL2/PLCL2_partitions/PLCL2_group1_PLCL2.fasta	PLCL2,
../firstrun/newGeneCopies/PLCL2/PLCL2_partitions/PLCL2_group6.fasta	../firstrun/newGeneCopies/PLCL2/PLCL2_partitions/PLCL2_group6_PLCL2.fasta	PLCL2,
../firstrun/newGeneCopies/PLCL2/PLCL2_partitions/PLCL2_group5.fasta	../firstrun/newGeneCopies/PLCL2/PLCL2_partitions/PLCL2_group5_PLCL2OOOPLCL2-AS1.fasta	PLCL2-AS1,PLCL2,
../firstrun/newGeneCopies/KIF5B/KIF5B_partitions/KIF5B_group1.fasta	../firstrun/newGeneCopies/KIF5B/KIF5B_partitions/KIF5B_group1_KIF5BOOOY_RNA.fasta	Y_RNA,KIF5B,
../firstrun/newGeneCopies/NAPEPLD/NAPEPLD_partitions/NAPEPLD_group1.fasta	../firstrun/newGeneCopies/NAPEPLD/NAPEPLD_partitions/NAPEPLD_group1_NAPEPLDOOOARMC10OOOARMC10P1.fasta	RP11-401L13.4,RPL23AP95,ARMC10P1,NAPEPLD,ARMC10,
../firstrun/newGeneCopies/TUBB8B/TUBB8B_partitions/TUBB8B_group1.fasta	../firstrun/newGeneCopies/TUBB8B/TUBB8B_partitions/TUBB8B_group1_TUBB8BOOOAC073135v2OOOAC073135v4.fasta	TUBBP5,FAM166AP10,AC073135.2,TUBB8,FAM166AP7,TUBB8B,AF146191.8,TUBB7P,TUBB8P8,TUBB8P7,FAM166AP6,FAM166AP3,PRDM7,FAM41C,TUBB8P11,RP11-683L23.7,RP11-206L10.19,AC073135.4,RP11-424E7.6,
../firstrun/newGeneCopies/RCE1/RCE1_partitions/RCE1_group1.fasta	../firstrun/newGeneCopies/RCE1/RCE1_partitions/RCE1_group1_RCE1OOOC11orf80OOOPC.fasta	C11orf80,PC,RCE1,
../firstrun/newGeneCopies/STX19/STX19_partitions/STX19_group1.fasta	../firstrun/newGeneCopies/STX19/STX19_partitions/STX19_group1_STX19OOOARL13B.fasta	ARL13B,STX19,
../firstrun/newGeneCopies/SNRNP200/SNRNP200_partitions/SNRNP200_group1.fasta	../firstrun/newGeneCopies/SNRNP200/SNRNP200_partitions/SNRNP200_group1_SNRNP200OOOAC021188v4OOOCIAO1.fasta	AC021188.4,SNRNP200,CIAO1,
../firstrun/newGeneCopies/CTSK/CTSK_partitions/CTSK_group1.fasta	../firstrun/newGeneCopies/CTSK/CTSK_partitions/CTSK_group1_CTSKOOOARNTOOOUBE2D3P3.fasta	ARNT,UBE2D3P3,CTSK,
../firstrun/newGeneCopies/FBRS/FBRS_partitions/FBRS_group5.fasta	../firstrun/newGeneCopies/FBRS/FBRS_partitions/FBRS_group5_FBRSOOOPRR14.fasta	PRR14,FBRS,
../firstrun/newGeneCopies/H4C15/H4C15_partitions/H4C15_group1.fasta	../firstrun/newGeneCopies/H4C15/H4C15_partitions/H4C15_group1_H4C15OOOH2AC18OOOH2AC19.fasta	H2AC18,H2BC20P,H2BC19P,H4C15,H2AC19,RP11-196G18.23,H3C15,H4C14,H3C14,
../firstrun/newGeneCopies/CTD-2546F11.1/CTD-2546F11.1_partitions/CTD-2546F11.1_group1.fasta	../firstrun/newGeneCopies/CTD-2546F11.1/CTD-2546F11.1_partitions/CTD-2546F11.1_group1_CTD-2546F11v1OOOAC024560v3OOOAC024937v4.fasta	MUC20-OT1,RP11-496H1.3,RP11-496H1.1,RP11-480A16.2,CTD-2083E4.4,CTD-2012J19.1,CTD-2012J19.2,SDHA,SDHAP3,PDCD6,RP11-141C7.5,LINC01237,RP11-341N2.3,SDHAP2,AC024937.6,CTD-2546F11.1,CTD-2083E4.5,AC093642.4,CCDC127,SDHAP1,CTD-2012J19.3,RP11-141C7.3,AC024560.3,CTD-2083E4.6,RP11-480A16.3,RP11-43F13.1,RP11-496H1.2,AC069513.4,AC024937.4,RP11-141C7.4,PDCD6-AHRR,
../firstrun/newGeneCopies/PGA5/PGA5_partitions/PGA5_group1.fasta	../firstrun/newGeneCopies/PGA5/PGA5_partitions/PGA5_group1_PGA5OOOCTD-2331C18v5OOOPGA3.fasta	PGA5,CTD-2331C18.5,PGA4,PGA3,
../firstrun/newGeneCopies/RABEP2/RABEP2_partitions/RABEP2_group1.fasta	../firstrun/newGeneCopies/RABEP2/RABEP2_partitions/RABEP2_group1_RABEP2OOOATP2A1OOOCD19.fasta	RP11-231C14.10,ATP2A1,CD19,RABEP2,
../firstrun/newGeneCopies/PBRM1/PBRM1_partitions/PBRM1_group1.fasta	../firstrun/newGeneCopies/PBRM1/PBRM1_partitions/PBRM1_group1_PBRM1OOOENSG10010138968v2OOOENSG10010139083v1.fasta	SMIM4,PBRM1,GNL3,RNU6-856P,ENSG10010139083.1,RNU6ATAC16P,ENSG10010138968.2,
../firstrun/newGeneCopies/RP11-426L16.10/RP11-426L16.10_partitions/RP11-426L16.10_group1.fasta	../firstrun/newGeneCopies/RP11-426L16.10/RP11-426L16.10_partitions/RP11-426L16.10_group1_RP11-426L16v10OOOMOV10OOOPPM1J.fasta	RP11-426L16.10,PPM1J,MOV10,RHOC,RP11-426L16.3,
../firstrun/newGeneCopies/LHFPL4/LHFPL4_partitions/LHFPL4_group1.fasta	../firstrun/newGeneCopies/LHFPL4/LHFPL4_partitions/LHFPL4_group1_LHFPL4.fasta	LHFPL4,
../firstrun/newGeneCopies/VWCE/VWCE_partitions/VWCE_group1.fasta	../firstrun/newGeneCopies/VWCE/VWCE_partitions/VWCE_group1_VWCEOOODDB1.fasta	VWCE,DDB1,
../firstrun/newGeneCopies/ZNF747/ZNF747_partitions/ZNF747_group1.fasta	../firstrun/newGeneCopies/ZNF747/ZNF747_partitions/ZNF747_group1_ZNF747OOOAC002310v10OOOAC002310v11.fasta	AC002310.12,AC002310.4,ZNF768,AC002310.10,AC002310.14,AC002310.11,ZNF747,
../firstrun/newGeneCopies/ANKRD20A/ANKRD20A_partitions/ANKRD20A_group00227901.fasta	../firstrun/newGeneCopies/ANKRD20A/ANKRD20A_partitions/ANKRD20A_group00227901_ANKRD20A1OOOANKRD20A11POOOANKRD20A17P.fasta	CR848007.1,AC097374.2,ANKRD20A21P,CYP4F25P,SNX18P24,RP11-146D12.6,RP11-348N17.2,SNX18P14,RP11-241F15.9,AL513478.2,SNX18P8,RP11-793G16.4,RP11-327I22.7,RP11-250H24.2,ENSG00000278704,ANKRD20A9P,ANKRD20A3P,SNX18P13,SNX18P12,ANKRD20A1,RNU6-538P,SNX18P26,RHOT1P2,FAM95B1,SNX18P4,ANKRD20A11P,ANKRD20A2P,RHOT1P3,RNU6-1269P,RNU6-599P,bP-21264C1.2,ANKRD20A8P,RP11-241F15.7,ANKRD20A5P,BX649567.1,RNU6-1320P,RNU6-316P,RHOT1P1,MTCO3P42,bP-21264C1.1,RP11-757O6.6,RP11-1281K21.8,RP11-146D12.2,RP11-459O16.7,RNU6-55P,SNX18P9,U6,SNX18P5,RNU6-954P,MEP1AP4,RP11-327I22.3,CYP4F60P,LINC00328-2P,MTCO3P39,RP11-241F15.1,RP11-399F4.3,RP11-1277N13.1,RP11-399F4.2,ANKRD20A17P,RNU6-1193P,RP11-1281K21.1,MEP1AP1,RNU6-368P,RP11-681B3.4,SNX18P23,ANKRD20A4P,bP-2189O9.2,ANKRD20A7P,RP11-241F15.3,RP11-115C9.1,
../firstrun/newGeneCopies/GINS1/GINS1_partitions/GINS1_group1.fasta	../firstrun/newGeneCopies/GINS1/GINS1_partitions/GINS1_group1_GINS1OOONINL.fasta	GINS1,NINL,
../firstrun/newGeneCopies/BAHCC1/BAHCC1_partitions/BAHCC1_group1.fasta	../firstrun/newGeneCopies/BAHCC1/BAHCC1_partitions/BAHCC1_group1_BAHCC1OOOMIR3186OOOMIR4740.fasta	RP11-1055B8.8,MIR3186,BAHCC1,RP11-1055B8.1,MIR4740,
../firstrun/newGeneCopies/AGAP5/AGAP5_partitions/AGAP5_group2.fasta	../firstrun/newGeneCopies/AGAP5/AGAP5_partitions/AGAP5_group2_AGAP5OOOBMS1P4-AGAP5OOOAGAP10P.fasta	SYNPO2L-AS1,AGAP5,AGAP7P,AGAP6,AGAP12P,BMS1P4,AGAP10P,BMS1P4-AGAP5,AGAP11,TIMM23B-AGAP6,RP11-144G6.12,RP11-96C23.10,AGAP4,RP11-96C23.5,AGAP13P,RP11-96C23.13,AGAP14P,RP11-144G6.4,AGAP9,RP11-324H6.8,BMS1P3,RP11-96C23.14,
../firstrun/newGeneCopies/CCL7/CCL7_partitions/CCL7_group1.fasta	../firstrun/newGeneCopies/CCL7/CCL7_partitions/CCL7_group1_CCL7.fasta	CCL7,
../firstrun/newGeneCopies/YIF1/YIF1_partitions/YIF1_group3.fasta	../firstrun/newGeneCopies/YIF1/YIF1_partitions/YIF1_group3_YIF1BOOOC19orf33OOOCTB-102L5v4.fasta	CTB-102L5.4,YIF1B,C19orf33,KCNK6,
../firstrun/newGeneCopies/YIF1/YIF1_partitions/YIF1_group1.fasta	../firstrun/newGeneCopies/YIF1/YIF1_partitions/YIF1_group1_YIF1AOOOCNIH2OOOTMEM151A.fasta	TMEM151A,CNIH2,YIF1A,
../firstrun/newGeneCopies/FGF21/FGF21_partitions/FGF21_group1.fasta	../firstrun/newGeneCopies/FGF21/FGF21_partitions/FGF21_group1_FGF21OOOFUT1.fasta	FUT1,FGF21,
../firstrun/newGeneCopies/CALML6/CALML6_partitions/CALML6_group1.fasta	../firstrun/newGeneCopies/CALML6/CALML6_partitions/CALML6_group1_CALML6OOOCFAP74OOOTMEM52.fasta	TMEM52,CALML6,CFAP74,
../firstrun/newGeneCopies/CPT1A/CPT1A_partitions/CPT1A_group1.fasta	../firstrun/newGeneCopies/CPT1A/CPT1A_partitions/CPT1A_group1_CPT1A.fasta	CPT1A,
../firstrun/newGeneCopies/CDH2/CDH2_partitions/CDH2_group1.fasta	../firstrun/newGeneCopies/CDH2/CDH2_partitions/CDH2_group1_CDH2OOOAC015933v2.fasta	CDH2,AC015933.2,
../firstrun/newGeneCopies/CDH2/CDH2_partitions/CDH2_group3.fasta	../firstrun/newGeneCopies/CDH2/CDH2_partitions/CDH2_group3_CDH2OOORP11-430E17v1.fasta	RP11-430E17.1,CDH2,
../firstrun/newGeneCopies/CDH2/CDH2_partitions/CDH2_group2.fasta	../firstrun/newGeneCopies/CDH2/CDH2_partitions/CDH2_group2_CDH2.fasta	CDH2,
../firstrun/newGeneCopies/MAGEA6/MAGEA6_partitions/MAGEA6_group1.fasta	../firstrun/newGeneCopies/MAGEA6/MAGEA6_partitions/MAGEA6_group1_MAGEA6OOOMAGEA6-DTOOOCH17-38B12v4.fasta	MAGEA2B,MAGEA6,CSAG4,RP1-14D6.7,MAGEA3,CSAG1,RP1-14D6.13,CSAG2,CH17-38B12.4,MAGEA12,MAGEA6-DT,CSAG3,MAGEA2,
../firstrun/newGeneCopies/PGA4/PGA4_partitions/PGA4_group1.fasta	../firstrun/newGeneCopies/PGA4/PGA4_partitions/PGA4_group1_PGA4OOOCTD-2331C18v5OOOPGA3.fasta	CTD-2331C18.5,PGA4,PGA3,PGA5,
../firstrun/newGeneCopies/MBOAT/MBOAT_partitions/MBOAT_group14.fasta	../firstrun/newGeneCopies/MBOAT/MBOAT_partitions/MBOAT_group14_MBOAT7OOOTMC4OOOTSEN34.fasta	MBOAT7,TMC4,TSEN34,
../firstrun/newGeneCopies/RNPC3/RNPC3_partitions/RNPC3_group1.fasta	../firstrun/newGeneCopies/RNPC3/RNPC3_partitions/RNPC3_group1_RNPC3OOOAMY2BOOORN7SKP285.fasta	RN7SKP285,AMY2B,RNPC3,RP11-153F1.1,
../firstrun/newGeneCopies/RRAGB/RRAGB_partitions/RRAGB_group1.fasta	../firstrun/newGeneCopies/RRAGB/RRAGB_partitions/RRAGB_group1_RRAGB.fasta	RRAGB,
../firstrun/newGeneCopies/EPHA8/EPHA8_partitions/EPHA8_group1.fasta	../firstrun/newGeneCopies/EPHA8/EPHA8_partitions/EPHA8_group1_EPHA8.fasta	EPHA8,
../firstrun/newGeneCopies/PPARD/PPARD_partitions/PPARD_group2.fasta	../firstrun/newGeneCopies/PPARD/PPARD_partitions/PPARD_group2_PPARD.fasta	PPARD,
../firstrun/newGeneCopies/FOXI3/FOXI3_partitions/FOXI3_group1.fasta	../firstrun/newGeneCopies/FOXI3/FOXI3_partitions/FOXI3_group1_FOXI3.fasta	FOXI3,
../firstrun/newGeneCopies/DPP3/DPP3_partitions/DPP3_group3.fasta	../firstrun/newGeneCopies/DPP3/DPP3_partitions/DPP3_group3_DPP3OOOBBS1OOOCTD-3074O7v11.fasta	DPP3,BBS1,CTD-3074O7.11,PELI3,CTD-3074O7.5,
../firstrun/newGeneCopies/TBC1D3/TBC1D3_partitions/TBC1D3_group4.fasta	../firstrun/newGeneCopies/TBC1D3/TBC1D3_partitions/TBC1D3_group4_TBC1D3OOOTBC1D3BOOOTBC1D3C.fasta	TBC1D3P4,RP11-218M11.3,CTD-2319I12.4,TBC1D3K,5S_rRNA,TBC1D3J,NOS2P1,RP11-46I8.4,TBC1D3,CTD-2319I12.9,RP11-19P22.7,TBC1D3I,RP11-434D2.8,TBC1D29P,TBC1D3E,CH17-8C20.4,RP11-434D2.3,RNFT1P3,CTD-2319I12.3,TBC1D3C,TBC1D3B,RP11-178C3.1,TBC1D3P3,RNA5SP526,DHX40,TBC1D3P1,RP1-37N7.7,RP11-178C3.7,TBC1D3D,TBC1D3P1-DHX40P1,CTB-91J4.1,RNFT1-DT,RP11-428O23.1,DHX40P1,RP11-178C3.9,USP32,RP11-51L5.4,AC015818.5,TBC1D3F,RP11-218M11.1,TBC1D3P5,RP11-19P22.10,USP6,TBC1D3H,RP11-218M11.6,RNFT1,TBC1D3L,RP11-218M11.7,TBC1D3G,TBC1D3P2,
../firstrun/newGeneCopies/GSTP1/GSTP1_partitions/GSTP1_group1.fasta	../firstrun/newGeneCopies/GSTP1/GSTP1_partitions/GSTP1_group1_GSTP1.fasta	GSTP1,
../firstrun/newGeneCopies/NPTX1/NPTX1_partitions/NPTX1_group1.fasta	../firstrun/newGeneCopies/NPTX1/NPTX1_partitions/NPTX1_group1_NPTX1OOOCTD-2526A2v4.fasta	NPTX1,CTD-2526A2.4,
../firstrun/newGeneCopies/ZFP14/ZFP14_partitions/ZFP14_group1.fasta	../firstrun/newGeneCopies/ZFP14/ZFP14_partitions/ZFP14_group1_ZFP14OOOCTD-3162L10v3OOOCTD-3162L10v4.fasta	CTD-3162L10.4,CTD-3162L10.3,ZFP14,LINC00665,
../firstrun/newGeneCopies/IFNL3/IFNL3_partitions/IFNL3_group1.fasta	../firstrun/newGeneCopies/IFNL3/IFNL3_partitions/IFNL3_group1_IFNL3OOOIFNL3P1OOOIFNL2.fasta	IFNL3P1,IFNL4,IFNL3,IFNL2,IFNL4P1,
../firstrun/newGeneCopies/MRPL20/MRPL20_partitions/MRPL20_group1.fasta	../firstrun/newGeneCopies/MRPL20/MRPL20_partitions/MRPL20_group1_MRPL20OOOMRPL20-AS1OOOMRPL20-DT.fasta	MRPL20,MRPL20-AS1,RN7SL657P,ANKRD65,MRPL20-DT,CCNL2,
../firstrun/newGeneCopies/LRP5/LRP5_partitions/LRP5_group1.fasta	../firstrun/newGeneCopies/LRP5/LRP5_partitions/LRP5_group1_LRP5OOOLRP5LOOOCTA-246H3v11.fasta	LRP5L,CTA-246H3.11,LRP5,
../firstrun/newGeneCopies/CCRL2/CCRL2_partitions/CCRL2_group1.fasta	../firstrun/newGeneCopies/CCRL2/CCRL2_partitions/CCRL2_group1_CCRL2OOOCCR5ASOOOLINC02009.fasta	CCR5AS,LINC02009,CCRL2,
../firstrun/newGeneCopies/SRRM2/SRRM2_partitions/SRRM2_group1.fasta	../firstrun/newGeneCopies/SRRM2/SRRM2_partitions/SRRM2_group1_SRRM2OOOSRRM2-AS1OOOELOB.fasta	ELOB,SRRM2-AS1,SRRM2,
../firstrun/newGeneCopies/GAK/GAK_partitions/GAK_group1.fasta	../firstrun/newGeneCopies/GAK/GAK_partitions/GAK_group1_GAKOOORP11-440L14v5OOOTMEM175.fasta	RP11-440L14.5,TMEM175,GAK,
../firstrun/newGeneCopies/KLF11/KLF11_partitions/KLF11_group1.fasta	../firstrun/newGeneCopies/KLF11/KLF11_partitions/KLF11_group1_KLF11OOOCYS1OOORP11-254F7v2.fasta	RP11-254F7.2,CYS1,KLF11,RP11-254F7.3,
../firstrun/newGeneCopies/DYNC2I1/DYNC2I1_partitions/DYNC2I1_group1.fasta	../firstrun/newGeneCopies/DYNC2I1/DYNC2I1_partitions/DYNC2I1_group1_DYNC2I1OOORP4-708P22v1.fasta	RP4-708P22.1,DYNC2I1,
../firstrun/newGeneCopies/FOXF1/FOXF1_partitions/FOXF1_group1.fasta	../firstrun/newGeneCopies/FOXF1/FOXF1_partitions/FOXF1_group1_FOXF1OOOFENDRROOORP11-463O9v9.fasta	FOXF1,FENDRR,RP11-463O9.9,
../firstrun/newGeneCopies/VSIG4/VSIG4_partitions/VSIG4_group1.fasta	../firstrun/newGeneCopies/VSIG4/VSIG4_partitions/VSIG4_group1_VSIG4OOOMIR223OOOMIR223HG.fasta	MIR223HG,VSIG4,MIR223,
../firstrun/newGeneCopies/SPDYE15/SPDYE15_partitions/SPDYE15_group2.fasta	../firstrun/newGeneCopies/SPDYE15/SPDYE15_partitions/SPDYE15_group2_SPDYE15OOOSPDYE15POOOAC004951v6.fasta	SPDYE12P,RP11-514P8.10,POLR2J4,SPDYE14,CH17-264B6.3,SPDYE2B,PMS2P2,SPDYE6,SPDYE14P,CH17-264B6.6,RP5-1022I14.2,CH17-264B6.1,POLR2J3,AC004951.6,SPDYE21,SPDYE11,SPDYE17,SPDYE5,AC004980.9,SPDYE3,PMS2P6,RP5-1165K10.2,DTX2P1-UPK3BP1-PMS2P11,SPDYE10P,PMS2P4,RP11-467H10.2,SPDYE13P,SPDYE15,SPDYE7P,SPDYE16,SPDYE8,RP11-514P8.7,PMS2P8,SPDYE9,SPDYE1,RP11-577H5.5,SPDYE18,SPDYE2,SPDYE15P,PMS2P7,PMS2P1,SPDYE13,PMS2P10,
../firstrun/newGeneCopies/CDKN1A/CDKN1A_partitions/CDKN1A_group1.fasta	../firstrun/newGeneCopies/CDKN1A/CDKN1A_partitions/CDKN1A_group1_CDKN1AOOODINOLOOOLAP3P2.fasta	CDKN1A,PANDAR,LAP3P2,DINOL,
../firstrun/newGeneCopies/HSD11B2/HSD11B2_partitions/HSD11B2_group1.fasta	../firstrun/newGeneCopies/HSD11B2/HSD11B2_partitions/HSD11B2_group1_HSD11B2OOOATP6V0D1OOORP11-297D21v2.fasta	ATP6V0D1,RP11-297D21.2,HSD11B2,
../firstrun/newGeneCopies/BLOC1S3/BLOC1S3_partitions/BLOC1S3_group1.fasta	../firstrun/newGeneCopies/BLOC1S3/BLOC1S3_partitions/BLOC1S3_group1_BLOC1S3OOOAC005779v1OOOAC005779v2.fasta	AC005779.2,AC005779.1,BLOC1S3,TRAPPC6A,EXOC3L2,MARK4,
../firstrun/newGeneCopies/UGT2A/UGT2A_partitions/UGT2A_group6.fasta	../firstrun/newGeneCopies/UGT2A/UGT2A_partitions/UGT2A_group6_UGT2A1OOOUGT2A2OOORP11-401E5v2.fasta	RP11-401E5.2,UGT2A1,UGT2A2,
../firstrun/newGeneCopies/TGFA/TGFA_partitions/TGFA_group1.fasta	../firstrun/newGeneCopies/TGFA/TGFA_partitions/TGFA_group1_TGFAOOOTGFA-IT1.fasta	TGFA-IT1,TGFA,
../firstrun/newGeneCopies/TRIM64/TRIM64_partitions/TRIM64_group2.fasta	../firstrun/newGeneCopies/TRIM64/TRIM64_partitions/TRIM64_group2_TRIM64OOOTRIM64BOOOTRIM64C.fasta	AC009237.8,TRIM51,RP11-72M10.5,RP11-81M19.3,RP11-56P9.4,RP11-738O11.9,TRIM64C,RP11-163O19.11,TRIM64B,TRIM64DP,RP11-738O11.13,RP11-163O19.1,RP11-529A4.7,TRIM64EP,TRIM64,TRIM64FP,RP11-163O19.16,AP006587.1,RP11-56P9.6,RP11-56P9.10,RP11-440D17.3,
../firstrun/newGeneCopies/GDPD3/GDPD3_partitions/GDPD3_group1.fasta	../firstrun/newGeneCopies/GDPD3/GDPD3_partitions/GDPD3_group1_GDPD3OOOMAPK3OOORP11-455F5v3.fasta	RP11-455F5.6,MAPK3,YPEL3,RP11-455F5.4,GDPD3,RP11-455F5.3,
../firstrun/newGeneCopies/BFAR/BFAR_partitions/BFAR_group1.fasta	../firstrun/newGeneCopies/BFAR/BFAR_partitions/BFAR_group1_BFAROOOPARNOOORNU7-125P.fasta	BFAR,U7,RNU7-125P,PARN,
../firstrun/newGeneCopies/TAF13/TAF13_partitions/TAF13_group1.fasta	../firstrun/newGeneCopies/TAF13/TAF13_partitions/TAF13_group1_TAF13.fasta	TAF13,
../firstrun/newGeneCopies/TMEM9/TMEM9_partitions/TMEM9_group31.fasta	../firstrun/newGeneCopies/TMEM9/TMEM9_partitions/TMEM9_group31_TMEM9BOOOTMEM9B-AS1OOONRIP3.fasta	NRIP3,TMEM9B,TMEM9B-AS1,
../firstrun/newGeneCopies/MAPK14/MAPK14_partitions/MAPK14_group3.fasta	../firstrun/newGeneCopies/MAPK14/MAPK14_partitions/MAPK14_group3_MAPK14OOORP1-179N16v3.fasta	MAPK14,RP1-179N16.3,
../firstrun/newGeneCopies/MAPK14/MAPK14_partitions/MAPK14_group1.fasta	../firstrun/newGeneCopies/MAPK14/MAPK14_partitions/MAPK14_group1_MAPK14OOOSLC26A8.fasta	MAPK14,SLC26A8,
../firstrun/newGeneCopies/PCSK9/PCSK9_partitions/PCSK9_group1.fasta	../firstrun/newGeneCopies/PCSK9/PCSK9_partitions/PCSK9_group1_PCSK9OOOUSP24.fasta	PCSK9,USP24,
../firstrun/newGeneCopies/STOML/STOML_partitions/STOML_group1.fasta	../firstrun/newGeneCopies/STOML/STOML_partitions/STOML_group1_STOML2OOOFAM214BOOOPIGO.fasta	STOML2,FAM214B,PIGO,RP11-182N22.8,
../firstrun/newGeneCopies/STOML/STOML_partitions/STOML_group3.fasta	../firstrun/newGeneCopies/STOML/STOML_partitions/STOML_group3_STOML1OOOPML.fasta	STOML1,PML,
../firstrun/newGeneCopies/PPM1F/PPM1F_partitions/PPM1F_group1.fasta	../firstrun/newGeneCopies/PPM1F/PPM1F_partitions/PPM1F_group1_PPM1FOOOPPM1F-AS1OOOIGLV10-54.fasta	IGLVIV-53,TOP3BP1,PPM1F,LL22NC03-123E1.5,PPM1F-AS1,TOP3B,IGLV10-54,
../firstrun/newGeneCopies/FUOM/FUOM_partitions/FUOM_group1.fasta	../firstrun/newGeneCopies/FUOM/FUOM_partitions/FUOM_group1_FUOMOOOECHS1OOOPRAP1.fasta	PRAP1,RP11-122K13.7,ZNF511-PRAP1,FUOM,ECHS1,
../firstrun/newGeneCopies/TBX10/TBX10_partitions/TBX10_group1.fasta	../firstrun/newGeneCopies/TBX10/TBX10_partitions/TBX10_group1_TBX10OOOACY3OOONUDT8.fasta	NUDT8,ACY3,TBX10,
../firstrun/newGeneCopies/APP/APP_partitions/APP_group11.fasta	../firstrun/newGeneCopies/APP/APP_partitions/APP_group11_APPOOOAPP-DTOOOAP001439v2.fasta	RNU6-926P,APP-DT,APP,AP001439.2,
../firstrun/newGeneCopies/APP/APP_partitions/APP_group10.fasta	../firstrun/newGeneCopies/APP/APP_partitions/APP_group10_APP.fasta	APP,
../firstrun/newGeneCopies/APP/APP_partitions/APP_group7.fasta	../firstrun/newGeneCopies/APP/APP_partitions/APP_group7_APP.fasta	APP,
../firstrun/newGeneCopies/APP/APP_partitions/APP_group8.fasta	../firstrun/newGeneCopies/APP/APP_partitions/APP_group8_APPOOOAP001442v2.fasta	AP001442.2,APP,
../firstrun/newGeneCopies/APP/APP_partitions/APP_group9.fasta	../firstrun/newGeneCopies/APP/APP_partitions/APP_group9_APP.fasta	APP,
../firstrun/newGeneCopies/RNF19B/RNF19B_partitions/RNF19B_group1.fasta	../firstrun/newGeneCopies/RNF19B/RNF19B_partitions/RNF19B_group1_RNF19BOOORP5-1174N9v3.fasta	RNF19B,RP5-1174N9.3,
../firstrun/newGeneCopies/NSUN3/NSUN3_partitions/NSUN3_group1.fasta	../firstrun/newGeneCopies/NSUN3/NSUN3_partitions/NSUN3_group1_NSUN3OOODHFR2OOORBBP4P2.fasta	DHFR2,RBBP4P2,NSUN3,
../firstrun/newGeneCopies/SNCA/SNCA_partitions/SNCA_group3.fasta	../firstrun/newGeneCopies/SNCA/SNCA_partitions/SNCA_group3_SNCA.fasta	SNCA,
../firstrun/newGeneCopies/SNCA/SNCA_partitions/SNCA_group1.fasta	../firstrun/newGeneCopies/SNCA/SNCA_partitions/SNCA_group1_SNCAOOORP11-115D19v1OOORP11-582C12v1.fasta	RP11-115D19.1,RP11-582C12.1,SNCA,
../firstrun/newGeneCopies/SNCA/SNCA_partitions/SNCA_group4.fasta	../firstrun/newGeneCopies/SNCA/SNCA_partitions/SNCA_group4_SNCAOOOSNCA-AS1.fasta	SNCA,SNCA-AS1,
../firstrun/newGeneCopies/CTD-2643I7.4/CTD-2643I7.4_partitions/CTD-2643I7.4_group1.fasta	../firstrun/newGeneCopies/CTD-2643I7.4/CTD-2643I7.4_partitions/CTD-2643I7.4_group1_CTD-2643I7v4OOOBGLT3OOOCTD-2643I7v5.fasta	BGLT3,CTD-2643I7.5,HBG1,CTD-2643I7.4,HBG2,
../firstrun/newGeneCopies/ZNF843/ZNF843_partitions/ZNF843_group1.fasta	../firstrun/newGeneCopies/ZNF843/ZNF843_partitions/ZNF843_group1_ZNF843OOOCOX6A2OOORP11-452L6v8.fasta	COX6A2,RP11-452L6.8,ZNF843,
../firstrun/newGeneCopies/TBC1D20/TBC1D20_partitions/TBC1D20_group1.fasta	../firstrun/newGeneCopies/TBC1D20/TBC1D20_partitions/TBC1D20_group1_TBC1D20OOORBCK1OOOY_RNA.fasta	RBCK1,Y_RNA,TBC1D20,
../firstrun/newGeneCopies/TRBV9/TRBV9_partitions/TRBV9_group1.fasta	../firstrun/newGeneCopies/TRBV9/TRBV9_partitions/TRBV9_group1_TRBV9OOOTRBV5-3OOOTRBV7-3.fasta	TRBV8-2,TRBV7-3,TRBV5-3,TRBV9,
../firstrun/newGeneCopies/ATP13A2/ATP13A2_partitions/ATP13A2_group1.fasta	../firstrun/newGeneCopies/ATP13A2/ATP13A2_partitions/ATP13A2_group1_ATP13A2OOORP1-37C10v3OOORP1-37C10v8.fasta	RP1-37C10.8,RP1-37C10.3,ATP13A2,
../firstrun/newGeneCopies/RNASE2/RNASE2_partitions/RNASE2_group1.fasta	../firstrun/newGeneCopies/RNASE2/RNASE2_partitions/RNASE2_group1_RNASE2OOORNASE3OOORP11-219E7v4.fasta	RNASE2,RP11-84C10.2,RP11-84C10.3,RNASE3,RP11-219E7.4,
../firstrun/newGeneCopies/KCNJ18/KCNJ18_partitions/KCNJ18_group1.fasta	../firstrun/newGeneCopies/KCNJ18/KCNJ18_partitions/KCNJ18_group1_KCNJ18OOOKCNJ12.fasta	KCNJ18,KCNJ12,
../firstrun/newGeneCopies/MYLPF/MYLPF_partitions/MYLPF_group1.fasta	../firstrun/newGeneCopies/MYLPF/MYLPF_partitions/MYLPF_group1_MYLPFOOORP11-297C4v6OOOSEPTIN1.fasta	RP11-297C4.6,TBC1D10B,SEPTIN1,MYLPF,ZNF48,
../firstrun/newGeneCopies/MUS81/MUS81_partitions/MUS81_group1.fasta	../firstrun/newGeneCopies/MUS81/MUS81_partitions/MUS81_group1_MUS81OOOCFL1OOOEFEMP2.fasta	CFL1,SNX32,MUS81,EFEMP2,
../firstrun/newGeneCopies/HBG/HBG_partitions/HBG_group1.fasta	../firstrun/newGeneCopies/HBG/HBG_partitions/HBG_group1_HBG1OOOHBG2OOOAC104389v31.fasta	OR51AB1P,OR51B8P,OR51M1,BGLT3,HBE1,AC104389.31,OR51B4,OR51A10P,OR51B3P,OR51I1,HBG1,OR51B2,OR51J1,OR51B6,UBQLN3,OR51K1P,OR51B5,OR51Q1,OR51I2,OR52D1,HBG2,AC104389.32,CTD-2643I7.4,CTD-2643I7.5,
../firstrun/newGeneCopies/DNAJA2/DNAJA2_partitions/DNAJA2_group1.fasta	../firstrun/newGeneCopies/DNAJA2/DNAJA2_partitions/DNAJA2_group1_DNAJA2OOODNAJA2-DT.fasta	DNAJA2-DT,DNAJA2,
../firstrun/newGeneCopies/CLEC4G/CLEC4G_partitions/CLEC4G_group1.fasta	../firstrun/newGeneCopies/CLEC4G/CLEC4G_partitions/CLEC4G_group1_CLEC4GOOOCTD-3214H19v17.fasta	CLEC4G,CTD-3214H19.17,
../firstrun/newGeneCopies/TAF9/TAF9_partitions/TAF9_group2.fasta	../firstrun/newGeneCopies/TAF9/TAF9_partitions/TAF9_group2_TAF9OOOAK6OOORAD17.fasta	AK6,RAD17,TAF9,
../firstrun/newGeneCopies/AFG1L/AFG1L_partitions/AFG1L_group1.fasta	../firstrun/newGeneCopies/AFG1L/AFG1L_partitions/AFG1L_group1_AFG1LOOORNU6-1144P.fasta	AFG1L,RNU6-1144P,
../firstrun/newGeneCopies/AFG1L/AFG1L_partitions/AFG1L_group3.fasta	../firstrun/newGeneCopies/AFG1L/AFG1L_partitions/AFG1L_group3_AFG1LOOORNU6-770POOORP11-72I2v1.fasta	RP3-466I7.1,RP11-72I2.2,RP11-72I2.1,RNU6-770P,AFG1L,
../firstrun/newGeneCopies/AFG1L/AFG1L_partitions/AFG1L_group2.fasta	../firstrun/newGeneCopies/AFG1L/AFG1L_partitions/AFG1L_group2_AFG1LOOORP1-128O3v6.fasta	RP1-128O3.6,AFG1L,
../firstrun/newGeneCopies/AFG1L/AFG1L_partitions/AFG1L_group4.fasta	../firstrun/newGeneCopies/AFG1L/AFG1L_partitions/AFG1L_group4_AFG1LOOORP3-466I7v2.fasta	AFG1L,RP3-466I7.2,
../firstrun/newGeneCopies/PIGW/PIGW_partitions/PIGW_group1.fasta	../firstrun/newGeneCopies/PIGW/PIGW_partitions/PIGW_group1_PIGWOOOMYO19.fasta	MYO19,PIGW,
../firstrun/newGeneCopies/TNNI3/TNNI3_partitions/TNNI3_group11.fasta	../firstrun/newGeneCopies/TNNI3/TNNI3_partitions/TNNI3_group11_TNNI3OOOCTD-2587H24v4OOODNAAF3.fasta	DNAAF3-AS1,TNNT1,DNAAF3,TNNI3,CTD-2587H24.4,
../firstrun/newGeneCopies/CBR3/CBR3_partitions/CBR3_group2.fasta	../firstrun/newGeneCopies/CBR3/CBR3_partitions/CBR3_group2_CBR3OOOCBR3-AS1OOOCTC-336P14v1.fasta	DOP1B,MEMO1P1,RPS9P1,CBR3-AS1,CBR3,MEMO1,RPL3P1,DPY30,CTC-336P14.1,
../firstrun/newGeneCopies/RP11-792A8.5/RP11-792A8.5_partitions/RP11-792A8.5_group1.fasta	../firstrun/newGeneCopies/RP11-792A8.5/RP11-792A8.5_partitions/RP11-792A8.5_group1_RP11-792A8v5OOOAC005077v7OOOAC005077v8.fasta	RP11-792A8.5,GS1-124K5.13,AC005077.8,RP4-756H11.3,GTF2IP7,AC005077.7,LINC00174,RABGEF1,SKP1P1,RPL35P5,TPST1,RP4-756H11.4,KCTD7,GS1-124K5.2,RP11-792A8.4,SAPCD2P3,GS1-124K5.12,RP11-792A8.3,RP11-792A8.1,GTF2IRD1P1,
../firstrun/newGeneCopies/ZNF689/ZNF689_partitions/ZNF689_group1.fasta	../firstrun/newGeneCopies/ZNF689/ZNF689_partitions/ZNF689_group1_ZNF689OOORP11-146F11v2OOORP11-146F11v3.fasta	RP11-146F11.4,RP11-146F11.5,RP11-146F11.3,ZNF689,RP11-146F11.2,
../firstrun/newGeneCopies/CDH15/CDH15_partitions/CDH15_group1.fasta	../firstrun/newGeneCopies/CDH15/CDH15_partitions/CDH15_group1_CDH15OOOLINC02138OOOSLC22A31.fasta	LINC02138,CDH15,SLC22A31,
../firstrun/newGeneCopies/NCAPG2/NCAPG2_partitions/NCAPG2_group1.fasta	../firstrun/newGeneCopies/NCAPG2/NCAPG2_partitions/NCAPG2_group1_NCAPG2.fasta	NCAPG2,
../firstrun/newGeneCopies/ZFP90/ZFP90_partitions/ZFP90_group1.fasta	../firstrun/newGeneCopies/ZFP90/ZFP90_partitions/ZFP90_group1_ZFP90OOORNU4-36POOORP11-615I2v1.fasta	RP11-615I2.1,RNU4-36P,ZFP90,
../firstrun/newGeneCopies/IBA57/IBA57_partitions/IBA57_group1.fasta	../firstrun/newGeneCopies/IBA57/IBA57_partitions/IBA57_group1_IBA57OOOIBA57-DT.fasta	IBA57-DT,IBA57,
../firstrun/newGeneCopies/ZBTB1/ZBTB1_partitions/ZBTB1_group1.fasta	../firstrun/newGeneCopies/ZBTB1/ZBTB1_partitions/ZBTB1_group1_ZBTB1OOOHSPA2OOORP11-973N13v4.fasta	ZBTB25,RP11-973N13.5,HSPA2,RP11-973N13.4,ZBTB1,
../firstrun/newGeneCopies/SV2A/SV2A_partitions/SV2A_group1.fasta	../firstrun/newGeneCopies/SV2A/SV2A_partitions/SV2A_group1_SV2AOOOBOLA1.fasta	BOLA1,SV2A,
../firstrun/newGeneCopies/HIC2/HIC2_partitions/HIC2_group2.fasta	../firstrun/newGeneCopies/HIC2/HIC2_partitions/HIC2_group2_HIC2OOOPI4KAP1OOOPI4KAP2.fasta	PI4KAP2,HIC2,PI4KAP1,
../firstrun/newGeneCopies/SRRT/SRRT_partitions/SRRT_group1.fasta	../firstrun/newGeneCopies/SRRT/SRRT_partitions/SRRT_group1_SRRTOOOACHEOOOTRIP6.fasta	TRIP6,UFSP1,SRRT,ACHE,
../firstrun/newGeneCopies/WARS2/WARS2_partitions/WARS2_group1.fasta	../firstrun/newGeneCopies/WARS2/WARS2_partitions/WARS2_group1_WARS2OOOWARS2-AS1OOOWARS2-IT1.fasta	WARS2,WARS2-IT1,RPS3AP12,RBMX2P3,WARS2-AS1,
../firstrun/newGeneCopies/ZNF511/ZNF511_partitions/ZNF511_group1.fasta	../firstrun/newGeneCopies/ZNF511/ZNF511_partitions/ZNF511_group1_ZNF511OOOZNF511-PRAP1OOOBANF1P2.fasta	FUOM,CALY,RP11-122K13.7,ZNF511-PRAP1,ZNF511,PRAP1,TUBGCP2,BANF1P2,
../firstrun/newGeneCopies/TBX15/TBX15_partitions/TBX15_group1.fasta	../firstrun/newGeneCopies/TBX15/TBX15_partitions/TBX15_group1_TBX15.fasta	TBX15,
../firstrun/newGeneCopies/EHMT2/EHMT2_partitions/EHMT2_group2.fasta	../firstrun/newGeneCopies/EHMT2/EHMT2_partitions/EHMT2_group2_EHMT2OOOEHMT2-AS1OOOC2.fasta	SLC44A4,C2,DASS-36P22.4,EHMT2,ZBTB12,CYP21A2,EHMT2-AS1,DAQB-331I12.5,
../firstrun/newGeneCopies/SRPK1/SRPK1_partitions/SRPK1_group3.fasta	../firstrun/newGeneCopies/SRPK1/SRPK1_partitions/SRPK1_group3_SRPK1.fasta	SRPK1,
../firstrun/newGeneCopies/SRPK1/SRPK1_partitions/SRPK1_group2.fasta	../firstrun/newGeneCopies/SRPK1/SRPK1_partitions/SRPK1_group2_SRPK1OOOLHFPL5.fasta	SRPK1,LHFPL5,
../firstrun/newGeneCopies/PIMREG/PIMREG_partitions/PIMREG_group5.fasta	../firstrun/newGeneCopies/PIMREG/PIMREG_partitions/PIMREG_group5_PIMREGOOOPITPNM3.fasta	PITPNM3,PIMREG,
../firstrun/newGeneCopies/DMRTC1/DMRTC1_partitions/DMRTC1_group1.fasta	../firstrun/newGeneCopies/DMRTC1/DMRTC1_partitions/DMRTC1_group1_DMRTC1OOODMRTC1BOOOFAM226B.fasta	FAM236C,FAM226B,DMRTC1B,FAM236A,FAM236B,DMRTC1,FAM236D,
../firstrun/newGeneCopies/P3H4/P3H4_partitions/P3H4_group1.fasta	../firstrun/newGeneCopies/P3H4/P3H4_partitions/P3H4_group1_P3H4OOOFKBP10.fasta	FKBP10,P3H4,
../firstrun/newGeneCopies/KCNT1/KCNT1_partitions/KCNT1_group1.fasta	../firstrun/newGeneCopies/KCNT1/KCNT1_partitions/KCNT1_group1_KCNT1OOOSOHLH1.fasta	KCNT1,SOHLH1,
../firstrun/newGeneCopies/DPH7/DPH7_partitions/DPH7_group2.fasta	../firstrun/newGeneCopies/DPH7/DPH7_partitions/DPH7_group2_DPH7OOOMRPL41OOOPNPLA7.fasta	PNPLA7,MRPL41,DPH7,
../firstrun/newGeneCopies/ARSB/ARSB_partitions/ARSB_group5.fasta	../firstrun/newGeneCopies/ARSB/ARSB_partitions/ARSB_group5_ARSB.fasta	ARSB,
../firstrun/newGeneCopies/ARSB/ARSB_partitions/ARSB_group4.fasta	../firstrun/newGeneCopies/ARSB/ARSB_partitions/ARSB_group4_ARSB.fasta	ARSB,
../firstrun/newGeneCopies/ARSB/ARSB_partitions/ARSB_group2.fasta	../firstrun/newGeneCopies/ARSB/ARSB_partitions/ARSB_group2_ARSB.fasta	ARSB,
../firstrun/newGeneCopies/RAB44/RAB44_partitions/RAB44_group1.fasta	../firstrun/newGeneCopies/RAB44/RAB44_partitions/RAB44_group1_RAB44.fasta	RAB44,
../firstrun/newGeneCopies/STK19/STK19_partitions/STK19_group1.fasta	../firstrun/newGeneCopies/STK19/STK19_partitions/STK19_group1_STK19OOOSTK19BOOOC4A.fasta	SKIV2L,CYP21A2,TNXA,ENSG00000269167,STK19,C4B,TNXB,DXO,STK19B,DAQB-331I12.15,CYP21A1P,C4A,C4B_2,
../firstrun/newGeneCopies/CASP1/CASP1_partitions/CASP1_group1.fasta	../firstrun/newGeneCopies/CASP1/CASP1_partitions/CASP1_group1_CASP1OOOCARD16OOOCASP5.fasta	CARD16,CASP5,CASP1,
../firstrun/newGeneCopies/PLEKHG4/PLEKHG4_partitions/PLEKHG4_group4.fasta	../firstrun/newGeneCopies/PLEKHG4/PLEKHG4_partitions/PLEKHG4_group4_PLEKHG4OOOKCTD19.fasta	PLEKHG4,KCTD19,
../firstrun/newGeneCopies/NOP53/NOP53_partitions/NOP53_group2.fasta	../firstrun/newGeneCopies/NOP53/NOP53_partitions/NOP53_group2_NOP53OOONOP53-AS1OOOEHD2.fasta	NOP53,NOP53-AS1,SNORD23,EHD2,
../firstrun/newGeneCopies/TMEM230/TMEM230_partitions/TMEM230_group3.fasta	../firstrun/newGeneCopies/TMEM230/TMEM230_partitions/TMEM230_group3_TMEM230OOOPCNAOOORNA5SP474.fasta	PCNA,RP5-1116H23.3,RNA5SP474,TMEM230,Y_RNA,
../firstrun/newGeneCopies/UFD1/UFD1_partitions/UFD1_group2.fasta	../firstrun/newGeneCopies/UFD1/UFD1_partitions/UFD1_group2_UFD1OOOAC000068v10OOOAC000068v5.fasta	UFD1,AC000068.5,CDC45,C22orf39,AC000068.9,AC000068.10,HIRA,
../firstrun/newGeneCopies/ZNF764/ZNF764_partitions/ZNF764_group2.fasta	../firstrun/newGeneCopies/ZNF764/ZNF764_partitions/ZNF764_group2_ZNF764OOOAC002310v4.fasta	ZNF764,AC002310.4,
../firstrun/newGeneCopies/HLA-DQ/HLA-DQ_partitions/HLA-DQ_group84.fasta	../firstrun/newGeneCopies/HLA-DQ/HLA-DQ_partitions/HLA-DQ_group84_HLA-DQA1OOOHLA-DQA2OOOHLA-DQB1.fasta	HLA-DQA1,HLA-DQB3,MIR3135B,XXbac-BPG254F23.7,XXbac-BPG254F23.6,MTCO3P1,HLA-DQA2,HLA-DQB1,HLA-DQB1-AS1,HLA-DQB2,
../firstrun/newGeneCopies/GABBR1/GABBR1_partitions/GABBR1_group3.fasta	../firstrun/newGeneCopies/GABBR1/GABBR1_partitions/GABBR1_group3_GABBR1OOOOR2H5POOOOR2I1P.fasta	OR2I1P,OR2H5P,GABBR1,TMEM183AP1,UBD,
../firstrun/newGeneCopies/GABBR1/GABBR1_partitions/GABBR1_group4.fasta	../firstrun/newGeneCopies/GABBR1/GABBR1_partitions/GABBR1_group4_GABBR1OOOOR2H2OOORPL13AP.fasta	SUMO2P1,GABBR1,RPL13AP,OR2H2,SNORD32B,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group12.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group12_NRXN3OOOCTD-2243E23v1OOORP11-588P7v1.fasta	CTD-2243E23.1,RP11-588P7.2,RP11-588P7.1,NRXN3,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group2.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group2_NRXN3OOORNA5SP388.fasta	RNA5SP388,NRXN3,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group3.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group3_NRXN3OOORPS26P48.fasta	RPS26P48,NRXN3,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group24.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group24_NRXN3OOORP11-242P2v1.fasta	RP11-242P2.1,NRXN3,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group10.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group10_NRXN3OOORP11-232C2v2.fasta	RP11-232C2.2,NRXN3,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group11.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group11_NRXN3.fasta	NRXN3,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group21.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group21_NRXN3OOORP11-242P2v2.fasta	RP11-242P2.2,NRXN3,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group17.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group17_NRXN3.fasta	NRXN3,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group18.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group18_NRXN3.fasta	NRXN3,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group23.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group23_NRXN3OOORP11-242P2v1.fasta	RP11-242P2.1,NRXN3,
../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group22.fasta	../firstrun/newGeneCopies/NRXN3/NRXN3_partitions/NRXN3_group22_NRXN3OOORP11-242P2v1.fasta	RP11-242P2.1,NRXN3,
../firstrun/newGeneCopies/CANT1/CANT1_partitions/CANT1_group1.fasta	../firstrun/newGeneCopies/CANT1/CANT1_partitions/CANT1_group1_CANT1.fasta	CANT1,
../firstrun/newGeneCopies/INSYN1/INSYN1_partitions/INSYN1_group1.fasta	../firstrun/newGeneCopies/INSYN1/INSYN1_partitions/INSYN1_group1_INSYN1OOOINSYN1-AS1.fasta	INSYN1-AS1,INSYN1,
../firstrun/newGeneCopies/SSX4/SSX4_partitions/SSX4_group1.fasta	../firstrun/newGeneCopies/SSX4/SSX4_partitions/SSX4_group1_SSX4OOOSSX4BOOOAF196972v3.fasta	SSXP3,SSX4,RP11-552J9.12,SSXP1,S100A11P6,RP11-344N17.9,RP11-552J9.9,SSXP4,SSX9P,RP13-77O11.8,RP11-552E4.3,SSX2B,RP11-38O23.4,RP11-552E4.2,AF196972.3,SSX6P,SSX4B,SSX5,AF196972.4,SSX7,SSX8P,RP11-344N17.11,SSX3,RP11-344N17.6,SSXP9,SSXP5,RP11-552J9.6,SSX1,RP11-344N17.8,RP11-344N17.12,SSX2,RP11-344N17.3,
../firstrun/newGeneCopies/RPRD2/RPRD2_partitions/RPRD2_group1.fasta	../firstrun/newGeneCopies/RPRD2/RPRD2_partitions/RPRD2_group1_RPRD2.fasta	RPRD2,
../firstrun/newGeneCopies/RPRD2/RPRD2_partitions/RPRD2_group3.fasta	../firstrun/newGeneCopies/RPRD2/RPRD2_partitions/RPRD2_group3_RPRD2.fasta	RPRD2,
../firstrun/newGeneCopies/LIG1/LIG1_partitions/LIG1_group1.fasta	../firstrun/newGeneCopies/LIG1/LIG1_partitions/LIG1_group1_LIG1OOOCTC-453G23v4OOOCTC-453G23v5.fasta	LIG1,CTC-453G23.5,ZSWIM9,CTC-453G23.4,
../firstrun/newGeneCopies/DEFB126/DEFB126_partitions/DEFB126_group1.fasta	../firstrun/newGeneCopies/DEFB126/DEFB126_partitions/DEFB126_group1_DEFB126.fasta	DEFB126,
../firstrun/newGeneCopies/ZNF138/ZNF138_partitions/ZNF138_group1.fasta	../firstrun/newGeneCopies/ZNF138/ZNF138_partitions/ZNF138_group1_ZNF138OOOLINC01287OOORP11-797H7v1.fasta	ZNF138,RP11-797H7.1,LINC01287,
../firstrun/newGeneCopies/TNF/TNF_partitions/TNF_group19.fasta	../firstrun/newGeneCopies/TNF/TNF_partitions/TNF_group19_TNFOOOLST1OOOLTA.fasta	LTA,LST1,LTB,TNF,NCR3,
../firstrun/newGeneCopies/PELI3/PELI3_partitions/PELI3_group1.fasta	../firstrun/newGeneCopies/PELI3/PELI3_partitions/PELI3_group1_PELI3OOOCTD-3074O7v5OOODPP3.fasta	PELI3,CTD-3074O7.5,MRPL11,DPP3,
../firstrun/newGeneCopies/NCF1/NCF1_partitions/NCF1_group1.fasta	../firstrun/newGeneCopies/NCF1/NCF1_partitions/NCF1_group1_NCF1OOONCF1BOOONCF1C.fasta	NCF1C,NCF1,NCF1B,
../firstrun/newGeneCopies/CD38/CD38_partitions/CD38_group15.fasta	../firstrun/newGeneCopies/CD38/CD38_partitions/CD38_group15_CD38.fasta	CD38,
../firstrun/newGeneCopies/CD38/CD38_partitions/CD38_group16.fasta	../firstrun/newGeneCopies/CD38/CD38_partitions/CD38_group16_CD38.fasta	CD38,
../firstrun/newGeneCopies/NAT8L/NAT8L_partitions/NAT8L_group1.fasta	../firstrun/newGeneCopies/NAT8L/NAT8L_partitions/NAT8L_group1_NAT8LOOOPOLN.fasta	POLN,NAT8L,
../firstrun/newGeneCopies/PDE7A/PDE7A_partitions/PDE7A_group3.fasta	../firstrun/newGeneCopies/PDE7A/PDE7A_partitions/PDE7A_group3_PDE7AOOOPDE7A-DT.fasta	PDE7A-DT,PDE7A,
../firstrun/newGeneCopies/PDE7A/PDE7A_partitions/PDE7A_group1.fasta	../firstrun/newGeneCopies/PDE7A/PDE7A_partitions/PDE7A_group1_PDE7AOOOMTFR1OOORP11-707M3v3.fasta	PDE7A,RP11-707M3.3,MTFR1,
../firstrun/newGeneCopies/PLK5/PLK5_partitions/PLK5_group1.fasta	../firstrun/newGeneCopies/PLK5/PLK5_partitions/PLK5_group1_PLK5OOOADAMTSL5OOOCTB-25B13v9.fasta	CTB-25B13.9,ADAMTSL5,PLK5,
../firstrun/newGeneCopies/AC008079.12/AC008079.12_partitions/AC008079.12_group1.fasta	../firstrun/newGeneCopies/AC008079.12/AC008079.12_partitions/AC008079.12_group1_AC008079v12OOOAC008079v10OOOARL2BPP10.fasta	TUBA8,XXbac-B476C20.9,AC008079.12,XXbac-B476C20.10,PEX26,AC008079.10,XXbac-B476C20.11,ARL2BPP10,
../firstrun/newGeneCopies/GPI/GPI_partitions/GPI_group1.fasta	../firstrun/newGeneCopies/GPI/GPI_partitions/GPI_group1_GPIHBP1.fasta	GPIHBP1,
../firstrun/newGeneCopies/GPI/GPI_partitions/GPI_group2.fasta	../firstrun/newGeneCopies/GPI/GPI_partitions/GPI_group2_GPIOOOAC010504v2OOOGARRE1.fasta	GARRE1,GPI,RP11-618P17.4,AC010504.2,PDCD2L,
../firstrun/newGeneCopies/PGGHG/PGGHG_partitions/PGGHG_group1.fasta	../firstrun/newGeneCopies/PGGHG/PGGHG_partitions/PGGHG_group1_PGGHGOOOIFITM2OOOIFITM5.fasta	PGGHG,NLRP6,RP11-326C3.4,IFITM2,RP11-326C3.2,IFITM5,
../firstrun/newGeneCopies/ARL17/ARL17_partitions/ARL17_group2.fasta	../firstrun/newGeneCopies/ARL17/ARL17_partitions/ARL17_group2_ARL17AOOOARL17BOOOAC005562v1.fasta	ARL17B,RN7SL270P,CTD-3199J23.6,RP11-583F2.1,RP11-242D8.1,RN7SL404P,RP11-57A24.2,DND1P1,RP11-927P21.1,RP11-640N20.5,RP11-1070B7.2,RP11-156P1.2,RP11-798G7.6,SH3GL1P1,NSFP1,SH3GL1P2,PLEKHM1,RN7SL656P,RP11-640N20.1,RP11-640N20.6,RP11-927P21.7,RP11-927P21.2,BPTF,RP11-798G7.8,NBR2,RP11-271K11.5,AC005562.1,AC135721.3,RP11-156P1.3,RP11-927P21.9,FAM215B,RP11-619A10.2,LRRC37A4P,RP11-707O23.6,RP11-619A10.1,RDM1P4,RP11-848P1.9,LRRC37B,Metazoa_SRP,RP11-798G7.5,LRRC37A17P,LRRC37A,LRRC37A3,RP11-927P21.8,RP11-855A2.1,RP11-640N20.8,RDM1P2,RN7SL199P,RP11-798G7.7,RP11-640N20.4,BRCA1,ARL17A,LRRC37BP1,RDM1P1,LRRC37A2,
../firstrun/newGeneCopies/REEP6/REEP6_partitions/REEP6_group1.fasta	../firstrun/newGeneCopies/REEP6/REEP6_partitions/REEP6_group1_REEP6OOOPCSK4.fasta	REEP6,PCSK4,
../firstrun/newGeneCopies/ABCD1/ABCD1_partitions/ABCD1_group12.fasta	../firstrun/newGeneCopies/ABCD1/ABCD1_partitions/ABCD1_group12_ABCD1OOOABCD1P2OOOABCD1P3.fasta	ABCD1P3,BCAP31,ABCD1P5,ABCD1P2,ABCD1P4,U52111.14,ABCD1,
../firstrun/newGeneCopies/ITPRIPL1/ITPRIPL1_partitions/ITPRIPL1_group1.fasta	../firstrun/newGeneCopies/ITPRIPL1/ITPRIPL1_partitions/ITPRIPL1_group1_ITPRIPL1OOOAC021188v4OOOSNRNP200.fasta	ITPRIPL1,SNRNP200,AC021188.4,
../firstrun/newGeneCopies/ABCD2/ABCD2_partitions/ABCD2_group1.fasta	../firstrun/newGeneCopies/ABCD2/ABCD2_partitions/ABCD2_group1_ABCD2OOORP11-242C24v4.fasta	ABCD2,RP11-242C24.4,
../firstrun/newGeneCopies/ZNF730/ZNF730_partitions/ZNF730_group10.fasta	../firstrun/newGeneCopies/ZNF730/ZNF730_partitions/ZNF730_group10_ZNF730OOOBNIP3P37OOOCTD-2291D10v4.fasta	RP11-369G6.2,SNX6P1,ZNF730,CTD-2291D10.4,BNIP3P37,
../firstrun/newGeneCopies/ELAPOR1/ELAPOR1_partitions/ELAPOR1_group2.fasta	../firstrun/newGeneCopies/ELAPOR1/ELAPOR1_partitions/ELAPOR1_group2_ELAPOR1OOOC1orf194.fasta	ELAPOR1,C1orf194,
../firstrun/newGeneCopies/TMEM191/TMEM191_partitions/TMEM191_group3.fasta	../firstrun/newGeneCopies/TMEM191/TMEM191_partitions/TMEM191_group3_TMEM191AOOOTMEM191BOOOTMEM191C.fasta	TMEM191A,RN7SL280P,TMEM191C,PI4KAP1,YPEL1,TMEM191B,Metazoa_SRP,KB-1440D3.21,BCRP5,POM121L4P,XXbac-B33L19.15,PI4KAP2,PI4KA,
../firstrun/newGeneCopies/SPN/SPN_partitions/SPN_group1.fasta	../firstrun/newGeneCopies/SPN/SPN_partitions/SPN_group1_SPNS1OOOLATOOORP11-231C14v10.fasta	LAT,RP11-264B17.3,SPNS1,RP11-264B17.5,RP11-231C14.10,RP11-264B17.4,
../firstrun/newGeneCopies/SPN/SPN_partitions/SPN_group2.fasta	../firstrun/newGeneCopies/SPN/SPN_partitions/SPN_group2_SPNOOOAC009086v2OOOQPRT.fasta	AC009086.2,SPN,QPRT,
../firstrun/newGeneCopies/NDUFV1/NDUFV1_partitions/NDUFV1_group92.fasta	../firstrun/newGeneCopies/NDUFV1/NDUFV1_partitions/NDUFV1_group92_NDUFV1OOOC11orf72OOODOC2GP.fasta	C11orf72,RP11-655M14.12,NDUFV1,DOC2GP,
../firstrun/newGeneCopies/SS18L2/SS18L2_partitions/SS18L2_group1.fasta	../firstrun/newGeneCopies/SS18L2/SS18L2_partitions/SS18L2_group1_SS18L2OOOSEC22C.fasta	SEC22C,SS18L2,
../firstrun/newGeneCopies/WDR87/WDR87_partitions/WDR87_group2.fasta	../firstrun/newGeneCopies/WDR87/WDR87_partitions/WDR87_group2_WDR87OOOSIPA1L3.fasta	SIPA1L3,WDR87,
../firstrun/newGeneCopies/CCDC17/CCDC17_partitions/CCDC17_group1.fasta	../firstrun/newGeneCopies/CCDC17/CCDC17_partitions/CCDC17_group1_CCDC17OOOGPBP1L1OOONASP.fasta	NASP,CCDC17,GPBP1L1,
../firstrun/newGeneCopies/CCM2L/CCM2L_partitions/CCM2L_group1.fasta	../firstrun/newGeneCopies/CCM2L/CCM2L_partitions/CCM2L_group1_CCM2LOOORNA5SP481OOORP1-310O13v7.fasta	RP1-310O13.7,RNA5SP481,CCM2L,
../firstrun/newGeneCopies/TPGS1/TPGS1_partitions/TPGS1_group1.fasta	../firstrun/newGeneCopies/TPGS1/TPGS1_partitions/TPGS1_group1_TPGS1OOOMADCAM1OOOMADCAM1-AS1.fasta	TPGS1,MADCAM1,MADCAM1-AS1,
../firstrun/newGeneCopies/DAZ/DAZ_partitions/DAZ_group7.fasta	../firstrun/newGeneCopies/DAZ/DAZ_partitions/DAZ_group7_DAZ1OOODAZ2OOODAZ3.fasta	DAZ4,DAZ1,DAZ2,DAZ3,
../firstrun/newGeneCopies/DAZ/DAZ_partitions/DAZ_group2.fasta	../firstrun/newGeneCopies/DAZ/DAZ_partitions/DAZ_group2_DAZL.fasta	DAZL,
../firstrun/newGeneCopies/HERC2/HERC2_partitions/HERC2_group00731601.fasta	../firstrun/newGeneCopies/HERC2/HERC2_partitions/HERC2_group00731601_HERC2OOOHERC2P1OOOHERC2P10.fasta	HERC2P11,RP11-586K12.4,RP11-67H24.2,RP11-578F21.2,HERC2P9,CH17-184J24.1,HERC2P5,HERC2P1,RP11-586K12.5,HERC2P2,RP11-56L13.4,IGHV2OR16-5,RP11-56L13.3,ENSG00000288480,HERC2,HERC2P7,RP11-578F21.1,RP11-56L13.8,HERC2P4,HERC2P6,RP11-67H24.3,RP11-586K12.1,RP11-586K12.2,RP11-17M15.1,HERC2P3,RP11-989E6.1,RP11-19N8.7,RP11-19N8.6,RP11-467L19.8,ENSG00000278510,RP11-536P16.2,ENSG00000288423,HERC2P8,ENSG00000274700,HERC2P10,RPL41P2,RP11-1166P10.7,RP11-19N8.4,RP11-67H24.1,
../firstrun/newGeneCopies/EGF/EGF_partitions/EGF_group19.fasta	../firstrun/newGeneCopies/EGF/EGF_partitions/EGF_group19_EGFL7OOOAGPAT2OOOMIR126.fasta	EGFL7,AGPAT2,RP11-251M1.1,MIR126,
../firstrun/newGeneCopies/MYO5B/MYO5B_partitions/MYO5B_group15.fasta	../firstrun/newGeneCopies/MYO5B/MYO5B_partitions/MYO5B_group15_MYO5B.fasta	MYO5B,
../firstrun/newGeneCopies/MYO5B/MYO5B_partitions/MYO5B_group14.fasta	../firstrun/newGeneCopies/MYO5B/MYO5B_partitions/MYO5B_group14_MYO5BOOORNA5SP457OOORP11-813F20v4.fasta	RP11-813F20.4,MYO5B,RNA5SP457,
../firstrun/newGeneCopies/MYO5B/MYO5B_partitions/MYO5B_group17.fasta	../firstrun/newGeneCopies/MYO5B/MYO5B_partitions/MYO5B_group17_MYO5B.fasta	MYO5B,
../firstrun/newGeneCopies/MYO5B/MYO5B_partitions/MYO5B_group16.fasta	../firstrun/newGeneCopies/MYO5B/MYO5B_partitions/MYO5B_group16_MYO5BOOORP11-689E3v2.fasta	RP11-689E3.2,MYO5B,
../firstrun/newGeneCopies/ZNF496/ZNF496_partitions/ZNF496_group1.fasta	../firstrun/newGeneCopies/ZNF496/ZNF496_partitions/ZNF496_group1_ZNF496OOOY_RNA.fasta	ZNF496,Y_RNA,
../firstrun/newGeneCopies/SPANXN5/SPANXN5_partitions/SPANXN5_group2.fasta	../firstrun/newGeneCopies/SPANXN5/SPANXN5_partitions/SPANXN5_group2_SPANXN5OOORP11-485B17v3OOORP13-77O11v12.fasta	SPANXN5,RP11-485B17.3,RP13-77O11.12,SSX2B,
../firstrun/newGeneCopies/ALPK3/ALPK3_partitions/ALPK3_group1.fasta	../firstrun/newGeneCopies/ALPK3/ALPK3_partitions/ALPK3_group1_ALPK3OOOENSG10010137853v1.fasta	ENSG10010137853.1,ALPK3,
../firstrun/newGeneCopies/NUP58/NUP58_partitions/NUP58_group4.fasta	../firstrun/newGeneCopies/NUP58/NUP58_partitions/NUP58_group4_NUP58OOORP11-271M24v2.fasta	NUP58,RP11-271M24.2,
../firstrun/newGeneCopies/FADD/FADD_partitions/FADD_group1.fasta	../firstrun/newGeneCopies/FADD/FADD_partitions/FADD_group1_FADDOOORP11-805J14v5.fasta	FADD,RP11-805J14.5,
../firstrun/newGeneCopies/FOXD3/FOXD3_partitions/FOXD3_group2.fasta	../firstrun/newGeneCopies/FOXD3/FOXD3_partitions/FOXD3_group2_FOXD3OOOFOXD3-AS1OOOLINC00466.fasta	LINC00466,FOXD3,FOXD3-AS1,MIR6068,
../firstrun/newGeneCopies/ASB17/ASB17_partitions/ASB17_group1.fasta	../firstrun/newGeneCopies/ASB17/ASB17_partitions/ASB17_group1_ASB17OOORP11-550H2v1.fasta	ASB17,RP11-550H2.1,
../firstrun/newGeneCopies/SPDYE16/SPDYE16_partitions/SPDYE16_group1.fasta	../firstrun/newGeneCopies/SPDYE16/SPDYE16_partitions/SPDYE16_group1_SPDYE16OOOAC004951v6OOOAC004980v9.fasta	PMS2P10,RP11-577H5.5,SPDYE7P,CH17-264B6.1,PMS2P1,SPDYE12P,SPDYE15P,SPDYE20P,SPDYE14P,PMS2P8,SPDYE9,SPDYE13,SPDYE15,PMS2P6,SPDYE10P,SPDYE11,SPDYE16,PMS2P4,RP11-514P8.7,SPDYE5,POLR2J3,POLR2J4,SPDYE18,SPDYE14,CH17-264B6.6,PMS2CL,AC004951.6,SPDYE13P,PMS2P2,DTX2P1-UPK3BP1-PMS2P11,SPDYE19P,RNF216P1,RP11-467H10.2,SPDYE6,SPDYE3,POLR2J2,SPDYE17,SPDYE2,PMS2P7,SPDYE2B,RP5-1022I14.2,SPDYE21,PRR11,SPDYE22P,RBAK-RBAKDN,SPDYE1,RP11-514P8.10,AC004980.9,CH17-264B6.3,RP5-1165K10.2,SPDYE8,
../firstrun/newGeneCopies/ARFGAP3/ARFGAP3_partitions/ARFGAP3_group1.fasta	../firstrun/newGeneCopies/ARFGAP3/ARFGAP3_partitions/ARFGAP3_group1_ARFGAP3OOOAL049758v2OOOPACSIN2.fasta	PACSIN2,ARFGAP3,AL049758.2,RP1-47A17.1,
../firstrun/newGeneCopies/KNG1/KNG1_partitions/KNG1_group1.fasta	../firstrun/newGeneCopies/KNG1/KNG1_partitions/KNG1_group1_KNG1OOORP11-573D15v8.fasta	RP11-573D15.8,KNG1,
../firstrun/newGeneCopies/CTAGE8/CTAGE8_partitions/CTAGE8_group2.fasta	../firstrun/newGeneCopies/CTAGE8/CTAGE8_partitions/CTAGE8_group2_CTAGE8OOOAC073264v6OOOARHGEF34P.fasta	ARHGEF34P,ENPP3,ENSG00000285408,CTAGE6,RP4-798C17.7,ARHGEF35-AS1,CTAGE15,CTAGE4,ENSG00000284912,RNU6-267P,OR2AO1P,RNU6-162P,ARHGEF35,CTAGE8,OR2A7,AC073264.6,CTAGE9,
../firstrun/newGeneCopies/SMAD4/SMAD4_partitions/SMAD4_group2.fasta	../firstrun/newGeneCopies/SMAD4/SMAD4_partitions/SMAD4_group2_SMAD4OOORP11-729L2v2.fasta	RP11-729L2.2,SMAD4,
../firstrun/newGeneCopies/MTA1/MTA1_partitions/MTA1_group1.fasta	../firstrun/newGeneCopies/MTA1/MTA1_partitions/MTA1_group1_MTA1OOOCRIP2OOORP11-521B24v3.fasta	RP11-521B24.5,CRIP2,MTA1,RP11-521B24.3,TEX22,
../firstrun/newGeneCopies/BIRC7/BIRC7_partitions/BIRC7_group1.fasta	../firstrun/newGeneCopies/BIRC7/BIRC7_partitions/BIRC7_group1_BIRC7OOOMIR3196OOONKAIN4.fasta	MIR3196,BIRC7,NKAIN4,
../firstrun/newGeneCopies/RAB32/RAB32_partitions/RAB32_group1.fasta	../firstrun/newGeneCopies/RAB32/RAB32_partitions/RAB32_group1_RAB32.fasta	RAB32,
../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group2.fasta	../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group2_MTMR11OOOOTUD7BOOOSF3B4.fasta	MTMR11,SF3B4,OTUD7B,
../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group19.fasta	../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group19_MTMR3OOOHORMAD2-AS1OOOMIR6818.fasta	RP3-394A18.1,HORMAD2-AS1,MIR6818,MTMR3,RNU6-331P,
../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group15.fasta	../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group15_MTMR6.fasta	MTMR6,
../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group41.fasta	../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group41_MTMR8OOOKPNA4P1.fasta	KPNA4P1,MTMR8,
../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group17.fasta	../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group17_MTMR10OOOFAN1OOORNU6-466P.fasta	RNU6-466P,MTMR10,FAN1,RP11-348B17.1,U6,
../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group43.fasta	../firstrun/newGeneCopies/MTMR/MTMR_partitions/MTMR_group43_MTMR8.fasta	MTMR8,
../firstrun/newGeneCopies/AQP12/AQP12_partitions/AQP12_group1.fasta	../firstrun/newGeneCopies/AQP12/AQP12_partitions/AQP12_group1_AQP12AOOOAQP12BOOOAC011298v2.fasta	AQP12B,AQP12A,AC011298.2,RP11-118M12.2,
../firstrun/newGeneCopies/CAPNS/CAPNS_partitions/CAPNS_group3.fasta	../firstrun/newGeneCopies/CAPNS/CAPNS_partitions/CAPNS_group3_CAPNS1OOOAD001527v7OOOCOX7A1.fasta	CAPNS1,COX7A1,AD001527.7,
../firstrun/newGeneCopies/CAPNS/CAPNS_partitions/CAPNS_group2.fasta	../firstrun/newGeneCopies/CAPNS/CAPNS_partitions/CAPNS_group2_CAPNS2OOOLPCAT2.fasta	LPCAT2,CAPNS2,
../firstrun/newGeneCopies/CTDSPL/CTDSPL_partitions/CTDSPL_group3.fasta	../firstrun/newGeneCopies/CTDSPL/CTDSPL_partitions/CTDSPL_group3_CTDSPLOOOMIR26A1.fasta	MIR26A1,CTDSPL,
../firstrun/newGeneCopies/CTDSPL/CTDSPL_partitions/CTDSPL_group2.fasta	../firstrun/newGeneCopies/CTDSPL/CTDSPL_partitions/CTDSPL_group2_CTDSPL.fasta	CTDSPL,
../firstrun/newGeneCopies/CTDSPL/CTDSPL_partitions/CTDSPL_group1.fasta	../firstrun/newGeneCopies/CTDSPL/CTDSPL_partitions/CTDSPL_group1_CTDSPLOOOITGA9-AS1.fasta	CTDSPL,ITGA9-AS1,
../firstrun/newGeneCopies/SFXN4/SFXN4_partitions/SFXN4_group2.fasta	../firstrun/newGeneCopies/SFXN4/SFXN4_partitions/SFXN4_group2_SFXN4OOODENND10OOOPRDX3.fasta	DENND10,SFXN4,PRDX3,
../firstrun/newGeneCopies/ICE1/ICE1_partitions/ICE1_group1.fasta	../firstrun/newGeneCopies/ICE1/ICE1_partitions/ICE1_group1_ICE1OOORP11-531A21v6.fasta	ICE1,RP11-531A21.6,
../firstrun/newGeneCopies/HSD17B/HSD17B_partitions/HSD17B_group3.fasta	../firstrun/newGeneCopies/HSD17B/HSD17B_partitions/HSD17B_group3_HSD17B7OOOHSD17B7P2OOOPLD5P1.fasta	PLD5P1,HSD17B7P2,HSD17B7,
../firstrun/newGeneCopies/HSD17B/HSD17B_partitions/HSD17B_group49.fasta	../firstrun/newGeneCopies/HSD17B/HSD17B_partitions/HSD17B_group49_HSD17B1OOOHSD17B1-AS1OOOHSD17B1P1.fasta	NAGLU,HSD17B1P1,RP11-400F19.8,HSD17B1,HSD17B1-AS1,
../firstrun/newGeneCopies/RP5-1091N2.12/RP5-1091N2.12_partitions/RP5-1091N2.12_group1.fasta	../firstrun/newGeneCopies/RP5-1091N2.12/RP5-1091N2.12_partitions/RP5-1091N2.12_group1_RP5-1091N2v12OOOCXorf65OOOFOXO4.fasta	FOXO4,RP5-1091N2.12,IL2RG,CXorf65,
../firstrun/newGeneCopies/LCN9/LCN9_partitions/LCN9_group1.fasta	../firstrun/newGeneCopies/LCN9/LCN9_partitions/LCN9_group1_LCN9.fasta	LCN9,
../firstrun/newGeneCopies/TPRN/TPRN_partitions/TPRN_group1.fasta	../firstrun/newGeneCopies/TPRN/TPRN_partitions/TPRN_group1_TPRNOOONDOR1OOOSSNA1.fasta	TMEM203,NDOR1,TPRN,SSNA1,
../firstrun/newGeneCopies/CBR1/CBR1_partitions/CBR1_group1.fasta	../firstrun/newGeneCopies/CBR1/CBR1_partitions/CBR1_group1_CBR1OOOAP000688v14OOORNU6-992P.fasta	SETD4-AS1,RNU6-992P,CBR1,AP000688.14,SETD4,
../firstrun/newGeneCopies/MTIF3/MTIF3_partitions/MTIF3_group2.fasta	../firstrun/newGeneCopies/MTIF3/MTIF3_partitions/MTIF3_group2_MTIF3OOOGTF3A.fasta	MTIF3,GTF3A,
../firstrun/newGeneCopies/CXXC1/CXXC1_partitions/CXXC1_group1.fasta	../firstrun/newGeneCopies/CXXC1/CXXC1_partitions/CXXC1_group1_CXXC1OOOMBD1.fasta	MBD1,CXXC1,
../firstrun/newGeneCopies/TMEM108/TMEM108_partitions/TMEM108_group1.fasta	../firstrun/newGeneCopies/TMEM108/TMEM108_partitions/TMEM108_group1_TMEM108OOORP11-469L4v1.fasta	TMEM108,RP11-469L4.1,
../firstrun/newGeneCopies/TMEM108/TMEM108_partitions/TMEM108_group4.fasta	../firstrun/newGeneCopies/TMEM108/TMEM108_partitions/TMEM108_group4_TMEM108OOOBFSP2.fasta	TMEM108,BFSP2,
../firstrun/newGeneCopies/RP11-826N14.7/RP11-826N14.7_partitions/RP11-826N14.7_group1.fasta	../firstrun/newGeneCopies/RP11-826N14.7/RP11-826N14.7_partitions/RP11-826N14.7_group1_RP11-826N14v7OOOFAM153AOOOFAM153B.fasta	FAM153DP,FAM153B,RP11-844P9.6,RP11-1101H11.1,RP11-652G5.2,RP11-423H2.1,FAM153CP,RP11-826N14.8,RP11-844P9.5,RP11-844P9.2,RP11-1026M7.2,FAM153A,RP11-1026M7.3,RP11-826N14.7,THOC3,RP11-826N14.2,RP11-826N14.1,RP11-844P9.1,
../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group30.fasta	../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group30_ATP6V0E2OOOATP6V0E2-AS1OOOACTR3B.fasta	ATP6V0E2-AS1,RP11-728K20.1,RP11-728K20.3,RP11-445N20.2,ATP6V0E2,RP11-445N20.3,ACTR3B,ZNF862,
../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group55.fasta	../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group55_ATP6V0D1OOOATP6V0D1-DTOOOAGRP.fasta	AGRP,ATP6V0D1-DT,ATP6V0D1,HSD11B2,
../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group37.fasta	../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group37_ATP6V0D2OOOPSKH2OOORP11-216N21v1.fasta	RP11-216N21.1,PSKH2,ATP6V0D2,RPL32P4,
../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group38.fasta	../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group38_ATP6V0D2OOOCTD-3118D11v2.fasta	ATP6V0D2,CTD-3118D11.2,
../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group39.fasta	../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group39_ATP6V0D2OOOCTD-3118D11v2.fasta	ATP6V0D2,CTD-3118D11.2,
../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group23.fasta	../firstrun/newGeneCopies/ATP6V/ATP6V_partitions/ATP6V_group23_ATP6V1G2OOOATP6V1G2-DDX39BOOODASS-161H22v6.fasta	SNORD117,RPL15P4,PPIAP9,SNORD84,NFKBIL1,DASS-161H22.6,MCCD1,DDX39B-AS1,DDX39B,ATP6V1G2,ATP6V1G2-DDX39B,
../firstrun/newGeneCopies/MSTO1/MSTO1_partitions/MSTO1_group1.fasta	../firstrun/newGeneCopies/MSTO1/MSTO1_partitions/MSTO1_group1_MSTO1OOOGON4LOOOMSTO2P.fasta	RP11-29H23.4,RP11-29H23.5,MSTO1,MSTO2P,GON4L,
../firstrun/newGeneCopies/ZFAND2A/ZFAND2A_partitions/ZFAND2A_group1.fasta	../firstrun/newGeneCopies/ZFAND2A/ZFAND2A_partitions/ZFAND2A_group1_ZFAND2AOOOZFAND2A-DT.fasta	ZFAND2A,ZFAND2A-DT,
../firstrun/newGeneCopies/DHX40/DHX40_partitions/DHX40_group1.fasta	../firstrun/newGeneCopies/DHX40/DHX40_partitions/DHX40_group1_DHX40OOODHX40P1OOOTBC1D3P1-DHX40P1.fasta	RP11-178C3.1,TBC1D3G,TBC1D3P1-DHX40P1,5S_rRNA,DHX40,TBC1D3E,USP32,RNFT1-DT,TBC1D3D,RNA5SP526,TBC1D3K,DHX40P1,
../firstrun/newGeneCopies/FAM83/FAM83_partitions/FAM83_group6.fasta	../firstrun/newGeneCopies/FAM83/FAM83_partitions/FAM83_group6_FAM83GOOORP11-28B23v1OOOSLC5A10.fasta	FAM83G,RP11-28B23.1,SLC5A10,
../firstrun/newGeneCopies/FAM83/FAM83_partitions/FAM83_group7.fasta	../firstrun/newGeneCopies/FAM83/FAM83_partitions/FAM83_group7_FAM83EOOOAC022154v7OOOCTC-273B12v13.fasta	AC022154.7,SULT2B1,FAM83E,RPL18,SPACA4,CTC-273B12.13,SPHK2,
../firstrun/newGeneCopies/ALG10/ALG10_partitions/ALG10_group1.fasta	../firstrun/newGeneCopies/ALG10/ALG10_partitions/ALG10_group1_ALG10OOOALG10BOOORP11-847H18v2.fasta	ALG10B,RP11-847H18.2,ALG10,
../firstrun/newGeneCopies/IFITM5/IFITM5_partitions/IFITM5_group1.fasta	../firstrun/newGeneCopies/IFITM5/IFITM5_partitions/IFITM5_group1_IFITM5OOOIFITM2OOOPGGHG.fasta	IFITM2,PGGHG,IFITM5,RP11-326C3.4,
../firstrun/newGeneCopies/PSMB4/PSMB4_partitions/PSMB4_group1.fasta	../firstrun/newGeneCopies/PSMB4/PSMB4_partitions/PSMB4_group1_PSMB4OOOPOGZ.fasta	PSMB4,POGZ,
../firstrun/newGeneCopies/HECTD4/HECTD4_partitions/HECTD4_group1.fasta	../firstrun/newGeneCopies/HECTD4/HECTD4_partitions/HECTD4_group1_HECTD4OOOMIR6861OOORN7SKP71.fasta	RP3-521E19.2,HECTD4,MIR6861,RN7SKP71,
../firstrun/newGeneCopies/HECTD4/HECTD4_partitions/HECTD4_group3.fasta	../firstrun/newGeneCopies/HECTD4/HECTD4_partitions/HECTD4_group3_HECTD4.fasta	HECTD4,
../firstrun/newGeneCopies/HECTD4/HECTD4_partitions/HECTD4_group2.fasta	../firstrun/newGeneCopies/HECTD4/HECTD4_partitions/HECTD4_group2_HECTD4OOORP3-521E19v3.fasta	HECTD4,RP3-521E19.3,
../firstrun/newGeneCopies/PHKG1/PHKG1_partitions/PHKG1_group3.fasta	../firstrun/newGeneCopies/PHKG1/PHKG1_partitions/PHKG1_group3_PHKG1OOOSUMF2.fasta	SUMF2,PHKG1,
../firstrun/newGeneCopies/HYPK/HYPK_partitions/HYPK_group1.fasta	../firstrun/newGeneCopies/HYPK/HYPK_partitions/HYPK_group1_HYPKOOOMFAP1OOOMIR1282.fasta	SERF2,MFAP1,RP11-296A16.1,SERINC4,MIR1282,HYPK,
../firstrun/newGeneCopies/REEP1/REEP1_partitions/REEP1_group2.fasta	../firstrun/newGeneCopies/REEP1/REEP1_partitions/REEP1_group2_REEP1OOOMRPL35.fasta	REEP1,MRPL35,
../firstrun/newGeneCopies/REEP1/REEP1_partitions/REEP1_group3.fasta	../firstrun/newGeneCopies/REEP1/REEP1_partitions/REEP1_group3_REEP1.fasta	REEP1,
../firstrun/newGeneCopies/SFMBT1/SFMBT1_partitions/SFMBT1_group2.fasta	../firstrun/newGeneCopies/SFMBT1/SFMBT1_partitions/SFMBT1_group2_SFMBT1OOORP11-894J14v5.fasta	RP11-894J14.5,SFMBT1,
../firstrun/newGeneCopies/SFMBT1/SFMBT1_partitions/SFMBT1_group3.fasta	../firstrun/newGeneCopies/SFMBT1/SFMBT1_partitions/SFMBT1_group3_SFMBT1OOORP11-5O17v1OOORP11-894J14v5.fasta	RP11-894J14.5,RP11-5O17.1,SFMBT1,
../firstrun/newGeneCopies/SFMBT1/SFMBT1_partitions/SFMBT1_group1.fasta	../firstrun/newGeneCopies/SFMBT1/SFMBT1_partitions/SFMBT1_group1_SFMBT1.fasta	SFMBT1,
../firstrun/newGeneCopies/ZCCHC18/ZCCHC18_partitions/ZCCHC18_group1.fasta	../firstrun/newGeneCopies/ZCCHC18/ZCCHC18_partitions/ZCCHC18_group1_ZCCHC18OOORP5-1055C14v9OOOSLC25A53.fasta	RP5-1055C14.9,ZCCHC18,SLC25A53P1,TMSB15B-AS1,SLC25A53,TMSB15B,
../firstrun/newGeneCopies/DPYSL4/DPYSL4_partitions/DPYSL4_group1.fasta	../firstrun/newGeneCopies/DPYSL4/DPYSL4_partitions/DPYSL4_group1_DPYSL4OOOJAKMIP3OOORP11-140A10v3.fasta	DPYSL4,JAKMIP3,RP11-140A10.3,STK32C,
../firstrun/newGeneCopies/PODX/PODX_partitions/PODX_group1.fasta	../firstrun/newGeneCopies/PODX/PODX_partitions/PODX_group1_PODXL2OOOABTB1OOORP11-427I6v5.fasta	RP11-427I6.5,ABTB1,PODXL2,
../firstrun/newGeneCopies/DYDC1/DYDC1_partitions/DYDC1_group1.fasta	../firstrun/newGeneCopies/DYDC1/DYDC1_partitions/DYDC1_group1_DYDC1OOODYDC2OOORP11-36D19v8.fasta	DYDC2,RP11-36D19.8,DYDC1,
../firstrun/newGeneCopies/TCP11/TCP11_partitions/TCP11_group9.fasta	../firstrun/newGeneCopies/TCP11/TCP11_partitions/TCP11_group9_TCP11X1OOOTCP11X2OOOTCP11X3P.fasta	TCP11X2,RP11-353J17.5,TCP11X1,TCP11X3P,
../firstrun/newGeneCopies/TCP11/TCP11_partitions/TCP11_group1.fasta	../firstrun/newGeneCopies/TCP11/TCP11_partitions/TCP11_group1_TCP11.fasta	TCP11,
../firstrun/newGeneCopies/BICRA/BICRA_partitions/BICRA_group3.fasta	../firstrun/newGeneCopies/BICRA/BICRA_partitions/BICRA_group3_BICRAOOOBICRA-AS1OOOAC008985v1.fasta	AC008985.1,BICRA,CTD-3001H11.2,BICRA-AS1,CTD-2571L23.8,
../firstrun/newGeneCopies/IZUMO2/IZUMO2_partitions/IZUMO2_group1.fasta	../firstrun/newGeneCopies/IZUMO2/IZUMO2_partitions/IZUMO2_group1_IZUMO2.fasta	IZUMO2,
../firstrun/newGeneCopies/FBXO30/FBXO30_partitions/FBXO30_group1.fasta	../firstrun/newGeneCopies/FBXO30/FBXO30_partitions/FBXO30_group1_FBXO30OOOFBXO30-DTOOORP3-466P17v3.fasta	RP3-466P17.3,FBXO30,FBXO30-DT,
../firstrun/newGeneCopies/B3GALT6/B3GALT6_partitions/B3GALT6_group1.fasta	../firstrun/newGeneCopies/B3GALT6/B3GALT6_partitions/B3GALT6_group1_B3GALT6OOOSDF4.fasta	B3GALT6,SDF4,
../firstrun/newGeneCopies/UTP23/UTP23_partitions/UTP23_group1.fasta	../firstrun/newGeneCopies/UTP23/UTP23_partitions/UTP23_group1_UTP23OOOEIF3HOOORAD21.fasta	UTP23,RAD21,EIF3H,
../firstrun/newGeneCopies/ACTR1B/ACTR1B_partitions/ACTR1B_group1.fasta	../firstrun/newGeneCopies/ACTR1B/ACTR1B_partitions/ACTR1B_group1_ACTR1BOOOC2orf92OOORNU4-8P.fasta	C2orf92,RNU4-8P,ACTR1B,
../firstrun/newGeneCopies/IFITM1/IFITM1_partitions/IFITM1_group1.fasta	../firstrun/newGeneCopies/IFITM1/IFITM1_partitions/IFITM1_group1_IFITM1OOOIFITM2OOOIFITM3.fasta	RP11-326C3.7,IFITM3,RP11-326C3.17,IFITM1,RP11-326C3.11,IFITM2,
../firstrun/newGeneCopies/ABCB11/ABCB11_partitions/ABCB11_group1.fasta	../firstrun/newGeneCopies/ABCB11/ABCB11_partitions/ABCB11_group1_ABCB11OOOSPC25.fasta	SPC25,ABCB11,
../firstrun/newGeneCopies/IGHV3-64D/IGHV3-64D_partitions/IGHV3-64D_group7.fasta	../firstrun/newGeneCopies/IGHV3-64D/IGHV3-64D_partitions/IGHV3-64D_group7_IGHV3-64DOOOCH17-224D4v1.fasta	CH17-224D4.1,IGHV3-64D,
../firstrun/newGeneCopies/HIVEP2/HIVEP2_partitions/HIVEP2_group1.fasta	../firstrun/newGeneCopies/HIVEP2/HIVEP2_partitions/HIVEP2_group1_HIVEP2OOORP1-67K17v3OOORP1-67K17v4.fasta	RP1-67K17.3,HIVEP2,RP1-67K17.4,
../firstrun/newGeneCopies/HIVEP2/HIVEP2_partitions/HIVEP2_group3.fasta	../firstrun/newGeneCopies/HIVEP2/HIVEP2_partitions/HIVEP2_group3_HIVEP2OOORP11-439L18v1.fasta	HIVEP2,RP11-439L18.1,
../firstrun/newGeneCopies/HIVEP2/HIVEP2_partitions/HIVEP2_group2.fasta	../firstrun/newGeneCopies/HIVEP2/HIVEP2_partitions/HIVEP2_group2_HIVEP2.fasta	HIVEP2,
../firstrun/newGeneCopies/NEK4/NEK4_partitions/NEK4_group1.fasta	../firstrun/newGeneCopies/NEK4/NEK4_partitions/NEK4_group1_NEK4OOOGLT8D1OOORP5-966M1v4.fasta	RP5-966M1.7,SPCS1,RP5-966M1.4,RP5-966M1.5,NEK4,GLT8D1,
../firstrun/newGeneCopies/TUBGCP6/TUBGCP6_partitions/TUBGCP6_group1.fasta	../firstrun/newGeneCopies/TUBGCP6/TUBGCP6_partitions/TUBGCP6_group1_TUBGCP6OOOHDAC10OOOMAPK12.fasta	TUBGCP6,HDAC10,SELENOO,MAPK12,
../firstrun/newGeneCopies/ZNF839/ZNF839_partitions/ZNF839_group1.fasta	../firstrun/newGeneCopies/ZNF839/ZNF839_partitions/ZNF839_group1_ZNF839OOOCINP.fasta	ZNF839,CINP,
../firstrun/newGeneCopies/LCE2/LCE2_partitions/LCE2_group1.fasta	../firstrun/newGeneCopies/LCE2/LCE2_partitions/LCE2_group1_LCE2AOOOLCE2BOOOLCE2C.fasta	LCE2B,LCE2C,LCE2A,LCE2D,
../firstrun/newGeneCopies/SLC29A2/SLC29A2_partitions/SLC29A2_group1.fasta	../firstrun/newGeneCopies/SLC29A2/SLC29A2_partitions/SLC29A2_group1_SLC29A2OOOMetazoa_SRPOOORP11-867G23v8.fasta	RP11-867G23.8,SLC29A2,Metazoa_SRP,
../firstrun/newGeneCopies/MEFV/MEFV_partitions/MEFV_group1.fasta	../firstrun/newGeneCopies/MEFV/MEFV_partitions/MEFV_group1_MEFVOOOLINC00921OOOZNF263.fasta	MEFV,ZNF263,LINC00921,
../firstrun/newGeneCopies/NSUN5/NSUN5_partitions/NSUN5_group1.fasta	../firstrun/newGeneCopies/NSUN5/NSUN5_partitions/NSUN5_group1_NSUN5OOONSUN5P1OOONSUN5P2.fasta	POM121,POM121B,TRIM50,TRIM73,NSUN5P1,NSUN5,NSUN5P2,POM121C,CH17-264B6.5,
../firstrun/newGeneCopies/THY1/THY1_partitions/THY1_group1.fasta	../firstrun/newGeneCopies/THY1/THY1_partitions/THY1_group1_THY1OOOTHY1-AS1OOOUSP2-AS1.fasta	THY1,USP2-AS1,THY1-AS1,
../firstrun/newGeneCopies/DPP7/DPP7_partitions/DPP7_group1.fasta	../firstrun/newGeneCopies/DPP7/DPP7_partitions/DPP7_group1_DPP7OOOMAN1B1.fasta	DPP7,MAN1B1,
../firstrun/newGeneCopies/NPHP1/NPHP1_partitions/NPHP1_group1.fasta	../firstrun/newGeneCopies/NPHP1/NPHP1_partitions/NPHP1_group1_NPHP1OOOACTR1AP1.fasta	NPHP1,ACTR1AP1,
../firstrun/newGeneCopies/NPAP/NPAP_partitions/NPAP_group33.fasta	../firstrun/newGeneCopies/NPAP/NPAP_partitions/NPAP_group33_NPAP1OOOPWRN1OOORP11-125E1v2.fasta	PWRN1,RP11-125E1.2,NPAP1,
../firstrun/newGeneCopies/KRT18/KRT18_partitions/KRT18_group45.fasta	../firstrun/newGeneCopies/KRT18/KRT18_partitions/KRT18_group45_KRT18OOOKRT8.fasta	KRT18,KRT8,
../firstrun/newGeneCopies/EEFSEC/EEFSEC_partitions/EEFSEC_group1.fasta	../firstrun/newGeneCopies/EEFSEC/EEFSEC_partitions/EEFSEC_group1_EEFSECOOOAL449214v1OOORUVBL1.fasta	RUVBL1,AL449214.1,EEFSEC,
../firstrun/newGeneCopies/EEFSEC/EEFSEC_partitions/EEFSEC_group3.fasta	../firstrun/newGeneCopies/EEFSEC/EEFSEC_partitions/EEFSEC_group3_EEFSEC.fasta	EEFSEC,
../firstrun/newGeneCopies/LTV1/LTV1_partitions/LTV1_group2.fasta	../firstrun/newGeneCopies/LTV1/LTV1_partitions/LTV1_group2_LTV1OOORP3-468K18v5OOORP3-468K18v6.fasta	ZC2HC1B,RP3-468K18.7,RP3-468K18.5,RP3-468K18.6,LTV1,
../firstrun/newGeneCopies/LY6L/LY6L_partitions/LY6L_group1.fasta	../firstrun/newGeneCopies/LY6L/LY6L_partitions/LY6L_group1_LY6L.fasta	LY6L,
../firstrun/newGeneCopies/MXRA/MXRA_partitions/MXRA_group5.fasta	../firstrun/newGeneCopies/MXRA/MXRA_partitions/MXRA_group5_MXRA5OOOMXRA5Y.fasta	MXRA5Y,MXRA5,
../firstrun/newGeneCopies/TOP3/TOP3_partitions/TOP3_group3.fasta	../firstrun/newGeneCopies/TOP3/TOP3_partitions/TOP3_group3_TOP3BOOOTOP3BP1OOOIGLVIV-53.fasta	TOP3B,LL22NC03-123E1.5,TOP3BP1,IGLVIV-53,PPM1F-AS1,
../firstrun/newGeneCopies/TOP3/TOP3_partitions/TOP3_group2.fasta	../firstrun/newGeneCopies/TOP3/TOP3_partitions/TOP3_group2_TOP3AOOORP1-178F10v1OOORPL21P121.fasta	RPL7AP65,SMCR8,RPL21P121,RP1-178F10.1,TOP3A,
../firstrun/newGeneCopies/GLT8D1/GLT8D1_partitions/GLT8D1_group1.fasta	../firstrun/newGeneCopies/GLT8D1/GLT8D1_partitions/GLT8D1_group1_GLT8D1OOOGNL3OOONEK4.fasta	SNORD69,GNL3,GLT8D1,SPCS1,NEK4,
../firstrun/newGeneCopies/MRPL11/MRPL11_partitions/MRPL11_group2.fasta	../firstrun/newGeneCopies/MRPL11/MRPL11_partitions/MRPL11_group2_MRPL11OOOCTD-3074O7v7OOOENSG10010136491v1.fasta	PELI3,CTD-3074O7.7,MRPL11,ENSG10010136491.1,
../firstrun/newGeneCopies/CLDN5/CLDN5_partitions/CLDN5_group1.fasta	../firstrun/newGeneCopies/CLDN5/CLDN5_partitions/CLDN5_group1_CLDN5OOOAC000082v4OOOCDC45.fasta	CLDN5,AC000082.4,CDC45,
../firstrun/newGeneCopies/PPP1CA/PPP1CA_partitions/PPP1CA_group1.fasta	../firstrun/newGeneCopies/PPP1CA/PPP1CA_partitions/PPP1CA_group1_PPP1CAOOOCARNS1OOORAD9A.fasta	TBC1D10C,RNU6-1238P,RAD9A,CARNS1,PPP1CA,
../firstrun/newGeneCopies/RANBP10/RANBP10_partitions/RANBP10_group1.fasta	../firstrun/newGeneCopies/RANBP10/RANBP10_partitions/RANBP10_group1_RANBP10OOORP11-167P11v2OOOTSNAXIP1.fasta	RANBP10,TSNAXIP1,RP11-167P11.2,
../firstrun/newGeneCopies/BRAP/BRAP_partitions/BRAP_group1.fasta	../firstrun/newGeneCopies/BRAP/BRAP_partitions/BRAP_group1_BRAPOOOACAD10OOOPCNPP1.fasta	BRAP,PCNPP1,ACAD10,
../firstrun/newGeneCopies/ASB12/ASB12_partitions/ASB12_group1.fasta	../firstrun/newGeneCopies/ASB12/ASB12_partitions/ASB12_group1_ASB12OOORP11-284B18v6.fasta	RP11-284B18.6,ASB12,
../firstrun/newGeneCopies/ZNF761/ZNF761_partitions/ZNF761_group14.fasta	../firstrun/newGeneCopies/ZNF761/ZNF761_partitions/ZNF761_group14_ZNF761OOOCTD-2224J9v11OOOCTD-2224J9v4.fasta	ZNF765,RPL39P36,TPM3P6,TPM3P9,CTD-2224J9.4,ZNF813,CTD-2224J9.11,ZNF761,ZNF525,
../firstrun/newGeneCopies/CTH/CTH_partitions/CTH_group1.fasta	../firstrun/newGeneCopies/CTH/CTH_partitions/CTH_group1_CTHOOOMetazoa_SRP.fasta	CTH,Metazoa_SRP,
../firstrun/newGeneCopies/RASL11A/RASL11A_partitions/RASL11A_group1.fasta	../firstrun/newGeneCopies/RASL11A/RASL11A_partitions/RASL11A_group1_RASL11A.fasta	RASL11A,
../firstrun/newGeneCopies/NLGN1/NLGN1_partitions/NLGN1_group4.fasta	../firstrun/newGeneCopies/NLGN1/NLGN1_partitions/NLGN1_group4_NLGN1OOONLGN1-AS1.fasta	NLGN1-AS1,NLGN1,
../firstrun/newGeneCopies/NLGN1/NLGN1_partitions/NLGN1_group6.fasta	../firstrun/newGeneCopies/NLGN1/NLGN1_partitions/NLGN1_group6_NLGN1.fasta	NLGN1,
../firstrun/newGeneCopies/NLGN1/NLGN1_partitions/NLGN1_group1.fasta	../firstrun/newGeneCopies/NLGN1/NLGN1_partitions/NLGN1_group1_NLGN1OOORP11-521A24v1.fasta	RP11-521A24.1,NLGN1,
../firstrun/newGeneCopies/OCLN/OCLN_partitions/OCLN_group3.fasta	../firstrun/newGeneCopies/OCLN/OCLN_partitions/OCLN_group3_OCLNOOOOCLNP1OOOENSG00000280514.fasta	U6,GTF2H2C,RP11-241G9.3,ENSG00000280514,OCLN,GTF2H2B,RNU6-724P,RP11-1305N21.1,GTF2H2C_2,RP11-1275J23.3,NAIP,GTF2H2,OCLNP1,
../firstrun/newGeneCopies/TCFL5/TCFL5_partitions/TCFL5_group1.fasta	../firstrun/newGeneCopies/TCFL5/TCFL5_partitions/TCFL5_group1_TCFL5OOOCOL9A3OOODPH3P1.fasta	DPH3P1,TCFL5,COL9A3,
../firstrun/newGeneCopies/TRPM4/TRPM4_partitions/TRPM4_group1.fasta	../firstrun/newGeneCopies/TRPM4/TRPM4_partitions/TRPM4_group1_TRPM4OOOHRC.fasta	TRPM4,HRC,
../firstrun/newGeneCopies/CH17-476P10.1/CH17-476P10.1_partitions/CH17-476P10.1_group1.fasta	../firstrun/newGeneCopies/CH17-476P10.1/CH17-476P10.1_partitions/CH17-476P10.1_group1_CH17-476P10v1OOOAP000351v3OOOAP000351v4.fasta	KB-1125A3.10,AP000351.3,GSTT2,GSTT2B,CH17-476P10.1,DDTL,DDT,KB-226F1.2,AP000351.4,
../firstrun/newGeneCopies/FRG2/FRG2_partitions/FRG2_group1.fasta	../firstrun/newGeneCopies/FRG2/FRG2_partitions/FRG2_group1_FRG2OOOFRG2BOOOFRG2C.fasta	FRG2C,FRG2,RARRES2P1,DUX4L9,FRG2EP,XX-2136C111.4,FRG2B,DUX4L26,LINC00960,RPL23AP49,DUX4L34,
../firstrun/newGeneCopies/IMPA1/IMPA1_partitions/IMPA1_group2.fasta	../firstrun/newGeneCopies/IMPA1/IMPA1_partitions/IMPA1_group2_IMPA1.fasta	IMPA1,
../firstrun/newGeneCopies/RP11-503P21.4/RP11-503P21.4_partitions/RP11-503P21.4_group10.fasta	../firstrun/newGeneCopies/RP11-503P21.4/RP11-503P21.4_partitions/RP11-503P21.4_group10_RP11-503P21v4OOOBAK1OOOBAK1P1.fasta	BAK1,C20orf203,BAK1P1,GGNBP1,COMMD7,RP11-503P21.4,
../firstrun/newGeneCopies/MAGED2/MAGED2_partitions/MAGED2_group1.fasta	../firstrun/newGeneCopies/MAGED2/MAGED2_partitions/MAGED2_group1_MAGED2OOOSNORA11.fasta	MAGED2,SNORA11,
../firstrun/newGeneCopies/CNRIP1/CNRIP1_partitions/CNRIP1_group2.fasta	../firstrun/newGeneCopies/CNRIP1/CNRIP1_partitions/CNRIP1_group2_CNRIP1.fasta	CNRIP1,
../firstrun/newGeneCopies/CNRIP1/CNRIP1_partitions/CNRIP1_group1.fasta	../firstrun/newGeneCopies/CNRIP1/CNRIP1_partitions/CNRIP1_group1_CNRIP1.fasta	CNRIP1,
../firstrun/newGeneCopies/C4orf48/C4orf48_partitions/C4orf48_group1.fasta	../firstrun/newGeneCopies/C4orf48/C4orf48_partitions/C4orf48_group1_C4orf48OOONELFA.fasta	NELFA,C4orf48,
../firstrun/newGeneCopies/OTUD/OTUD_partitions/OTUD_group2.fasta	../firstrun/newGeneCopies/OTUD/OTUD_partitions/OTUD_group2_OTUD7AOOODEPDC1OOODEPDC1P1.fasta	RP11-456J20.2,DEPDC1,DEPDC1P1,RP4-694A7.2,OTUD7A,
../firstrun/newGeneCopies/OTUD/OTUD_partitions/OTUD_group15.fasta	../firstrun/newGeneCopies/OTUD/OTUD_partitions/OTUD_group15_OTUD7A.fasta	OTUD7A,
../firstrun/newGeneCopies/OTUD/OTUD_partitions/OTUD_group3.fasta	../firstrun/newGeneCopies/OTUD/OTUD_partitions/OTUD_group3_OTUD7BOOOMTMR11.fasta	OTUD7B,MTMR11,
../firstrun/newGeneCopies/OTUD/OTUD_partitions/OTUD_group13.fasta	../firstrun/newGeneCopies/OTUD/OTUD_partitions/OTUD_group13_OTUD7AOOORP11-736I24v3OOORP11-736I24v4.fasta	RP11-736I24.4,RP5-1086D14.6,RP11-736I24.3,OTUD7A,
../firstrun/newGeneCopies/PRG3/PRG3_partitions/PRG3_group1.fasta	../firstrun/newGeneCopies/PRG3/PRG3_partitions/PRG3_group1_PRG3OOOP2RX3.fasta	P2RX3,PRG3,
../firstrun/newGeneCopies/ANAPC15/ANAPC15_partitions/ANAPC15_group2.fasta	../firstrun/newGeneCopies/ANAPC15/ANAPC15_partitions/ANAPC15_group2_ANAPC15OOOFOLR3OOOLAMTOR1.fasta	RP11-807H22.9,LAMTOR1,ANAPC15,RP11-807H22.10,FOLR3,
../firstrun/newGeneCopies/NECAP2/NECAP2_partitions/NECAP2_group1.fasta	../firstrun/newGeneCopies/NECAP2/NECAP2_partitions/NECAP2_group1_NECAP2OOOLINC01772.fasta	LINC01772,NECAP2,
../firstrun/newGeneCopies/CSH/CSH_partitions/CSH_group1.fasta	../firstrun/newGeneCopies/CSH/CSH_partitions/CSH_group1_CSH1OOOCSH2OOOCSHL1.fasta	CSH2,GH2,GH1,CTC-264K15.5,CSH1,CSHL1,RP11-630H24.4,
../firstrun/newGeneCopies/NPDC1/NPDC1_partitions/NPDC1_group1.fasta	../firstrun/newGeneCopies/NPDC1/NPDC1_partitions/NPDC1_group1_NPDC1OOOC9orf139OOOENTPD2.fasta	ENTPD2,NPDC1,RP11-229P13.27,C9orf139,
../firstrun/newGeneCopies/QKI/QKI_partitions/QKI_group3.fasta	../firstrun/newGeneCopies/QKI/QKI_partitions/QKI_group3_QKI.fasta	QKI,
../firstrun/newGeneCopies/QKI/QKI_partitions/QKI_group2.fasta	../firstrun/newGeneCopies/QKI/QKI_partitions/QKI_group2_QKIOOOCAHM.fasta	QKI,CAHM,
../firstrun/newGeneCopies/QKI/QKI_partitions/QKI_group4.fasta	../firstrun/newGeneCopies/QKI/QKI_partitions/QKI_group4_QKI.fasta	QKI,
../firstrun/newGeneCopies/SRMS/SRMS_partitions/SRMS_group1.fasta	../firstrun/newGeneCopies/SRMS/SRMS_partitions/SRMS_group1_SRMSOOOFNDC11OOOPTK6.fasta	SRMS,RP4-697K14.15,PTK6,FNDC11,
../firstrun/newGeneCopies/FOXD4L/FOXD4L_partitions/FOXD4L_group19.fasta	../firstrun/newGeneCopies/FOXD4L/FOXD4L_partitions/FOXD4L_group19_FOXD4L1OOOFOXD4L3OOOFOXD4L4.fasta	FOXD4L1,FRG1HP,FOXD4L6,LINC01388,CBWD3,FOXD4L4,CBWD1,FOXD4L5,FOXD4,RP11-143M1.3,CBWD5,CBWD2,CBWD6,CBWD4P,RP11-561O23.7,RP11-561O23.5,FOXD4L3,
../firstrun/newGeneCopies/SGCA/SGCA_partitions/SGCA_group1.fasta	../firstrun/newGeneCopies/SGCA/SGCA_partitions/SGCA_group1_SGCAOOOH1-9POOORP11-893F2v13.fasta	H1-9P,SGCA,RP11-893F2.13,RP11-893F2.14,
../firstrun/newGeneCopies/VWA1/VWA1_partitions/VWA1_group1.fasta	../firstrun/newGeneCopies/VWA1/VWA1_partitions/VWA1_group1_VWA1OOOATAD3BOOOATAD3C.fasta	RP5-832C2.8,ATAD3C,LINC01770,VWA1,ATAD3B,
../firstrun/newGeneCopies/PEX26/PEX26_partitions/PEX26_group2.fasta	../firstrun/newGeneCopies/PEX26/PEX26_partitions/PEX26_group2_PEX26OOOAC008079v12OOOARL2BPP10.fasta	AC008079.12,ARL2BPP10,XXbac-B476C20.10,PEX26,XXbac-B476C20.9,XXbac-B476C20.11,
../firstrun/newGeneCopies/CT47A/CT47A_partitions/CT47A_group1.fasta	../firstrun/newGeneCopies/CT47A/CT47A_partitions/CT47A_group1_CT47A1OOOCT47A10OOOCT47A11.fasta	CT47A8,CT47A7,RP6-166C19.14,RP6-166C19.15,CT47A10,CT47A9,CT47A6,RP6-166C19.20,CT47A11,RP6-166C19.16,PA2G4P1,CT47B1,RP6-166C19.12,RP1-321E8.5,RP6-166C19.13,RP6-166C19.18,RP6-166C19.22,RP6-166C19.17,RP6-166C19.21,RP6-166C19.19,RP1-321E8.4,CT47A3,CT47A1,CT47A12,CT47A2,RP6-166C19.23,CT47A5,CT47A4,
../firstrun/newGeneCopies/GP9/GP9_partitions/GP9_group1.fasta	../firstrun/newGeneCopies/GP9/GP9_partitions/GP9_group1_GP9.fasta	GP9,
../firstrun/newGeneCopies/TNFRSF4/TNFRSF4_partitions/TNFRSF4_group1.fasta	../firstrun/newGeneCopies/TNFRSF4/TNFRSF4_partitions/TNFRSF4_group1_TNFRSF4OOOSDF4OOOTNFRSF18.fasta	TNFRSF18,TNFRSF4,SDF4,
../firstrun/newGeneCopies/GALE/GALE_partitions/GALE_group1.fasta	../firstrun/newGeneCopies/GALE/GALE_partitions/GALE_group1_GALEOOOHMGCLOOOLYPLA2.fasta	HMGCL,GALE,LYPLA2,
../firstrun/newGeneCopies/PTCHD1/PTCHD1_partitions/PTCHD1_group3.fasta	../firstrun/newGeneCopies/PTCHD1/PTCHD1_partitions/PTCHD1_group3_PTCHD1OOOHIKESHIP1.fasta	HIKESHIP1,PTCHD1,
../firstrun/newGeneCopies/PTCHD1/PTCHD1_partitions/PTCHD1_group4.fasta	../firstrun/newGeneCopies/PTCHD1/PTCHD1_partitions/PTCHD1_group4_PTCHD1.fasta	PTCHD1,
../firstrun/newGeneCopies/DUSP9/DUSP9_partitions/DUSP9_group1.fasta	../firstrun/newGeneCopies/DUSP9/DUSP9_partitions/DUSP9_group1_DUSP9.fasta	DUSP9,
../firstrun/newGeneCopies/ACAP3/ACAP3_partitions/ACAP3_group1.fasta	../firstrun/newGeneCopies/ACAP3/ACAP3_partitions/ACAP3_group1_ACAP3OOOINTS11OOOMIR6726.fasta	MIR6726,MIR6727,INTS11,PUSL1,ACAP3,SCNN1D,
../firstrun/newGeneCopies/VSTM1/VSTM1_partitions/VSTM1_group1.fasta	../firstrun/newGeneCopies/VSTM1/VSTM1_partitions/VSTM1_group1_VSTM1.fasta	VSTM1,
../firstrun/newGeneCopies/HLA-K/HLA-K_partitions/HLA-K_group2.fasta	../firstrun/newGeneCopies/HLA-K/HLA-K_partitions/HLA-K_group2_HLA-KOOOHCG4BOOOHCG4P5.fasta	HLA-U,HCG4B,HCG4P5,HLA-K,HLA-A,
../firstrun/newGeneCopies/TSNAXIP1/TSNAXIP1_partitions/TSNAXIP1_group1.fasta	../firstrun/newGeneCopies/TSNAXIP1/TSNAXIP1_partitions/TSNAXIP1_group1_TSNAXIP1OOOCENPTOOORANBP10.fasta	TSNAXIP1,CENPT,RANBP10,
../firstrun/newGeneCopies/DPF2/DPF2_partitions/DPF2_group2.fasta	../firstrun/newGeneCopies/DPF2/DPF2_partitions/DPF2_group2_DPF2OOOTIGD3.fasta	DPF2,TIGD3,
../firstrun/newGeneCopies/LIPN/LIPN_partitions/LIPN_group1.fasta	../firstrun/newGeneCopies/LIPN/LIPN_partitions/LIPN_group1_LIPN.fasta	LIPN,
../firstrun/newGeneCopies/CENPVL/CENPVL_partitions/CENPVL_group1.fasta	../firstrun/newGeneCopies/CENPVL/CENPVL_partitions/CENPVL_group1_CENPVL1OOOCENPVL2OOOCENPVL3.fasta	CENPVL2,CENPVL1,CENPVL3,
../firstrun/newGeneCopies/PCBP/PCBP_partitions/PCBP_group11.fasta	../firstrun/newGeneCopies/PCBP/PCBP_partitions/PCBP_group11_PCBP3.fasta	PCBP3,
../firstrun/newGeneCopies/PCBP/PCBP_partitions/PCBP_group13.fasta	../firstrun/newGeneCopies/PCBP/PCBP_partitions/PCBP_group13_PCBP3.fasta	PCBP3,
../firstrun/newGeneCopies/PCBP/PCBP_partitions/PCBP_group12.fasta	../firstrun/newGeneCopies/PCBP/PCBP_partitions/PCBP_group12_PCBP3.fasta	PCBP3,
../firstrun/newGeneCopies/PCBP/PCBP_partitions/PCBP_group1.fasta	../firstrun/newGeneCopies/PCBP/PCBP_partitions/PCBP_group1_PCBP1OOOPCBP1-AS1OOOAC016700v2.fasta	RN7SL470P,AC016700.2,MRPL36P1,PCBP1,ASPRV1,PCBP1-AS1,
../firstrun/newGeneCopies/PCBP/PCBP_partitions/PCBP_group14.fasta	../firstrun/newGeneCopies/PCBP/PCBP_partitions/PCBP_group14_PCBP3OOOPCBP3-AS1OOOPCBP3-OT1.fasta	AJ011931.2,PCBP3-OT1,PCBP3,PCBP3-AS1,AJ011931.1,
../firstrun/newGeneCopies/ATP5MC1/ATP5MC1_partitions/ATP5MC1_group9.fasta	../firstrun/newGeneCopies/ATP5MC1/ATP5MC1_partitions/ATP5MC1_group9_ATP5MC1OOORP11-501C14v9OOOSUMO2P17.fasta	SUMO2P17,ATP5MC1,RP11-501C14.9,
../firstrun/newGeneCopies/BSPH1/BSPH1_partitions/BSPH1_group1.fasta	../firstrun/newGeneCopies/BSPH1/BSPH1_partitions/BSPH1_group1_BSPH1OOOELSPBP1.fasta	BSPH1,ELSPBP1,
../firstrun/newGeneCopies/RNASEH2C/RNASEH2C_partitions/RNASEH2C_group1.fasta	../firstrun/newGeneCopies/RNASEH2C/RNASEH2C_partitions/RNASEH2C_group1_RNASEH2COOOKAT5.fasta	RNASEH2C,KAT5,
../firstrun/newGeneCopies/STK11/STK11_partitions/STK11_group2.fasta	../firstrun/newGeneCopies/STK11/STK11_partitions/STK11_group2_STK11OOOCBARPOOOHMGB2P1.fasta	HMGB2P1,STK11,CBARP,
../firstrun/newGeneCopies/TBC1D10/TBC1D10_partitions/TBC1D10_group2.fasta	../firstrun/newGeneCopies/TBC1D10/TBC1D10_partitions/TBC1D10_group2_TBC1D10BOOOCD2BP2OOOCD2BP2-DT.fasta	CD2BP2,TBC1D10B,RP11-347C12.11,MYLPF,CD2BP2-DT,
../firstrun/newGeneCopies/TBC1D10/TBC1D10_partitions/TBC1D10_group1.fasta	../firstrun/newGeneCopies/TBC1D10/TBC1D10_partitions/TBC1D10_group1_TBC1D10COOOPPP1CA.fasta	PPP1CA,TBC1D10C,
../firstrun/newGeneCopies/MT1F/MT1F_partitions/MT1F_group1.fasta	../firstrun/newGeneCopies/MT1F/MT1F_partitions/MT1F_group1_MT1FOOOMT1BOOORP11-249C24v11.fasta	MT1F,RP11-249C24.11,MT1B,
../firstrun/newGeneCopies/RRP7A/RRP7A_partitions/RRP7A_group1.fasta	../firstrun/newGeneCopies/RRP7A/RRP7A_partitions/RRP7A_group1_RRP7AOOORNU6-513POOORRP7BP.fasta	SERHL,RNU6-513P,RRP7A,RRP7BP,SERHL2,
../firstrun/newGeneCopies/EPPIN/EPPIN_partitions/EPPIN_group1.fasta	../firstrun/newGeneCopies/EPPIN/EPPIN_partitions/EPPIN_group1_EPPINOOOEPPIN-WFDC6OOOHSPD1P21.fasta	EPPIN,EPPIN-WFDC6,RP3-461P17.6,HSPD1P21,WFDC6,
../firstrun/newGeneCopies/MMGT1/MMGT1_partitions/MMGT1_group1.fasta	../firstrun/newGeneCopies/MMGT1/MMGT1_partitions/MMGT1_group1_MMGT1OOOSLC9A6.fasta	MMGT1,SLC9A6,
../firstrun/newGeneCopies/TAS2R13/TAS2R13_partitions/TAS2R13_group1.fasta	../firstrun/newGeneCopies/TAS2R13/TAS2R13_partitions/TAS2R13_group1_TAS2R13OOOPRH1OOOPRH1-PRR4.fasta	PRR4,PRH1-PRR4,PRH1,TAS2R13,
../firstrun/newGeneCopies/CNR2/CNR2_partitions/CNR2_group1.fasta	../firstrun/newGeneCopies/CNR2/CNR2_partitions/CNR2_group1_CNR2OOOBTBD6P1OOOFUCA1.fasta	FUCA1,RP11-4M23.3,BTBD6P1,CNR2,
../firstrun/newGeneCopies/HAUS4/HAUS4_partitions/HAUS4_group2.fasta	../firstrun/newGeneCopies/HAUS4/HAUS4_partitions/HAUS4_group2_HAUS4OOOMIR4707OOORP11-298I3v1.fasta	RP11-298I3.1,RP11-298I3.5,MIR4707,HAUS4,
../firstrun/newGeneCopies/IGLL5/IGLL5_partitions/IGLL5_group1.fasta	../firstrun/newGeneCopies/IGLL5/IGLL5_partitions/IGLL5_group1_IGLL5OOOIGLC1OOOIGLC2.fasta	IGLJ2,IGLJ1,MIR5571,IGLC3,IGLC1,IGLC2,IGLL5,IGLJ3,
../firstrun/newGeneCopies/CASS4/CASS4_partitions/CASS4_group1.fasta	../firstrun/newGeneCopies/CASS4/CASS4_partitions/CASS4_group1_CASS4OOORPL39P.fasta	RPL39P,CASS4,
../firstrun/newGeneCopies/MYO9B/MYO9B_partitions/MYO9B_group1.fasta	../firstrun/newGeneCopies/MYO9B/MYO9B_partitions/MYO9B_group1_MYO9BOOOCTD-2528A14v5OOOCTD-3032J10v2.fasta	HAUS8,USE1,CTD-3032J10.2,CTD-3032J10.3,CTD-2528A14.5,CTD-3032J10.4,MYO9B,
../firstrun/newGeneCopies/SGMS1/SGMS1_partitions/SGMS1_group3.fasta	../firstrun/newGeneCopies/SGMS1/SGMS1_partitions/SGMS1_group3_SGMS1.fasta	SGMS1,
../firstrun/newGeneCopies/SGMS1/SGMS1_partitions/SGMS1_group2.fasta	../firstrun/newGeneCopies/SGMS1/SGMS1_partitions/SGMS1_group2_SGMS1OOORP11-521C22v2OOORP11-521C22v4.fasta	RP11-521C22.4,RP11-521C22.2,SGMS1,
../firstrun/newGeneCopies/SGMS1/SGMS1_partitions/SGMS1_group4.fasta	../firstrun/newGeneCopies/SGMS1/SGMS1_partitions/SGMS1_group4_SGMS1OOOSGMS1-AS1OOORNU7-107P.fasta	RP11-512N4.2,SGMS1-AS1,RNU7-107P,SHQ1P1,SGMS1,
../firstrun/newGeneCopies/CTD-2587H24.4/CTD-2587H24.4_partitions/CTD-2587H24.4_group3.fasta	../firstrun/newGeneCopies/CTD-2587H24.4/CTD-2587H24.4_partitions/CTD-2587H24.4_group3_CTD-2587H24v4OOODNAAF3OOODNAAF3-AS1.fasta	TNNI3,DNAAF3,CTD-2587H24.4,DNAAF3-AS1,
../firstrun/newGeneCopies/CXCR3/CXCR3_partitions/CXCR3_group1.fasta	../firstrun/newGeneCopies/CXCR3/CXCR3_partitions/CXCR3_group1_CXCR3OOOGCNA.fasta	GCNA,CXCR3,
../firstrun/newGeneCopies/ANKRD35/ANKRD35_partitions/ANKRD35_group1.fasta	../firstrun/newGeneCopies/ANKRD35/ANKRD35_partitions/ANKRD35_group1_ANKRD35.fasta	ANKRD35,
../firstrun/newGeneCopies/EMB/EMB_partitions/EMB_group1.fasta	../firstrun/newGeneCopies/EMB/EMB_partitions/EMB_group1_EMBOOOEMBP1OOOLINC01691.fasta	RP11-344P13.6,EMBP1,LINC01691,EMB,
../firstrun/newGeneCopies/NFAT5/NFAT5_partitions/NFAT5_group3.fasta	../firstrun/newGeneCopies/NFAT5/NFAT5_partitions/NFAT5_group3_NFAT5OOONQO1OOORP11-311C24v1.fasta	NFAT5,RP11-311C24.1,NQO1,
../firstrun/newGeneCopies/NFAT5/NFAT5_partitions/NFAT5_group1.fasta	../firstrun/newGeneCopies/NFAT5/NFAT5_partitions/NFAT5_group1_NFAT5OOOMIR1538.fasta	NFAT5,MIR1538,
../firstrun/newGeneCopies/UVSSA/UVSSA_partitions/UVSSA_group1.fasta	../firstrun/newGeneCopies/UVSSA/UVSSA_partitions/UVSSA_group1_UVSSAOOOAC078852v1OOOAC078852v2.fasta	UVSSA,AC078852.2,AC078852.1,
../firstrun/newGeneCopies/DNAH6/DNAH6_partitions/DNAH6_group1.fasta	../firstrun/newGeneCopies/DNAH6/DNAH6_partitions/DNAH6_group1_DNAH6OOODUXAP1OOOLDHAP7.fasta	LDHAP7,TRABD2A,DUXAP1,DNAH6,
../firstrun/newGeneCopies/SYT10/SYT10_partitions/SYT10_group1.fasta	../firstrun/newGeneCopies/SYT10/SYT10_partitions/SYT10_group1_SYT10.fasta	SYT10,
../firstrun/newGeneCopies/SYT10/SYT10_partitions/SYT10_group2.fasta	../firstrun/newGeneCopies/SYT10/SYT10_partitions/SYT10_group2_SYT10OOORP11-438D14v2OOORP11-438D14v3.fasta	RP11-438D14.2,RP11-438D14.3,SYT10,
../firstrun/newGeneCopies/FNDC/FNDC_partitions/FNDC_group3.fasta	../firstrun/newGeneCopies/FNDC/FNDC_partitions/FNDC_group3_FNDC7OOORP11-293A10v3.fasta	RP11-293A10.3,FNDC7,
../firstrun/newGeneCopies/FNDC/FNDC_partitions/FNDC_group1.fasta	../firstrun/newGeneCopies/FNDC/FNDC_partitions/FNDC_group1_FNDC10OOORP11-345P4v12.fasta	FNDC10,RP11-345P4.12,
../firstrun/newGeneCopies/FNDC/FNDC_partitions/FNDC_group20.fasta	../firstrun/newGeneCopies/FNDC/FNDC_partitions/FNDC_group20_FNDC8OOONLE1OOORAD51D.fasta	RP5-837J1.3,RAD51D,FNDC8,NLE1,
../firstrun/newGeneCopies/MFAP/MFAP_partitions/MFAP_group16.fasta	../firstrun/newGeneCopies/MFAP/MFAP_partitions/MFAP_group16_MFAP4OOOB9D1OOOMAPK7.fasta	MAPK7,B9D1,MFAP4,
../firstrun/newGeneCopies/ME2/ME2_partitions/ME2_group2.fasta	../firstrun/newGeneCopies/ME2/ME2_partitions/ME2_group2_ME2.fasta	ME2,
../firstrun/newGeneCopies/C22orf39/C22orf39_partitions/C22orf39_group1.fasta	../firstrun/newGeneCopies/C22orf39/C22orf39_partitions/C22orf39_group1_C22orf39OOOAC000068v5OOOHIRA.fasta	AC000068.5,RN7SL168P,UFD1,MRPL40,C22orf39,HIRA,
../firstrun/newGeneCopies/SPDYE13/SPDYE13_partitions/SPDYE13_group2.fasta	../firstrun/newGeneCopies/SPDYE13/SPDYE13_partitions/SPDYE13_group2_SPDYE13OOOSPDYE13POOOAC004951v6.fasta	RP5-1022I14.2,AC004980.9,SPDYE12P,SPDYE14,PMS2P8,SPDYE11,SPDYE17,PMS2P2,RP11-467H10.2,RP11-577H5.5,SPDYE8,PMS2P4,RP11-514P8.10,PMS2P10,SPDYE16,PMS2P7,SPDYE9,SPDYE2,SPDYE21,SPDYE3,SPDYE15,SPDYE2B,POLR2J3,SPDYE13,PMS2P1,DTX2P1-UPK3BP1-PMS2P11,SPDYE1,PMS2P6,CH17-264B6.6,SPDYE18,SPDYE13P,SPDYE10P,CH17-264B6.3,SPDYE15P,POLR2J4,SPDYE14P,AC004951.6,RP5-1165K10.2,SPDYE7P,SPDYE5,RP11-514P8.7,SPDYE6,CH17-264B6.1,
../firstrun/newGeneCopies/FASTKD1/FASTKD1_partitions/FASTKD1_group1.fasta	../firstrun/newGeneCopies/FASTKD1/FASTKD1_partitions/FASTKD1_group1_FASTKD1OOOKLHL41OOORP11-724O16v1.fasta	FASTKD1,KLHL41,RP11-724O16.1,
../firstrun/newGeneCopies/CTD-3074O7.11/CTD-3074O7.11_partitions/CTD-3074O7.11_group1.fasta	../firstrun/newGeneCopies/CTD-3074O7.11/CTD-3074O7.11_partitions/CTD-3074O7.11_group1_CTD-3074O7v11OOOBBS1OOOCTD-3074O7v13.fasta	DPP3,ZDHHC24,CTD-3074O7.13,CTD-3074O7.11,BBS1,
../firstrun/newGeneCopies/SMIM29/SMIM29_partitions/SMIM29_group1.fasta	../firstrun/newGeneCopies/SMIM29/SMIM29_partitions/SMIM29_group1_SMIM29OOOHMGA1OOOMIR6835.fasta	RP11-513I15.6,SMIM29,HMGA1,MIR6835,
../firstrun/newGeneCopies/ZDHHC24/ZDHHC24_partitions/ZDHHC24_group1.fasta	../firstrun/newGeneCopies/ZDHHC24/ZDHHC24_partitions/ZDHHC24_group1_ZDHHC24OOOACTN3OOOBBS1.fasta	ZDHHC24,ACTN3,CTD-3074O7.11,CTD-3074O7.13,BBS1,
../firstrun/newGeneCopies/KCNIP3/KCNIP3_partitions/KCNIP3_group1.fasta	../firstrun/newGeneCopies/KCNIP3/KCNIP3_partitions/KCNIP3_group1_KCNIP3OOOFABP7P2.fasta	FABP7P2,KCNIP3,
../firstrun/newGeneCopies/SUZ12/SUZ12_partitions/SUZ12_group2.fasta	../firstrun/newGeneCopies/SUZ12/SUZ12_partitions/SUZ12_group2_SUZ12OOOSUZ12P1OOOADGRL1.fasta	RN7SL316P,SUZ12P1,CTD-2349P21.3,CTD-2349P21.5,CTD-2349P21.10,RP11-640N20.6,CTD-2349P21.9,RP11-640N20.1,CTD-2349P21.6,ADGRL1,RNA5SP437,RP11-640N20.8,SUZ12,CTD-2349P21.7,CRLF3,
../firstrun/newGeneCopies/POMZP3/POMZP3_partitions/POMZP3_group1.fasta	../firstrun/newGeneCopies/POMZP3/POMZP3_partitions/POMZP3_group1_POMZP3OOOAC004980v7OOODTX2.fasta	DTX2,AC004980.7,POM121C,POM121,POMZP3,ZP3,RP11-313P13.5,
../firstrun/newGeneCopies/PCED/PCED_partitions/PCED_group4.fasta	../firstrun/newGeneCopies/PCED/PCED_partitions/PCED_group4_PCED1AOOOVPS16.fasta	VPS16,PCED1A,
../firstrun/newGeneCopies/CTB-102L5.4/CTB-102L5.4_partitions/CTB-102L5.4_group1.fasta	../firstrun/newGeneCopies/CTB-102L5.4/CTB-102L5.4_partitions/CTB-102L5.4_group1_CTB-102L5v4OOOC19orf33OOOCTB-102L5v9.fasta	CTB-102L5.9,Y_RNA,YIF1B,C19orf33,CTB-102L5.4,SPINT2,
../firstrun/newGeneCopies/TEAD4/TEAD4_partitions/TEAD4_group2.fasta	../firstrun/newGeneCopies/TEAD4/TEAD4_partitions/TEAD4_group2_TEAD4.fasta	TEAD4,
../firstrun/newGeneCopies/TEAD4/TEAD4_partitions/TEAD4_group3.fasta	../firstrun/newGeneCopies/TEAD4/TEAD4_partitions/TEAD4_group3_TEAD4OOORP11-253E3v3.fasta	RP11-253E3.3,TEAD4,
../firstrun/newGeneCopies/TEAD4/TEAD4_partitions/TEAD4_group1.fasta	../firstrun/newGeneCopies/TEAD4/TEAD4_partitions/TEAD4_group1_TEAD4OOORNU6-1315P.fasta	RNU6-1315P,TEAD4,
../firstrun/newGeneCopies/KAT14/KAT14_partitions/KAT14_group1.fasta	../firstrun/newGeneCopies/KAT14/KAT14_partitions/KAT14_group1_KAT14OOOPET117.fasta	KAT14,PET117,
../firstrun/newGeneCopies/SBK3/SBK3_partitions/SBK3_group1.fasta	../firstrun/newGeneCopies/SBK3/SBK3_partitions/SBK3_group1_SBK3OOOSBK2.fasta	SBK2,SBK3,
../firstrun/newGeneCopies/FCGR3/FCGR3_partitions/FCGR3_group1.fasta	../firstrun/newGeneCopies/FCGR3/FCGR3_partitions/FCGR3_group1_FCGR3AOOOFCGR3BOOORP11-25K21v6.fasta	RP11-25K21.6,FCGR3A,FCGR3B,
../firstrun/newGeneCopies/METTL9/METTL9_partitions/METTL9_group2.fasta	../firstrun/newGeneCopies/METTL9/METTL9_partitions/METTL9_group2_METTL9OOOCTB-31N19v3OOOIGSF6.fasta	RNU6-1005P,METTL9,IGSF6,CTB-31N19.3,RNU6-196P,
../firstrun/newGeneCopies/RPTN/RPTN_partitions/RPTN_group1.fasta	../firstrun/newGeneCopies/RPTN/RPTN_partitions/RPTN_group1_RPTNOOOPUDPP2.fasta	PUDPP2,RPTN,
../firstrun/newGeneCopies/TMEM265/TMEM265_partitions/TMEM265_group1.fasta	../firstrun/newGeneCopies/TMEM265/TMEM265_partitions/TMEM265_group1_TMEM265OOOPHKG2OOORP11-2C24v4.fasta	RP11-2C24.9,SRCAP,PHKG2,RP11-2C24.4,TMEM265,
../firstrun/newGeneCopies/ARSD/ARSD_partitions/ARSD_group1.fasta	../firstrun/newGeneCopies/ARSD/ARSD_partitions/ARSD_group1_ARSDOOOARSD-AS1OOOARSDP1.fasta	ARSL,ARSD,ARSDP1,ARSD-AS1,GYG2P1,
../firstrun/newGeneCopies/MRPL35/MRPL35_partitions/MRPL35_group1.fasta	../firstrun/newGeneCopies/MRPL35/MRPL35_partitions/MRPL35_group1_MRPL35OOOREEP1.fasta	REEP1,MRPL35,
../firstrun/newGeneCopies/CHKA/CHKA_partitions/CHKA_group1.fasta	../firstrun/newGeneCopies/CHKA/CHKA_partitions/CHKA_group1_CHKAOOOCTD-2655K5v1OOORP11-802E16v3.fasta	TCIRG1,RP11-802E16.3,CHKA,CTD-2655K5.1,
../firstrun/newGeneCopies/CCR6/CCR6_partitions/CCR6_group1.fasta	../firstrun/newGeneCopies/CCR6/CCR6_partitions/CCR6_group1_CCR6OOORP11-517H2v6OOORP11-517H2v7.fasta	CCR6,RP11-517H2.6,RP11-517H2.8,RP11-517H2.7,
../firstrun/newGeneCopies/TEX28/TEX28_partitions/TEX28_group1.fasta	../firstrun/newGeneCopies/TEX28/TEX28_partitions/TEX28_group1_TEX28OOOTEX28P1OOOTEX28P2.fasta	CH17-128G5.1,TEX28P2,OPN1MW3,TEX28,TKTL1,TEX28P1,OPN1MW,OPN1MW2,OPN1LW,
../firstrun/newGeneCopies/YY1AP1/YY1AP1_partitions/YY1AP1_group1.fasta	../firstrun/newGeneCopies/YY1AP1/YY1AP1_partitions/YY1AP1_group1_YY1AP1OOOASH1LOOOASH1L-AS1.fasta	ASH1L,RP11-29H23.5,RP11-29H23.7,YY1AP1,GON4L,DAP3,ASH1L-AS1,
../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group1.fasta	../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group1_P2RX3OOOSSRP1.fasta	SSRP1,P2RX3,
../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group3.fasta	../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group3_P2RX4OOOP2RX7OOOCAMKK2.fasta	P2RX7,RP11-340F14.6,Z98941.1,RP11-340F14.7,P2RX4,CAMKK2,
../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group2.fasta	../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group2_P2RX7.fasta	P2RX7,
../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group5.fasta	../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group5_P2RX5OOOP2RX5-TAX1BP3OOOCTNS.fasta	P2RX5,EMC6,CTNS,RP11-48B14.1,P2RX5-TAX1BP3,TAX1BP3,
../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group4.fasta	../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group4_P2RX2OOOPOLEOOORP13-554M15v5.fasta	RP13-554M15.5,POLE,P2RX2,
../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group6.fasta	../firstrun/newGeneCopies/P2RX/P2RX_partitions/P2RX_group6_P2RX1OOOCAMKK1.fasta	CAMKK1,P2RX1,
../firstrun/newGeneCopies/SPDYE8/SPDYE8_partitions/SPDYE8_group1.fasta	../firstrun/newGeneCopies/SPDYE8/SPDYE8_partitions/SPDYE8_group1_SPDYE8OOOAC004951v6OOOAC004980v9.fasta	PMS2CL,PMS2P2,SPDYE3,SPDYE10P,POLR2J4,PMS2P8,SPDYE13P,SPDYE14,SPDYE1,RNF216P1,POLR2J3,SPDYE5,SPDYE2,SPDYE14P,PMS2P4,RP5-1165K10.2,SPDYE21,PMS2P1,SPDYE8,SPDYE11,PMS2P6,AC004951.6,SPDYE19P,CH17-264B6.1,CH17-264B6.6,SPDYE2B,AC004980.9,SPDYE7P,RBAK-RBAKDN,SPDYE13,RP11-514P8.10,DTX2P1-UPK3BP1-PMS2P11,SPDYE18,SPDYE9,SPDYE15,RP11-467H10.2,SPDYE20P,SPDYE12P,PMS2P7,SPDYE6,CH17-264B6.3,SPDYE16,PMS2P10,SPDYE17,SPDYE15P,RP5-1022I14.2,RP11-514P8.7,RP11-577H5.5,
../firstrun/newGeneCopies/CLCF1/CLCF1_partitions/CLCF1_group1.fasta	../firstrun/newGeneCopies/CLCF1/CLCF1_partitions/CLCF1_group1_CLCF1OOOAP003419v11OOOCTC-1337H24v4.fasta	CTC-1337H24.4,RAD9A,CLCF1,AP003419.11,RN7SKP239,
../firstrun/newGeneCopies/PTPN12/PTPN12_partitions/PTPN12_group2.fasta	../firstrun/newGeneCopies/PTPN12/PTPN12_partitions/PTPN12_group2_PTPN12.fasta	PTPN12,
../firstrun/newGeneCopies/PTPN12/PTPN12_partitions/PTPN12_group1.fasta	../firstrun/newGeneCopies/PTPN12/PTPN12_partitions/PTPN12_group1_PTPN12.fasta	PTPN12,
../firstrun/newGeneCopies/SIGLEC14/SIGLEC14_partitions/SIGLEC14_group1.fasta	../firstrun/newGeneCopies/SIGLEC14/SIGLEC14_partitions/SIGLEC14_group1_SIGLEC14OOOLLNLR-470E3v1OOORPL7P51.fasta	SIGLEC5,RPL7P51,LLNLR-470E3.1,SIGLEC14,
../firstrun/newGeneCopies/WDR92/WDR92_partitions/WDR92_group1.fasta	../firstrun/newGeneCopies/WDR92/WDR92_partitions/WDR92_group1_WDR92OOOPNO1OOOPPIAP64.fasta	WDR92,RP11-474G23.1,PPIAP64,PNO1,
../firstrun/newGeneCopies/ZNF383/ZNF383_partitions/ZNF383_group1.fasta	../firstrun/newGeneCopies/ZNF383/ZNF383_partitions/ZNF383_group1_ZNF383OOOCTD-3220F14v1OOOZNF585B.fasta	ZNF383,ZNF585B,CTD-3220F14.1,
../firstrun/newGeneCopies/TNNC1/TNNC1_partitions/TNNC1_group1.fasta	../firstrun/newGeneCopies/TNNC1/TNNC1_partitions/TNNC1_group1_TNNC1OOONISCH.fasta	TNNC1,NISCH,
../firstrun/newGeneCopies/ARL14EPL/ARL14EPL_partitions/ARL14EPL_group1.fasta	../firstrun/newGeneCopies/ARL14EPL/ARL14EPL_partitions/ARL14EPL_group1_ARL14EPLOOOCTD-2287O16v1.fasta	ARL14EPL,CTD-2287O16.1,
../firstrun/newGeneCopies/FBXO22/FBXO22_partitions/FBXO22_group1.fasta	../firstrun/newGeneCopies/FBXO22/FBXO22_partitions/FBXO22_group1_FBXO22OOONRG4OOOUBE2Q2.fasta	UBE2Q2,NRG4,FBXO22,
../firstrun/newGeneCopies/SULT4A1/SULT4A1_partitions/SULT4A1_group1.fasta	../firstrun/newGeneCopies/SULT4A1/SULT4A1_partitions/SULT4A1_group1_SULT4A1.fasta	SULT4A1,
../firstrun/newGeneCopies/RAB1B/RAB1B_partitions/RAB1B_group3.fasta	../firstrun/newGeneCopies/RAB1B/RAB1B_partitions/RAB1B_group3_RAB1BOOOCNIH2OOOKLC2.fasta	RP11-867G23.2,RP11-867G23.3,RP11-867G23.1,RP11-867G23.4,KLC2,RAB1B,CNIH2,
../firstrun/newGeneCopies/RPL6/RPL6_partitions/RPL6_group21.fasta	../firstrun/newGeneCopies/RPL6/RPL6_partitions/RPL6_group21_RPL6OOOPTPN11.fasta	PTPN11,RPL6,
../firstrun/newGeneCopies/FOXL3/FOXL3_partitions/FOXL3_group1.fasta	../firstrun/newGeneCopies/FOXL3/FOXL3_partitions/FOXL3_group1_FOXL3.fasta	FOXL3,
../firstrun/newGeneCopies/CALR3/CALR3_partitions/CALR3_group1.fasta	../firstrun/newGeneCopies/CALR3/CALR3_partitions/CALR3_group1_CALR3OOOC19orf44OOOCTD-3222D19v2.fasta	C19orf44,CALR3,CTD-3222D19.2,
../firstrun/newGeneCopies/ZMAT1/ZMAT1_partitions/ZMAT1_group3.fasta	../firstrun/newGeneCopies/ZMAT1/ZMAT1_partitions/ZMAT1_group3_ZMAT1OOORNU6-345POOORP1-3E10v2.fasta	ZMAT1,RNU6-345P,RP1-3E10.2,
../firstrun/newGeneCopies/CDH17/CDH17_partitions/CDH17_group1.fasta	../firstrun/newGeneCopies/CDH17/CDH17_partitions/CDH17_group1_CDH17OOOKB-1247B1v1.fasta	KB-1247B1.1,CDH17,
../firstrun/newGeneCopies/G6PC3/G6PC3_partitions/G6PC3_group1.fasta	../firstrun/newGeneCopies/G6PC3/G6PC3_partitions/G6PC3_group1_G6PC3OOOHDAC5OOOLSM12.fasta	G6PC3,HDAC5,LSM12,
../firstrun/newGeneCopies/PCDHGC/PCDHGC_partitions/PCDHGC_group1.fasta	../firstrun/newGeneCopies/PCDHGC/PCDHGC_partitions/PCDHGC_group1_PCDHGC3OOOPCDHGC4OOOPCDHGC5.fasta	PCDHGA8,PCDHGB6,PCDHGA3,PCDHGA10,PCDHGB2,PCDHGB7,PCDHGA7,RN7SL68P,PCDHGB5,PCDHGA12,PCDHGC3,PCDHGA9,PCDHGC4,PCDHGB1,PCDHGA2,PCDHGB4,PCDHGA11,PCDHGA5,PCDHGA4,PCDHGA6,DIAPH1,PCDHGB3,CTD-2024I7.18,PCDHGA1,PCDHGC5,
../firstrun/newGeneCopies/C2/C2_partitions/C2_group2.fasta	../firstrun/newGeneCopies/C2/C2_partitions/C2_group2_C2OOOC2-AS1OOOC4B-AS1.fasta	C2-AS1,EHMT2,XXbac-BPG116M5.17,ZBTB12,C4B-AS1,C2,CYP21A2,CFB,
../firstrun/newGeneCopies/HYDIN/HYDIN_partitions/HYDIN_group19.fasta	../firstrun/newGeneCopies/HYDIN/HYDIN_partitions/HYDIN_group19_HYDIN.fasta	HYDIN,
../firstrun/newGeneCopies/HYDIN/HYDIN_partitions/HYDIN_group1.fasta	../firstrun/newGeneCopies/HYDIN/HYDIN_partitions/HYDIN_group1_HYDINOOOHYDIN2OOOAC027281v1.fasta	RP11-640M9.4,RNA5SP536,VAC14,HYDIN2,HYDIN,RP11-23E19.2,RNU6ATAC25P,RP4-565E6.1,RP11-301M17.2,RNA5SP52,RP11-301M17.1,RP11-23E19.1,NBPF9,RP11-481N16.1,ENSG10010135847.1,RP11-666A1.4,NBPF15,RNA5SP57,CH17-78J1.1,AC027281.1,LINC02805,
../firstrun/newGeneCopies/INPP5E/INPP5E_partitions/INPP5E_group1.fasta	../firstrun/newGeneCopies/INPP5E/INPP5E_partitions/INPP5E_group1_INPP5EOOOSEC16A.fasta	SEC16A,INPP5E,
../firstrun/newGeneCopies/ZNF658/ZNF658_partitions/ZNF658_group1.fasta	../firstrun/newGeneCopies/ZNF658/ZNF658_partitions/ZNF658_group1_ZNF658OOOZNF658BOOORP11-1082I11v2.fasta	ZNF658,RP11-1082I11.2,RP11-286O1.1,SKP1P3,ZNF658B,
../firstrun/newGeneCopies/CNGB3/CNGB3_partitions/CNGB3_group5.fasta	../firstrun/newGeneCopies/CNGB3/CNGB3_partitions/CNGB3_group5_CNGB3.fasta	CNGB3,
../firstrun/newGeneCopies/CNGB3/CNGB3_partitions/CNGB3_group4.fasta	../firstrun/newGeneCopies/CNGB3/CNGB3_partitions/CNGB3_group4_CNGB3OOOCPNE3.fasta	CNGB3,CPNE3,
../firstrun/newGeneCopies/CNGB3/CNGB3_partitions/CNGB3_group8.fasta	../firstrun/newGeneCopies/CNGB3/CNGB3_partitions/CNGB3_group8_CNGB3OOORP11-386D6v1.fasta	CNGB3,RP11-386D6.1,
../firstrun/newGeneCopies/CNGB3/CNGB3_partitions/CNGB3_group6.fasta	../firstrun/newGeneCopies/CNGB3/CNGB3_partitions/CNGB3_group6_CNGB3OOOGOLGA2P1OOOUBE2Q2P10.fasta	CNGB3,GOLGA2P1,UBE2Q2P10,
../firstrun/newGeneCopies/B4GAT1/B4GAT1_partitions/B4GAT1_group1.fasta	../firstrun/newGeneCopies/B4GAT1/B4GAT1_partitions/B4GAT1_group1_B4GAT1OOOBRMS1OOORP11-867G23v12.fasta	BRMS1,RP11-867G23.12,RP11-867G23.8,B4GAT1,
../firstrun/newGeneCopies/UNC45B/UNC45B_partitions/UNC45B_group1.fasta	../firstrun/newGeneCopies/UNC45B/UNC45B_partitions/UNC45B_group1_UNC45BOOORP11-799D4v1OOORP11-799D4v2.fasta	SLC35G3,RP11-799D4.1,UNC45B,RP11-799D4.2,RP11-799D4.3,
../firstrun/newGeneCopies/ANLN/ANLN_partitions/ANLN_group1.fasta	../firstrun/newGeneCopies/ANLN/ANLN_partitions/ANLN_group1_ANLNOOOKIAA0895.fasta	ANLN,KIAA0895,
../firstrun/newGeneCopies/HNF4A/HNF4A_partitions/HNF4A_group1.fasta	../firstrun/newGeneCopies/HNF4A/HNF4A_partitions/HNF4A_group1_HNF4AOOOHNF4A-AS1OOOLINC01620.fasta	RP5-881L22.5,HNF4A,MIR3646,LINC01620,RP5-881L22.6,HNF4A-AS1,
../firstrun/newGeneCopies/UGT2B17/UGT2B17_partitions/UGT2B17_group2.fasta	../firstrun/newGeneCopies/UGT2B17/UGT2B17_partitions/UGT2B17_group2_UGT2B17OOOUGT2B15.fasta	UGT2B17,UGT2B15,
../firstrun/newGeneCopies/PARN/PARN_partitions/PARN_group1.fasta	../firstrun/newGeneCopies/PARN/PARN_partitions/PARN_group1_PARNOOOBFAROOORN7SL274P.fasta	BFAR,RN7SL274P,PARN,
../firstrun/newGeneCopies/SULT2A1/SULT2A1_partitions/SULT2A1_group1.fasta	../firstrun/newGeneCopies/SULT2A1/SULT2A1_partitions/SULT2A1_group1_SULT2A1.fasta	SULT2A1,
../firstrun/newGeneCopies/DEFA4/DEFA4_partitions/DEFA4_group1.fasta	../firstrun/newGeneCopies/DEFA4/DEFA4_partitions/DEFA4_group1_DEFA4OOOGS1-24F4v3.fasta	DEFA4,GS1-24F4.3,
../firstrun/newGeneCopies/RGCC/RGCC_partitions/RGCC_group1.fasta	../firstrun/newGeneCopies/RGCC/RGCC_partitions/RGCC_group1_RGCC.fasta	RGCC,
../firstrun/newGeneCopies/RP11-162P23.2/RP11-162P23.2_partitions/RP11-162P23.2_group1.fasta	../firstrun/newGeneCopies/RP11-162P23.2/RP11-162P23.2_partitions/RP11-162P23.2_group1_RP11-162P23v2OOOACAD10OOOALDH2.fasta	ACAD10,RP11-162P23.2,ALDH2,
../firstrun/newGeneCopies/SEL1L3/SEL1L3_partitions/SEL1L3_group1.fasta	../firstrun/newGeneCopies/SEL1L3/SEL1L3_partitions/SEL1L3_group1_SEL1L3OOORP11-302F12v10OOORP13-494C23v1.fasta	RP11-302F12.10,RP13-494C23.1,SEL1L3,SMIM20,
../firstrun/newGeneCopies/LRRC23/LRRC23_partitions/LRRC23_group66.fasta	../firstrun/newGeneCopies/LRRC23/LRRC23_partitions/LRRC23_group66_LRRC23OOODSTNP2OOOENO2.fasta	TPI1,LRRC23,SPSB2,DSTNP2,ENO2,U47924.32,RPL13P5,
../firstrun/newGeneCopies/TCAF2/TCAF2_partitions/TCAF2_group1.fasta	../firstrun/newGeneCopies/TCAF2/TCAF2_partitions/TCAF2_group1_TCAF2OOOTCAF2COOOTCAF2P1.fasta	RP11-298A10.3,TCAF2,TCAF2P1,AC073264.10,OR10AC1,EPHA1-AS1,TCAF2C,RP11-61L23.2,
../firstrun/newGeneCopies/POLR2/POLR2_partitions/POLR2_group013504.fasta	../firstrun/newGeneCopies/POLR2/POLR2_partitions/POLR2_group013504_POLR2JOOOPOLR2J2OOOPOLR2J3.fasta	AC004985.12,RASA4B,SPDYE7P,CH17-264B6.1,SPDYE8,SPDYE17,SPDYE12P,SPDYE16,SPDYE15P,SPDYE3,PMS2P7,RP5-1165K10.2,POLR2J4,UBE2D4,AC004980.9,AC093668.2,MIR4467,PMS2P3,AC004951.6,SPDYE21,UPK3BL1,POLR2J2,RP11-514P8.6,SPDYE1,PMS2P6,PMS2P2,SPDYE18,RP11-577H5.5,RP11-514P8.7,RASA4,PMS2P8,UPK3B,SPDYE2,PMS2P1,PMS2P4,SPDYE5,SPDYE15,RP11-514P8.10,DTX2P1-UPK3BP1-PMS2P11,POLR2J3,SPDYE9,SPDYE2B,SPDYE10P,RP11-467H10.2,SPDYE11,UPK3BL2,PMS2P10,AC004951.5,SPDYE14,SPDYE13,SPDYE6,CH17-264B6.6,RP5-1022I14.2,SPDYE13P,POLR2J,CH17-264B6.3,RASA4CP,SPDYE14P,LRWD1,
../firstrun/newGeneCopies/NDUFS8/NDUFS8_partitions/NDUFS8_group1.fasta	../firstrun/newGeneCopies/NDUFS8/NDUFS8_partitions/NDUFS8_group1_NDUFS8OOOALDH3B1OOOMIR4691.fasta	ALDH3B1,TCIRG1,MIR7113,NDUFS8,MIR4691,RP5-901A4.1,
../firstrun/newGeneCopies/IMMT/IMMT_partitions/IMMT_group1.fasta	../firstrun/newGeneCopies/IMMT/IMMT_partitions/IMMT_group1_IMMTOOOMIR4779OOOPTCD3.fasta	PTCD3,RP11-301O19.1,Y_RNA,IMMT,MIR4779,
../firstrun/newGeneCopies/COL18A1/COL18A1_partitions/COL18A1_group1.fasta	../firstrun/newGeneCopies/COL18A1/COL18A1_partitions/COL18A1_group1_COL18A1OOOCOL18A1-AS1OOOCOL18A1-AS2.fasta	LL21NC02-21A1.1,COL18A1,COL18A1-AS1,SLC19A1,MIR6815,COL18A1-AS2,
../firstrun/newGeneCopies/DIPK1B/DIPK1B_partitions/DIPK1B_group1.fasta	../firstrun/newGeneCopies/DIPK1B/DIPK1B_partitions/DIPK1B_group1_DIPK1BOOOENSG10010135443v1OOOSNHG7.fasta	SNORA17A,SNORA17B,SNHG7,ENSG10010135443.1,DIPK1B,
../firstrun/newGeneCopies/LYPLA2/LYPLA2_partitions/LYPLA2_group1.fasta	../firstrun/newGeneCopies/LYPLA2/LYPLA2_partitions/LYPLA2_group1_LYPLA2OOOGALEOOOPITHD1.fasta	LYPLA2,PITHD1,GALE,
../firstrun/newGeneCopies/PDSS1/PDSS1_partitions/PDSS1_group4.fasta	../firstrun/newGeneCopies/PDSS1/PDSS1_partitions/PDSS1_group4_PDSS1OOOABI1OOOHSPA8P3.fasta	HSPA8P3,RP13-16H11.8,ABI1,SELENOOLP,RP13-16H11.5,PDSS1,
../firstrun/newGeneCopies/SIPA1/SIPA1_partitions/SIPA1_group14.fasta	../firstrun/newGeneCopies/SIPA1/SIPA1_partitions/SIPA1_group14_SIPA1L3OOOCTB-102L5v7OOOCTB-102L5v8.fasta	DPF1,CTC-244M17.1,WDR87,CTC-450M9.1,SIPA1L3,RN7SL663P,CTB-102L5.7,CTB-102L5.8,
../firstrun/newGeneCopies/SIPA1/SIPA1_partitions/SIPA1_group6.fasta	../firstrun/newGeneCopies/SIPA1/SIPA1_partitions/SIPA1_group6_SIPA1OOOMIR4489OOOMIR4690.fasta	SIPA1,MIR4690,PCNX3,RELA,MIR4489,
../firstrun/newGeneCopies/TMEM100/TMEM100_partitions/TMEM100_group1.fasta	../firstrun/newGeneCopies/TMEM100/TMEM100_partitions/TMEM100_group1_TMEM100.fasta	TMEM100,
../firstrun/newGeneCopies/ZNF771/ZNF771_partitions/ZNF771_group1.fasta	../firstrun/newGeneCopies/ZNF771/ZNF771_partitions/ZNF771_group1_ZNF771OOODCTPP1OOOSNORA80C.fasta	ZNF771,DCTPP1,SNORA80C,
../firstrun/newGeneCopies/SMPD4/SMPD4_partitions/SMPD4_group1.fasta	../firstrun/newGeneCopies/SMPD4/SMPD4_partitions/SMPD4_group1_SMPD4OOOSMPD4BPOOOCCDC74B.fasta	SMPD4BP,MZT2B,TUBA3D,MZT2A,MIR4784,TUBA3E,SMPD4,CCDC74B,
../firstrun/newGeneCopies/CEBPD/CEBPD_partitions/CEBPD_group1.fasta	../firstrun/newGeneCopies/CEBPD/CEBPD_partitions/CEBPD_group1_CEBPDOOOSPIDR.fasta	CEBPD,SPIDR,
../firstrun/newGeneCopies/AKAP5/AKAP5_partitions/AKAP5_group1.fasta	../firstrun/newGeneCopies/AKAP5/AKAP5_partitions/AKAP5_group1_AKAP5OOOMTHFD1OOOZBTB25.fasta	ZBTB25,MTHFD1,AKAP5,
../firstrun/newGeneCopies/NTAN1/NTAN1_partitions/NTAN1_group4.fasta	../firstrun/newGeneCopies/NTAN1/NTAN1_partitions/NTAN1_group4_NTAN1OOOPDXDC1.fasta	PDXDC1,NTAN1,
../firstrun/newGeneCopies/CDKL4/CDKL4_partitions/CDKL4_group1.fasta	../firstrun/newGeneCopies/CDKL4/CDKL4_partitions/CDKL4_group1_CDKL4.fasta	CDKL4,
../firstrun/newGeneCopies/LRRC26/LRRC26_partitions/LRRC26_group1.fasta	../firstrun/newGeneCopies/LRRC26/LRRC26_partitions/LRRC26_group1_LRRC26OOOANAPC2OOOGRIN1.fasta	TMEM210,ANAPC2,RP11-350O14.18,MIR3621,GRIN1,LRRC26,
../firstrun/newGeneCopies/CTRL/CTRL_partitions/CTRL_group1.fasta	../firstrun/newGeneCopies/CTRL/CTRL_partitions/CTRL_group1_CTRLOOOCTC-479C5v12OOOPSKH1.fasta	CTRL,CTC-479C5.12,PSKH1,PSMB10,
../firstrun/newGeneCopies/PRDM7/PRDM7_partitions/PRDM7_group1.fasta	../firstrun/newGeneCopies/PRDM7/PRDM7_partitions/PRDM7_group1_PRDM7OOOAF146191v8OOOFAM166AP7.fasta	PRDM7,PRDM9,TUBB8P7,RP11-683L23.7,TUBBP5,AF146191.8,TUBB7P,FAM166AP7,TUBB8,TUBB8B,RP11-424E7.6,
../firstrun/newGeneCopies/AGAP6/AGAP6_partitions/AGAP6_group2.fasta	../firstrun/newGeneCopies/AGAP6/AGAP6_partitions/AGAP6_group2_AGAP6OOOTIMM23B-AGAP6OOOAGAP10P.fasta	BMS1P1,AGAP13P,RP11-144G6.12,RNA5SP315,AGAP14P,AGAP5,AGAP4,RNA5SP311,AGAP9,RP11-96C23.5,RNA5SP320,AGAP6,SYNPO2L-AS1,AGAP12P,BMS1P4,TIMM23B-AGAP6,AGAP7P,RP11-96C23.14,RNA5SP312,BMS1P3,RP11-96C23.13,RP11-574K11.29,AGAP11,RNA5SP317,RP11-96C23.10,RP11-324H6.8,RNA5SP310,PARGP1,AGAP10P,RP11-144G6.4,BMS1P4-AGAP5,
../firstrun/newGeneCopies/EIF1AD/EIF1AD_partitions/EIF1AD_group3.fasta	../firstrun/newGeneCopies/EIF1AD/EIF1AD_partitions/EIF1AD_group3_EIF1ADOOOBANF1.fasta	BANF1,EIF1AD,
../firstrun/newGeneCopies/RBMS1/RBMS1_partitions/RBMS1_group1.fasta	../firstrun/newGeneCopies/RBMS1/RBMS1_partitions/RBMS1_group1_RBMS1OOORBMS1P1OOOIRAK3.fasta	IRAK3,RBMS1,RP11-813C7.1,RBMS1P1,LINC02478,
../firstrun/newGeneCopies/RBMS1/RBMS1_partitions/RBMS1_group3.fasta	../firstrun/newGeneCopies/RBMS1/RBMS1_partitions/RBMS1_group3_RBMS1OOOMIR4785.fasta	RBMS1,MIR4785,
../firstrun/newGeneCopies/HES7/HES7_partitions/HES7_group1.fasta	../firstrun/newGeneCopies/HES7/HES7_partitions/HES7_group1_HES7OOOALOXE3.fasta	ALOXE3,HES7,
../firstrun/newGeneCopies/ZNF529/ZNF529_partitions/ZNF529_group1.fasta	../firstrun/newGeneCopies/ZNF529/ZNF529_partitions/ZNF529_group1_ZNF529OOOZNF529-AS1OOOAC092295v4.fasta	ZNF382,ZNF529,ZNF529-AS1,AC092295.4,
../firstrun/newGeneCopies/LTB/LTB_partitions/LTB_group17.fasta	../firstrun/newGeneCopies/LTB/LTB_partitions/LTB_group17_LTBOOOLST1OOONCR3.fasta	NCR3,TNF,LTB,LST1,
../firstrun/newGeneCopies/LTB/LTB_partitions/LTB_group21.fasta	../firstrun/newGeneCopies/LTB/LTB_partitions/LTB_group21_LTBP3OOORP11-856B14v10OOOSCYL1.fasta	SCYL1,RP11-856B14.10,LTBP3,
../firstrun/newGeneCopies/PSMD7/PSMD7_partitions/PSMD7_group7.fasta	../firstrun/newGeneCopies/PSMD7/PSMD7_partitions/PSMD7_group7_PSMD7OOOPSMD7-DTOOOAC009120v10.fasta	AC009120.11,PSMD7-DT,AC009120.9,AC009120.6,PSMD7,PPIAP49,AC009120.10,
../firstrun/newGeneCopies/PVALEF/PVALEF_partitions/PVALEF_group1.fasta	../firstrun/newGeneCopies/PVALEF/PVALEF_partitions/PVALEF_group1_PVALEFOOOAATK.fasta	AATK,PVALEF,
../firstrun/newGeneCopies/SLC25A/SLC25A_partitions/SLC25A_group236.fasta	../firstrun/newGeneCopies/SLC25A/SLC25A_partitions/SLC25A_group236_SLC25A15OOOMIR621OOOTPTE2P5.fasta	MIR621,TPTE2P5,SLC25A15,
../firstrun/newGeneCopies/SLC25A/SLC25A_partitions/SLC25A_group311.fasta	../firstrun/newGeneCopies/SLC25A/SLC25A_partitions/SLC25A_group311_SLC25A1OOOCLTCL1OOOLINC01311.fasta	SLC25A1,LINC01311,CLTCL1,
../firstrun/newGeneCopies/SLC25A/SLC25A_partitions/SLC25A_group204.fasta	../firstrun/newGeneCopies/SLC25A/SLC25A_partitions/SLC25A_group204_SLC25A45OOOFRMD8OOORP11-867O8v5.fasta	FRMD8,SLC25A45,RP11-867O8.5,
../firstrun/newGeneCopies/DCLRE1C/DCLRE1C_partitions/DCLRE1C_group1.fasta	../firstrun/newGeneCopies/DCLRE1C/DCLRE1C_partitions/DCLRE1C_group1_DCLRE1COOODCLRE1CP1OOOMEIG1.fasta	DCLRE1CP1,MEIG1,DCLRE1C,SUV39H2,
../firstrun/newGeneCopies/TMEM18/TMEM18_partitions/TMEM18_group1.fasta	../firstrun/newGeneCopies/TMEM18/TMEM18_partitions/TMEM18_group1_TMEM18OOOTMEM18-DTOOOAC092159v3.fasta	TMEM18,RP11-455F15.1,AC092159.3,TMEM18-DT,
../firstrun/newGeneCopies/CRLF2/CRLF2_partitions/CRLF2_group2.fasta	../firstrun/newGeneCopies/CRLF2/CRLF2_partitions/CRLF2_group2_CRLF2.fasta	CRLF2,
../firstrun/newGeneCopies/RP11-343C2.11/RP11-343C2.11_partitions/RP11-343C2.11_group1.fasta	../firstrun/newGeneCopies/RP11-343C2.11/RP11-343C2.11_partitions/RP11-343C2.11_group1_RP11-343C2v11OOOCOG8OOONIP7.fasta	VPS4A,COG8,PDF,RP11-343C2.12,RP11-343C2.9,TMED6,TERF2,RP11-343C2.7,RP11-343C2.11,SNTB2,NIP7,
../firstrun/newGeneCopies/RBM8A/RBM8A_partitions/RBM8A_group1.fasta	../firstrun/newGeneCopies/RBM8A/RBM8A_partitions/RBM8A_group1_RBM8AOOOC14orf39OOOCH17-270A2v2.fasta	CH17-270A2.2,LIX1L-AS1,GNRHR2,RBM8A,PEX11B,LIX1L,C14orf39,RBM8B,GNRHR2P1,
../firstrun/newGeneCopies/LSS/LSS_partitions/LSS_group16.fasta	../firstrun/newGeneCopies/LSS/LSS_partitions/LSS_group16_LSSOOOAP001468v58OOOAP001469v5.fasta	LSS,AP001469.5,MCM3AP-AS1,AP001468.58,
../firstrun/newGeneCopies/LRRC66/LRRC66_partitions/LRRC66_group1.fasta	../firstrun/newGeneCopies/LRRC66/LRRC66_partitions/LRRC66_group1_LRRC66OOOSGCB.fasta	SGCB,LRRC66,
../firstrun/newGeneCopies/H4C14/H4C14_partitions/H4C14_group1.fasta	../firstrun/newGeneCopies/H4C14/H4C14_partitions/H4C14_group1_H4C14OOOH2AC18OOOH2AC19.fasta	H2BC19P,H3C15,H2AC19,H3C14,H4C15,H4C14,H2AC18,H2BC20P,RP11-196G18.23,
../firstrun/newGeneCopies/PHOSPHO2/PHOSPHO2_partitions/PHOSPHO2_group1.fasta	../firstrun/newGeneCopies/PHOSPHO2/PHOSPHO2_partitions/PHOSPHO2_group1_PHOSPHO2OOOCCDC173OOOKLHL23.fasta	PHOSPHO2,CCDC173,KLHL23,
../firstrun/newGeneCopies/IDH3G/IDH3G_partitions/IDH3G_group1.fasta	../firstrun/newGeneCopies/IDH3G/IDH3G_partitions/IDH3G_group1_IDH3GOOOSRPK3OOOSSR4.fasta	SRPK3,IDH3G,SSR4,
../firstrun/newGeneCopies/SLC29A4/SLC29A4_partitions/SLC29A4_group1.fasta	../firstrun/newGeneCopies/SLC29A4/SLC29A4_partitions/SLC29A4_group1_SLC29A4OOOSLC29A4P1OOOSLC29A4P2.fasta	MIR4283-2,RP11-220H4.2,SLC29A4,RP5-965K10.3,MIR4283-1,SLC29A4P1,SLC29A4P2,TNRC18P2,TNRC18P3,TNRC18,
../firstrun/newGeneCopies/UBE2V1/UBE2V1_partitions/UBE2V1_group17.fasta	../firstrun/newGeneCopies/UBE2V1/UBE2V1_partitions/UBE2V1_group17_PEDS1-UBE2V1OOOUBE2V1OOOPEDS1.fasta	PEDS1-UBE2V1,UBE2V1,PEDS1,
../firstrun/newGeneCopies/ZBTB25/ZBTB25_partitions/ZBTB25_group1.fasta	../firstrun/newGeneCopies/ZBTB25/ZBTB25_partitions/ZBTB25_group1_ZBTB25OOOCTD-2555O16v2OOOMTHFD1.fasta	CTD-2555O16.2,ZBTB25,MTHFD1,
../firstrun/newGeneCopies/ZBTB25/ZBTB25_partitions/ZBTB25_group2.fasta	../firstrun/newGeneCopies/ZBTB25/ZBTB25_partitions/ZBTB25_group2_ZBTB25OOOAKAP5OOOZBTB1.fasta	ZBTB1,ZBTB25,AKAP5,
../firstrun/newGeneCopies/CD4/CD4_partitions/CD4_group1.fasta	../firstrun/newGeneCopies/CD4/CD4_partitions/CD4_group1_CD4OOOGPR162OOORN7SL380P.fasta	CD4,GPR162,RN7SL380P,
../firstrun/newGeneCopies/ZNF75/ZNF75_partitions/ZNF75_group12.fasta	../firstrun/newGeneCopies/ZNF75/ZNF75_partitions/ZNF75_group12_ZNF75DOOORP13-210D15v10OOOZNF449.fasta	ZNF75D,RP13-210D15.10,ZNF449,
../firstrun/newGeneCopies/ZNF75/ZNF75_partitions/ZNF75_group9.fasta	../firstrun/newGeneCopies/ZNF75/ZNF75_partitions/ZNF75_group9_ZNF75DOOOETDAOOOETDB.fasta	SMIM10L2B-AS1,ZNF75D,ETDB,RP13-210D15.8,RP11-85L21.6,ETDA,
../firstrun/newGeneCopies/OSCAR/OSCAR_partitions/OSCAR_group1.fasta	../firstrun/newGeneCopies/OSCAR/OSCAR_partitions/OSCAR_group1_OSCAROOONDUFA3.fasta	NDUFA3,OSCAR,
../firstrun/newGeneCopies/OAZ3/OAZ3_partitions/OAZ3_group1.fasta	../firstrun/newGeneCopies/OAZ3/OAZ3_partitions/OAZ3_group1_OAZ3OOOMRPL9OOORP11-98D18v15.fasta	TDRKH,RP11-98D18.16,RP11-98D18.2,RP11-98D18.15,OAZ3,MRPL9,RP11-98D18.3,
../firstrun/newGeneCopies/SAR1B/SAR1B_partitions/SAR1B_group40.fasta	../firstrun/newGeneCopies/SAR1B/SAR1B_partitions/SAR1B_group40_SAR1BOOORNU6-1311POOOSEC24A.fasta	SAR1B,RNU6-1311P,SEC24A,
../firstrun/newGeneCopies/ESYT2/ESYT2_partitions/ESYT2_group4.fasta	../firstrun/newGeneCopies/ESYT2/ESYT2_partitions/ESYT2_group4_ESYT2.fasta	ESYT2,
../firstrun/newGeneCopies/ESYT2/ESYT2_partitions/ESYT2_group1.fasta	../firstrun/newGeneCopies/ESYT2/ESYT2_partitions/ESYT2_group1_ESYT2.fasta	ESYT2,
../firstrun/newGeneCopies/ACAA2/ACAA2_partitions/ACAA2_group1.fasta	../firstrun/newGeneCopies/ACAA2/ACAA2_partitions/ACAA2_group1_ACAA2OOOENSG10010137176v1OOORP11-886H22v1.fasta	ENSG10010137176.1,SNHG22,ACAA2,SCARNA17,RP11-886H22.1,
../firstrun/newGeneCopies/AKNAD1/AKNAD1_partitions/AKNAD1_group1.fasta	../firstrun/newGeneCopies/AKNAD1/AKNAD1_partitions/AKNAD1_group1_AKNAD1OOOAL449266v1OOOCLCC1.fasta	AL449266.1,SPATA42,GPSM2,CLCC1,AKNAD1,
../firstrun/newGeneCopies/KDM5A/KDM5A_partitions/KDM5A_group1.fasta	../firstrun/newGeneCopies/KDM5A/KDM5A_partitions/KDM5A_group1_KDM5AOOOCCDC77OOORP11-283I3v6.fasta	KDM5A,CCDC77,RP11-283I3.6,
../firstrun/newGeneCopies/ZNF254/ZNF254_partitions/ZNF254_group16.fasta	../firstrun/newGeneCopies/ZNF254/ZNF254_partitions/ZNF254_group16_ZNF254OOOBNIP3P40OOOCTD-2017D11v1.fasta	BNIP3P40,ZNF254,CTD-2017D11.1,CTD-2017D11.2,
../firstrun/newGeneCopies/CASKIN2/CASKIN2_partitions/CASKIN2_group1.fasta	../firstrun/newGeneCopies/CASKIN2/CASKIN2_partitions/CASKIN2_group1_CASKIN2OOOMIR6785OOOTMEM94.fasta	TMEM94,TSEN54,CASKIN2,MIR6785,
../firstrun/newGeneCopies/SPATA13/SPATA13_partitions/SPATA13_group6.fasta	../firstrun/newGeneCopies/SPATA13/SPATA13_partitions/SPATA13_group6_SPATA13OOOSPATA13-AS1OOOC1QTNF9.fasta	RP11-307N16.6,SPATA13-AS1,SPATA13,C1QTNF9,
../firstrun/newGeneCopies/SPATA13/SPATA13_partitions/SPATA13_group3.fasta	../firstrun/newGeneCopies/SPATA13/SPATA13_partitions/SPATA13_group3_SPATA13OOOMIR2276OOORP11-307N16v6.fasta	RP11-307N16.6,SPATA13,MIR2276,
../firstrun/newGeneCopies/SPATA13/SPATA13_partitions/SPATA13_group2.fasta	../firstrun/newGeneCopies/SPATA13/SPATA13_partitions/SPATA13_group2_SPATA13OOORP11-307N16v6.fasta	RP11-307N16.6,SPATA13,
../firstrun/newGeneCopies/ZNF567/ZNF567_partitions/ZNF567_group1.fasta	../firstrun/newGeneCopies/ZNF567/ZNF567_partitions/ZNF567_group1_ZNF567OOOLINC01534OOOZNF850.fasta	LINC01534,ZNF567,ZNF850,
../firstrun/newGeneCopies/PPP2R2D/PPP2R2D_partitions/PPP2R2D_group3.fasta	../firstrun/newGeneCopies/PPP2R2D/PPP2R2D_partitions/PPP2R2D_group3_PPP2R2D.fasta	PPP2R2D,
../firstrun/newGeneCopies/ANXA9/ANXA9_partitions/ANXA9_group1.fasta	../firstrun/newGeneCopies/ANXA9/ANXA9_partitions/ANXA9_group1_ANXA9OOOMINDY1.fasta	ANXA9,MINDY1,
../firstrun/newGeneCopies/CHL1/CHL1_partitions/CHL1_group1.fasta	../firstrun/newGeneCopies/CHL1/CHL1_partitions/CHL1_group1_CHL1OOOCHL1-AS2OOORP11-385A18v1.fasta	CHL1,RP11-385A18.1,CHL1-AS2,
../firstrun/newGeneCopies/CHL1/CHL1_partitions/CHL1_group4.fasta	../firstrun/newGeneCopies/CHL1/CHL1_partitions/CHL1_group4_CHL1OOOCHL1-AS1OOORPS8P6.fasta	CHL1-AS1,CHL1,RPS8P6,
../firstrun/newGeneCopies/LMAN/LMAN_partitions/LMAN_group4.fasta	../firstrun/newGeneCopies/LMAN/LMAN_partitions/LMAN_group4_LMAN1LOOOCPLX3OOORP11-414J4v2.fasta	CPLX3,RP11-414J4.2,LMAN1L,
../firstrun/newGeneCopies/LMAN/LMAN_partitions/LMAN_group1.fasta	../firstrun/newGeneCopies/LMAN/LMAN_partitions/LMAN_group1_LMAN2LOOOFER1L5.fasta	LMAN2L,FER1L5,
../firstrun/newGeneCopies/NDRG1/NDRG1_partitions/NDRG1_group1.fasta	../firstrun/newGeneCopies/NDRG1/NDRG1_partitions/NDRG1_group1_NDRG1.fasta	NDRG1,
../firstrun/newGeneCopies/NETO2/NETO2_partitions/NETO2_group2.fasta	../firstrun/newGeneCopies/NETO2/NETO2_partitions/NETO2_group2_NETO2OOOITFG1-AS1.fasta	ITFG1-AS1,NETO2,
../firstrun/newGeneCopies/FGF4/FGF4_partitions/FGF4_group1.fasta	../firstrun/newGeneCopies/FGF4/FGF4_partitions/FGF4_group1_FGF4.fasta	FGF4,
../firstrun/newGeneCopies/NOBOX/NOBOX_partitions/NOBOX_group1.fasta	../firstrun/newGeneCopies/NOBOX/NOBOX_partitions/NOBOX_group1_NOBOX.fasta	NOBOX,
../firstrun/newGeneCopies/EEF1A2/EEF1A2_partitions/EEF1A2_group1.fasta	../firstrun/newGeneCopies/EEF1A2/EEF1A2_partitions/EEF1A2_group1_EEF1A2.fasta	EEF1A2,
../firstrun/newGeneCopies/GGT2/GGT2_partitions/GGT2_group1.fasta	../firstrun/newGeneCopies/GGT2/GGT2_partitions/GGT2_group1_GGT2OOOAC008132v14OOOAC027612v4.fasta	GGTLC3,IGSF3,FAM247B,KB-1995A5.6,GGTLC1,GGT3P,GGTLC2,GGT8P,POM121L1P,KB-1592A4.16,GGT2,RP4-614C10.4,RP4-614C10.5,RP5-831C21.1,AC008132.14,GGT5,GGTLC5P,POM121L3P,RP11-341D18.5,GGTLC4P,POM121L9P,GGT1,GGT4P,AC027612.4,
../firstrun/newGeneCopies/VAV2/VAV2_partitions/VAV2_group33.fasta	../firstrun/newGeneCopies/VAV2/VAV2_partitions/VAV2_group33_VAV2.fasta	VAV2,
../firstrun/newGeneCopies/VAV2/VAV2_partitions/VAV2_group32.fasta	../firstrun/newGeneCopies/VAV2/VAV2_partitions/VAV2_group32_VAV2.fasta	VAV2,
../firstrun/newGeneCopies/VAV2/VAV2_partitions/VAV2_group31.fasta	../firstrun/newGeneCopies/VAV2/VAV2_partitions/VAV2_group31_VAV2.fasta	VAV2,
../firstrun/newGeneCopies/ADAM30/ADAM30_partitions/ADAM30_group1.fasta	../firstrun/newGeneCopies/ADAM30/ADAM30_partitions/ADAM30_group1_ADAM30.fasta	ADAM30,
../firstrun/newGeneCopies/ENSA/ENSA_partitions/ENSA_group2.fasta	../firstrun/newGeneCopies/ENSA/ENSA_partitions/ENSA_group2_ENSAOOOENSAP2OOOLINC02301.fasta	LINC02301,ENSA,ENSAP2,
../firstrun/newGeneCopies/ENSA/ENSA_partitions/ENSA_group1.fasta	../firstrun/newGeneCopies/ENSA/ENSA_partitions/ENSA_group1_ENSAOOOENSG10010137222v1OOOU4.fasta	U4,ENSA,ENSG10010137222.1,
../firstrun/newGeneCopies/IFITM2/IFITM2_partitions/IFITM2_group1.fasta	../firstrun/newGeneCopies/IFITM2/IFITM2_partitions/IFITM2_group1_IFITM2OOOAC136475v8OOOIFITM1.fasta	IFITM3,RP11-326C3.4,IFITM1,RP11-326C3.11,IFITM2,AC136475.8,RP11-326C3.17,RP11-326C3.7,RP11-326C3.10,
../firstrun/newGeneCopies/PRKX/PRKX_partitions/PRKX_group5.fasta	../firstrun/newGeneCopies/PRKX/PRKX_partitions/PRKX_group5_PRKXOOOPRKX-AS1OOOPRKXP1.fasta	RP11-526I2.5,PRKXP1,RNU6-941P,PRKX-AS1,RNU6-322P,Y_RNA,RNU6-146P,LINS1,PRKY,PRKX,RP11-526I2.1,RNU6-181P,
../firstrun/newGeneCopies/NDUFB1/NDUFB1_partitions/NDUFB1_group3.fasta	../firstrun/newGeneCopies/NDUFB1/NDUFB1_partitions/NDUFB1_group3_NDUFB1OOOCPSF2.fasta	NDUFB1,CPSF2,
../firstrun/newGeneCopies/ACACA/ACACA_partitions/ACACA_group5.fasta	../firstrun/newGeneCopies/ACACA/ACACA_partitions/ACACA_group5_ACACAOOOC17orf78OOOHMGB1P24.fasta	RP11-19G24.1,HMGB1P24,ACACA,C17orf78,TADA2A,RP11-378E13.3,RP11-19G24.2,RP11-378E13.4,
../firstrun/newGeneCopies/ZNF592/ZNF592_partitions/ZNF592_group1.fasta	../firstrun/newGeneCopies/ZNF592/ZNF592_partitions/ZNF592_group1_ZNF592OOODLGAP1OOORN7SL39P.fasta	ZNF592,RP11-565O12.1,RP11-7M10.2,RN7SL39P,DLGAP1,RP11-710M11.1,
../firstrun/newGeneCopies/PACS/PACS_partitions/PACS_group3.fasta	../firstrun/newGeneCopies/PACS/PACS_partitions/PACS_group3_PACS1OOORP11-755F10v1.fasta	RP11-755F10.1,PACS1,
../firstrun/newGeneCopies/PACS/PACS_partitions/PACS_group2.fasta	../firstrun/newGeneCopies/PACS/PACS_partitions/PACS_group2_PACS1OOORP11-1167A19v2OOOSF3B2.fasta	RP11-1167A19.2,SF3B2,PACS1,
../firstrun/newGeneCopies/PACS/PACS_partitions/PACS_group5.fasta	../firstrun/newGeneCopies/PACS/PACS_partitions/PACS_group5_PACS2OOOBRF1OOORP11-521B24v4.fasta	RPS20P33,TEX22,PACS2,BRF1,RP11-521B24.4,
../firstrun/newGeneCopies/DHODH/DHODH_partitions/DHODH_group2.fasta	../firstrun/newGeneCopies/DHODH/DHODH_partitions/DHODH_group2_DHODHOOOATP5F1AP3.fasta	DHODH,ATP5F1AP3,
../firstrun/newGeneCopies/RIC/RIC_partitions/RIC_group11.fasta	../firstrun/newGeneCopies/RIC/RIC_partitions/RIC_group11_RIC3OOORIC3-DTOOOTUB.fasta	TUB,RIC3,RIC3-DT,
../firstrun/newGeneCopies/RIC/RIC_partitions/RIC_group10.fasta	../firstrun/newGeneCopies/RIC/RIC_partitions/RIC_group10_RIC8AOOOBET1LOOOMIR6743.fasta	SIRT3,RIC8A,MIR6743,BET1L,RP11-304M2.5,
../firstrun/newGeneCopies/ANO1/ANO1_partitions/ANO1_group1.fasta	../firstrun/newGeneCopies/ANO1/ANO1_partitions/ANO1_group1_ANO1OOOANO1-AS1OOOLINC02584.fasta	LINC02584,ANO1-AS1,RP11-805J14.3,RNU6-1175P,ANO1,
../firstrun/newGeneCopies/TRIB3/TRIB3_partitions/TRIB3_group1.fasta	../firstrun/newGeneCopies/TRIB3/TRIB3_partitions/TRIB3_group1_TRIB3.fasta	TRIB3,
../firstrun/newGeneCopies/MAPK4/MAPK4_partitions/MAPK4_group1.fasta	../firstrun/newGeneCopies/MAPK4/MAPK4_partitions/MAPK4_group1_MAPK4.fasta	MAPK4,
../firstrun/newGeneCopies/MAPK4/MAPK4_partitions/MAPK4_group2.fasta	../firstrun/newGeneCopies/MAPK4/MAPK4_partitions/MAPK4_group2_MAPK4.fasta	MAPK4,
../firstrun/newGeneCopies/MAPK4/MAPK4_partitions/MAPK4_group3.fasta	../firstrun/newGeneCopies/MAPK4/MAPK4_partitions/MAPK4_group3_MAPK4OOORP11-10I6v2.fasta	MAPK4,RP11-10I6.2,
../firstrun/newGeneCopies/MAPK4/MAPK4_partitions/MAPK4_group4.fasta	../firstrun/newGeneCopies/MAPK4/MAPK4_partitions/MAPK4_group4_MAPK4.fasta	MAPK4,
../firstrun/newGeneCopies/UBXN7/UBXN7_partitions/UBXN7_group1.fasta	../firstrun/newGeneCopies/UBXN7/UBXN7_partitions/UBXN7_group1_UBXN7OOOUBXN7-AS1OOOAC083822v2.fasta	UBXN7,RNU6-1279P,RN7SL434P,UBXN7-AS1,RN7SL738P,AC083822.2,
../firstrun/newGeneCopies/NLGN3/NLGN3_partitions/NLGN3_group1.fasta	../firstrun/newGeneCopies/NLGN3/NLGN3_partitions/NLGN3_group1_NLGN3OOOMED12.fasta	MED12,NLGN3,
../firstrun/newGeneCopies/CCDC115/CCDC115_partitions/CCDC115_group1.fasta	../firstrun/newGeneCopies/CCDC115/CCDC115_partitions/CCDC115_group1_CCDC115OOOIMP4.fasta	CCDC115,IMP4,
../firstrun/newGeneCopies/PAGE2/PAGE2_partitions/PAGE2_group1.fasta	../firstrun/newGeneCopies/PAGE2/PAGE2_partitions/PAGE2_group1_PAGE2OOOPAGE2BOOORP11-382F24v1.fasta	PAGE2,RP11-382F24.1,PAGE2B,
../firstrun/newGeneCopies/AATK/AATK_partitions/AATK_group1.fasta	../firstrun/newGeneCopies/AATK/AATK_partitions/AATK_group1_AATKOOOBAIAP2OOOMIR1250.fasta	PVALEF,MIR338,MIR657,MIR1250,AATK,RP11-149I9.2,BAIAP2,MIR3065,
../firstrun/newGeneCopies/TXNIP/TXNIP_partitions/TXNIP_group1.fasta	../firstrun/newGeneCopies/TXNIP/TXNIP_partitions/TXNIP_group1_TXNIP.fasta	TXNIP,
../firstrun/newGeneCopies/CPNE3/CPNE3_partitions/CPNE3_group1.fasta	../firstrun/newGeneCopies/CPNE3/CPNE3_partitions/CPNE3_group1_CPNE3OOOCNGB3OOORMDN1.fasta	CNGB3,RMDN1,CPNE3,
../firstrun/newGeneCopies/FAHD2/FAHD2_partitions/FAHD2_group1.fasta	../firstrun/newGeneCopies/FAHD2/FAHD2_partitions/FAHD2_group1_FAHD2AOOOFAHD2BOOOFAHD2CP.fasta	AC008268.1,GPAT2P1,GPAT2,RP11-499E14.1,FAHD2A,GPAT2P2,FAHD2CP,FAHD2B,AC009238.6,
../firstrun/newGeneCopies/HDGFL1/HDGFL1_partitions/HDGFL1_group1.fasta	../firstrun/newGeneCopies/HDGFL1/HDGFL1_partitions/HDGFL1_group1_HDGFL1OOOCASC15.fasta	CASC15,HDGFL1,
../firstrun/newGeneCopies/NPIP/NPIP_partitions/NPIP_group004801.fasta	../firstrun/newGeneCopies/NPIP/NPIP_partitions/NPIP_group004801_NPIPA1OOONPIPA2OOONPIPA3.fasta	NPIPB11,PKD1P4,MIR6511B2,RP11-304L19.4,NPIPA3,RP11-345J4.11,MIR6511A1,PDXDC1,RP11-645C24.6,SMG1P5,RP11-231C14.10,RP11-231C14.5,UBL5P4,RP11-435I10.5,CTD-2547E10.5,NPIPA2,SMG1P7,RP11-82O18.2,MIR6770-1,RP11-677O4.6,RP11-252A24.3,NPIPB2,RP11-677O4.4,PKD1,NPIPB14P,TNFRSF17,PKD1P2,PDXDC2P-NPIPB14P,MIR6511A2,PKD1P3,Y_RNA,SMG1P3,RP11-252A24.8,RP11-680G24.1,RP11-467M13.2,NPIPB6,RP11-677O4.5,RP11-1348G14.6,RP11-435I10.6,NPIPB10P,NPIPB12,MIR6770-3,MIR6511B1,NPIPB4,NPIPB15,NPIPB13,SMG1P4,SMG1P6,RP11-57A19.4,RP11-231C14.8,PKD1P6,RP11-347C12.8,RP11-680G24.7,RP11-1212A22.8,RP11-368J21.4,NPIPB5,RP11-57A19.5,SMG1,NPIPB7,RP11-666O2.7,CH17-5A7.1,CH17-32G2.1,NPIPB3,NPIPB1P,TMC7,SULT1A1,NPIPA9,CLN3,NPIPA8,MIR6770-2,NPIPP1,RP11-166B2.9,PDPR2P,NPIPB8,RP11-1212A22.9,RP11-435I10.4,PKD1P6-NPIPP1,RP11-57A19.6,NPIPA1,SMG1P2,RP11-72I8.1,SNX29,RP11-1348G14.7,MIR6511A4,CTB-134H23.3,ENSG00000277983,SMG1P1,NPIPA5,PKD1P1,PKD1P5,RP11-1212A22.7,RP11-419C5.3,RP11-719K4.3,NPIPA7,RP11-719K4.6,AC138969.4,NPIPB9,ENSG00000283738,RP11-72I8.2,RP11-166B2.7,RP11-296I10.5,MIR6511A3,RP11-958N24.4,
../firstrun/newGeneCopies/FGD1/FGD1_partitions/FGD1_group1.fasta	../firstrun/newGeneCopies/FGD1/FGD1_partitions/FGD1_group1_FGD1OOOTSR2.fasta	FGD1,TSR2,
../firstrun/newGeneCopies/FGD1/FGD1_partitions/FGD1_group2.fasta	../firstrun/newGeneCopies/FGD1/FGD1_partitions/FGD1_group2_FGD1.fasta	FGD1,
../firstrun/newGeneCopies/MYT1/MYT1_partitions/MYT1_group9.fasta	../firstrun/newGeneCopies/MYT1/MYT1_partitions/MYT1_group9_MYT1OOONPBWR2OOOOPRL1.fasta	RP5-1022E24.5,OPRL1,NPBWR2,RP5-1022E24.7,RP5-1022E24.6,MYT1,
../firstrun/newGeneCopies/PI16/PI16_partitions/PI16_group1.fasta	../firstrun/newGeneCopies/PI16/PI16_partitions/PI16_group1_PI16.fasta	PI16,
../firstrun/newGeneCopies/TNKS1BP1/TNKS1BP1_partitions/TNKS1BP1_group1.fasta	../firstrun/newGeneCopies/TNKS1BP1/TNKS1BP1_partitions/TNKS1BP1_group1_TNKS1BP1OOORP11-872D17v4OOOSSRP1.fasta	SSRP1,RP11-872D17.4,TNKS1BP1,
../firstrun/newGeneCopies/FCGR1/FCGR1_partitions/FCGR1_group1.fasta	../firstrun/newGeneCopies/FCGR1/FCGR1_partitions/FCGR1_group1_FCGR1AOOOFCGR1BOOOFCGR1CP.fasta	RP11-439A17.10,FCGR1A,RP11-439A17.9,HIST2H2BB,H2BC18,H2BP2,RP11-196G18.3,FCGR1CP,FCGR1B,
../firstrun/newGeneCopies/TRIM16/TRIM16_partitions/TRIM16_group1.fasta	../firstrun/newGeneCopies/TRIM16/TRIM16_partitions/TRIM16_group1_TRIM16OOOTRIM16LOOOCDRT1.fasta	ZNF29P,TRIM16,FBXW10,TRIM16L,CDRT1,RP11-385D13.1,RP11-815I9.5,RP11-640I15.1,
../firstrun/newGeneCopies/ARHGAP25/ARHGAP25_partitions/ARHGAP25_group1.fasta	../firstrun/newGeneCopies/ARHGAP25/ARHGAP25_partitions/ARHGAP25_group1_ARHGAP25.fasta	ARHGAP25,
../firstrun/newGeneCopies/ARHGAP25/ARHGAP25_partitions/ARHGAP25_group2.fasta	../firstrun/newGeneCopies/ARHGAP25/ARHGAP25_partitions/ARHGAP25_group2_ARHGAP25.fasta	ARHGAP25,
../firstrun/newGeneCopies/ARHGAP25/ARHGAP25_partitions/ARHGAP25_group3.fasta	../firstrun/newGeneCopies/ARHGAP25/ARHGAP25_partitions/ARHGAP25_group3_ARHGAP25.fasta	ARHGAP25,
../firstrun/newGeneCopies/ARHGAP25/ARHGAP25_partitions/ARHGAP25_group4.fasta	../firstrun/newGeneCopies/ARHGAP25/ARHGAP25_partitions/ARHGAP25_group4_ARHGAP25OOOLINC01890.fasta	LINC01890,ARHGAP25,
../firstrun/newGeneCopies/PLA2G4C/PLA2G4C_partitions/PLA2G4C_group1.fasta	../firstrun/newGeneCopies/PLA2G4C/PLA2G4C_partitions/PLA2G4C_group1_PLA2G4COOOPLA2G4C-AS1OOOCTC-453G23v5.fasta	PLA2G4C,PLA2G4C-AS1,CTC-453G23.5,LIG1,
../firstrun/newGeneCopies/RBM23/RBM23_partitions/RBM23_group1.fasta	../firstrun/newGeneCopies/RBM23/RBM23_partitions/RBM23_group1_RBM23OOOPRMT5OOOPRMT5-AS1.fasta	PRMT5,RBM23,PRMT5-AS1,
../firstrun/newGeneCopies/DNAAF3/DNAAF3_partitions/DNAAF3_group1.fasta	../firstrun/newGeneCopies/DNAAF3/DNAAF3_partitions/DNAAF3_group1_DNAAF3OOODNAAF3-AS1OOOCTD-2587H24v4.fasta	SYT5,DNAAF3,ENSG10010134213.1,CTD-2587H24.4,TNNI3,DNAAF3-AS1,
../firstrun/newGeneCopies/PPIA/PPIA_partitions/PPIA_group20.fasta	../firstrun/newGeneCopies/PPIA/PPIA_partitions/PPIA_group20_PPIAOOOAC013436v5OOOH2AZ2.fasta	H2AZ2,PPIA,AC013436.5,
../firstrun/newGeneCopies/ALKBH4/ALKBH4_partitions/ALKBH4_group1.fasta	../firstrun/newGeneCopies/ALKBH4/ALKBH4_partitions/ALKBH4_group1_ALKBH4OOOLRWD1OOOMIR5090.fasta	ALKBH4,MIR5090,ORAI2,LRWD1,
../firstrun/newGeneCopies/KANSL3/KANSL3_partitions/KANSL3_group1.fasta	../firstrun/newGeneCopies/KANSL3/KANSL3_partitions/KANSL3_group1_KANSL3OOOFER1L5.fasta	KANSL3,FER1L5,
../firstrun/newGeneCopies/RRN3/RRN3_partitions/RRN3_group4.fasta	../firstrun/newGeneCopies/RRN3/RRN3_partitions/RRN3_group4_RRN3OOORRN3P1OOORRN3P2.fasta	SMG1P2,RP11-645C24.5,PDXDC1,SMG1P1,RRN3P3,RP11-645C24.4,SMG1P5,MIR3680-2,RP11-426C22.3,RRN3P2,RRN3P1,BANP,RP11-368N21.5,RP11-105C19.2,RP11-72I8.1,CA5A,LINC02890,SMG1,MIR3680-1,CTB-134H23.3,RRN3,CDR2,RP11-347C12.12,RP11-345J4.11,RP11-231C14.9,CTD-2288F12.1,RP11-231C14.10,SMG1P3,
../firstrun/newGeneCopies/THOC3/THOC3_partitions/THOC3_group1.fasta	../firstrun/newGeneCopies/THOC3/THOC3_partitions/THOC3_group1_THOC3OOOTHOC3-AS1OOOOR1X1P.fasta	RP11-423H2.1,RP11-91H12.4,OR1X5P,THOC3-AS1,RP11-423H2.5,OR1X1P,THOC3,
../firstrun/newGeneCopies/THOC3/THOC3_partitions/THOC3_group3.fasta	../firstrun/newGeneCopies/THOC3/THOC3_partitions/THOC3_group3_THOC3OOORP11-423H2v1OOORP11-826N14v1.fasta	RP11-826N14.1,RP11-423H2.1,THOC3,
../firstrun/newGeneCopies/CCDC40/CCDC40_partitions/CCDC40_group1.fasta	../firstrun/newGeneCopies/CCDC40/CCDC40_partitions/CCDC40_group1_CCDC40OOOGAAOOOMIR1268B.fasta	MIR1268B,GAA,TBC1D16,CCDC40,
../firstrun/newGeneCopies/TMED9/TMED9_partitions/TMED9_group1.fasta	../firstrun/newGeneCopies/TMED9/TMED9_partitions/TMED9_group1_TMED9OOOB4GALT7.fasta	B4GALT7,TMED9,
../firstrun/newGeneCopies/WASHC/WASHC_partitions/WASHC_group27.fasta	../firstrun/newGeneCopies/WASHC/WASHC_partitions/WASHC_group27_WASHC2AOOOWASHC2COOOFAM21EP.fasta	FAM21EP,FAM21FP,WASHC2A,RP11-671E7.1,WASHC2C,
../firstrun/newGeneCopies/WASHC/WASHC_partitions/WASHC_group6.fasta	../firstrun/newGeneCopies/WASHC/WASHC_partitions/WASHC_group6_WASHC1OOOAC008993v2OOOAC008993v3.fasta	DDX11L16,DDX11L5,PGM5-AS1,WASH4P,Z84812.4,AC008993.2,RP11-58A12.3,MIR1302-9HG,FAM138A,WASH5P,MIR6859-2,MIR1302-10,MIR6859-3,FAM138D,AC008993.3,AC140725.4,FAM138B,MIR6859-1,ENSG00000288284,MIR1302-11,DDX11L17,PGM5,ENSG00000288246,MIR1302-3,FAM138E,MIR1302-2,ENSG00000288336,RP11-87H9.5,AJ271736.10,FAM138C,WASH7P,RP11-395L14.19,WASH3P,WASH8P,WASH9P,FRG1HP,WASHC1,PGM5P2,WASH6P,DDX11L2,RP11-143M1.8,DDX11L8,FAM138F,MIR1302-9,PGM5P4-AS1,WASH2P,DDX11L9,DDX11L10,MIR1302-2HG,LLNLR-222A1.1,DDX11L1,MIR6859-4,PGM5P3-AS1,PGM5P4,
../firstrun/newGeneCopies/CAPRIN2/CAPRIN2_partitions/CAPRIN2_group1.fasta	../firstrun/newGeneCopies/CAPRIN2/CAPRIN2_partitions/CAPRIN2_group1_CAPRIN2OOOLINC00941OOORP11-77I22v2.fasta	RP11-77I22.2,LINC00941,CAPRIN2,
../firstrun/newGeneCopies/ZNF799/ZNF799_partitions/ZNF799_group3.fasta	../firstrun/newGeneCopies/ZNF799/ZNF799_partitions/ZNF799_group3_ZNF799OOOCTD-3105H18v14OOOCTD-3105H18v16.fasta	CTD-3105H18.4,CTD-3105H18.16,ZNF799,CTD-3105H18.18,CTD-3105H18.14,ZNF443,
../firstrun/newGeneCopies/CFAP126/CFAP126_partitions/CFAP126_group1.fasta	../firstrun/newGeneCopies/CFAP126/CFAP126_partitions/CFAP126_group1_CFAP126OOORP11-122G18v14OOOSDHC.fasta	SDHC,CFAP126,RP11-122G18.14,
../firstrun/newGeneCopies/IFITM3/IFITM3_partitions/IFITM3_group8.fasta	../firstrun/newGeneCopies/IFITM3/IFITM3_partitions/IFITM3_group8_IFITM3OOOAC136475v7OOOAC136475v8.fasta	AC136475.8,IFITM2,RP11-326C3.12,AC136475.7,RP11-326C3.11,RP11-326C3.10,IFITM3,RP11-326C3.17,RP11-326C3.7,IFITM1,
../firstrun/newGeneCopies/VPS16/VPS16_partitions/VPS16_group1.fasta	../firstrun/newGeneCopies/VPS16/VPS16_partitions/VPS16_group1_VPS16OOOPCED1A.fasta	VPS16,PCED1A,
../firstrun/newGeneCopies/CLPB/CLPB_partitions/CLPB_group1.fasta	../firstrun/newGeneCopies/CLPB/CLPB_partitions/CLPB_group1_CLPBOOOAP000593v7OOOCMB9-4J8v1.fasta	RP11-45F15.2,AP000593.7,RP11-45F15.1,CMB9-4J8.1,CLPB,
../firstrun/newGeneCopies/CLPB/CLPB_partitions/CLPB_group3.fasta	../firstrun/newGeneCopies/CLPB/CLPB_partitions/CLPB_group3_CLPBOOORP11-7N14v1.fasta	CLPB,RP11-7N14.1,
../firstrun/newGeneCopies/POU4F1/POU4F1_partitions/POU4F1_group1.fasta	../firstrun/newGeneCopies/POU4F1/POU4F1_partitions/POU4F1_group1_POU4F1OOOOBI1-AS1OOORP11-52L5v6.fasta	POU4F1,OBI1-AS1,RP11-52L5.6,
../firstrun/newGeneCopies/ZC3H11B/ZC3H11B_partitions/ZC3H11B_group2.fasta	../firstrun/newGeneCopies/ZC3H11B/ZC3H11B_partitions/ZC3H11B_group2_ZC3H11BOOOEYSOOORP11-74E24v2.fasta	ZC3H11B,ZC3H11A,RP11-74E24.2,EYS,ZBED6,
../firstrun/newGeneCopies/CTAGE6/CTAGE6_partitions/CTAGE6_group2.fasta	../firstrun/newGeneCopies/CTAGE6/CTAGE6_partitions/CTAGE6_group2_CTAGE6OOOAC073264v6OOOARHGEF34P.fasta	AC073264.6,ENSG00000285408,ARHGEF35-AS1,CTAGE15,ENSG00000284912,CTAGE9,RNU6-162P,CTAGE6,RP11-61L23.2,ARHGEF35,OR2A7,CTAGE4,CTAGE8,ARHGEF34P,OR2AO1P,RNU6-267P,ENPP3,RP4-798C17.7,
../firstrun/newGeneCopies/TEPSIN/TEPSIN_partitions/TEPSIN_group1.fasta	../firstrun/newGeneCopies/TEPSIN/TEPSIN_partitions/TEPSIN_group1_TEPSINOOOAC027601v1OOONDUFAF8.fasta	TEPSIN,AC027601.1,NDUFAF8,
../firstrun/newGeneCopies/XAGE5/XAGE5_partitions/XAGE5_group1.fasta	../firstrun/newGeneCopies/XAGE5/XAGE5_partitions/XAGE5_group1_XAGE5OOORP11-485B17v3OOORP11-485B17v5.fasta	RP13-77O11.12,RP11-485B17.3,XAGE5,RP11-485B17.5,SPANXN5,RP13-77O11.11,
../firstrun/newGeneCopies/METTL26/METTL26_partitions/METTL26_group1.fasta	../firstrun/newGeneCopies/METTL26/METTL26_partitions/METTL26_group1_METTL26OOOMCRIP2OOORAB40C.fasta	MCRIP2,WFIKKN1,RAB40C,METTL26,
../firstrun/newGeneCopies/ANKS4B/ANKS4B_partitions/ANKS4B_group1.fasta	../firstrun/newGeneCopies/ANKS4B/ANKS4B_partitions/ANKS4B_group1_ANKS4BOOOCRYM.fasta	ANKS4B,CRYM,
../firstrun/newGeneCopies/CDC42/CDC42_partitions/CDC42_group37.fasta	../firstrun/newGeneCopies/CDC42/CDC42_partitions/CDC42_group37_CDC42EP1OOOLGALS2OOOMetazoa_SRP.fasta	Metazoa_SRP,CDC42EP1,LGALS2,
../firstrun/newGeneCopies/CDC42/CDC42_partitions/CDC42_group2.fasta	../firstrun/newGeneCopies/CDC42/CDC42_partitions/CDC42_group2_CDC42SE1OOOBNIPLOOOC1orf56.fasta	BNIPL,C1orf56,CDC42SE1,MLLT11,GABPB2,
../firstrun/newGeneCopies/USP51/USP51_partitions/USP51_group1.fasta	../firstrun/newGeneCopies/USP51/USP51_partitions/USP51_group1_USP51.fasta	USP51,
../firstrun/newGeneCopies/EDC4/EDC4_partitions/EDC4_group1.fasta	../firstrun/newGeneCopies/EDC4/EDC4_partitions/EDC4_group1_EDC4OOOCTC-479C5v10OOONRN1L.fasta	EDC4,CTC-479C5.10,NRN1L,NUTF2,
../firstrun/newGeneCopies/FCGBP/FCGBP_partitions/FCGBP_group1.fasta	../firstrun/newGeneCopies/FCGBP/FCGBP_partitions/FCGBP_group1_FCGBP.fasta	FCGBP,
../firstrun/newGeneCopies/AMIGO1/AMIGO1_partitions/AMIGO1_group1.fasta	../firstrun/newGeneCopies/AMIGO1/AMIGO1_partitions/AMIGO1_group1_AMIGO1OOOCYB561D1.fasta	CYB561D1,AMIGO1,
../firstrun/newGeneCopies/FMC1/FMC1_partitions/FMC1_group1.fasta	../firstrun/newGeneCopies/FMC1/FMC1_partitions/FMC1_group1_FMC1OOOFMC1-LUC7L2OOOLUC7L2.fasta	LUC7L2,FMC1,RP11-634H22.1,FMC1-LUC7L2,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group61.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group61_CNTNAP2.fasta	CNTNAP2,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group60.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group60_CNTNAP2.fasta	CNTNAP2,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group63.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group63_CNTNAP2.fasta	CNTNAP2,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group54.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group54_CNTNAP2OOOAC005518v2OOORNA5SP249.fasta	AC005518.2,RP4-777G9.1,RNA5SP249,CNTNAP2,RNU6-1184P,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group62.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group62_CNTNAP2.fasta	CNTNAP2,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group59.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group59_CNTNAP2.fasta	CNTNAP2,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group65.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group65_CNTNAP2.fasta	CNTNAP2,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group52.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group52_CNTNAP2OOOMIR548F4.fasta	MIR548F4,CNTNAP2,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group46.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group46_CNTNAP2OOOENSG10010138246v1OOOY_RNA.fasta	Y_RNA,CNTNAP2,ENSG10010138246.1,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group50.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group50_CNTNAP2.fasta	CNTNAP2,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group66.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group66_CNTNAP2OOOU3.fasta	U3,CNTNAP2,
../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group51.fasta	../firstrun/newGeneCopies/CNTNAP2/CNTNAP2_partitions/CNTNAP2_group51_CNTNAP2OOOCNTNAP2-AS1OOODUTP3.fasta	DUTP3,CNTNAP2,RANP2,CNTNAP2-AS1,
../firstrun/newGeneCopies/SAMM50/SAMM50_partitions/SAMM50_group113.fasta	../firstrun/newGeneCopies/SAMM50/SAMM50_partitions/SAMM50_group113_SAMM50OOOPARVBOOOPNPLA3.fasta	RPL35AP36,PARVB,SAMM50,PNPLA3,
../firstrun/newGeneCopies/FN3K/FN3K_partitions/FN3K_group28.fasta	../firstrun/newGeneCopies/FN3K/FN3K_partitions/FN3K_group28_FN3KOOOFN3KRPOOORP11-388C12v1.fasta	RP11-388C12.8,RP11-388C12.1,FN3KRP,FN3K,TBCD,RP11-388C12.5,
../firstrun/newGeneCopies/GADD45B/GADD45B_partitions/GADD45B_group1.fasta	../firstrun/newGeneCopies/GADD45B/GADD45B_partitions/GADD45B_group1_GADD45B.fasta	GADD45B,
../firstrun/newGeneCopies/GFPT1/GFPT1_partitions/GFPT1_group1.fasta	../firstrun/newGeneCopies/GFPT1/GFPT1_partitions/GFPT1_group1_GFPT1OOOY_RNA.fasta	GFPT1,Y_RNA,
../firstrun/newGeneCopies/PLCH2/PLCH2_partitions/PLCH2_group1.fasta	../firstrun/newGeneCopies/PLCH2/PLCH2_partitions/PLCH2_group1_PLCH2OOORP3-395M20v2OOORP3-395M20v3.fasta	RP3-395M20.2,PLCH2,RP3-395M20.3,
../firstrun/newGeneCopies/ZNF627/ZNF627_partitions/ZNF627_group1.fasta	../firstrun/newGeneCopies/ZNF627/ZNF627_partitions/ZNF627_group1_ZNF627OOOACP5OOOELOF1.fasta	ELOF1,ACP5,GAPDHP76,ZNF627,
../firstrun/newGeneCopies/TMEM131/TMEM131_partitions/TMEM131_group2.fasta	../firstrun/newGeneCopies/TMEM131/TMEM131_partitions/TMEM131_group2_TMEM131OOOHMGN1P36OOORNU7-96P.fasta	RNU7-96P,HMGN1P36,TMEM131,
../firstrun/newGeneCopies/BHLHA9/BHLHA9_partitions/BHLHA9_group1.fasta	../firstrun/newGeneCopies/BHLHA9/BHLHA9_partitions/BHLHA9_group1_BHLHA9.fasta	BHLHA9,
../firstrun/newGeneCopies/ETFB/ETFB_partitions/ETFB_group1.fasta	../firstrun/newGeneCopies/ETFB/ETFB_partitions/ETFB_group1_ETFBOOOCLDND2OOOCTD-2616J11v10.fasta	CTD-2616J11.11,CTD-2616J11.9,VSIG10L-AS1,CLDND2,ETFB,CTD-2616J11.10,
../firstrun/newGeneCopies/TIGD7/TIGD7_partitions/TIGD7_group1.fasta	../firstrun/newGeneCopies/TIGD7/TIGD7_partitions/TIGD7_group1_TIGD7OOOAC004232v1OOOLA16c-360H6v3.fasta	AC004232.1,ZNF263,TIGD7,LA16c-360H6.3,ZNF75A,
../firstrun/newGeneCopies/POGZ/POGZ_partitions/POGZ_group1.fasta	../firstrun/newGeneCopies/POGZ/POGZ_partitions/POGZ_group1_POGZOOOPSMB4OOORNY4P25.fasta	PSMB4,RNY4P25,POGZ,
../firstrun/newGeneCopies/RP11-849H4.2/RP11-849H4.2_partitions/RP11-849H4.2_group0011206.fasta	../firstrun/newGeneCopies/RP11-849H4.2/RP11-849H4.2_partitions/RP11-849H4.2_group0011206_RP11-849H4v2OOODEFB130COOODEFB131B.fasta	DEFB131B,OR7E128P,DEFB130C,OR7E126P,RP11-849H4.2,RNF121,
../firstrun/newGeneCopies/SNRNP40/SNRNP40_partitions/SNRNP40_group1.fasta	../firstrun/newGeneCopies/SNRNP40/SNRNP40_partitions/SNRNP40_group1_SNRNP40OOORP11-490K7v4OOOZCCHC17.fasta	RP11-490K7.4,ZCCHC17,SNRNP40,
../firstrun/newGeneCopies/PDE4DIP/PDE4DIP_partitions/PDE4DIP_group00343401.fasta	../firstrun/newGeneCopies/PDE4DIP/PDE4DIP_partitions/PDE4DIP_group00343401_PDE4DIPOOOPDE4DIPP1OOOPDE4DIPP10.fasta	ESPNP,PDE4DIPP10,CH17-472G23.1,PDE4DIPP5,RP4-791M13.3,RP4-791M13.5,WI2-1896O14.1,RP11-293F5.1,PDE4DIPP8,CH17-189H20.1,RP11-325P15.1,RP11-744H18.1,RP4-704D21.2,RP11-326G21.1,CH17-262O2.2,RNVU1-6,PDE4DIPP9,MIR3675,RP11-108M9.1,RNU1-6P,PDE4DIPP2,CH17-353B19.2,RNU2-38P,CROCC,ENSG00000268674,LINC01783,RP4-791M13.4,ENSG00000277475,CH17-472G23.2,RP11-108M9.3,U1,RNU1-5P,EIF1AXP1,PDE4DIPP1,CH17-112A12.2,PDE4DIP,RP5-875O13.7,U2,LINC01719,
../firstrun/newGeneCopies/ATP10/ATP10_partitions/ATP10_group9.fasta	../firstrun/newGeneCopies/ATP10/ATP10_partitions/ATP10_group9_ATP10A.fasta	ATP10A,
../firstrun/newGeneCopies/ATP10/ATP10_partitions/ATP10_group10.fasta	../firstrun/newGeneCopies/ATP10/ATP10_partitions/ATP10_group10_ATP10AOOORP11-2C7v1.fasta	RP11-2C7.1,ATP10A,
../firstrun/newGeneCopies/ATP10/ATP10_partitions/ATP10_group8.fasta	../firstrun/newGeneCopies/ATP10/ATP10_partitions/ATP10_group8_ATP10AOOOAC023449v2OOORNA5SP390.fasta	RNA5SP390,AC023449.2,ATP10A,
../firstrun/newGeneCopies/TTC37/TTC37_partitions/TTC37_group1.fasta	../firstrun/newGeneCopies/TTC37/TTC37_partitions/TTC37_group1_TTC37OOOARSKOOORNU6-308P.fasta	RNU6-308P,ARSK,TTC37,
../firstrun/newGeneCopies/BPY2/BPY2_partitions/BPY2_group2.fasta	../firstrun/newGeneCopies/BPY2/BPY2_partitions/BPY2_group2_BPY2OOOBPY2BOOOBPY2C.fasta	TTTY4C,BPY2C,BPY2B,TTTY4,BPY2,TTTY4B,
../firstrun/newGeneCopies/ANKRD11/ANKRD11_partitions/ANKRD11_group3.fasta	../firstrun/newGeneCopies/ANKRD11/ANKRD11_partitions/ANKRD11_group3_ANKRD11OOOANKRD11P2OOOAC137932v4.fasta	RP11-104N10.1,AC137932.5,GS2-740I5.1,AC137932.4,RP1-168P16.1,RNU6-430P,SPG7,AC137932.6,RP1-168P16.3,RP1-168P16.4,ANKRD11,ANKRD11P2,
../firstrun/newGeneCopies/ANKRD39/ANKRD39_partitions/ANKRD39_group1.fasta	../firstrun/newGeneCopies/ANKRD39/ANKRD39_partitions/ANKRD39_group1_ANKRD39OOOANKRD23OOOCNNM3.fasta	CNNM3,ANKRD23,ANKRD39,SEMA4C,
../firstrun/newGeneCopies/IGHA2/IGHA2_partitions/IGHA2_group1.fasta	../firstrun/newGeneCopies/IGHA2/IGHA2_partitions/IGHA2_group1_IGHA2OOOAL928768v3OOOIGHA1.fasta	IGHA2,AL928768.3,IGHA1,
../firstrun/newGeneCopies/ERF/ERF_partitions/ERF_group3.fasta	../firstrun/newGeneCopies/ERF/ERF_partitions/ERF_group3_ERFOOOAC006486v10OOOAC006486v9.fasta	AC006486.10,ERF,AC006486.9,
../firstrun/newGeneCopies/FOXN1/FOXN1_partitions/FOXN1_group1.fasta	../firstrun/newGeneCopies/FOXN1/FOXN1_partitions/FOXN1_group1_FOXN1OOORP11-192H23v4.fasta	RP11-192H23.4,FOXN1,
../firstrun/newGeneCopies/CFAP74/CFAP74_partitions/CFAP74_group1.fasta	../firstrun/newGeneCopies/CFAP74/CFAP74_partitions/CFAP74_group1_CFAP74OOOCALML6OOOTMEM52.fasta	CALML6,CFAP74,TMEM52,
../firstrun/newGeneCopies/APOB/APOB_partitions/APOB_group9.fasta	../firstrun/newGeneCopies/APOB/APOB_partitions/APOB_group9_APOBOOOAC010872v1OOORP11-116D2v1.fasta	APOB,RP11-116D2.1,AC010872.1,
../firstrun/newGeneCopies/APOB/APOB_partitions/APOB_group34.fasta	../firstrun/newGeneCopies/APOB/APOB_partitions/APOB_group34_APOBEC3AOOOAPOBEC3BOOOAPOBEC3B-AS1.fasta	RP4-742C19.12,APOBEC3B-AS1,APOBEC3A,CTA-150C2.20,APOBEC3F,WI2-1043J20.1,APOBEC3B,APOBEC3C,APOBEC3D,APOBEC3H,CTA-150C2.22,APOBEC3G,
../firstrun/newGeneCopies/APOB/APOB_partitions/APOB_group29.fasta	../firstrun/newGeneCopies/APOB/APOB_partitions/APOB_group29_APOBROOOCLN3OOOIL27.fasta	RP11-435I10.4,IL27,CLN3,APOBR,RP11-231C14.10,
../firstrun/newGeneCopies/APOB/APOB_partitions/APOB_group26.fasta	../firstrun/newGeneCopies/APOB/APOB_partitions/APOB_group26_APOBEC1OOORP11-444J21v7.fasta	APOBEC1,RP11-444J21.7,
../firstrun/newGeneCopies/APOC/APOC_partitions/APOC_group5.fasta	../firstrun/newGeneCopies/APOC/APOC_partitions/APOC_group5_APOC1OOOAPOC1P1OOOAPOC2.fasta	APOC4-APOC2,APOC1,CTB-129P6.7,APOC1P1,APOC4,APOC2,CTB-129P6.11,
../firstrun/newGeneCopies/EPN1/EPN1_partitions/EPN1_group1.fasta	../firstrun/newGeneCopies/EPN1/EPN1_partitions/EPN1_group1_EPN1OOOAC010525v4OOOAC010525v5.fasta	EPN1,NLRP9,CTD-2537I9.12,U2AF2,CTD-2611O12.6,AC010525.4,AC010525.5,
../firstrun/newGeneCopies/CGN/CGN_partitions/CGN_group1.fasta	../firstrun/newGeneCopies/CGN/CGN_partitions/CGN_group1_CGNOOOENSG10010136469v1OOORP11-74C1v4.fasta	ENSG10010136469.1,RP11-74C1.4,CGN,TUFT1,
../firstrun/newGeneCopies/HLA-Z/HLA-Z_partitions/HLA-Z_group1.fasta	../firstrun/newGeneCopies/HLA-Z/HLA-Z_partitions/HLA-Z_group1_HLA-Z.fasta	HLA-Z,
../firstrun/newGeneCopies/CNIH2/CNIH2_partitions/CNIH2_group3.fasta	../firstrun/newGeneCopies/CNIH2/CNIH2_partitions/CNIH2_group3_CNIH2OOORAB1BOOORP11-867G23v3.fasta	RP11-867G23.4,CNIH2,RP11-867G23.3,YIF1A,RAB1B,
../firstrun/newGeneCopies/H2AC21/H2AC21_partitions/H2AC21_group2.fasta	../firstrun/newGeneCopies/H2AC21/H2AC21_partitions/H2AC21_group2_H2AC21OOOBOLA1OOOH2AC20.fasta	BOLA1,H2BC21,H2AC21,H2AC20,
../firstrun/newGeneCopies/ANKRD30BL/ANKRD30BL_partitions/ANKRD30BL_group7.fasta	../firstrun/newGeneCopies/ANKRD30BL/ANKRD30BL_partitions/ANKRD30BL_group7_ANKRD30BLOOO5_8S_rRNAOOOABC7-42418200C9v1.fasta	BMS1P10,MIR663B,RP11-79C23.1,RNU6-721P,U6,5_8S_rRNA,RNU6-1293P,AC129778.2,LA16c-60D12.1,ENSG00000288319,RP11-318K12.1,RNU6-458P,AP001464.4,ANKRD30BL,RNU6-1132P,BMS1P14,RNA5-8SP5,RNU6-614P,RP11-318K12.2,RP11-754I20.1,AP005901.1,RNU6-156P,ANKRD30BP2,ABC7-42418200C9.1,AC125634.1,RNU6-978P,
../firstrun/newGeneCopies/SLC38A10/SLC38A10_partitions/SLC38A10_group1.fasta	../firstrun/newGeneCopies/SLC38A10/SLC38A10_partitions/SLC38A10_group1_SLC38A10OOORP11-455O6v5OOORP11-455O6v8.fasta	SLC38A10,RP11-455O6.5,RP11-455O6.8,
../firstrun/newGeneCopies/CBWD/CBWD_partitions/CBWD_group1.fasta	../firstrun/newGeneCopies/CBWD/CBWD_partitions/CBWD_group1_CBWD1OOOCBWD2OOOCBWD3.fasta	CBWD1,FOXD4L5,FOXD4L3,CBWD2,FRG1HP,FOXD4L1,RP11-561O23.8,FOXD4,CBWD3,FOXD4L6,RP11-561O23.9,CBWD5,FOXD4L4,AC016745.3,CBWD6,BX255923.2,CBWD4P,RP11-480C16.1,
../firstrun/newGeneCopies/SETDB1/SETDB1_partitions/SETDB1_group1.fasta	../firstrun/newGeneCopies/SETDB1/SETDB1_partitions/SETDB1_group1_SETDB1OOOCERS2OOORP11-316M1v12.fasta	RP11-316M1.12,SETDB1,CERS2,
../firstrun/newGeneCopies/BCL2L1/BCL2L1_partitions/BCL2L1_group1.fasta	../firstrun/newGeneCopies/BCL2L1/BCL2L1_partitions/BCL2L1_group1_BCL2L1OOOBCL2L1-AS1OOOABALON.fasta	BCL2L1-AS1,ABALON,BCL2L1,
../firstrun/newGeneCopies/FAM25/FAM25_partitions/FAM25_group1.fasta	../firstrun/newGeneCopies/FAM25/FAM25_partitions/FAM25_group1_FAM25AOOOFAM25BPOOOFAM25C.fasta	ENSG00000288244,FAM25A,FAM25G,CH17-335B8.4,ANXA8L1,RP11-175I17.6,SLC9A3P3,ICI-14BB7.1,SYNPO2L,CH17-360D5.2,FAM25BP,RP11-96C23.12,FAM25C,RP11-96C23.14,FAM21EP,RP11-144G6.13,ANXA8,RP11-96C23.10,TIMM23B-AGAP6,SYNPO2L-AS1,RP11-144G6.4,FAM25E,AGAP6,
../firstrun/newGeneCopies/CXorf51/CXorf51_partitions/CXorf51_group1.fasta	../firstrun/newGeneCopies/CXorf51/CXorf51_partitions/CXorf51_group1_CXorf51AOOOCXorf51B.fasta	CXorf51B,CXorf51A,
../firstrun/newGeneCopies/SPRR2D/SPRR2D_partitions/SPRR2D_group1.fasta	../firstrun/newGeneCopies/SPRR2D/SPRR2D_partitions/SPRR2D_group1_SPRR2D.fasta	SPRR2D,
../firstrun/newGeneCopies/MAPK3/MAPK3_partitions/MAPK3_group1.fasta	../firstrun/newGeneCopies/MAPK3/MAPK3_partitions/MAPK3_group1_MAPK3OOOGDPD3OOORP11-455F5v6.fasta	RP11-455F5.6,MAPK3,GDPD3,
../firstrun/newGeneCopies/HSPA1/HSPA1_partitions/HSPA1_group1.fasta	../firstrun/newGeneCopies/HSPA1/HSPA1_partitions/HSPA1_group1_HSPA1AOOOHSPA1BOOOHSPA1L.fasta	HSPA1B,HSPA1A,HSPA1L,LSM2,XXbac-BPG254B15.11,
../firstrun/newGeneCopies/NEU1/NEU1_partitions/NEU1_group1.fasta	../firstrun/newGeneCopies/NEU1/NEU1_partitions/NEU1_group1_NEU1OOOCYP21A2OOOSLC44A4.fasta	SLC44A4,CYP21A2,NEU1,
../firstrun/newGeneCopies/GSX1/GSX1_partitions/GSX1_group1.fasta	../firstrun/newGeneCopies/GSX1/GSX1_partitions/GSX1_group1_GSX1.fasta	GSX1,
../firstrun/newGeneCopies/HBA/HBA_partitions/HBA_group1.fasta	../firstrun/newGeneCopies/HBA/HBA_partitions/HBA_group1_HBA1OOOHBA2OOOHBAP1.fasta	HBM,HBAP1,HBA2,HBQ1,HBA1,Y_RNA,
../firstrun/newGeneCopies/KCNK6/KCNK6_partitions/KCNK6_group1.fasta	../firstrun/newGeneCopies/KCNK6/KCNK6_partitions/KCNK6_group1_KCNK6OOOYIF1B.fasta	YIF1B,KCNK6,
../firstrun/newGeneCopies/MYC/MYC_partitions/MYC_group6.fasta	../firstrun/newGeneCopies/MYC/MYC_partitions/MYC_group6_MYCOOOCASC11.fasta	CASC11,MYC,
../firstrun/newGeneCopies/PARD/PARD_partitions/PARD_group23.fasta	../firstrun/newGeneCopies/PARD/PARD_partitions/PARD_group23_PARD6AOOOACDOOOC16orf86.fasta	ENKD1,ACD,CARMIL2,C16orf86,PARD6A,
../firstrun/newGeneCopies/ZSWIM9/ZSWIM9_partitions/ZSWIM9_group1.fasta	../firstrun/newGeneCopies/ZSWIM9/ZSWIM9_partitions/ZSWIM9_group1_ZSWIM9OOOCARD8OOOCTC-453G23v7.fasta	LIG1,CTC-453G23.7,ZSWIM9,CARD8,
../firstrun/newGeneCopies/GNG13/GNG13_partitions/GNG13_group1.fasta	../firstrun/newGeneCopies/GNG13/GNG13_partitions/GNG13_group1_GNG13OOOCHTF18.fasta	GNG13,CHTF18,
../firstrun/newGeneCopies/CRX/CRX_partitions/CRX_group1.fasta	../firstrun/newGeneCopies/CRX/CRX_partitions/CRX_group1_CRXOOOTPRX1.fasta	CRX,TPRX1,
../firstrun/newGeneCopies/LIX1L/LIX1L_partitions/LIX1L_group1.fasta	../firstrun/newGeneCopies/LIX1L/LIX1L_partitions/LIX1L_group1_LIX1LOOOLIX1L-AS1OOOANKRD34A.fasta	GNRHR2P1,LIX1L-AS1,RBM8A,CH17-270A2.2,C14orf39,CH17-270A2.1,RBM8B,LIX1L,GNRHR2,ANKRD34A,
../firstrun/newGeneCopies/H2BC18/H2BC18_partitions/H2BC18_group1.fasta	../firstrun/newGeneCopies/H2BC18/H2BC18_partitions/H2BC18_group1_H2BC18OOOFCGR1AOOOFCGR1B.fasta	H2BC18,H3P4,HIST2H3PS2,FCGR1B,RP11-439A17.4,H2BP2,RP5-998N21.7,H2BP1,HIST2H2BB,FCGR1A,RP11-439A17.9,FCGR1CP,RP11-439A17.10,RP11-196G18.3,H3-2,H3C13,
../firstrun/newGeneCopies/ALPG/ALPG_partitions/ALPG_group1.fasta	../firstrun/newGeneCopies/ALPG/ALPG_partitions/ALPG_group1_ALPGOOOAC068134v8OOOALPP.fasta	ECEL1P1,ALPG,ECEL1P2,AC068134.8,ALPP,
../firstrun/newGeneCopies/E2F4/E2F4_partitions/E2F4_group2.fasta	../firstrun/newGeneCopies/E2F4/E2F4_partitions/E2F4_group2_E2F4OOOELMO3OOOEXOC3L1.fasta	ELMO3,E2F4,MIR328,EXOC3L1,
../firstrun/newGeneCopies/PLIN5/PLIN5_partitions/PLIN5_group1.fasta	../firstrun/newGeneCopies/PLIN5/PLIN5_partitions/PLIN5_group1_PLIN5OOOCTB-50L17v14OOOLRG1.fasta	CTB-50L17.14,PLIN5,LRG1,
../firstrun/newGeneCopies/ENPP7/ENPP7_partitions/ENPP7_group383.fasta	../firstrun/newGeneCopies/ENPP7/ENPP7_partitions/ENPP7_group383_ENPP7OOOENPP7P13OOORP11-104C4v4.fasta	ENPP7,RP11-104C4.6,RP11-104C4.4,ENPP7P13,
../firstrun/newGeneCopies/TMEM184/TMEM184_partitions/TMEM184_group3.fasta	../firstrun/newGeneCopies/TMEM184/TMEM184_partitions/TMEM184_group3_TMEM184AOOOMAFK.fasta	TMEM184A,MAFK,
../firstrun/newGeneCopies/INPPL1/INPPL1_partitions/INPPL1_group1.fasta	../firstrun/newGeneCopies/INPPL1/INPPL1_partitions/INPPL1_group1_INPPL1OOOFOLR2OOOPHOX2A.fasta	INPPL1,PHOX2A,FOLR2,
../firstrun/newGeneCopies/ITIH1/ITIH1_partitions/ITIH1_group1.fasta	../firstrun/newGeneCopies/ITIH1/ITIH1_partitions/ITIH1_group1_ITIH1OOOITIH3.fasta	ITIH1,ITIH3,
../firstrun/newGeneCopies/ENO3/ENO3_partitions/ENO3_group2.fasta	../firstrun/newGeneCopies/ENO3/ENO3_partitions/ENO3_group2_ENO3OOOPFN1OOORNF167.fasta	RNF167,SPAG7,ENO3,PFN1,
../firstrun/newGeneCopies/RSBN1L/RSBN1L_partitions/RSBN1L_group1.fasta	../firstrun/newGeneCopies/RSBN1L/RSBN1L_partitions/RSBN1L_group1_RSBN1LOOOAPTR.fasta	RSBN1L,APTR,
../firstrun/newGeneCopies/TRIM28/TRIM28_partitions/TRIM28_group1.fasta	../firstrun/newGeneCopies/TRIM28/TRIM28_partitions/TRIM28_group1_TRIM28OOOCHMP2AOOOMIR6807.fasta	TRIM28,ZBTB45,MIR6807,CHMP2A,RN7SL525P,
../firstrun/newGeneCopies/ANKRD18/ANKRD18_partitions/ANKRD18_group38.fasta	../firstrun/newGeneCopies/ANKRD18/ANKRD18_partitions/ANKRD18_group38_ANKRD18AOOOANKRD18BOOOANKRD18CP.fasta	ANKRD18A,RP11-392E22.11,ANKRD18B,RP11-526D8.13,ANKRD18DP,ANKRD18CP,FAM95C,RP11-526D8.7,RNU6-714P,RP11-498P14.4,RP11-526D8.12,SNX18P2,CTSV,ZNF322,ANKRD19P,FAM201A,ZNF322P1,RP11-255A11.4,RP11-498P14.3,RNU6-798P,RP11-498P14.5,RNU6-821P,
../firstrun/newGeneCopies/MUC12/MUC12_partitions/MUC12_group1.fasta	../firstrun/newGeneCopies/MUC12/MUC12_partitions/MUC12_group1_MUC12OOOMUC12-AS1OOOMUC17.fasta	MUC3A,MUC12-AS1,MUC17,RP11-395B7.2,MUC12,
../firstrun/newGeneCopies/SPATA33/SPATA33_partitions/SPATA33_group1.fasta	../firstrun/newGeneCopies/SPATA33/SPATA33_partitions/SPATA33_group1_SPATA33OOOCHMP1AOOORP11-368I7v6.fasta	RP11-368I7.6,CHMP1A,SPATA33,
../firstrun/newGeneCopies/SEC61A1/SEC61A1_partitions/SEC61A1_group1.fasta	../firstrun/newGeneCopies/SEC61A1/SEC61A1_partitions/SEC61A1_group1_SEC61A1OOOMGLLOOORUVBL1.fasta	MGLL,RUVBL1,SEC61A1,
../firstrun/newGeneCopies/SLC9A/SLC9A_partitions/SLC9A_group85.fasta	../firstrun/newGeneCopies/SLC9A/SLC9A_partitions/SLC9A_group85_SLC9A6OOOMMGT1.fasta	SLC9A6,MMGT1,
../firstrun/newGeneCopies/SLC9A/SLC9A_partitions/SLC9A_group36.fasta	../firstrun/newGeneCopies/SLC9A/SLC9A_partitions/SLC9A_group36_SLC9A5OOOCTC-277H1v7OOOFHOD1.fasta	SLC9A5,FHOD1,CTC-277H1.7,
../firstrun/newGeneCopies/LCAT/LCAT_partitions/LCAT_group1.fasta	../firstrun/newGeneCopies/LCAT/LCAT_partitions/LCAT_group1_LCATOOOCTC-479C5v12OOOPSMB10.fasta	CTC-479C5.12,LCAT,PSMB10,SLC12A4,
../firstrun/newGeneCopies/ARHGAP11/ARHGAP11_partitions/ARHGAP11_group1.fasta	../firstrun/newGeneCopies/ARHGAP11/ARHGAP11_partitions/ARHGAP11_group1_ARHGAP11AOOOARHGAP11BOOOAC091057v4.fasta	RP11-736I24.3,U8,ULK4P1,ARHGAP11B,Y_RNA,ENSG00000282168,CHRFAM7A,RP11-382B18.3,RP11-932O9.7,ULK4P3,OTUD7A,RP11-1000B6.5,RP11-1000B6.9,RP11-1000B6.8,SCG5,RP11-736I24.5,AC091057.4,ULK4P2,ARHGAP11A,RP5-1086D14.6,RP13-395E19.3,
../firstrun/newGeneCopies/SPOCD1/SPOCD1_partitions/SPOCD1_group1.fasta	../firstrun/newGeneCopies/SPOCD1/SPOCD1_partitions/SPOCD1_group1_SPOCD1OOORP11-84A19v3.fasta	RP11-84A19.3,SPOCD1,
../firstrun/newGeneCopies/RBFOX3/RBFOX3_partitions/RBFOX3_group5.fasta	../firstrun/newGeneCopies/RBFOX3/RBFOX3_partitions/RBFOX3_group5_RBFOX3.fasta	RBFOX3,
../firstrun/newGeneCopies/RBFOX3/RBFOX3_partitions/RBFOX3_group4.fasta	../firstrun/newGeneCopies/RBFOX3/RBFOX3_partitions/RBFOX3_group4_RBFOX3.fasta	RBFOX3,
../firstrun/newGeneCopies/RBFOX3/RBFOX3_partitions/RBFOX3_group1.fasta	../firstrun/newGeneCopies/RBFOX3/RBFOX3_partitions/RBFOX3_group1_RBFOX3OOOENGASEOOORP11-398J5v1.fasta	ENGASE,RBFOX3,RP11-398J5.1,
../firstrun/newGeneCopies/SMN/SMN_partitions/SMN_group1.fasta	../firstrun/newGeneCopies/SMN/SMN_partitions/SMN_group1_SMN1OOOSMN2OOOAC140134v2.fasta	RP11-846E15.5,SERF1A,SERF1B,CH17-133H2.1,CH17-64J14.7,SMN2,AC140134.2,RP11-974F13.3,SMN1,
../firstrun/newGeneCopies/NPAS4/NPAS4_partitions/NPAS4_group1.fasta	../firstrun/newGeneCopies/NPAS4/NPAS4_partitions/NPAS4_group1_NPAS4OOORP11-867G23v10.fasta	NPAS4,RP11-867G23.10,
../firstrun/newGeneCopies/SEC14L1/SEC14L1_partitions/SEC14L1_group3.fasta	../firstrun/newGeneCopies/SEC14L1/SEC14L1_partitions/SEC14L1_group3_SEC14L1.fasta	SEC14L1,
../firstrun/newGeneCopies/SEC14L1/SEC14L1_partitions/SEC14L1_group2.fasta	../firstrun/newGeneCopies/SEC14L1/SEC14L1_partitions/SEC14L1_group2_SEC14L1OOOMIR6516OOOSCARNA16.fasta	SCARNA16,SNHG20,SEC14L1,MIR6516,
../firstrun/newGeneCopies/SEC14L1/SEC14L1_partitions/SEC14L1_group4.fasta	../firstrun/newGeneCopies/SEC14L1/SEC14L1_partitions/SEC14L1_group4_SEC14L1OOOCYCSP40.fasta	CYCSP40,SEC14L1,
../firstrun/newGeneCopies/IFNL2/IFNL2_partitions/IFNL2_group1.fasta	../firstrun/newGeneCopies/IFNL2/IFNL2_partitions/IFNL2_group1_IFNL2OOOIFNL3OOOIFNL3P1.fasta	IFNL2,IFNL4P1,IFNL3P1,IFNL4,IFNL3,
../firstrun/newGeneCopies/RAB40B/RAB40B_partitions/RAB40B_group1.fasta	../firstrun/newGeneCopies/RAB40B/RAB40B_partitions/RAB40B_group1_RAB40BOOOMIR4525OOORP13-638C3v5.fasta	MIR4525,RP13-638C3.5,RAB40B,WDR45B,
../firstrun/newGeneCopies/EIF2AK3/EIF2AK3_partitions/EIF2AK3_group1.fasta	../firstrun/newGeneCopies/EIF2AK3/EIF2AK3_partitions/EIF2AK3_group1_EIF2AK3OOOEIF2AK3-DTOOOAC062029v1.fasta	RPIA,AC062029.1,EIF2AK3-DT,AC104134.2,EIF2AK3,
../firstrun/newGeneCopies/BFSP2/BFSP2_partitions/BFSP2_group3.fasta	../firstrun/newGeneCopies/BFSP2/BFSP2_partitions/BFSP2_group3_BFSP2OOOBFSP2-AS1OOORP11-503I22v2.fasta	BFSP2-AS1,BFSP2,TMEM108,RP11-503I22.2,
../firstrun/newGeneCopies/LAT/LAT_partitions/LAT_group7.fasta	../firstrun/newGeneCopies/LAT/LAT_partitions/LAT_group7_LATOOORP11-231C14v10OOORP11-264B17v3.fasta	SPNS1,RP11-231C14.10,RP11-264B17.3,LAT,RP11-264B17.5,
../firstrun/newGeneCopies/LAT/LAT_partitions/LAT_group2.fasta	../firstrun/newGeneCopies/LAT/LAT_partitions/LAT_group2_LAT2OOOEIF4HOOOEIF4HP1.fasta	RFC2,EIF4HP1,PSMC1P2,EIF4H,LAT2,
../firstrun/newGeneCopies/MAGEA9/MAGEA9_partitions/MAGEA9_group1.fasta	../firstrun/newGeneCopies/MAGEA9/MAGEA9_partitions/MAGEA9_group1_MAGEA9OOOMAGEA9B.fasta	MAGEA9,MAGEA9B,
../firstrun/newGeneCopies/ZNHIT3/ZNHIT3_partitions/ZNHIT3_group1.fasta	../firstrun/newGeneCopies/ZNHIT3/ZNHIT3_partitions/ZNHIT3_group1_ZNHIT3OOO5S_rRNAOOOMYO19.fasta	RNA5SP439,ZNHIT3,5S_rRNA,MYO19,
../firstrun/newGeneCopies/CHAMP1/CHAMP1_partitions/CHAMP1_group4.fasta	../firstrun/newGeneCopies/CHAMP1/CHAMP1_partitions/CHAMP1_group4_CHAMP1OOOLINC01054.fasta	CHAMP1,LINC01054,
../firstrun/newGeneCopies/RASGRP4/RASGRP4_partitions/RASGRP4_group1.fasta	../firstrun/newGeneCopies/RASGRP4/RASGRP4_partitions/RASGRP4_group1_RASGRP4OOOFAM98C.fasta	RASGRP4,FAM98C,
../firstrun/newGeneCopies/LAMB/LAMB_partitions/LAMB_group2.fasta	../firstrun/newGeneCopies/LAMB/LAMB_partitions/LAMB_group2_LAMB2OOOLAMB2P1OOOCCDC71.fasta	CCDC71,LAMB2,LAMB2P1,USP19,
../firstrun/newGeneCopies/LAMB/LAMB_partitions/LAMB_group3.fasta	../firstrun/newGeneCopies/LAMB/LAMB_partitions/LAMB_group3_LAMB1OOOCTB-13F3v1OOODLD.fasta	CTB-13F3.1,DLD,LAMB1,U3,
../firstrun/newGeneCopies/DDT/DDT_partitions/DDT_group2.fasta	../firstrun/newGeneCopies/DDT/DDT_partitions/DDT_group2_DDTOOODDTLOOOAP000351v3.fasta	CH17-476P10.1,AP000351.4,GSTT2B,GSTT2,DDT,AP000351.3,KB-1125A3.10,KB-226F1.2,DDTL,
../firstrun/newGeneCopies/HBB/HBB_partitions/HBB_group1.fasta	../firstrun/newGeneCopies/HBB/HBB_partitions/HBB_group1_HBBOOOHBBP1OOOBGLT3.fasta	CoTC_ribozyme,HBD,BGLT3,HBB,HBBP1,CTD-2643I7.6,
../firstrun/newGeneCopies/ACOT8/ACOT8_partitions/ACOT8_group1.fasta	../firstrun/newGeneCopies/ACOT8/ACOT8_partitions/ACOT8_group1_ACOT8OOOMetazoa_SRPOOOSNX21.fasta	ACOT8,Metazoa_SRP,ZSWIM3,SNX21,
../firstrun/newGeneCopies/ASPM/ASPM_partitions/ASPM_group1.fasta	../firstrun/newGeneCopies/ASPM/ASPM_partitions/ASPM_group1_ASPMOOOSEPTIN14P12.fasta	ASPM,SEPTIN14P12,
../firstrun/newGeneCopies/CIAO1/CIAO1_partitions/CIAO1_group1.fasta	../firstrun/newGeneCopies/CIAO1/CIAO1_partitions/CIAO1_group1_CIAO1OOOSNRNP200OOOTMEM127.fasta	SNRNP200,TMEM127,CIAO1,
../firstrun/newGeneCopies/TBXT/TBXT_partitions/TBXT_group1.fasta	../firstrun/newGeneCopies/TBXT/TBXT_partitions/TBXT_group1_TBXTOOOLNCDAT.fasta	TBXT,LNCDAT,
../firstrun/newGeneCopies/BTN1A1/BTN1A1_partitions/BTN1A1_group2.fasta	../firstrun/newGeneCopies/BTN1A1/BTN1A1_partitions/BTN1A1_group2_BTN1A1.fasta	BTN1A1,
../firstrun/newGeneCopies/CARD14/CARD14_partitions/CARD14_group1.fasta	../firstrun/newGeneCopies/CARD14/CARD14_partitions/CARD14_group1_CARD14OOORP11-334C17v5OOOSGSH.fasta	CARD14,RP11-334C17.5,SGSH,
../firstrun/newGeneCopies/ZNF768/ZNF768_partitions/ZNF768_group1.fasta	../firstrun/newGeneCopies/ZNF768/ZNF768_partitions/ZNF768_group1_ZNF768OOOAC002310v11OOOAC002310v14.fasta	AC002310.14,AC002310.11,ITGAL,ZNF747,ZNF768,
../firstrun/newGeneCopies/KCNK7/KCNK7_partitions/KCNK7_group1.fasta	../firstrun/newGeneCopies/KCNK7/KCNK7_partitions/KCNK7_group1_KCNK7OOOEHBP1L1OOOMAP3K11.fasta	MAP3K11,KCNK7,EHBP1L1,
../firstrun/newGeneCopies/FAM236B/FAM236B_partitions/FAM236B_group1.fasta	../firstrun/newGeneCopies/FAM236B/FAM236B_partitions/FAM236B_group1_FAM236BOOODMRTC1OOODMRTC1B.fasta	FAM226B,DMRTC1,FAM236B,DMRTC1B,FAM236A,
../firstrun/newGeneCopies/ORC6/ORC6_partitions/ORC6_group8.fasta	../firstrun/newGeneCopies/ORC6/ORC6_partitions/ORC6_group8_ORC6OOOVPS35.fasta	VPS35,ORC6,
../firstrun/newGeneCopies/KIR3DL2/KIR3DL2_partitions/KIR3DL2_group2.fasta	../firstrun/newGeneCopies/KIR3DL2/KIR3DL2_partitions/KIR3DL2_group2_KIR3DL2OOOCTB-61M7v1OOOENSG00000275583.fasta	GU182339.6,ENSG00000283722,RNU6-222P,GU182351.6,ENSG00000284169,KIR2DL4,ENSG00000283742,ENSG00000284555,ENSG00000283902,ENSG00000284301,KIR3DL3,ENSG00000284101,GU182360.3,GU182354.5,GU182338.2,KIR2DS3,GU182354.3,GU182352.4,GU182355.5,KIR2DS2,ENSG00000284053,ENSG00000288316,ENSG00000288650,ENSG00000288389,GU182352.6,GU182353.5,GU182357.5,ENSG00000284225,ENSG00000283716,KIR2DL2,ENSG00000275583,KIR3DL1,KIR3DP1,KIR2DL5B,KIR2DL5A,ENSG00000284580,KIR2DS5,KIR2DS4,U6,ENSG00000288381,GU182343.7,ENSG00000283763,ENSG00000288613,GU182358.3,KIR3DS1,GU182343.5,KIR3DL2,ENSG00000284033,ENSG00000284511,KIR2DS1,KIR2DP1,KIR2DL3,CTB-61M7.1,GU182347.12,GU182339.12,ENSG00000283784,GU182351.11,KIR2DL1,
../firstrun/newGeneCopies/TPO/TPO_partitions/TPO_group1.fasta	../firstrun/newGeneCopies/TPO/TPO_partitions/TPO_group1_TPOOOOAC141930v2.fasta	TPO,AC141930.2,
../firstrun/newGeneCopies/TPO/TPO_partitions/TPO_group4.fasta	../firstrun/newGeneCopies/TPO/TPO_partitions/TPO_group4_TPOOOOAC141930v2OOOAC144450v1.fasta	TPO,AC141930.2,AC144450.1,
../firstrun/newGeneCopies/CTAGE4/CTAGE4_partitions/CTAGE4_group2.fasta	../firstrun/newGeneCopies/CTAGE4/CTAGE4_partitions/CTAGE4_group2_CTAGE4OOOAC073264v6OOOARHGEF34P.fasta	ENSG00000284912,CTAGE15,RP4-798C17.7,ARHGEF5,ARHGEF35,ENPP3,ENSG00000285408,RNU6-267P,AC073264.6,CTAGE6,OR2A7,CTAGE9,ENSG00000288136,ARHGEF34P,ARHGEF35-AS1,CTAGE8,OR2A1-AS1,CTAGE4,RNU6-162P,
../firstrun/newGeneCopies/MMP23B/MMP23B_partitions/MMP23B_group1.fasta	../firstrun/newGeneCopies/MMP23B/MMP23B_partitions/MMP23B_group1_MMP23BOOOCDK11AOOOCDK11B.fasta	MIB2,MMP23A,RP1-283E3.8,CDK11B,CDK11A,MMP23B,
../firstrun/newGeneCopies/ETV7/ETV7_partitions/ETV7_group1.fasta	../firstrun/newGeneCopies/ETV7/ETV7_partitions/ETV7_group1_ETV7OOOETV7-AS1OOOPXT1.fasta	ETV7,PXT1,ETV7-AS1,
../firstrun/newGeneCopies/CNGA4/CNGA4_partitions/CNGA4_group1.fasta	../firstrun/newGeneCopies/CNGA4/CNGA4_partitions/CNGA4_group1_CNGA4OOOFAM160A2.fasta	CNGA4,FAM160A2,
../firstrun/newGeneCopies/CYP4A11/CYP4A11_partitions/CYP4A11_group1.fasta	../firstrun/newGeneCopies/CYP4A11/CYP4A11_partitions/CYP4A11_group1_CYP4A11OOOCYP4A22OOOCYP4A22-AS1.fasta	CYP4A22-AS1,CYP4A11,CYP4A22,
../firstrun/newGeneCopies/NMI/NMI_partitions/NMI_group1.fasta	../firstrun/newGeneCopies/NMI/NMI_partitions/NMI_group1_NMI.fasta	NMI,
../firstrun/newGeneCopies/RIF1/RIF1_partitions/RIF1_group1.fasta	../firstrun/newGeneCopies/RIF1/RIF1_partitions/RIF1_group1_RIF1OOONEB.fasta	RIF1,NEB,
../firstrun/newGeneCopies/SCNM1/SCNM1_partitions/SCNM1_group1.fasta	../firstrun/newGeneCopies/SCNM1/SCNM1_partitions/SCNM1_group1_SCNM1OOOLYSMD1OOOTMOD4.fasta	LYSMD1,SCNM1,TNFAIP8L2,TMOD4,
../firstrun/newGeneCopies/SSX7/SSX7_partitions/SSX7_group1.fasta	../firstrun/newGeneCopies/SSX7/SSX7_partitions/SSX7_group1_SSX7OOORP11-344N17v11OOORP11-344N17v3.fasta	RP11-552E4.2,SSXP3,RP11-344N17.9,SSX6P,SSX8P,SSXP1,SSX7,RP11-552J9.6,RP11-552E4.3,RP11-552J9.9,SSX4,SSX9P,SSXP4,SSX4B,SSX2,RP13-77O11.8,SSX3,SSX5,S100A11P6,RP11-344N17.11,RP11-552J9.12,SSX2B,RP11-344N17.6,RP11-344N17.3,SSX1,SSXP5,RP11-38O23.4,
../firstrun/newGeneCopies/STYXL1/STYXL1_partitions/STYXL1_group1.fasta	../firstrun/newGeneCopies/STYXL1/STYXL1_partitions/STYXL1_group1_STYXL1OOOMDH2OOORP11-229D13v3.fasta	TMEM120A,RP11-229D13.3,STYXL1,MDH2,
../firstrun/newGeneCopies/STEAP1B/STEAP1B_partitions/STEAP1B_group11.fasta	../firstrun/newGeneCopies/STEAP1B/STEAP1B_partitions/STEAP1B_group11_STEAP1BOOOAC004800v1OOODPY19L1P1.fasta	EEF1A1P6,DPY19L2P2,STEAP1,STEAP1B,AC004800.1,STEAP2-AS1,DPY19L1P1,
../firstrun/newGeneCopies/STEAP1B/STEAP1B_partitions/STEAP1B_group10.fasta	../firstrun/newGeneCopies/STEAP1B/STEAP1B_partitions/STEAP1B_group10_STEAP1B.fasta	STEAP1B,
../firstrun/newGeneCopies/STEAP1B/STEAP1B_partitions/STEAP1B_group13.fasta	../firstrun/newGeneCopies/STEAP1B/STEAP1B_partitions/STEAP1B_group13_STEAP1BOOOIL6OOOIL6-AS1.fasta	STEAP1B,IL6,IL6-AS1,
../firstrun/newGeneCopies/STEAP1B/STEAP1B_partitions/STEAP1B_group12.fasta	../firstrun/newGeneCopies/STEAP1B/STEAP1B_partitions/STEAP1B_group12_STEAP1BOOOAC002480v3.fasta	STEAP1B,AC002480.3,
../firstrun/newGeneCopies/TRMT1/TRMT1_partitions/TRMT1_group2.fasta	../firstrun/newGeneCopies/TRMT1/TRMT1_partitions/TRMT1_group2_TRMT1OOOLYL1OOONACC1.fasta	LYL1,TRMT1,NACC1,
../firstrun/newGeneCopies/HLA-T/HLA-T_partitions/HLA-T_group1.fasta	../firstrun/newGeneCopies/HLA-T/HLA-T_partitions/HLA-T_group1_HLA-TOOOHLA-AOOOHLA-H.fasta	HLA-T,HLA-H,HLA-A,
../firstrun/newGeneCopies/THBS2/THBS2_partitions/THBS2_group1.fasta	../firstrun/newGeneCopies/THBS2/THBS2_partitions/THBS2_group1_THBS2OOOXXyac-YX65C7_Av2.fasta	THBS2,XXyac-YX65C7_A.2,
../firstrun/newGeneCopies/AGPAT4/AGPAT4_partitions/AGPAT4_group2.fasta	../firstrun/newGeneCopies/AGPAT4/AGPAT4_partitions/AGPAT4_group2_AGPAT4.fasta	AGPAT4,
../firstrun/newGeneCopies/AGPAT4/AGPAT4_partitions/AGPAT4_group1.fasta	../firstrun/newGeneCopies/AGPAT4/AGPAT4_partitions/AGPAT4_group1_AGPAT4OOOAGPAT4-IT1.fasta	AGPAT4,AGPAT4-IT1,
../firstrun/newGeneCopies/GCNT7/GCNT7_partitions/GCNT7_group1.fasta	../firstrun/newGeneCopies/GCNT7/GCNT7_partitions/GCNT7_group1_GCNT7OOOFAM209AOOOFAM209B.fasta	RP5-1153D9.5,RTF2,GCNT7,FAM209A,FAM209B,
../firstrun/newGeneCopies/SLC35E2B/SLC35E2B_partitions/SLC35E2B_group1.fasta	../firstrun/newGeneCopies/SLC35E2B/SLC35E2B_partitions/SLC35E2B_group1_SLC35E2BOOOCDK11AOOOCDK11B.fasta	SLC35E2A,RP1-283E3.4,CDK11B,RP1-283E3.8,CDK11A,SLC35E2B,RP11-345P4.10,RP11-345P4.6,
../firstrun/newGeneCopies/AGRN/AGRN_partitions/AGRN_group1.fasta	../firstrun/newGeneCopies/AGRN/AGRN_partitions/AGRN_group1_AGRNOOORP11-54O7v14.fasta	AGRN,RP11-54O7.14,
../firstrun/newGeneCopies/RAD51AP1/RAD51AP1_partitions/RAD51AP1_group2.fasta	../firstrun/newGeneCopies/RAD51AP1/RAD51AP1_partitions/RAD51AP1_group2_RAD51AP1OOOC12orf4OOODYRK4.fasta	DYRK4,C12orf4,RAD51AP1,
../firstrun/newGeneCopies/FKBP9/FKBP9_partitions/FKBP9_group1.fasta	../firstrun/newGeneCopies/FKBP9/FKBP9_partitions/FKBP9_group1_FKBP9OOOFKBP9P1OOORNU6-388P.fasta	RNU6-388P,RP11-310H4.6,FKBP9P1,FKBP9,RNU6-389P,
../firstrun/newGeneCopies/FAM178/FAM178_partitions/FAM178_group1.fasta	../firstrun/newGeneCopies/FAM178/FAM178_partitions/FAM178_group1_FAM178BOOOMetazoa_SRPOOORNA5SP101.fasta	RP11-353K11.2,FAM178B,RNA5SP101,Metazoa_SRP,
../firstrun/newGeneCopies/ACTR3C/ACTR3C_partitions/ACTR3C_group1.fasta	../firstrun/newGeneCopies/ACTR3C/ACTR3C_partitions/ACTR3C_group1_ACTR3COOOACTR3BOOOLRRC61.fasta	LRRC61,RP4-622E21.1,ACTR3C,ZBED6CL,ACTR3B,
../firstrun/newGeneCopies/MPC1/MPC1_partitions/MPC1_group1.fasta	../firstrun/newGeneCopies/MPC1/MPC1_partitions/MPC1_group1_MPC1OOOMPC1-DT.fasta	MPC1-DT,MPC1,
../firstrun/newGeneCopies/ALAS1/ALAS1_partitions/ALAS1_group1.fasta	../firstrun/newGeneCopies/ALAS1/ALAS1_partitions/ALAS1_group1_ALAS1OOORP11-330H6v6.fasta	ALAS1,RP11-330H6.6,
../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group7.fasta	../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group7_AKT3OOORP11-351N5v2.fasta	RP11-351N5.2,AKT3,
../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group6.fasta	../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group6_AKT3OOOAKT3-IT1.fasta	AKT3-IT1,AKT3,
../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group5.fasta	../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group5_AKT3OOORP11-370K11v1.fasta	RP11-370K11.1,AKT3,
../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group4.fasta	../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group4_AKT3.fasta	AKT3,
../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group3.fasta	../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group3_AKT3.fasta	AKT3,
../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group1.fasta	../firstrun/newGeneCopies/AKT3/AKT3_partitions/AKT3_group1_AKT3OOORP11-269F20v1OOOSDCCAG8.fasta	SDCCAG8,AKT3,RP11-269F20.1,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group10.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group10_ANKS1BOOOAPAF1.fasta	APAF1,ANKS1B,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group11.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group11_ANKS1BOOORP11-90E9v1.fasta	ANKS1B,RP11-90E9.1,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group26.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group26_ANKS1BOOORP11-463C23v1.fasta	RP11-463C23.1,ANKS1B,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group12.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group12_ANKS1B.fasta	ANKS1B,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group25.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group25_ANKS1B.fasta	ANKS1B,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group13.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group13_ANKS1BOOORP11-473C19v1.fasta	RP11-473C19.1,ANKS1B,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group23.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group23_ANKS1B.fasta	ANKS1B,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group3.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group3_ANKS1AOOORP11-174N3v4OOORP11-527B17v3.fasta	ANKS1A,RP11-527B17.3,TAF11,RP11-174N3.4,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group15.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group15_ANKS1BOOORNA5SP366OOORP11-406H4v1.fasta	ANKS1B,RNA5SP366,RP11-406H4.1,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group19.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group19_ANKS1B.fasta	ANKS1B,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group22.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group22_ANKS1BOOOFAM71C.fasta	ANKS1B,FAM71C,
../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group20.fasta	../firstrun/newGeneCopies/ANKS1/ANKS1_partitions/ANKS1_group20_ANKS1B.fasta	ANKS1B,
../firstrun/newGeneCopies/ARL6IP4/ARL6IP4_partitions/ARL6IP4_group1.fasta	../firstrun/newGeneCopies/ARL6IP4/ARL6IP4_partitions/ARL6IP4_group1_ARL6IP4OOOABCB9OOOOGFOD2.fasta	ARL6IP4,OGFOD2,RP11-197N18.2,PITPNM2,ABCB9,
../firstrun/newGeneCopies/MPIG6B/MPIG6B_partitions/MPIG6B_group1.fasta	../firstrun/newGeneCopies/MPIG6B/MPIG6B_partitions/MPIG6B_group1_MPIG6BOOODDAH2OOOLY6G6C.fasta	LY6G6C,MPIG6B,DDAH2,LY6G6D,LY6G6F-LY6G6D,
../firstrun/newGeneCopies/AGPAT2/AGPAT2_partitions/AGPAT2_group1.fasta	../firstrun/newGeneCopies/AGPAT2/AGPAT2_partitions/AGPAT2_group1_AGPAT2OOOEGFL7OOOMIR126.fasta	EGFL7,MIR126,AGPAT2,
../firstrun/newGeneCopies/AGPAT5/AGPAT5_partitions/AGPAT5_group1.fasta	../firstrun/newGeneCopies/AGPAT5/AGPAT5_partitions/AGPAT5_group1_AGPAT5OOOMCPH1-AS1.fasta	AGPAT5,MCPH1-AS1,
../firstrun/newGeneCopies/AGPAT5/AGPAT5_partitions/AGPAT5_group2.fasta	../firstrun/newGeneCopies/AGPAT5/AGPAT5_partitions/AGPAT5_group2_AGPAT5OOOMIR4659AOOOMIR4659B.fasta	MIR4659B,AGPAT5,MIR4659A,
../firstrun/newGeneCopies/PSAPL1/PSAPL1_partitions/PSAPL1_group1.fasta	../firstrun/newGeneCopies/PSAPL1/PSAPL1_partitions/PSAPL1_group1_PSAPL1OOOSORCS2.fasta	PSAPL1,SORCS2,
../firstrun/newGeneCopies/AARS1/AARS1_partitions/AARS1_group3.fasta	../firstrun/newGeneCopies/AARS1/AARS1_partitions/AARS1_group3_AARS1OOODDX19BOOOEXOSC6.fasta	DDX19B,EXOSC6,AARS1,RN7SL279P,
../firstrun/newGeneCopies/H3C13/H3C13_partitions/H3C13_group1.fasta	../firstrun/newGeneCopies/H3C13/H3C13_partitions/H3C13_group1_H3C13OOOH2BC18OOOH2BP1.fasta	RP11-439A17.4,RP11-439A17.10,RP5-998N21.7,HIST2H2BB,H3C13,H3-2,H2BP1,H3P4,H2BP2,HIST2H3PS2,H2BC18,
../firstrun/newGeneCopies/CLCC1/CLCC1_partitions/CLCC1_group1.fasta	../firstrun/newGeneCopies/CLCC1/CLCC1_partitions/CLCC1_group1_CLCC1OOOAKNAD1OOOAL449266v1.fasta	GPSM2,AL449266.1,CLCC1,AKNAD1,
../firstrun/newGeneCopies/SKP1P3/SKP1P3_partitions/SKP1P3_group1.fasta	../firstrun/newGeneCopies/SKP1P3/SKP1P3_partitions/SKP1P3_group1_SKP1P3OOORP11-1082I11v2OOOZNF658.fasta	ZNF658B,SKP1P3,RP11-1082I11.2,ZNF658,
../firstrun/newGeneCopies/HLA-S/HLA-S_partitions/HLA-S_group1.fasta	../firstrun/newGeneCopies/HLA-S/HLA-S_partitions/HLA-S_group1_HLA-SOOOFGFR3POOOFGFR3P1.fasta	FGFR3P,ZDHHC20P2,FGFR3P1,HLA-S,XXbac-BPG248L24.14,
../firstrun/newGeneCopies/ZNF182/ZNF182_partitions/ZNF182_group1.fasta	../firstrun/newGeneCopies/ZNF182/ZNF182_partitions/ZNF182_group1_ZNF182OOORP11-38O23v3OOOSPACA5.fasta	SPACA5,ZNF630,RP11-38O23.3,ZNF182,ZNF81,SPACA5B,
../firstrun/newGeneCopies/PEX11B/PEX11B_partitions/PEX11B_group1.fasta	../firstrun/newGeneCopies/PEX11B/PEX11B_partitions/PEX11B_group1_PEX11BOOOGNRHR2OOOITGA10.fasta	GNRHR2,RBM8A,PEX11B,ITGA10,
../firstrun/newGeneCopies/C8G/C8G_partitions/C8G_group1.fasta	../firstrun/newGeneCopies/C8G/C8G_partitions/C8G_group1_C8GOOOFBXW5OOOLCN12.fasta	FBXW5,C8G,LCN12,
../firstrun/newGeneCopies/ABT1/ABT1_partitions/ABT1_group2.fasta	../firstrun/newGeneCopies/ABT1/ABT1_partitions/ABT1_group2_ABT1OOORP11-457M11v7.fasta	RP11-457M11.7,ABT1,
../firstrun/newGeneCopies/MATN1/MATN1_partitions/MATN1_group1.fasta	../firstrun/newGeneCopies/MATN1/MATN1_partitions/MATN1_group1_MATN1OOOMATN1-AS1.fasta	MATN1-AS1,MATN1,
../firstrun/newGeneCopies/FGF3/FGF3_partitions/FGF3_group1.fasta	../firstrun/newGeneCopies/FGF3/FGF3_partitions/FGF3_group1_FGF3.fasta	FGF3,
../firstrun/newGeneCopies/SPANXB1/SPANXB1_partitions/SPANXB1_group2.fasta	../firstrun/newGeneCopies/SPANXB1/SPANXB1_partitions/SPANXB1_group2_SPANXB1OOORP11-298A8v2OOOSPANXA1.fasta	SPANXB1,SPANXA1,SPANXA2-OT1,SPANXD,SPANXC,RP11-298A8.2,SPANXA2,
../firstrun/newGeneCopies/SAP30BP/SAP30BP_partitions/SAP30BP_group1.fasta	../firstrun/newGeneCopies/SAP30BP/SAP30BP_partitions/SAP30BP_group1_SAP30BPOOORECQL5OOORP11-474I11v7.fasta	RP11-474I11.8,SAP30BP,RP11-474I11.7,RECQL5,
../firstrun/newGeneCopies/SLC43A3/SLC43A3_partitions/SLC43A3_group1.fasta	../firstrun/newGeneCopies/SLC43A3/SLC43A3_partitions/SLC43A3_group1_SLC43A3OOORP11-872D17v8.fasta	SLC43A3,RP11-872D17.8,
../firstrun/newGeneCopies/USP17/USP17_partitions/USP17_group1.fasta	../firstrun/newGeneCopies/USP17/USP17_partitions/USP17_group1_USP17L1OOOUSP17L10OOOUSP17L11.fasta	USP17L10,USP17L3,USP17L12,RP11-1396O13.23,USP17L13,RP11-351I21.6,USP17L24,USP17L15,AC130360.8,USP17L20,USP17L17,USP17L22,USP17L23,USP17L26,USP17L25,USP17L19,FAM66A,FAM66B,USP17L9P,USP17L7,FAM66E,USP17L16P,FAM66D,USP17L2,USP17L21,RP11-1195F20.7,RP11-351I21.7,USP17L18,USP17L4,AC130360.7,USP17L11,USP17L30,USP17L5,USP17L6P,USP17L14P,USP17L28,RP11-1236K1.8,USP17L27,USP17L1,USP17L29,USP17L8,
../firstrun/newGeneCopies/PPM1M/PPM1M_partitions/PPM1M_group1.fasta	../firstrun/newGeneCopies/PPM1M/PPM1M_partitions/PPM1M_group1_PPM1MOOORP5-1157M23v2OOOTWF2.fasta	TWF2,RP5-1157M23.2,PPM1M,WDR82,
../firstrun/newGeneCopies/AC068533.7/AC068533.7_partitions/AC068533.7_group1.fasta	../firstrun/newGeneCopies/AC068533.7/AC068533.7_partitions/AC068533.7_group1_AC068533v7OOOASLOOOCRCP.fasta	ASL,RP5-1132H15.3,RP5-1132H15.1,CRCP,AC068533.7,
../firstrun/newGeneCopies/KLHDC7A/KLHDC7A_partitions/KLHDC7A_group1.fasta	../firstrun/newGeneCopies/KLHDC7A/KLHDC7A_partitions/KLHDC7A_group1_KLHDC7A.fasta	KLHDC7A,
../firstrun/newGeneCopies/WDR37/WDR37_partitions/WDR37_group1.fasta	../firstrun/newGeneCopies/WDR37/WDR37_partitions/WDR37_group1_WDR37OOOIDI1.fasta	WDR37,IDI1,
../firstrun/newGeneCopies/TBC1D8B/TBC1D8B_partitions/TBC1D8B_group5.fasta	../firstrun/newGeneCopies/TBC1D8B/TBC1D8B_partitions/TBC1D8B_group5_TBC1D8BOOOMORC4.fasta	TBC1D8B,MORC4,
../firstrun/newGeneCopies/TMEM11/TMEM11_partitions/TMEM11_group1.fasta	../firstrun/newGeneCopies/TMEM11/TMEM11_partitions/TMEM11_group1_TMEM11OOOAC087294v2.fasta	AC087294.2,TMEM11,
../firstrun/newGeneCopies/SNRPG/SNRPG_partitions/SNRPG_group3.fasta	../firstrun/newGeneCopies/SNRPG/SNRPG_partitions/SNRPG_group3_SNRPGOOOFAM136AOOOPCYOX1.fasta	FAM136A,SNRPG,PCYOX1,
../firstrun/newGeneCopies/ZNF281/ZNF281_partitions/ZNF281_group1.fasta	../firstrun/newGeneCopies/ZNF281/ZNF281_partitions/ZNF281_group1_ZNF281OOOLINC00862OOORP11-469A15v2.fasta	RP11-469A15.2,ZNF281,LINC00862,
../firstrun/newGeneCopies/C2orf/C2orf_partitions/C2orf_group33.fasta	../firstrun/newGeneCopies/C2orf/C2orf_partitions/C2orf_group33_C2orf92OOOACTR1BOOORNU4-8P.fasta	RNU4-8P,C2orf92,ACTR1B,
../firstrun/newGeneCopies/C2orf/C2orf_partitions/C2orf_group27.fasta	../firstrun/newGeneCopies/C2orf/C2orf_partitions/C2orf_group27_C2orf42OOOMIR1285-2OOOPCYOX1.fasta	RPL39P15,TIA1,MIR1285-2,C2orf42,PCYOX1,
../firstrun/newGeneCopies/DDX41/DDX41_partitions/DDX41_group1.fasta	../firstrun/newGeneCopies/DDX41/DDX41_partitions/DDX41_group1_DDX41OOODOK3OOOFAM193B.fasta	DDX41,DOK3,FAM193B,
../firstrun/newGeneCopies/AGAP4/AGAP4_partitions/AGAP4_group2.fasta	../firstrun/newGeneCopies/AGAP4/AGAP4_partitions/AGAP4_group2_AGAP4OOOAGAP10POOOAGAP11.fasta	RNA5SP312,AGAP10P,RP11-96C23.13,AGAP6,RP11-324H6.8,RNA5SP315,AGAP7P,PARGP1,RP11-96C23.10,RNA5SP311,AGAP5,BMS1P4,RP11-574K11.29,SYNPO2L-AS1,RP11-144G6.12,AGAP4,RP11-144G6.4,RNA5SP320,AGAP13P,RP11-96C23.14,AGAP11,RNA5SP310,RNA5SP317,BMS1P1,AGAP12P,TIMM23B-AGAP6,BMS1P4-AGAP5,BMS1P3,AGAP9,AGAP14P,RP11-96C23.5,
../firstrun/newGeneCopies/FAM3A/FAM3A_partitions/FAM3A_group1.fasta	../firstrun/newGeneCopies/FAM3A/FAM3A_partitions/FAM3A_group1_FAM3AOOOWI2-89031B12v1.fasta	FAM3A,WI2-89031B12.1,
../firstrun/newGeneCopies/LPA/LPA_partitions/LPA_group7.fasta	../firstrun/newGeneCopies/LPA/LPA_partitions/LPA_group7_LPAOOOLPAL2OOOPLG.fasta	LPA,RP1-81D8.7,LPAL2,PLG,SLC22A3,RP1-81D8.4,RP1-81D8.5,
../firstrun/newGeneCopies/SERTAD1/SERTAD1_partitions/SERTAD1_group1.fasta	../firstrun/newGeneCopies/SERTAD1/SERTAD1_partitions/SERTAD1_group1_SERTAD1OOOCTC-492K19v7.fasta	CTC-492K19.7,SERTAD1,
../firstrun/newGeneCopies/AKAP17A/AKAP17A_partitions/AKAP17A_group1.fasta	../firstrun/newGeneCopies/AKAP17A/AKAP17A_partitions/AKAP17A_group1_AKAP17A.fasta	AKAP17A,
../firstrun/newGeneCopies/ADAMTS10/ADAMTS10_partitions/ADAMTS10_group1.fasta	../firstrun/newGeneCopies/ADAMTS10/ADAMTS10_partitions/ADAMTS10_group1_ADAMTS10OOOAC130469v2OOOMYO1F.fasta	AC130469.2,MYO1F,ADAMTS10,
../firstrun/newGeneCopies/RESF1/RESF1_partitions/RESF1_group1.fasta	../firstrun/newGeneCopies/RESF1/RESF1_partitions/RESF1_group1_RESF1OOOLINC02422OOORP11-50I19v2.fasta	RESF1,RP11-50I19.2,LINC02422,
../firstrun/newGeneCopies/FAM9A/FAM9A_partitions/FAM9A_group1.fasta	../firstrun/newGeneCopies/FAM9A/FAM9A_partitions/FAM9A_group1_FAM9AOOOFAM9B.fasta	FAM9B,FAM9A,
../firstrun/newGeneCopies/KIR2DS/KIR2DS_partitions/KIR2DS_group1.fasta	../firstrun/newGeneCopies/KIR2DS/KIR2DS_partitions/KIR2DS_group1_KIR2DS1OOOKIR2DS2OOOKIR2DS3.fasta	KIR2DL2,GU182347.12,KIR2DS5,KIR2DL3,KIR3DP1,KIR2DS3,KIR3DS1,GU182339.12,CTB-61M7.1,KIR3DL3,ENSG00000288316,KIR2DP1,GU182355.5,ENSG00000288389,KIR3DL2,ENSG00000284511,GU182351.6,ENSG00000284033,GU182358.3,GU182352.4,KIR2DS4,GU182357.5,GU182339.6,GU182343.7,ENSG00000284225,KIR2DL5B,ENSG00000288613,GU182343.5,ENSG00000283902,GU182354.3,ENSG00000283784,KIR2DS2,ENSG00000284169,ENSG00000284301,KIR2DL1,ENSG00000284101,ENSG00000284053,GU182354.5,GU182352.6,ENSG00000288650,GU182338.2,ENSG00000275583,GU182351.11,KIR2DS1,ENSG00000288381,KIR3DL1,ENSG00000284555,KIR2DL5A,GU182353.5,ENSG00000283716,ENSG00000283742,ENSG00000284580,ENSG00000283722,KIR2DL4,ENSG00000283763,GU182360.3,
../firstrun/newGeneCopies/TMEM211/TMEM211_partitions/TMEM211_group1.fasta	../firstrun/newGeneCopies/TMEM211/TMEM211_partitions/TMEM211_group1_TMEM211.fasta	TMEM211,
../firstrun/newGeneCopies/ABO/ABO_partitions/ABO_group1.fasta	../firstrun/newGeneCopies/ABO/ABO_partitions/ABO_group1_ABOOOOLCN1OOOLCN1P1.fasta	LCN1P1,LCN1,ABO,
../firstrun/newGeneCopies/COG4/COG4_partitions/COG4_group1.fasta	../firstrun/newGeneCopies/COG4/COG4_partitions/COG4_group1_COG4OOOFCSKOOOSF3B3.fasta	COG4,SF3B3,SNORD111B,FCSK,
../firstrun/newGeneCopies/RHOD/RHOD_partitions/RHOD_group1.fasta	../firstrun/newGeneCopies/RHOD/RHOD_partitions/RHOD_group1_RHODOOOSYT12.fasta	RHOD,SYT12,
../firstrun/newGeneCopies/PTPRC/PTPRC_partitions/PTPRC_group1.fasta	../firstrun/newGeneCopies/PTPRC/PTPRC_partitions/PTPRC_group1_PTPRCOOOPEBP1P3OOORP11-553K8v5.fasta	PEBP1P3,PTPRC,RP11-553K8.5,
../firstrun/newGeneCopies/FBXW5/FBXW5_partitions/FBXW5_group1.fasta	../firstrun/newGeneCopies/FBXW5/FBXW5_partitions/FBXW5_group1_FBXW5OOOC8GOOOLCN12.fasta	LCN12,RP11-229P13.25,C8G,FBXW5,RP11-229P13.2,
../firstrun/newGeneCopies/HLA-DRA/HLA-DRA_partitions/HLA-DRA_group1.fasta	../firstrun/newGeneCopies/HLA-DRA/HLA-DRA_partitions/HLA-DRA_group1_HLA-DRA.fasta	HLA-DRA,
../firstrun/newGeneCopies/SPDYE6/SPDYE6_partitions/SPDYE6_group1.fasta	../firstrun/newGeneCopies/SPDYE6/SPDYE6_partitions/SPDYE6_group1_SPDYE6OOOAC004951v6OOOAC004980v9.fasta	PMS2CL,SPDYE10P,RP11-514P8.10,SPDYE13,SPDYE14P,SPDYE20P,CH17-264B6.1,SPDYE9,PMS2P2,PMS2P6,SPDYE6,SPDYE18,CH17-264B6.6,SPDYE17,RP11-514P8.7,AC004951.6,SPDYE14,SPDYE15,AC004980.9,SPDYE3,CH17-264B6.3,SPDYE2B,RP11-577H5.5,SPDYE13P,PMS2P10,SPDYE21,SPDYE8,SPDYE19P,POLR2J3,DTX2P1-UPK3BP1-PMS2P11,RP5-1022I14.2,RNF216P1,POLR2J2,RBAK-RBAKDN,SPDYE2,PMS2P4,POLR2J4,PMS2P8,SPDYE11,RP5-1165K10.2,SPDYE15P,RP11-467H10.2,PMS2P1,SPDYE1,SPDYE16,SPDYE12P,SPDYE5,PMS2P7,SPDYE7P,
../firstrun/newGeneCopies/NUDT/NUDT_partitions/NUDT_group1.fasta	../firstrun/newGeneCopies/NUDT/NUDT_partitions/NUDT_group1_NUDT4OOONUDT4BOOONUDT4P2.fasta	NUDT4,NUDT4P2,RP11-486A14.2,NUDT4B,UBE2N,
../firstrun/newGeneCopies/NUDT/NUDT_partitions/NUDT_group35.fasta	../firstrun/newGeneCopies/NUDT/NUDT_partitions/NUDT_group35_NUDT8OOOTBX10.fasta	NUDT8,TBX10,
../firstrun/newGeneCopies/APBA2/APBA2_partitions/APBA2_group4.fasta	../firstrun/newGeneCopies/APBA2/APBA2_partitions/APBA2_group4_APBA2OOOFAM189A1.fasta	APBA2,FAM189A1,
../firstrun/newGeneCopies/APBA2/APBA2_partitions/APBA2_group1.fasta	../firstrun/newGeneCopies/APBA2/APBA2_partitions/APBA2_group1_APBA2OOOGOLGA8AOOOGOLGA8B.fasta	GOLGA8A,RP11-1H8.4,WI2-2413G8.1,APBA2,RP11-1H8.5,RP11-1H8.1,GOLGA8B,
../firstrun/newGeneCopies/APBA2/APBA2_partitions/APBA2_group2.fasta	../firstrun/newGeneCopies/APBA2/APBA2_partitions/APBA2_group2_APBA2.fasta	APBA2,
../firstrun/newGeneCopies/APOE/APOE_partitions/APOE_group1.fasta	../firstrun/newGeneCopies/APOE/APOE_partitions/APOE_group1_APOEOOOAPOC1OOOCTB-129P6v7.fasta	APOC1,APOE,CTB-129P6.7,TOMM40,
../firstrun/newGeneCopies/STK39/STK39_partitions/STK39_group5.fasta	../firstrun/newGeneCopies/STK39/STK39_partitions/STK39_group5_STK39.fasta	STK39,
../firstrun/newGeneCopies/STK39/STK39_partitions/STK39_group4.fasta	../firstrun/newGeneCopies/STK39/STK39_partitions/STK39_group4_STK39.fasta	STK39,
../firstrun/newGeneCopies/STK39/STK39_partitions/STK39_group6.fasta	../firstrun/newGeneCopies/STK39/STK39_partitions/STK39_group6_STK39OOOPHF5GP.fasta	STK39,PHF5GP,
../firstrun/newGeneCopies/STK39/STK39_partitions/STK39_group1.fasta	../firstrun/newGeneCopies/STK39/STK39_partitions/STK39_group1_STK39.fasta	STK39,
../firstrun/newGeneCopies/STK39/STK39_partitions/STK39_group3.fasta	../firstrun/newGeneCopies/STK39/STK39_partitions/STK39_group3_STK39.fasta	STK39,
../firstrun/newGeneCopies/MYEOV/MYEOV_partitions/MYEOV_group2.fasta	../firstrun/newGeneCopies/MYEOV/MYEOV_partitions/MYEOV_group2_MYEOV.fasta	MYEOV,
../firstrun/newGeneCopies/MYEOV/MYEOV_partitions/MYEOV_group1.fasta	../firstrun/newGeneCopies/MYEOV/MYEOV_partitions/MYEOV_group1_MYEOVOOOIFITM9P.fasta	IFITM9P,MYEOV,
../firstrun/newGeneCopies/OPTN/OPTN_partitions/OPTN_group1.fasta	../firstrun/newGeneCopies/OPTN/OPTN_partitions/OPTN_group1_OPTNOOOCCDC3OOORP11-730A19v9.fasta	RP11-730A19.9,CCDC3,SNRPGP5,OPTN,
../firstrun/newGeneCopies/GTF2H/GTF2H_partitions/GTF2H_group3.fasta	../firstrun/newGeneCopies/GTF2H/GTF2H_partitions/GTF2H_group3_GTF2H2OOOGTF2H2BOOOGTF2H2C.fasta	GTF2H2B,GTF2H2,GTF2H2C,OCLN,ENSG00000280514,RP11-1275J23.2,GTF2H2C_2,RP11-497H16.9,RP11-1151M9.1,
../firstrun/newGeneCopies/HRNR/HRNR_partitions/HRNR_group1.fasta	../firstrun/newGeneCopies/HRNR/HRNR_partitions/HRNR_group1_HRNROOOFLG-AS1.fasta	HRNR,FLG-AS1,
../firstrun/newGeneCopies/WDR73/WDR73_partitions/WDR73_group1.fasta	../firstrun/newGeneCopies/WDR73/WDR73_partitions/WDR73_group1_WDR73OOOMetazoa_SRPOOONMB.fasta	Metazoa_SRP,SCAND2P,NMB,WDR73,
../firstrun/newGeneCopies/FCRL/FCRL_partitions/FCRL_group10.fasta	../firstrun/newGeneCopies/FCRL/FCRL_partitions/FCRL_group10_FCRLAOOOFCRLB.fasta	FCRLB,FCRLA,
../firstrun/newGeneCopies/NR2E1/NR2E1_partitions/NR2E1_group1.fasta	../firstrun/newGeneCopies/NR2E1/NR2E1_partitions/NR2E1_group1_NR2E1OOOOSTM1OOORP3-429G5v5.fasta	RP3-429G5.5,NR2E1,OSTM1,
../firstrun/newGeneCopies/CEP43/CEP43_partitions/CEP43_group1.fasta	../firstrun/newGeneCopies/CEP43/CEP43_partitions/CEP43_group1_CEP43OOOMIR3939OOORP1-167A14v2.fasta	CEP43,RP1-167A14.3,RP11-517H2.6,RP1-167A14.2,MIR3939,
../firstrun/newGeneCopies/SLC26A/SLC26A_partitions/SLC26A_group17.fasta	../firstrun/newGeneCopies/SLC26A/SLC26A_partitions/SLC26A_group17_SLC26A8OOODPRXP2OOOMAPK14.fasta	DPRXP2,MAPK14,SLC26A8,
../firstrun/newGeneCopies/SLC26A/SLC26A_partitions/SLC26A_group43.fasta	../firstrun/newGeneCopies/SLC26A/SLC26A_partitions/SLC26A_group43_SLC26A11OOOSGSH.fasta	SGSH,SLC26A11,
../firstrun/newGeneCopies/RP11-554A11.11/RP11-554A11.11_partitions/RP11-554A11.11_group1.fasta	../firstrun/newGeneCopies/RP11-554A11.11/RP11-554A11.11_partitions/RP11-554A11.11_group1_RP11-554A11v11OOOMIR3164OOORP11-554A11v7.fasta	TPCN2,MIR3164,RP11-554A11.7,SMIM38,RP11-554A11.8,RP11-554A11.11,
../firstrun/newGeneCopies/IGKV1/IGKV1_partitions/IGKV1_group5.fasta	../firstrun/newGeneCopies/IGKV1/IGKV1_partitions/IGKV1_group5_IGKV1-12OOOIGKV1-13OOOIGKV1-16.fasta	IGKV1D-12,IGKV1-8,CTD-2007N20.1,IGKV1-5,IGKV1D-16,IGKV1D-8,IGKV1-13,IGKV6D-41,IGKV1D-35,IGKV1-12,IGKV1-9,IGKV1-16,IGKV2D-36,IGKV1-17,IGKV1D-37,IGKV1-6,IGKV1D-17,IGKV1D-42,IGKV1D-13,IGKV1D-43,
../firstrun/newGeneCopies/ANP32E/ANP32E_partitions/ANP32E_group1.fasta	../firstrun/newGeneCopies/ANP32E/ANP32E_partitions/ANP32E_group1_ANP32EOOORNU2-17P.fasta	RNU2-17P,ANP32E,
../firstrun/newGeneCopies/ZNF735/ZNF735_partitions/ZNF735_group6.fasta	../firstrun/newGeneCopies/ZNF735/ZNF735_partitions/ZNF735_group6_ZNF735OOOZNF722P.fasta	ZNF735,ZNF722P,
../firstrun/newGeneCopies/FLT4/FLT4_partitions/FLT4_group3.fasta	../firstrun/newGeneCopies/FLT4/FLT4_partitions/FLT4_group3_FLT4.fasta	FLT4,
../firstrun/newGeneCopies/GJC2/GJC2_partitions/GJC2_group1.fasta	../firstrun/newGeneCopies/GJC2/GJC2_partitions/GJC2_group1_GJC2OOOGUK1.fasta	GUK1,GJC2,
../firstrun/newGeneCopies/TDRKH/TDRKH_partitions/TDRKH_group1.fasta	../firstrun/newGeneCopies/TDRKH/TDRKH_partitions/TDRKH_group1_TDRKHOOOTDRKH-AS1OOOOAZ3.fasta	RP11-98D18.3,TDRKH-AS1,TDRKH,OAZ3,
../firstrun/newGeneCopies/ZBED1/ZBED1_partitions/ZBED1_group2.fasta	../firstrun/newGeneCopies/ZBED1/ZBED1_partitions/ZBED1_group2_ZBED1OOODHRSX.fasta	ZBED1,DHRSX,
../firstrun/newGeneCopies/RPLP0/RPLP0_partitions/RPLP0_group2.fasta	../firstrun/newGeneCopies/RPLP0/RPLP0_partitions/RPLP0_group2_RPLP0OOORPLP0P6OOOGCN1.fasta	GCN1,PXN-AS1,RPLP0,RPLP0P6,LINC02613,
../firstrun/newGeneCopies/PNPLA5/PNPLA5_partitions/PNPLA5_group1.fasta	../firstrun/newGeneCopies/PNPLA5/PNPLA5_partitions/PNPLA5_group1_PNPLA5.fasta	PNPLA5,
../firstrun/newGeneCopies/TTLL1/TTLL1_partitions/TTLL1_group8.fasta	../firstrun/newGeneCopies/TTLL1/TTLL1_partitions/TTLL1_group8_TTLL1OOOTTLL1-AS1OOOAL022237v3.fasta	TTLL1,AL022237.3,TTLL1-AS1,
../firstrun/newGeneCopies/AMY/AMY_partitions/AMY_group1.fasta	../firstrun/newGeneCopies/AMY/AMY_partitions/AMY_group1_AMY1AOOOAMY1BOOOAMY1C.fasta	RNPC3,RP5-1108M17.5,AMYP1,AMY2B,AMY1B,AMY1C,AMY1A,ACTG1P4,AMY2A,
../firstrun/newGeneCopies/SLC44A4/SLC44A4_partitions/SLC44A4_group1.fasta	../firstrun/newGeneCopies/SLC44A4/SLC44A4_partitions/SLC44A4_group1_SLC44A4OOOCYP21A2OOOEHMT2.fasta	EHMT2,EHMT2-AS1,NEU1,CYP21A2,SLC44A4,
../firstrun/newGeneCopies/RIN1/RIN1_partitions/RIN1_group1.fasta	../firstrun/newGeneCopies/RIN1/RIN1_partitions/RIN1_group1_RIN1OOOBRMS1OOORP11-867G23v12.fasta	BRMS1,RP11-867G23.12,RIN1,
../firstrun/newGeneCopies/STIMATE/STIMATE_partitions/STIMATE_group1.fasta	../firstrun/newGeneCopies/STIMATE/STIMATE_partitions/STIMATE_group1_STIMATEOOOSTIMATE-MUSTN1OOOITIH4.fasta	STIMATE-MUSTN1,STIMATE,RP5-966M1.6,RP11-894J14.2,ITIH4,MIR8064,MUSTN1,
../firstrun/newGeneCopies/ADAMTSL4/ADAMTSL4_partitions/ADAMTSL4_group1.fasta	../firstrun/newGeneCopies/ADAMTSL4/ADAMTSL4_partitions/ADAMTSL4_group1_ADAMTSL4OOOADAMTSL4-AS1OOOADAMTSL4-AS2.fasta	ADAMTSL4-AS2,ADAMTSL4-AS1,MIR4257,MCL1,ADAMTSL4,
../firstrun/newGeneCopies/ACY3/ACY3_partitions/ACY3_group1.fasta	../firstrun/newGeneCopies/ACY3/ACY3_partitions/ACY3_group1_ACY3OOOAP003385v2OOOTBX10.fasta	TBX10,AP003385.2,ACY3,
../firstrun/newGeneCopies/SRPK3/SRPK3_partitions/SRPK3_group1.fasta	../firstrun/newGeneCopies/SRPK3/SRPK3_partitions/SRPK3_group1_SRPK3OOOIDH3GOOOPLXNB3.fasta	PLXNB3,SRPK3,IDH3G,
../firstrun/newGeneCopies/SURF4/SURF4_partitions/SURF4_group1.fasta	../firstrun/newGeneCopies/SURF4/SURF4_partitions/SURF4_group1_SURF4OOOSTKLD1OOOSURF2.fasta	STKLD1,SURF2,SURF4,
../firstrun/newGeneCopies/CRYM/CRYM_partitions/CRYM_group3.fasta	../firstrun/newGeneCopies/CRYM/CRYM_partitions/CRYM_group3_CRYMOOOCRYM-AS1OOOAF001550v9.fasta	CRYM-AS1,CRYM,AF001550.9,ANKS4B,
../firstrun/newGeneCopies/NPPA/NPPA_partitions/NPPA_group1.fasta	../firstrun/newGeneCopies/NPPA/NPPA_partitions/NPPA_group1_NPPAOOOCLCN6OOOENSG10010134403v1.fasta	ENSG10010138681.1,NPPA,ENSG10010134403.1,CLCN6,ENSG10010135835.1,
../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group2.fasta	../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group2_OR8K5OOOOR5J7P.fasta	OR8K5,OR5J7P,
../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group1.fasta	../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group1_OR8H2OOOOR8H3OOOOR8I2.fasta	OR5BN1P,OR8K4P,OR5BN2P,OR8I2,OR8H3,OR8I4P,OR8J3,OR8H2,
../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group7.fasta	../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group7_OR8J1OOOOR8K1OOOOR8K2P.fasta	OR8K1,OR8K2P,RPL5P29,FAM8A2P,OR8J1,
../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group16.fasta	../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group16_OR8B1POOOOR8B2OOOOR8B3.fasta	OR8B5P,OR8X1P,OR8B1P,OR8B3,RP11-164A10.7,OR8B2,OR8C1P,
../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group6.fasta	../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group6_OR8K3.fasta	OR8K3,
../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group5.fasta	../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group5_OR8H1OOOOR8I1P.fasta	OR8I1P,OR8H1,
../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group9.fasta	../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group9_OR8U3OOOOR5AL1.fasta	OR8U3,OR5AL1,
../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group8.fasta	../firstrun/newGeneCopies/OR8/OR8_partitions/OR8_group8_OR8L1POOOOR8U1OOOOR8U8.fasta	OR8U9,OR8U1,OR8U8,OR8L1P,
../firstrun/newGeneCopies/PRAG1/PRAG1_partitions/PRAG1_group1.fasta	../firstrun/newGeneCopies/PRAG1/PRAG1_partitions/PRAG1_group1_PRAG1.fasta	PRAG1,
../firstrun/newGeneCopies/FKBP6/FKBP6_partitions/FKBP6_group1.fasta	../firstrun/newGeneCopies/FKBP6/FKBP6_partitions/FKBP6_group1_FKBP6OOOAC005488v11OOOAC006014v8.fasta	AC005488.11,AC006014.8,STAG3L1,FKBP6,TRIM74,STAG3L3,RNU6-1080P,TRIM50,TRIM73,
../firstrun/newGeneCopies/HMGA/HMGA_partitions/HMGA_group4.fasta	../firstrun/newGeneCopies/HMGA/HMGA_partitions/HMGA_group4_HMGA1OOOMIR6835OOORP11-513I15v6.fasta	MIR6835,RP11-513I15.6,HMGA1,SMIM29,
../firstrun/newGeneCopies/TSPO/TSPO_partitions/TSPO_group5.fasta	../firstrun/newGeneCopies/TSPO/TSPO_partitions/TSPO_group5_TSPOOOOMCAT.fasta	MCAT,TSPO,
../firstrun/newGeneCopies/DDX11/DDX11_partitions/DDX11_group5.fasta	../firstrun/newGeneCopies/DDX11/DDX11_partitions/DDX11_group5_DDX11OOODDX11-AS1OOOCTD-2318O12v1.fasta	RP11-22B23.1,DDX11-AS1,RP11-551L14.7,RP11-599J14.2,RP11-22B23.2,DDX11,CTD-2318O12.1,RP11-726G1.2,DDX12P,SNORA75,
../firstrun/newGeneCopies/FAM50A/FAM50A_partitions/FAM50A_group1.fasta	../firstrun/newGeneCopies/FAM50A/FAM50A_partitions/FAM50A_group1_FAM50AOOOGDI1OOOMIR6858.fasta	FAM50A,GDI1,MIR6858,
../firstrun/newGeneCopies/TMEM151/TMEM151_partitions/TMEM151_group3.fasta	../firstrun/newGeneCopies/TMEM151/TMEM151_partitions/TMEM151_group3_TMEM151AOOOYIF1A.fasta	YIF1A,TMEM151A,
../firstrun/newGeneCopies/SIGLEC16/SIGLEC16_partitions/SIGLEC16_group1.fasta	../firstrun/newGeneCopies/SIGLEC16/SIGLEC16_partitions/SIGLEC16_group1_SIGLEC16OOOCTC-326K19v6OOOCTD-2616J11v3.fasta	SIGLEC16,SIGLEC11,VRK3,SIGLEC10-AS1,CTC-326K19.6,CTD-2616J11.3,SIGLEC10,
../firstrun/newGeneCopies/CD276/CD276_partitions/CD276_group1.fasta	../firstrun/newGeneCopies/CD276/CD276_partitions/CD276_group1_CD276.fasta	CD276,
../firstrun/newGeneCopies/FAM236D/FAM236D_partitions/FAM236D_group2.fasta	../firstrun/newGeneCopies/FAM236D/FAM236D_partitions/FAM236D_group2_FAM236DOOODMRTC1OOODMRTC1B.fasta	DMRTC1B,DMRTC1,FAM236C,FAM236D,
../firstrun/newGeneCopies/GPER1/GPER1_partitions/GPER1_group1.fasta	../firstrun/newGeneCopies/GPER1/GPER1_partitions/GPER1_group1_GPER1OOOAC091729v7OOOAC091729v8.fasta	AC091729.7,C7orf50,AC091729.8,GPER1,
../firstrun/newGeneCopies/ADAMTSL5/ADAMTSL5_partitions/ADAMTSL5_group1.fasta	../firstrun/newGeneCopies/ADAMTSL5/ADAMTSL5_partitions/ADAMTSL5_group1_ADAMTSL5OOOCTB-25B13v9OOOPLK5.fasta	PLK5,CTB-25B13.9,ADAMTSL5,
../firstrun/newGeneCopies/KCTD7/KCTD7_partitions/KCTD7_group1.fasta	../firstrun/newGeneCopies/KCTD7/KCTD7_partitions/KCTD7_group1_KCTD7OOOGS1-124K5v12OOORP11-792A8v5.fasta	RP11-792A8.5,GS1-124K5.12,KCTD7,RP4-756H11.3,
../firstrun/newGeneCopies/RPS17/RPS17_partitions/RPS17_group11.fasta	../firstrun/newGeneCopies/RPS17/RPS17_partitions/RPS17_group11_RPS17OOOCH17-66N5v1OOOCPEB1.fasta	RP11-379H8.1,RP11-152F13.10,CPEB1,CH17-66N5.1,RPS17,DNM1P38,
../firstrun/newGeneCopies/RTEL1/RTEL1_partitions/RTEL1_group2.fasta	../firstrun/newGeneCopies/RTEL1/RTEL1_partitions/RTEL1_group2_RTEL1OOORTEL1-TNFRSF6BOOOARFRP1.fasta	RTEL1-TNFRSF6B,STMN3,TNFRSF6B,RTEL1,ARFRP1,
../firstrun/newGeneCopies/CELSR2/CELSR2_partitions/CELSR2_group1.fasta	../firstrun/newGeneCopies/CELSR2/CELSR2_partitions/CELSR2_group1_CELSR2.fasta	CELSR2,
../firstrun/newGeneCopies/QPRT/QPRT_partitions/QPRT_group3.fasta	../firstrun/newGeneCopies/QPRT/QPRT_partitions/QPRT_group3_QPRTOOOAC009086v2OOOSPN.fasta	QPRT,SPN,AC009086.2,
../firstrun/newGeneCopies/PET117/PET117_partitions/PET117_group1.fasta	../firstrun/newGeneCopies/PET117/PET117_partitions/PET117_group1_PET117OOOKAT14.fasta	PET117,KAT14,
../firstrun/newGeneCopies/KAT5/KAT5_partitions/KAT5_group1.fasta	../firstrun/newGeneCopies/KAT5/KAT5_partitions/KAT5_group1_KAT5OOORNASEH2C.fasta	RNASEH2C,KAT5,
../firstrun/newGeneCopies/SULT1A/SULT1A_partitions/SULT1A_group1.fasta	../firstrun/newGeneCopies/SULT1A/SULT1A_partitions/SULT1A_group1_SLX1A-SULT1A3OOOSLX1B-SULT1A4OOOSULT1A1.fasta	RP11-345J4.3,RP11-347C12.3,PDXDC2P,RP11-666O2.4,RP11-666O2.7,SULT1A2,RP11-1021N1.1,SLX1A,RP11-345J4.11,RP11-666O2.6,RP11-231C14.10,SULT1A4,RP11-347C12.4,SULT1A1,SLX1A-SULT1A3,PDXDC2P-NPIPB14P,RP11-666O2.5,MPV17L,RP11-345J4.4,SGF29,SULT1A3,SLX1B,SLX1B-SULT1A4,
../firstrun/newGeneCopies/CSNK2/CSNK2_partitions/CSNK2_group1.fasta	../firstrun/newGeneCopies/CSNK2/CSNK2_partitions/CSNK2_group1_CSNK2BOOOENSG00000258543OOOENSG00000258589.fasta	XXbac-BPG32J3.22,LY6G5C,ENSG00000258589,CSNK2B,Y_RNA,ENSG00000258543,LY6G5B,GPANK1,
../firstrun/newGeneCopies/CSNK2/CSNK2_partitions/CSNK2_group2.fasta	../firstrun/newGeneCopies/CSNK2/CSNK2_partitions/CSNK2_group2_CSNK2A1OOOCSNK2A3OOOGALNT18.fasta	RP11-567I13.1,CSNK2A3,GALNT18,CSNK2A1,
../firstrun/newGeneCopies/CSNK2/CSNK2_partitions/CSNK2_group3.fasta	../firstrun/newGeneCopies/CSNK2/CSNK2_partitions/CSNK2_group3_CSNK2A2OOORN7SL645POOORP11-459F6v1.fasta	RP11-459F6.1,RN7SL645P,RP11-459F6.3,CSNK2A2,
../firstrun/newGeneCopies/TSSK2/TSSK2_partitions/TSSK2_group1.fasta	../firstrun/newGeneCopies/TSSK2/TSSK2_partitions/TSSK2_group1_TSSK2OOOAC004471v10OOOAC004471v9.fasta	AC004471.10,TSSK2,TSSK1A,ESS2,AC004471.9,
../firstrun/newGeneCopies/TMC4/TMC4_partitions/TMC4_group1.fasta	../firstrun/newGeneCopies/TMC4/TMC4_partitions/TMC4_group1_TMC4OOOLENG1OOOMBOAT7.fasta	TMC4,LENG1,MBOAT7,
../firstrun/newGeneCopies/ACAD10/ACAD10_partitions/ACAD10_group1.fasta	../firstrun/newGeneCopies/ACAD10/ACAD10_partitions/ACAD10_group1_ACAD10OOOBRAPOOORP11-162P23v2.fasta	RP11-162P23.2,BRAP,ACAD10,
../firstrun/newGeneCopies/VPS37/VPS37_partitions/VPS37_group6.fasta	../firstrun/newGeneCopies/VPS37/VPS37_partitions/VPS37_group6_VPS37BOOOHIP1ROOORP11-463O12v3.fasta	RP11-463O12.5,RP11-463O12.3,HIP1R,VPS37B,
../firstrun/newGeneCopies/VPS37/VPS37_partitions/VPS37_group2.fasta	../firstrun/newGeneCopies/VPS37/VPS37_partitions/VPS37_group2_VPS37D.fasta	VPS37D,
../firstrun/newGeneCopies/ITIH6/ITIH6_partitions/ITIH6_group3.fasta	../firstrun/newGeneCopies/ITIH6/ITIH6_partitions/ITIH6_group3_ITIH6OOORP6-14C6v3.fasta	RP6-14C6.3,ITIH6,
../firstrun/newGeneCopies/MLLT11/MLLT11_partitions/MLLT11_group1.fasta	../firstrun/newGeneCopies/MLLT11/MLLT11_partitions/MLLT11_group1_MLLT11OOOCDC42SE1OOOGABPB2.fasta	GABPB2,MLLT11,CDC42SE1,
../firstrun/newGeneCopies/NPTN/NPTN_partitions/NPTN_group2.fasta	../firstrun/newGeneCopies/NPTN/NPTN_partitions/NPTN_group2_NPTN.fasta	NPTN,
../firstrun/newGeneCopies/NPTN/NPTN_partitions/NPTN_group1.fasta	../firstrun/newGeneCopies/NPTN/NPTN_partitions/NPTN_group1_NPTNOOONPTN-IT1OOOREC114.fasta	NPTN,REC114,NPTN-IT1,
../firstrun/newGeneCopies/CPNE5/CPNE5_partitions/CPNE5_group2.fasta	../firstrun/newGeneCopies/CPNE5/CPNE5_partitions/CPNE5_group2_CPNE5OOORP3-431A14v8.fasta	CPNE5,RP3-431A14.8,
../firstrun/newGeneCopies/CPNE5/CPNE5_partitions/CPNE5_group1.fasta	../firstrun/newGeneCopies/CPNE5/CPNE5_partitions/CPNE5_group1_CPNE5OOORP3-431A14v4OOORP3-431A14v7.fasta	RP3-431A14.7,CPNE5,RP3-431A14.4,
../firstrun/newGeneCopies/TYK2/TYK2_partitions/TYK2_group1.fasta	../firstrun/newGeneCopies/TYK2/TYK2_partitions/TYK2_group1_TYK2.fasta	TYK2,
../firstrun/newGeneCopies/BEST2/BEST2_partitions/BEST2_group1.fasta	../firstrun/newGeneCopies/BEST2/BEST2_partitions/BEST2_group1_BEST2OOOGET3.fasta	GET3,BEST2,
../firstrun/newGeneCopies/DEFB116/DEFB116_partitions/DEFB116_group1.fasta	../firstrun/newGeneCopies/DEFB116/DEFB116_partitions/DEFB116_group1_DEFB116OOORPL31P3.fasta	DEFB116,RPL31P3,
../firstrun/newGeneCopies/ZNF217/ZNF217_partitions/ZNF217_group1.fasta	../firstrun/newGeneCopies/ZNF217/ZNF217_partitions/ZNF217_group1_ZNF217OOOAC005301v9OOOAC005808v3.fasta	TPTE,BAGE2,AC005301.9,TPTEP2,TPTEP2-CSNK1E,KB-7G2.9,ZNF217,TPTEP1,RP1-5O6.4,AL078471.5,AC005808.3,
../firstrun/newGeneCopies/ERI1/ERI1_partitions/ERI1_group4.fasta	../firstrun/newGeneCopies/ERI1/ERI1_partitions/ERI1_group4_ERI1OOOMetazoa_SRP.fasta	ERI1,Metazoa_SRP,
../firstrun/newGeneCopies/ERI1/ERI1_partitions/ERI1_group3.fasta	../firstrun/newGeneCopies/ERI1/ERI1_partitions/ERI1_group3_ERI1OOOMIR4660OOORNU7-55P.fasta	ERI1,RNU7-55P,MIR4660,
../firstrun/newGeneCopies/ERI1/ERI1_partitions/ERI1_group2.fasta	../firstrun/newGeneCopies/ERI1/ERI1_partitions/ERI1_group2_ERI1.fasta	ERI1,
../firstrun/newGeneCopies/FOLH1/FOLH1_partitions/FOLH1_group2.fasta	../firstrun/newGeneCopies/FOLH1/FOLH1_partitions/FOLH1_group2_FOLH1OOOFOLH1BOOOAP006587v1.fasta	UBTFL10,AP006587.1,RP11-163O19.1,FOLH1,RP11-163O19.11,FOLH1B,
../firstrun/newGeneCopies/ZNF687/ZNF687_partitions/ZNF687_group1.fasta	../firstrun/newGeneCopies/ZNF687/ZNF687_partitions/ZNF687_group1_ZNF687OOOZNF687-AS1OOOPI4KB.fasta	ZNF687-AS1,ZNF687,PI4KB,
../firstrun/newGeneCopies/RUSF1/RUSF1_partitions/RUSF1_group1.fasta	../firstrun/newGeneCopies/RUSF1/RUSF1_partitions/RUSF1_group1_RUSF1OOOAC026471v6OOORP11-452L6v7.fasta	RP11-452L6.7,RUSF1,SLC5A2,AC026471.6,
../firstrun/newGeneCopies/CCL2/CCL2_partitions/CCL2_group1.fasta	../firstrun/newGeneCopies/CCL2/CCL2_partitions/CCL2_group1_CCL2.fasta	CCL2,
../firstrun/newGeneCopies/ZFP57/ZFP57_partitions/ZFP57_group1.fasta	../firstrun/newGeneCopies/ZFP57/ZFP57_partitions/ZFP57_group1_ZFP57OOOMOG.fasta	MOG,ZFP57,
../firstrun/newGeneCopies/RECQ/RECQ_partitions/RECQ_group4.fasta	../firstrun/newGeneCopies/RECQ/RECQ_partitions/RECQ_group4_RECQL5OOOMYO15BOOOSAP30BP.fasta	SMIM6,RECQL5,SMIM5,MYO15B,SAP30BP,
../firstrun/newGeneCopies/CENPS/CENPS_partitions/CENPS_group1.fasta	../firstrun/newGeneCopies/CENPS/CENPS_partitions/CENPS_group1_CENPSOOOCENPS-CORTOOOCORT.fasta	CENPS-CORT,CENPS,CORT,RP4-736L20.3,
../firstrun/newGeneCopies/RPL27/RPL27_partitions/RPL27_group10.fasta	../firstrun/newGeneCopies/RPL27/RPL27_partitions/RPL27_group10_RPL27AOOODENND2BOOORP11-152H18v3.fasta	TRIM66,DENND2B,SNORA3B,RP11-152H18.3,RPL27A,RP11-152H18.4,SNORA3A,
../firstrun/newGeneCopies/ARID/ARID_partitions/ARID_group4.fasta	../firstrun/newGeneCopies/ARID/ARID_partitions/ARID_group4_ARID3BOOOARID3BP1OOOADGRL2.fasta	RP5-837I24.6,ADGRL2,ARID3BP1,CTD-3154N5.2,CLK3,ARID3B,
../firstrun/newGeneCopies/ARID/ARID_partitions/ARID_group9.fasta	../firstrun/newGeneCopies/ARID/ARID_partitions/ARID_group9_ARID5A.fasta	ARID5A,
../firstrun/newGeneCopies/ZNF875/ZNF875_partitions/ZNF875_group138.fasta	../firstrun/newGeneCopies/ZNF875/ZNF875_partitions/ZNF875_group138_ZNF875OOOCTD-3162L10v1OOOCTD-3220F14v1.fasta	CTD-3220F14.1,CTD-3162L10.1,ZNF875,LINC01535,LINC00665,CTD-3220F14.2,ZNF527,CTD-3220F14.3,ZNF790-AS1,
../firstrun/newGeneCopies/RER1/RER1_partitions/RER1_group1.fasta	../firstrun/newGeneCopies/RER1/RER1_partitions/RER1_group1_RER1OOOMORN1OOOPEX10.fasta	RER1,PEX10,MORN1,
../firstrun/newGeneCopies/ANKRD36/ANKRD36_partitions/ANKRD36_group2.fasta	../firstrun/newGeneCopies/ANKRD36/ANKRD36_partitions/ANKRD36_group2_ANKRD36OOOANKRD36BOOOANKRD36BP2.fasta	ANKRD36P1,ANKRD36BP2,RP11-104C4.6,ANKRD36,AC016745.3,RP11-341D18.2,ANKRD36B,AC159540.14,LINC00342,ANKRD36C,
../firstrun/newGeneCopies/FGFBP1/FGFBP1_partitions/FGFBP1_group1.fasta	../firstrun/newGeneCopies/FGFBP1/FGFBP1_partitions/FGFBP1_group1_FGFBP1.fasta	FGFBP1,
../firstrun/newGeneCopies/OPN1LW/OPN1LW_partitions/OPN1LW_group1.fasta	../firstrun/newGeneCopies/OPN1LW/OPN1LW_partitions/OPN1LW_group1_OPN1LWOOOCH17-128G5v1OOOOPN1MW.fasta	TEX28P2,TEX28P1,OPN1MW,TEX28,CH17-128G5.1,OPN1LW,OPN1MW2,OPN1MW3,
../firstrun/newGeneCopies/SLC28A1/SLC28A1_partitions/SLC28A1_group1.fasta	../firstrun/newGeneCopies/SLC28A1/SLC28A1_partitions/SLC28A1_group1_SLC28A1OOORNU6-339POOORNU6-796P.fasta	SLC28A1,RNU6-796P,RP11-255M6.2,RP11-255M6.1,RNU6-339P,
../firstrun/newGeneCopies/RORC/RORC_partitions/RORC_group1.fasta	../firstrun/newGeneCopies/RORC/RORC_partitions/RORC_group1_RORCOOOLINGO4.fasta	LINGO4,RORC,
../firstrun/newGeneCopies/TSHB/TSHB_partitions/TSHB_group1.fasta	../firstrun/newGeneCopies/TSHB/TSHB_partitions/TSHB_group1_TSHB.fasta	TSHB,
../firstrun/newGeneCopies/GSTM1/GSTM1_partitions/GSTM1_group1.fasta	../firstrun/newGeneCopies/GSTM1/GSTM1_partitions/GSTM1_group1_GSTM1OOOAC000032v2OOOGSTM2.fasta	GSTM1,GSTM5,AC000032.2,GSTM4,GSTM2,
../firstrun/newGeneCopies/RHOU/RHOU_partitions/RHOU_group1.fasta	../firstrun/newGeneCopies/RHOU/RHOU_partitions/RHOU_group1_RHOU.fasta	RHOU,
../firstrun/newGeneCopies/F13B/F13B_partitions/F13B_group1.fasta	../firstrun/newGeneCopies/F13B/F13B_partitions/F13B_group1_F13B.fasta	F13B,
../firstrun/newGeneCopies/AMPD2/AMPD2_partitions/AMPD2_group1.fasta	../firstrun/newGeneCopies/AMPD2/AMPD2_partitions/AMPD2_group1_AMPD2OOOGNAT2OOORP5-1160K1v6.fasta	AMPD2,GNAT2,RP5-1160K1.6,
../firstrun/newGeneCopies/NAIP/NAIP_partitions/NAIP_group2.fasta	../firstrun/newGeneCopies/NAIP/NAIP_partitions/NAIP_group2_NAIPOOONAIPP1OOONAIPP2.fasta	GTF2H2,NAIPP4,NAIP,RP11-1305N21.3,RP11-1275J23.2,CH17-64J14.4,NAIPP1,RP11-1151M9.1,CH17-64J14.5,NAIPP2,GTF2H2C,RP11-1305N21.1,RP11-195E2.2,RP11-497H16.9,RP11-1151M9.2,NAIPP3,
../firstrun/newGeneCopies/CLN3/CLN3_partitions/CLN3_group3.fasta	../firstrun/newGeneCopies/CLN3/CLN3_partitions/CLN3_group3_CLN3OOOAPOBROOONPIPB7.fasta	CLN3,NPIPB7,RP11-435I10.4,RP11-231C14.10,APOBR,
../firstrun/newGeneCopies/CFB/CFB_partitions/CFB_group1.fasta	../firstrun/newGeneCopies/CFB/CFB_partitions/CFB_group1_CFBOOOC2OOOC2-AS1.fasta	XXbac-BPG116M5.17,C2-AS1,C4B-AS1,C2,CFB,CYP21A2,NELFE,
../firstrun/newGeneCopies/F7/F7_partitions/F7_group1.fasta	../firstrun/newGeneCopies/F7/F7_partitions/F7_group1_F7OOOF10.fasta	F10,F7,
../firstrun/newGeneCopies/NDUFAF8/NDUFAF8_partitions/NDUFAF8_group2.fasta	../firstrun/newGeneCopies/NDUFAF8/NDUFAF8_partitions/NDUFAF8_group2_NDUFAF8OOOAC027601v1OOOSLC38A10.fasta	AC027601.1,SLC38A10,NDUFAF8,TEPSIN,
../firstrun/newGeneCopies/CEP131/CEP131_partitions/CEP131_group1.fasta	../firstrun/newGeneCopies/CEP131/CEP131_partitions/CEP131_group1_CEP131OOORP11-455O6v2.fasta	CEP131,RP11-455O6.2,
../firstrun/newGeneCopies/SEMA6C/SEMA6C_partitions/SEMA6C_group1.fasta	../firstrun/newGeneCopies/SEMA6C/SEMA6C_partitions/SEMA6C_group1_SEMA6COOORP11-68I18v10.fasta	SEMA6C,RP11-68I18.10,
../firstrun/newGeneCopies/ZC3H12B/ZC3H12B_partitions/ZC3H12B_group11.fasta	../firstrun/newGeneCopies/ZC3H12B/ZC3H12B_partitions/ZC3H12B_group11_ZC3H12B.fasta	ZC3H12B,
../firstrun/newGeneCopies/ZC3H12B/ZC3H12B_partitions/ZC3H12B_group13.fasta	../firstrun/newGeneCopies/ZC3H12B/ZC3H12B_partitions/ZC3H12B_group13_ZC3H12BOOOAP1M2P1OOOLAS1L.fasta	AP1M2P1,ZC3H12B,LAS1L,
../firstrun/newGeneCopies/ZC3H12B/ZC3H12B_partitions/ZC3H12B_group12.fasta	../firstrun/newGeneCopies/ZC3H12B/ZC3H12B_partitions/ZC3H12B_group12_ZC3H12BOOOLAS1LOOOTLE1P1.fasta	ZC3H12B,LAS1L,TLE1P1,
../firstrun/newGeneCopies/ZNF14/ZNF14_partitions/ZNF14_group1.fasta	../firstrun/newGeneCopies/ZNF14/ZNF14_partitions/ZNF14_group1_ZNF14OOOCTC-412M14v5.fasta	ZNF14,CTC-412M14.5,
../firstrun/newGeneCopies/FPGT/FPGT_partitions/FPGT_group1.fasta	../firstrun/newGeneCopies/FPGT/FPGT_partitions/FPGT_group1_FPGTOOOFPGT-TNNI3KOOOLRRIQ3.fasta	FPGT,LRRIQ3,FPGT-TNNI3K,TNNI3K,
../firstrun/newGeneCopies/ITGA10/ITGA10_partitions/ITGA10_group1.fasta	../firstrun/newGeneCopies/ITGA10/ITGA10_partitions/ITGA10_group1_ITGA10OOOANKRD35OOOPEX11B.fasta	PEX11B,ANKRD35,RP11-315I20.3,ITGA10,
../firstrun/newGeneCopies/MFHAS1/MFHAS1_partitions/MFHAS1_group1.fasta	../firstrun/newGeneCopies/MFHAS1/MFHAS1_partitions/MFHAS1_group1_MFHAS1OOOENSG00000284943OOORNU6-682P.fasta	ENSG00000284943,RNU6-682P,MFHAS1,RP11-211C9.1,
../firstrun/newGeneCopies/GRIN1/GRIN1_partitions/GRIN1_group1.fasta	../firstrun/newGeneCopies/GRIN1/GRIN1_partitions/GRIN1_group1_GRIN1OOOLRRC26OOOMIR3621.fasta	MIR3621,GRIN1,RP11-350O14.18,LRRC26,TMEM210,
../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group7.fasta	../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group7_FBXL13OOONFE4.fasta	NFE4,FBXL13,
../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group6.fasta	../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group6_FBXL13OOOLRRC17.fasta	LRRC17,FBXL13,
../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group5.fasta	../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group5_FBXL13.fasta	FBXL13,
../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group4.fasta	../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group4_FBXL13OOORN7SKP198.fasta	FBXL13,RN7SKP198,
../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group8.fasta	../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group8_FBXL13OOOARMC10OOORP11-645N11v3.fasta	ARMC10,FBXL13,RP11-645N11.3,
../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group3.fasta	../firstrun/newGeneCopies/FBXL13/FBXL13_partitions/FBXL13_group3_FBXL13OOORNU6-1136P.fasta	RNU6-1136P,FBXL13,
../firstrun/newGeneCopies/NRN1/NRN1_partitions/NRN1_group2.fasta	../firstrun/newGeneCopies/NRN1/NRN1_partitions/NRN1_group2_NRN1LOOOCTC-479C5v10OOOEDC4.fasta	PSKH1,NRN1L,EDC4,CTC-479C5.10,
../firstrun/newGeneCopies/ADAMTS16/ADAMTS16_partitions/ADAMTS16_group1.fasta	../firstrun/newGeneCopies/ADAMTS16/ADAMTS16_partitions/ADAMTS16_group1_ADAMTS16OOOCTD-2297D10v1OOOCTD-2297D10v2.fasta	CTD-2297D10.2,ADAMTS16,CTD-2297D10.1,
../firstrun/newGeneCopies/ADAMTS16/ADAMTS16_partitions/ADAMTS16_group2.fasta	../firstrun/newGeneCopies/ADAMTS16/ADAMTS16_partitions/ADAMTS16_group2_ADAMTS16.fasta	ADAMTS16,
../firstrun/newGeneCopies/ADAMTS16/ADAMTS16_partitions/ADAMTS16_group3.fasta	../firstrun/newGeneCopies/ADAMTS16/ADAMTS16_partitions/ADAMTS16_group3_ADAMTS16.fasta	ADAMTS16,
../firstrun/newGeneCopies/SSH/SSH_partitions/SSH_group2.fasta	../firstrun/newGeneCopies/SSH/SSH_partitions/SSH_group2_SSH3OOOANKRD13D.fasta	SSH3,ANKRD13D,
../firstrun/newGeneCopies/CINP/CINP_partitions/CINP_group1.fasta	../firstrun/newGeneCopies/CINP/CINP_partitions/CINP_group1_CINPOOOTECPR2OOOZNF839.fasta	TECPR2,CINP,ZNF839,
../firstrun/newGeneCopies/SMIM27/SMIM27_partitions/SMIM27_group1.fasta	../firstrun/newGeneCopies/SMIM27/SMIM27_partitions/SMIM27_group1_SMIM27OOODFFBP1OOONDUFB6.fasta	SMIM27,DFFBP1,TOPORS,RP11-205M20.8,NDUFB6,
../firstrun/newGeneCopies/RELA/RELA_partitions/RELA_group1.fasta	../firstrun/newGeneCopies/RELA/RELA_partitions/RELA_group1_RELAOOORELA-DTOOOSIPA1.fasta	RELA-DT,SIPA1,RELA,
../firstrun/newGeneCopies/BBS/BBS_partitions/BBS_group15.fasta	../firstrun/newGeneCopies/BBS/BBS_partitions/BBS_group15_BBS1OOOCTD-3074O7v11OOOCTD-3074O7v13.fasta	ZDHHC24,CTD-3074O7.13,BBS1,CTD-3074O7.11,DPP3,
../firstrun/newGeneCopies/GATA4/GATA4_partitions/GATA4_group1.fasta	../firstrun/newGeneCopies/GATA4/GATA4_partitions/GATA4_group1_GATA4.fasta	GATA4,
../firstrun/newGeneCopies/GATA4/GATA4_partitions/GATA4_group2.fasta	../firstrun/newGeneCopies/GATA4/GATA4_partitions/GATA4_group2_GATA4.fasta	GATA4,
../firstrun/newGeneCopies/GATA4/GATA4_partitions/GATA4_group3.fasta	../firstrun/newGeneCopies/GATA4/GATA4_partitions/GATA4_group3_GATA4OOOC8orf49OOOENSG00000285217.fasta	C8orf49,ENSG00000285217,GATA4,
../firstrun/newGeneCopies/AC006486.9/AC006486.9_partitions/AC006486.9_group1.fasta	../firstrun/newGeneCopies/AC006486.9/AC006486.9_partitions/AC006486.9_group1_AC006486v9OOOAC006486v10OOOAC006486v14.fasta	GSK3A,ZNF526,AC006486.14,AC006486.10,AC006486.9,DEDD2,ERF,
../firstrun/newGeneCopies/FOXL1/FOXL1_partitions/FOXL1_group1.fasta	../firstrun/newGeneCopies/FOXL1/FOXL1_partitions/FOXL1_group1_FOXL1OOOFOXC2OOOFOXC2-AS1.fasta	FOXC2-AS1,FOXL1,FOXC2,
../firstrun/newGeneCopies/ITGAL/ITGAL_partitions/ITGAL_group1.fasta	../firstrun/newGeneCopies/ITGAL/ITGAL_partitions/ITGAL_group1_ITGALOOOAC002310v11OOOMIR4518.fasta	Y_RNA,RP11-297C4.3,RP11-297C4.2,ZNF768,RP11-297C4.1,RNU7-61P,MIR4518,AC002310.11,ITGAL,
../firstrun/newGeneCopies/ZFP30/ZFP30_partitions/ZFP30_group95.fasta	../firstrun/newGeneCopies/ZFP30/ZFP30_partitions/ZFP30_group95_ZFP30OOOCTD-2528L19v4OOOSELENOKP1.fasta	ZNF540,ZFP30,SELENOKP1,CTD-2528L19.4,ZNF781,
../firstrun/newGeneCopies/PGM5/PGM5_partitions/PGM5_group24.fasta	../firstrun/newGeneCopies/PGM5/PGM5_partitions/PGM5_group24_PGM5.fasta	PGM5,
../firstrun/newGeneCopies/PGM5/PGM5_partitions/PGM5_group048801.fasta	../firstrun/newGeneCopies/PGM5/PGM5_partitions/PGM5_group048801_PGM5OOOPGM5-AS1OOOPGM5P2.fasta	WASHC1,FRG1JP,RP11-143M1.8,PGM5P2,RP11-88I18.2,AC016745.3,PGM5P3-AS1,RP11-561O23.5,PGM5P4-AS1,BX255923.3,RP11-143M1.3,RP11-58A12.3,RP11-87H9.5,RP11-87H9.4,RP11-174M15.1,PGM5P4,PGM5-AS1,FRG1HP,PGM5,LINC01961,IGKV1OR2-108,
../firstrun/newGeneCopies/SERPINA/SERPINA_partitions/SERPINA_group9.fasta	../firstrun/newGeneCopies/SERPINA/SERPINA_partitions/SERPINA_group9_SERPINA4OOOSERPINA5OOORP11-986E7v7.fasta	SERPINA4,RP11-986E7.8,SERPINA5,RP11-986E7.7,
../firstrun/newGeneCopies/SERPINA/SERPINA_partitions/SERPINA_group8.fasta	../firstrun/newGeneCopies/SERPINA/SERPINA_partitions/SERPINA_group8_SERPINA11OOOSERPINA12OOOSERPINA9.fasta	SERPINA11,SERPINA12,RP11-349I1.2,SERPINA9,
../firstrun/newGeneCopies/ACTN4/ACTN4_partitions/ACTN4_group3.fasta	../firstrun/newGeneCopies/ACTN4/ACTN4_partitions/ACTN4_group3_ACTN4OOOCAPN12OOOCTB-186G2v4.fasta	CTB-186G2.4,CAPN12,ACTN4,
../firstrun/newGeneCopies/ZNF451/ZNF451_partitions/ZNF451_group1.fasta	../firstrun/newGeneCopies/ZNF451/ZNF451_partitions/ZNF451_group1_ZNF451OOOZNF451-AS1OOOBAG2.fasta	BAG2,ZNF451-AS1,ZNF451,KIAA1586,
../firstrun/newGeneCopies/GBA/GBA_partitions/GBA_group2.fasta	../firstrun/newGeneCopies/GBA/GBA_partitions/GBA_group2_GBAOOOGBAP1OOOABC13-48559800H2v1.fasta	ABC13-48559800H2.2,MTX1P1,ABC13-48559800H2.1,RP11-263K19.6,FAM189B,MTX1,GBA,GBAP1,RP11-263K19.8,
../firstrun/newGeneCopies/VANGL1/VANGL1_partitions/VANGL1_group1.fasta	../firstrun/newGeneCopies/VANGL1/VANGL1_partitions/VANGL1_group1_VANGL1OOOCASQ2.fasta	CASQ2,VANGL1,
../firstrun/newGeneCopies/PUSL1/PUSL1_partitions/PUSL1_group1.fasta	../firstrun/newGeneCopies/PUSL1/PUSL1_partitions/PUSL1_group1_PUSL1OOOACAP3OOOINTS11.fasta	RP5-890O3.9,MIR6727,INTS11,ACAP3,PUSL1,
../firstrun/newGeneCopies/RNF17/RNF17_partitions/RNF17_group1.fasta	../firstrun/newGeneCopies/RNF17/RNF17_partitions/RNF17_group1_RNF17OOOCENPJ.fasta	CENPJ,RNF17,
../firstrun/newGeneCopies/CCZ1/CCZ1_partitions/CCZ1_group2.fasta	../firstrun/newGeneCopies/CCZ1/CCZ1_partitions/CCZ1_group2_CCZ1OOOCCZ1BOOOAC004967v7.fasta	RSPH10B2,AC004967.7,RP5-1090P18.1,CCZ1,RSPH10B,CCZ1B,RP5-1111F22.1,OR7E38P,
../firstrun/newGeneCopies/VPS4A/VPS4A_partitions/VPS4A_group1.fasta	../firstrun/newGeneCopies/VPS4A/VPS4A_partitions/VPS4A_group1_VPS4AOOOCOG8OOOPDF.fasta	PDF,COG8,SNTB2,VPS4A,RP11-343C2.11,RP11-343C2.12,
../firstrun/newGeneCopies/DEF8/DEF8_partitions/DEF8_group1.fasta	../firstrun/newGeneCopies/DEF8/DEF8_partitions/DEF8_group1_DEF8OOOAC087499v5OOOAC087499v9.fasta	CENPBD1,AC087499.9,DEF8,AC087499.5,LINC02088,
../firstrun/newGeneCopies/STK38/STK38_partitions/STK38_group4.fasta	../firstrun/newGeneCopies/STK38/STK38_partitions/STK38_group4_STK38OOOKCTD20OOORN7SL748P.fasta	KCTD20,RN7SL748P,STK38,
../firstrun/newGeneCopies/TGFB1I1/TGFB1I1_partitions/TGFB1I1_group2.fasta	../firstrun/newGeneCopies/TGFB1I1/TGFB1I1_partitions/TGFB1I1_group2_TGFB1I1OOORP11-452L6v6.fasta	TGFB1I1,RP11-452L6.6,
../firstrun/newGeneCopies/RMDN1/RMDN1_partitions/RMDN1_group1.fasta	../firstrun/newGeneCopies/RMDN1/RMDN1_partitions/RMDN1_group1_RMDN1OOOCPNE3OOONTAN1P2.fasta	CPNE3,WWP1,RMDN1,SLC2A3P4,NTAN1P2,
../firstrun/newGeneCopies/LSM8/LSM8_partitions/LSM8_group1.fasta	../firstrun/newGeneCopies/LSM8/LSM8_partitions/LSM8_group1_LSM8.fasta	LSM8,
../firstrun/newGeneCopies/DESI2/DESI2_partitions/DESI2_group1.fasta	../firstrun/newGeneCopies/DESI2/DESI2_partitions/DESI2_group1_DESI2OOORP11-173A6v2.fasta	RP11-173A6.2,DESI2,
../firstrun/newGeneCopies/ZNF750/ZNF750_partitions/ZNF750_group1.fasta	../firstrun/newGeneCopies/ZNF750/ZNF750_partitions/ZNF750_group1_ZNF750OOOTBCD.fasta	ZNF750,TBCD,
../firstrun/newGeneCopies/CFHR/CFHR_partitions/CFHR_group6.fasta	../firstrun/newGeneCopies/CFHR/CFHR_partitions/CFHR_group6_CFHR5.fasta	CFHR5,
../firstrun/newGeneCopies/CFHR/CFHR_partitions/CFHR_group1.fasta	../firstrun/newGeneCopies/CFHR/CFHR_partitions/CFHR_group1_CFHR1OOOCFHR2OOOCFH.fasta	CFHR2,CFHR1,CFH,
../firstrun/newGeneCopies/CFHR/CFHR_partitions/CFHR_group2.fasta	../firstrun/newGeneCopies/CFHR/CFHR_partitions/CFHR_group2_CFHR3OOOCFHR4OOORP11-109P13v1.fasta	CFHR4,CFHR3,RP11-109P13.1,
../firstrun/newGeneCopies/OGT/OGT_partitions/OGT_group1.fasta	../firstrun/newGeneCopies/OGT/OGT_partitions/OGT_group1_OGTOOOGCNAOOOSOCS6P1.fasta	OGT,GCNA,SOCS6P1,TAF1,
../firstrun/newGeneCopies/FUT7/FUT7_partitions/FUT7_group1.fasta	../firstrun/newGeneCopies/FUT7/FUT7_partitions/FUT7_group1_FUT7OOOABCA2OOOC9orf139.fasta	ABCA2,RP11-229P13.27,C9orf139,FUT7,
../firstrun/newGeneCopies/LRIG2/LRIG2_partitions/LRIG2_group6.fasta	../firstrun/newGeneCopies/LRIG2/LRIG2_partitions/LRIG2_group6_LRIG2OOOLRIG2-DTOOORLIMP2.fasta	LRIG2-DT,RLIMP2,LRIG2,SLC16A1-AS1,
../firstrun/newGeneCopies/SHMT1/SHMT1_partitions/SHMT1_group2.fasta	../firstrun/newGeneCopies/SHMT1/SHMT1_partitions/SHMT1_group2_SHMT1OOOMIR6778OOOSMCR8.fasta	SMCR8,SHMT1,MIR6778,
../firstrun/newGeneCopies/CSK/CSK_partitions/CSK_group2.fasta	../firstrun/newGeneCopies/CSK/CSK_partitions/CSK_group2_CSKOOOMIR4513.fasta	CSK,MIR4513,
../firstrun/newGeneCopies/LIX1/LIX1_partitions/LIX1_group1.fasta	../firstrun/newGeneCopies/LIX1/LIX1_partitions/LIX1_group1_LIX1OOOLIX1-AS1.fasta	LIX1-AS1,LIX1,
../firstrun/newGeneCopies/NIPA/NIPA_partitions/NIPA_group7.fasta	../firstrun/newGeneCopies/NIPA/NIPA_partitions/NIPA_group7_NIPA1OOONIPA2OOOCYFIP1.fasta	NIPA1,RP11-566K19.6,RP11-566K19.5,NIPA2,WI2-2334D6.1,RP11-404K5.1,GOLGA6L7,CYFIP1,GOLGA6L2,RP11-404K5.2,PDCD6IPP2,
../firstrun/newGeneCopies/PML/PML_partitions/PML_group1.fasta	../firstrun/newGeneCopies/PML/PML_partitions/PML_group1_PMLOOORP11-941F15v2OOOSTOML1.fasta	RP11-941F15.2,PML,STOML1,
../firstrun/newGeneCopies/CTDP1/CTDP1_partitions/CTDP1_group1.fasta	../firstrun/newGeneCopies/CTDP1/CTDP1_partitions/CTDP1_group1_CTDP1OOORP11-567M16v3OOORP11-567M16v5.fasta	CTDP1,RP11-567M16.5,RP11-567M16.6,RP11-567M16.3,
../firstrun/newGeneCopies/ABCC6/ABCC6_partitions/ABCC6_group1.fasta	../firstrun/newGeneCopies/ABCC6/ABCC6_partitions/ABCC6_group1_ABCC6OOOABCC6P1OOOABCC6P2.fasta	ABCC6P2,ABCC6P1,RP11-517A5.7,RP11-457I16.2,RP11-14N9.1,ABCC6,
../firstrun/newGeneCopies/TMEM116/TMEM116_partitions/TMEM116_group3.fasta	../firstrun/newGeneCopies/TMEM116/TMEM116_partitions/TMEM116_group3_TMEM116OOOERP29OOORP1-128M12v3.fasta	SLC25A3P2,RP1-128M12.3,ERP29,TMEM116,
../firstrun/newGeneCopies/TMEM116/TMEM116_partitions/TMEM116_group2.fasta	../firstrun/newGeneCopies/TMEM116/TMEM116_partitions/TMEM116_group2_TMEM116.fasta	TMEM116,
../firstrun/newGeneCopies/TMEM116/TMEM116_partitions/TMEM116_group1.fasta	../firstrun/newGeneCopies/TMEM116/TMEM116_partitions/TMEM116_group1_TMEM116OOOADAM1B.fasta	ADAM1B,TMEM116,
../firstrun/newGeneCopies/KIR3DL1/KIR3DL1_partitions/KIR3DL1_group1.fasta	../firstrun/newGeneCopies/KIR3DL1/KIR3DL1_partitions/KIR3DL1_group1_KIR3DL1OOOCTB-61M7v1OOOENSG00000275583.fasta	ENSG00000284053,GU182354.5,GU182343.5,KIR3DL1,KIR3DL3,KIR2DS2,GU182339.6,ENSG00000284511,KIR2DL2,CTB-61M7.1,KIR2DL5B,GU182352.6,ENSG00000284101,GU182355.5,ENSG00000288389,GU182338.2,GU182351.11,KIR2DS3,KIR3DS1,GU182353.5,ENSG00000288381,ENSG00000283742,ENSG00000284225,ENSG00000283902,ENSG00000284301,ENSG00000288613,ENSG00000284580,ENSG00000284169,KIR2DS1,ENSG00000275583,GU182343.7,ENSG00000288316,KIR2DL3,GU182357.5,ENSG00000284555,GU182354.3,KIR3DP1,KIR2DP1,ENSG00000284033,KIR2DL1,GU182358.3,KIR2DS4,KIR3DL2,GU182351.6,ENSG00000283784,ENSG00000288650,GU182352.4,GU182339.12,ENSG00000283722,ENSG00000283763,ENSG00000283716,KIR2DS5,KIR2DL4,GU182347.12,KIR2DL5A,GU182360.3,
../firstrun/newGeneCopies/KIF1/KIF1_partitions/KIF1_group1.fasta	../firstrun/newGeneCopies/KIF1/KIF1_partitions/KIF1_group1_KIF1BOOOENSG00000264881OOORN7SL731P.fasta	RN7SL731P,RNU6-37P,KIF1B,RP4-736L20.4,ENSG00000264881,
../firstrun/newGeneCopies/KIF1/KIF1_partitions/KIF1_group3.fasta	../firstrun/newGeneCopies/KIF1/KIF1_partitions/KIF1_group3_KIF1A.fasta	KIF1A,
../firstrun/newGeneCopies/KIF1/KIF1_partitions/KIF1_group4.fasta	../firstrun/newGeneCopies/KIF1/KIF1_partitions/KIF1_group4_KIF1A.fasta	KIF1A,
../firstrun/newGeneCopies/HHATL/HHATL_partitions/HHATL_group1.fasta	../firstrun/newGeneCopies/HHATL/HHATL_partitions/HHATL_group1_HHATLOOOHHATL-AS1OOOCCDC13.fasta	HHATL,RP4-613B23.5,HHATL-AS1,KLHL40,CCDC13,RP4-613B23.6,
../firstrun/newGeneCopies/LNX2/LNX2_partitions/LNX2_group2.fasta	../firstrun/newGeneCopies/LNX2/LNX2_partitions/LNX2_group2_LNX2OOOPOLR1D.fasta	POLR1D,LNX2,
../firstrun/newGeneCopies/LNX2/LNX2_partitions/LNX2_group1.fasta	../firstrun/newGeneCopies/LNX2/LNX2_partitions/LNX2_group1_LNX2.fasta	LNX2,
../firstrun/newGeneCopies/SEMA7A/SEMA7A_partitions/SEMA7A_group1.fasta	../firstrun/newGeneCopies/SEMA7A/SEMA7A_partitions/SEMA7A_group1_SEMA7AOOOCTD-2311M21v6OOOMIR6881.fasta	SEMA7A,CTD-2311M21.6,MIR6881,
../firstrun/newGeneCopies/CFAP410/CFAP410_partitions/CFAP410_group1.fasta	../firstrun/newGeneCopies/CFAP410/CFAP410_partitions/CFAP410_group1_CFAP410OOOAP001062v7OOOAP001062v8.fasta	AP001062.8,PFKL,CFAP410,AP001062.9,AP001062.7,
../firstrun/newGeneCopies/CALY/CALY_partitions/CALY_group1.fasta	../firstrun/newGeneCopies/CALY/CALY_partitions/CALY_group1_CALYOOOZNF511-PRAP1.fasta	ZNF511-PRAP1,CALY,
../firstrun/newGeneCopies/ZNF813/ZNF813_partitions/ZNF813_group21.fasta	../firstrun/newGeneCopies/ZNF813/ZNF813_partitions/ZNF813_group21_ZNF813OOOCTD-2224J9v11OOOCTD-2224J9v4.fasta	CTD-2224J9.4,ZNF761,CTD-2224J9.11,ZNF813,ZNF525,TPM3P9,ZNF765,RPL39P36,TPM3P6,
../firstrun/newGeneCopies/FGFBP2/FGFBP2_partitions/FGFBP2_group1.fasta	../firstrun/newGeneCopies/FGFBP2/FGFBP2_partitions/FGFBP2_group1_FGFBP2OOOPROM1.fasta	PROM1,FGFBP2,
../firstrun/newGeneCopies/DHRS9/DHRS9_partitions/DHRS9_group1.fasta	../firstrun/newGeneCopies/DHRS9/DHRS9_partitions/DHRS9_group1_DHRS9.fasta	DHRS9,
../firstrun/newGeneCopies/APH1A/APH1A_partitions/APH1A_group1.fasta	../firstrun/newGeneCopies/APH1A/APH1A_partitions/APH1A_group1_APH1AOOOC1orf54OOOCA14.fasta	APH1A,CA14,C1orf54,
../firstrun/newGeneCopies/ZNF446/ZNF446_partitions/ZNF446_group1.fasta	../firstrun/newGeneCopies/ZNF446/ZNF446_partitions/ZNF446_group1_ZNF446OOOCTD-2619J13v23OOORNU6-1337P.fasta	ZNF324,RNU6-1337P,CTD-2619J13.23,SLC27A5,ZNF446,
../firstrun/newGeneCopies/ANAPC1/ANAPC1_partitions/ANAPC1_group1.fasta	../firstrun/newGeneCopies/ANAPC1/ANAPC1_partitions/ANAPC1_group1_ANAPC1OOOANAPC1P1OOOANAPC1P2.fasta	CD8B,AC009963.4,RP11-1378G18.3,AC083899.3,MIR4771-1,ANAPC1P4,AC114755.5,ANAPC1P6,RPL34P8,RP11-1252D15.1,AC093166.4,RP1-81D8.3,AC017002.4,CENPNP1,RGPD3,RGPD1,RP11-68E19.2,PLG,LINC01955,AC111200.2,AC009963.3,EEF1E1P1,MIR4771-2,ANAPC1P1,AC084149.1,ANAPC1P3,AC084149.2,ANAPC1P2,RP11-431O23.1,ANAPC1P5,CENPNP2,RP11-803D5.5,AC108868.3,RP13-511M20.1,AC093166.2,ANAPC1,CD8B2,
../firstrun/newGeneCopies/LRRC27/LRRC27_partitions/LRRC27_group1.fasta	../firstrun/newGeneCopies/LRRC27/LRRC27_partitions/LRRC27_group1_LRRC27OOOSTK32C.fasta	STK32C,LRRC27,
../firstrun/newGeneCopies/PDLIM7/PDLIM7_partitions/PDLIM7_group1.fasta	../firstrun/newGeneCopies/PDLIM7/PDLIM7_partitions/PDLIM7_group1_PDLIM7OOORP11-1334A24v6.fasta	RP11-1334A24.6,PDLIM7,
../firstrun/newGeneCopies/RP11-435I10.4/RP11-435I10.4_partitions/RP11-435I10.4_group00101.fasta	../firstrun/newGeneCopies/RP11-435I10.4/RP11-435I10.4_partitions/RP11-435I10.4_group00101_RP11-435I10v4OOOAC138969v4OOOAPOBR.fasta	RP11-680G24.7,RP11-82O18.2,PKD1P6-NPIPP1,NPIPB7,NPIPA2,RP11-72I8.2,RP11-347C12.8,NPIPB10P,RP11-166B2.9,PKD1P1,RP11-645C24.6,CH17-32G2.1,ENSG00000283738,RP11-231C14.10,NPIPB11,NPIPA5,RP11-677O4.6,RP11-57A19.4,RP11-677O4.5,RP11-57A19.6,RP11-231C14.5,CTD-2547E10.5,PDXDC1,RP11-467M13.2,PDXDC2P-NPIPB14P,RP11-719K4.6,AC138969.4,NPIPP1,RP11-435I10.4,RP11-1212A22.7,PKD1P6,RP11-680G24.1,NPIPB1P,NPIPA8,RP11-368J21.4,RP11-435I10.5,RP11-1348G14.7,RP11-231C14.8,APOBR,NPIPB6,CTB-134H23.3,NPIPB12,CH17-5A7.1,RP11-958N24.4,RP11-252A24.8,SLC35G4,RP11-1212A22.9,RP11-1212A22.8,RP11-1348G14.6,NPIPA7,RP11-345J4.11,NPIPA9,RP11-57A19.5,NPIPB4,NPIPB14P,RP11-435I10.6,NPIPB9,NPIPB13,RP11-72I8.1,NPIPA1,NPIPB3,CLN3,RP11-419C5.3,NPIPB15,ENSG00000277983,NPIPB5,NPIPB8,NPIPA3,NPIPB2,RP11-719K4.3,
../firstrun/newGeneCopies/KRTAP1-1/KRTAP1-1_partitions/KRTAP1-1_group1.fasta	../firstrun/newGeneCopies/KRTAP1-1/KRTAP1-1_partitions/KRTAP1-1_group1_KRTAP1-1OOOKRTAP1-3OOOKRTAP1-4.fasta	KRTAP1-4,KRTAP1-3,KRTAP1-1,
../firstrun/newGeneCopies/MRPL52/MRPL52_partitions/MRPL52_group1.fasta	../firstrun/newGeneCopies/MRPL52/MRPL52_partitions/MRPL52_group1_MRPL52OOOMMP14OOOSLC7A7.fasta	MMP14,SLC7A7,MRPL52,
../firstrun/newGeneCopies/ABTB1/ABTB1_partitions/ABTB1_group1.fasta	../firstrun/newGeneCopies/ABTB1/ABTB1_partitions/ABTB1_group1_ABTB1OOOPODXL2.fasta	ABTB1,PODXL2,
../firstrun/newGeneCopies/MZT2A/MZT2A_partitions/MZT2A_group1.fasta	../firstrun/newGeneCopies/MZT2A/MZT2A_partitions/MZT2A_group1_MZT2AOOOAC018804v6OOOMIR4784.fasta	TUBA3E,RP11-109E12.1,AC018804.6,TUBA3D,SMPD4,SMPD4BP,PIGF,RHOQP2,MIR4784,MZT2B,RHOQ,RHOQP3,RHOQ-AS1,MZT2A,
../firstrun/newGeneCopies/PHOX2A/PHOX2A_partitions/PHOX2A_group1.fasta	../firstrun/newGeneCopies/PHOX2A/PHOX2A_partitions/PHOX2A_group1_PHOX2AOOOAP000593v5OOOINPPL1.fasta	AP000593.5,PHOX2A,INPPL1,
../firstrun/newGeneCopies/RTF2/RTF2_partitions/RTF2_group1.fasta	../firstrun/newGeneCopies/RTF2/RTF2_partitions/RTF2_group1_RTF2OOOFAM209AOOOGCNT7.fasta	RTF2,GCNT7,FAM209A,RP5-1153D9.5,
../firstrun/newGeneCopies/MICB/MICB_partitions/MICB_group2.fasta	../firstrun/newGeneCopies/MICB/MICB_partitions/MICB_group2_MICBOOOMICB-DTOOOHCP5.fasta	XXbac-BPG181B23.7,HCP5,MICB-DT,MICB,MICA,XXbac-BPG181B23.9,Y_RNA,
../firstrun/newGeneCopies/TUFT1/TUFT1_partitions/TUFT1_group1.fasta	../firstrun/newGeneCopies/TUFT1/TUFT1_partitions/TUFT1_group1_TUFT1OOOCGNOOOMIR554.fasta	MIR554,RP11-74C1.4,RP11-74C1.2,CGN,TUFT1,
../firstrun/newGeneCopies/RP11-15H20.8/RP11-15H20.8_partitions/RP11-15H20.8_group4.fasta	../firstrun/newGeneCopies/RP11-15H20.8/RP11-15H20.8_partitions/RP11-15H20.8_group4_RP11-15H20v8OOOBNIP3P38OOOIPO5P1.fasta	RP11-15H20.6,ZNF724,RP11-15H20.7,IPO5P1,RP11-15H20.8,BNIP3P38,
../firstrun/newGeneCopies/PDLIM3/PDLIM3_partitions/PDLIM3_group1.fasta	../firstrun/newGeneCopies/PDLIM3/PDLIM3_partitions/PDLIM3_group1_PDLIM3OOORP11-279O9v4.fasta	RP11-279O9.4,PDLIM3,
../firstrun/newGeneCopies/MYBPHL/MYBPHL_partitions/MYBPHL_group1.fasta	../firstrun/newGeneCopies/MYBPHL/MYBPHL_partitions/MYBPHL_group1_MYBPHLOOOSORT1.fasta	MYBPHL,SORT1,
../firstrun/newGeneCopies/LCN6/LCN6_partitions/LCN6_group1.fasta	../firstrun/newGeneCopies/LCN6/LCN6_partitions/LCN6_group1_LCN6OOOLCN10OOOMIR6722.fasta	LCN6,MIR6722,LCN10,RP11-216L13.16,
../firstrun/newGeneCopies/TACSTD2/TACSTD2_partitions/TACSTD2_group1.fasta	../firstrun/newGeneCopies/TACSTD2/TACSTD2_partitions/TACSTD2_group1_TACSTD2.fasta	TACSTD2,
../firstrun/newGeneCopies/IER3IP1/IER3IP1_partitions/IER3IP1_group1.fasta	../firstrun/newGeneCopies/IER3IP1/IER3IP1_partitions/IER3IP1_group1_IER3IP1OOOHDHD2OOORP11-49K24v6.fasta	IER3IP1,HDHD2,RP11-49K24.6,
../firstrun/newGeneCopies/C20orf/C20orf_partitions/C20orf_group9.fasta	../firstrun/newGeneCopies/C20orf/C20orf_partitions/C20orf_group9_C20orf203OOORP11-503P21v4.fasta	C20orf203,RP11-503P21.4,
../firstrun/newGeneCopies/C20orf/C20orf_partitions/C20orf_group1.fasta	../firstrun/newGeneCopies/C20orf/C20orf_partitions/C20orf_group1_C20orf96OOORP5-1103G7v10.fasta	RP5-1103G7.10,C20orf96,
../firstrun/newGeneCopies/TSPAN3/TSPAN3_partitions/TSPAN3_group1.fasta	../firstrun/newGeneCopies/TSPAN3/TSPAN3_partitions/TSPAN3_group1_TSPAN3OOORP11-797A18v3OOORP11-797A18v5.fasta	RP11-797A18.6,TSPAN3,RP11-797A18.3,RP11-797A18.5,
../firstrun/newGeneCopies/STXBP2/STXBP2_partitions/STXBP2_group1.fasta	../firstrun/newGeneCopies/STXBP2/STXBP2_partitions/STXBP2_group1_STXBP2OOOCTD-3214H19v4OOOCTD-3214H19v6.fasta	CTD-3214H19.4,STXBP2,CTD-3214H19.6,
../firstrun/newGeneCopies/THEM5/THEM5_partitions/THEM5_group1.fasta	../firstrun/newGeneCopies/THEM5/THEM5_partitions/THEM5_group1_THEM5OOOC2CD4D-AS1.fasta	C2CD4D-AS1,THEM5,
../firstrun/newGeneCopies/MZF1/MZF1_partitions/MZF1_group1.fasta	../firstrun/newGeneCopies/MZF1/MZF1_partitions/MZF1_group1_MZF1OOOMZF1-AS1OOOCENPBD1P1.fasta	LLNLR-271E8.1,UBE2M,MZF1,CENPBD1P1,MZF1-AS1,
../firstrun/newGeneCopies/TEX13A/TEX13A_partitions/TEX13A_group1.fasta	../firstrun/newGeneCopies/TEX13A/TEX13A_partitions/TEX13A_group1_TEX13AOOOIL1RAPL2.fasta	IL1RAPL2,TEX13A,
../firstrun/newGeneCopies/TARM1/TARM1_partitions/TARM1_group1.fasta	../firstrun/newGeneCopies/TARM1/TARM1_partitions/TARM1_group1_TARM1.fasta	TARM1,
../firstrun/newGeneCopies/DXO/DXO_partitions/DXO_group1.fasta	../firstrun/newGeneCopies/DXO/DXO_partitions/DXO_group1_DXOOOOCYP21A2OOODAQB-331I12v15.fasta	STK19,CYP21A2,DAQB-331I12.15,SKIV2L,DXO,
../firstrun/newGeneCopies/MORN1/MORN1_partitions/MORN1_group1.fasta	../firstrun/newGeneCopies/MORN1/MORN1_partitions/MORN1_group1_MORN1OOORER1OOORP11-181G12v8.fasta	MORN1,RP4-740C4.5,RP4-713A8.1,RP11-181G12.8,RER1,RP4-740C4.7,
../firstrun/newGeneCopies/RFX2/RFX2_partitions/RFX2_group1.fasta	../firstrun/newGeneCopies/RFX2/RFX2_partitions/RFX2_group1_RFX2OOOACSBG2OOOCTB-66B24v1.fasta	RFX2,CTC-232P5.4,RANBP3-DT,CTC-232P5.3,CTC-503J8.2,CTC-503J8.9,ACSBG2,CTB-66B24.1,
../firstrun/newGeneCopies/IRF8/IRF8_partitions/IRF8_group1.fasta	../firstrun/newGeneCopies/IRF8/IRF8_partitions/IRF8_group1_IRF8OOOMIR6774OOORP11-542M13v4.fasta	IRF8,RP11-542M13.4,MIR6774,
../firstrun/newGeneCopies/EIF3K/EIF3K_partitions/EIF3K_group20.fasta	../firstrun/newGeneCopies/EIF3K/EIF3K_partitions/EIF3K_group20_EIF3KOOOMAP4K1.fasta	EIF3K,MAP4K1,
../firstrun/newGeneCopies/MPG/MPG_partitions/MPG_group1.fasta	../firstrun/newGeneCopies/MPG/MPG_partitions/MPG_group1_MPGOOONPRL3OOORHBDF1.fasta	NPRL3,Z69720.3,MPG,RHBDF1,
../firstrun/newGeneCopies/RNASET2/RNASET2_partitions/RNASET2_group1.fasta	../firstrun/newGeneCopies/RNASET2/RNASET2_partitions/RNASET2_group1_RNASET2OOORP11-514O12v4.fasta	RP11-514O12.4,RNASET2,
../firstrun/newGeneCopies/SLC27A4/SLC27A4_partitions/SLC27A4_group1.fasta	../firstrun/newGeneCopies/SLC27A4/SLC27A4_partitions/SLC27A4_group1_SLC27A4OOOTMSB4XP4.fasta	SLC27A4,TMSB4XP4,
../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group32.fasta	../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group32_OR2T10OOORP11-438F14v10OOOY_RNA.fasta	RP11-438F14.10,OR2T10,Y_RNA,
../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group29.fasta	../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group29_OR2T1OOOOR2T11OOOOR2T2.fasta	OR2T7,OR2T35,OR2T27,OR2T2,OR2T1,OR2T11,OR2T6,
../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group80.fasta	../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group80_OR2A1OOOOR2A1-AS1OOOOR2A20P.fasta	CTAGE15,OR2A20P,ENSG00000285154,ENPP3,ENSG00000285362,ENSG00000285059,OR2AO1P,OR2A4,OR2A1,CTAGE8,ENSG00000284827,OR2A9P,RP4-798C17.7,RNU6-267P,OR2A42,CTAGE6,ARHGEF35,RNU6-162P,ARHGEF5,CTAGE9,AC073264.6,ARHGEF35-AS1,ENSG00000285013,CTAGE4,OR2A1-AS1,OR2A7,ENSG00000284912,
../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group143.fasta	../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group143_OR2Z1OOORPL23AP78.fasta	RPL23AP78,OR2Z1,
../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group69.fasta	../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group69_OR2B3OOOOR2J1OOOOR2J2.fasta	OR2J4P,OR2B3,OR2J1,OR2J3,OR2J2,
../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group31.fasta	../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group31_OR2AS1POOOOR2AS2POOOOR2G6.fasta	OR2AS2P,OR2T34,OR2T3,RP11-438F14.3,OR2AS1P,RP11-407H12.8,OR2T29,OR2G6,OR2T5,
../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group93.fasta	../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group93_OR2A12OOOOR2A13POOOOR2A14.fasta	OR2A14,OR2A12,OR2A13P,OR2A15P,OR2A5,OR2A2,OR2A25,OR2A3P,OR2A41P,
../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group92.fasta	../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group92_OR2F1OOOOR2Q1POOOCAPZA1P5.fasta	CAPZA1P5,SLC16A1P1,OR2F1,OR2Q1P,
../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group58.fasta	../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group58_OR2V1OOOOR2V2.fasta	OR2V2,OR2V1,
../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group91.fasta	../firstrun/newGeneCopies/OR2/OR2_partitions/OR2_group91_OR2F2.fasta	OR2F2,
../firstrun/newGeneCopies/SPDEF/SPDEF_partitions/SPDEF_group1.fasta	../firstrun/newGeneCopies/SPDEF/SPDEF_partitions/SPDEF_group1_SPDEFOOOPACSIN1.fasta	PACSIN1,SPDEF,
../firstrun/newGeneCopies/TRAFD1/TRAFD1_partitions/TRAFD1_group1.fasta	../firstrun/newGeneCopies/TRAFD1/TRAFD1_partitions/TRAFD1_group1_TRAFD1OOOY_RNA.fasta	Y_RNA,TRAFD1,
../firstrun/newGeneCopies/FAM214/FAM214_partitions/FAM214_group2.fasta	../firstrun/newGeneCopies/FAM214/FAM214_partitions/FAM214_group2_FAM214BOOOSTOML2.fasta	STOML2,FAM214B,
../firstrun/newGeneCopies/UBL7/UBL7_partitions/UBL7_group132.fasta	../firstrun/newGeneCopies/UBL7/UBL7_partitions/UBL7_group132_UBL7OOOUBL7-AS1OOOENSG00000288276.fasta	UBL7-AS1,RP11-10O17.1,ENSG10010135848.2,ENSG00000288341,ENSG00000288276,RP11-10O17.3,UBL7,
../firstrun/newGeneCopies/TRGC1/TRGC1_partitions/TRGC1_group1.fasta	../firstrun/newGeneCopies/TRGC1/TRGC1_partitions/TRGC1_group1_TRGC1OOOTRGC2OOOTRGJ1.fasta	TRGC2,TRGJP1,TRGJ1,TRGC1,TRGJ2,TRGJP,TRGJP2,
../firstrun/newGeneCopies/REM2/REM2_partitions/REM2_group1.fasta	../firstrun/newGeneCopies/REM2/REM2_partitions/REM2_group1_REM2OOOLRP10.fasta	LRP10,REM2,
../firstrun/newGeneCopies/CTC-479C5.12/CTC-479C5.12_partitions/CTC-479C5.12_group1.fasta	../firstrun/newGeneCopies/CTC-479C5.12/CTC-479C5.12_partitions/CTC-479C5.12_group1_CTC-479C5v12OOOCTRLOOOPSKH1.fasta	CTC-479C5.12,PSKH1,PSMB10,CTRL,
../firstrun/newGeneCopies/MAP2/MAP2_partitions/MAP2_group20.fasta	../firstrun/newGeneCopies/MAP2/MAP2_partitions/MAP2_group20_MAP2K3OOOABC13-47656900H15v1.fasta	MAP2K3,ABC13-47656900H15.1,
../firstrun/newGeneCopies/CD19/CD19_partitions/CD19_group1.fasta	../firstrun/newGeneCopies/CD19/CD19_partitions/CD19_group1_CD19OOORABEP2OOORP11-231C14v10.fasta	RABEP2,RP11-231C14.10,CD19,
../firstrun/newGeneCopies/ODF2L/ODF2L_partitions/ODF2L_group2.fasta	../firstrun/newGeneCopies/ODF2L/ODF2L_partitions/ODF2L_group2_ODF2LOOOMIR7856.fasta	ODF2L,MIR7856,
../firstrun/newGeneCopies/RP11-514P8.7/RP11-514P8.7_partitions/RP11-514P8.7_group2.fasta	../firstrun/newGeneCopies/RP11-514P8.7/RP11-514P8.7_partitions/RP11-514P8.7_group2_RP11-514P8v7OOOAC004951v5OOOAC004951v6.fasta	PMS2P3,POLR2J,SPDYE13,UPK3B,SPDYE10P,RP11-514P8.10,AC004951.5,CH17-264B6.6,SPDYE14,PMS2P4,POLR2J4,SPDYE1,SPDYE14P,SPDYE11,SPDYE16,SPDYE18,SPDYE2,PMS2P8,SPDYE12P,RASA4B,SPDYE15,SPDYE9,SPDYE6,SPDYE5,RASA4CP,CH17-264B6.3,POLR2J3,UPK3BL1,SPDYE21,RP11-577H5.5,CH17-264B6.1,PMS2P1,RP11-514P8.7,RP5-1022I14.2,PMS2P6,SPDYE13P,PMS2P10,LINC00957,PMS2P2,AC093668.2,SPDYE2B,SPDYE15P,RP5-1165K10.2,RP11-467H10.2,SPDYE8,PMS2P7,POLR2J2,DTX2P1-UPK3BP1-PMS2P11,AC004980.9,RASA4,SPDYE17,RP11-514P8.6,RASA4DP,UPK3BL2,AC004951.6,SPDYE7P,SPDYE3,
../firstrun/newGeneCopies/GRAP/GRAP_partitions/GRAP_group2.fasta	../firstrun/newGeneCopies/GRAP/GRAP_partitions/GRAP_group2_GRAPOOOGRAPLOOOGRAPLDR.fasta	AC007952.5,RP11-160E2.21,CTC-457L16.2,RP11-744A16.4,GRAP,GRAPLDR,GRAPL,AC007952.4,KYNUP1,SLC5A10,RP11-160E2.16,KYNUP3,RP11-160E2.17,KYNUP2,RP11-160E2.19,AC007952.6,EPN2,CTC-457L16.1,
../firstrun/newGeneCopies/XAGE3/XAGE3_partitions/XAGE3_group1.fasta	../firstrun/newGeneCopies/XAGE3/XAGE3_partitions/XAGE3_group1_XAGE3OOORP11-167P23v2.fasta	RP11-167P23.2,XAGE3,
../firstrun/newGeneCopies/IL2RG/IL2RG_partitions/IL2RG_group1.fasta	../firstrun/newGeneCopies/IL2RG/IL2RG_partitions/IL2RG_group1_IL2RGOOOCXorf65OOOFOXO4.fasta	FOXO4,IL2RG,RP5-1091N2.12,CXorf65,
../firstrun/newGeneCopies/PRKDC/PRKDC_partitions/PRKDC_group2.fasta	../firstrun/newGeneCopies/PRKDC/PRKDC_partitions/PRKDC_group2_PRKDCOOOMCM4OOORP11-113H14v3.fasta	RP11-113H14.3,Y_RNA,PRKDC,MCM4,
../firstrun/newGeneCopies/CIART/CIART_partitions/CIART_group1.fasta	../firstrun/newGeneCopies/CIART/CIART_partitions/CIART_group1_CIARTOOOC1orf54.fasta	CIART,C1orf54,
../firstrun/newGeneCopies/DDX51/DDX51_partitions/DDX51_group1.fasta	../firstrun/newGeneCopies/DDX51/DDX51_partitions/DDX51_group1_DDX51OOONOC4L.fasta	DDX51,NOC4L,
../firstrun/newGeneCopies/TEX37/TEX37_partitions/TEX37_group1.fasta	../firstrun/newGeneCopies/TEX37/TEX37_partitions/TEX37_group1_TEX37.fasta	TEX37,
../firstrun/newGeneCopies/LRRIQ3/LRRIQ3_partitions/LRRIQ3_group5.fasta	../firstrun/newGeneCopies/LRRIQ3/LRRIQ3_partitions/LRRIQ3_group5_LRRIQ3OOOFPGTOOOFPGT-TNNI3K.fasta	FPGT,LRRIQ3,FPGT-TNNI3K,
../firstrun/newGeneCopies/LRRIQ3/LRRIQ3_partitions/LRRIQ3_group4.fasta	../firstrun/newGeneCopies/LRRIQ3/LRRIQ3_partitions/LRRIQ3_group4_LRRIQ3.fasta	LRRIQ3,
../firstrun/newGeneCopies/LRRIQ3/LRRIQ3_partitions/LRRIQ3_group1.fasta	../firstrun/newGeneCopies/LRRIQ3/LRRIQ3_partitions/LRRIQ3_group1_LRRIQ3.fasta	LRRIQ3,
../firstrun/newGeneCopies/LRRIQ3/LRRIQ3_partitions/LRRIQ3_group3.fasta	../firstrun/newGeneCopies/LRRIQ3/LRRIQ3_partitions/LRRIQ3_group3_LRRIQ3.fasta	LRRIQ3,
../firstrun/newGeneCopies/LRRIQ3/LRRIQ3_partitions/LRRIQ3_group2.fasta	../firstrun/newGeneCopies/LRRIQ3/LRRIQ3_partitions/LRRIQ3_group2_LRRIQ3.fasta	LRRIQ3,
../firstrun/newGeneCopies/RNF224/RNF224_partitions/RNF224_group1.fasta	../firstrun/newGeneCopies/RNF224/RNF224_partitions/RNF224_group1_RNF224OOOCYSRT1OOORNF208.fasta	RNF208,CYSRT1,RNF224,SLC34A3,
../firstrun/newGeneCopies/SYT15/SYT15_partitions/SYT15_group1.fasta	../firstrun/newGeneCopies/SYT15/SYT15_partitions/SYT15_group1_SYT15OOOABC7-42404400C24v1OOONUTM2A-AS1.fasta	RP11-322M19.5,RP11-322M19.4,ABC7-42404400C24.1,NUTM2A-AS1,SYT15,RP11-38L15.3,
../firstrun/newGeneCopies/RFLNB/RFLNB_partitions/RFLNB_group1.fasta	../firstrun/newGeneCopies/RFLNB/RFLNB_partitions/RFLNB_group1_RFLNB.fasta	RFLNB,
../firstrun/newGeneCopies/TAF1/TAF1_partitions/TAF1_group11.fasta	../firstrun/newGeneCopies/TAF1/TAF1_partitions/TAF1_group11_TAF1OOOTAF1LOOOAL590762v10.fasta	TAF1L,PABPN1P1,Metazoa_SRP,RP11-555J4.4,RHOG2P,AL590762.10,TAF1,
../firstrun/newGeneCopies/TAF1/TAF1_partitions/TAF1_group32.fasta	../firstrun/newGeneCopies/TAF1/TAF1_partitions/TAF1_group32_TAF1OOOINGXOOOOGT.fasta	Y_RNA,INGX,OGT,TAF1,SOCS6P1,
../firstrun/newGeneCopies/HYAL1/HYAL1_partitions/HYAL1_group1.fasta	../firstrun/newGeneCopies/HYAL1/HYAL1_partitions/HYAL1_group1_HYAL1OOOHYAL3OOONAA80.fasta	HYAL1,HYAL3,NAA80,
../firstrun/newGeneCopies/WDR11/WDR11_partitions/WDR11_group54.fasta	../firstrun/newGeneCopies/WDR11/WDR11_partitions/WDR11_group54_WDR11OOOWDR11-AS1OOORP11-323P17v2.fasta	RP11-323P17.2,RP11-95I16.4,RP11-323P17.3,WDR11,WDR11-AS1,
../firstrun/newGeneCopies/FBXO4/FBXO4_partitions/FBXO4_group1.fasta	../firstrun/newGeneCopies/FBXO4/FBXO4_partitions/FBXO4_group1_FBXO4.fasta	FBXO4,
../firstrun/newGeneCopies/LRRC37/LRRC37_partitions/LRRC37_group12.fasta	../firstrun/newGeneCopies/LRRC37/LRRC37_partitions/LRRC37_group12_LRRC37AOOOLRRC37A11POOOLRRC37A16P.fasta	LRRC37BP1,RN7SL656P,RP11-927P21.8,RP11-927P21.2,RP11-271K11.5,RP11-640N20.1,LRRC37A17P,LRRC37A,CTD-2206N4.5,RDM1P3,RDM1P2,RP11-57A24.2,RP11-619A10.1,AC005562.1,RP11-707O23.6,RN7SL199P,SH3GL1P3,DND1P1,RP11-156P1.3,RP11-1070B7.2,RP11-640N20.6,RDM1P4,MAPK8IP1P1,RP11-640N20.4,ARL17A,RP11-147L13.12,RP11-707O23.1,RP11-156P1.2,RP11-147L13.11,RP11-527L4.9,RPRML,RP11-798G7.6,RP11-583F2.1,RP11-798G7.5,CTD-2206N4.1,FAM215A,RP11-640N20.8,LINC02079,RN7SL270P,RP11-147L13.13,RP11-271K11.6,RP11-848P1.9,LRRC37A4P,ARL17B,LRRC37A2,LRRC37B,LRRC37A3,RP11-927P21.9,LRRC37A11P,SH3GL1P2,Metazoa_SRP,RP11-798G7.8,RP11-527L4.6,LRRC37A16P,RP11-927P21.1,GOSR2,RN7SL404P,SH3GL1P1,RDM1P1,NSFP1,RP11-640N20.5,RP11-527L4.5,RP11-798G7.7,
../firstrun/newGeneCopies/TRIM43B/TRIM43B_partitions/TRIM43B_group1.fasta	../firstrun/newGeneCopies/TRIM43B/TRIM43B_partitions/TRIM43B_group1_TRIM43BOOOAC009237v13OOOAC009237v2.fasta	TRIM43CP,TRIM43B,AC009237.13,AC009237.4,AC009237.2,RP11-440D17.5,TRIM43,AC018892.8,AC018892.3,
../firstrun/newGeneCopies/GNAL/GNAL_partitions/GNAL_group2.fasta	../firstrun/newGeneCopies/GNAL/GNAL_partitions/GNAL_group2_GNALOOOASNSP6OOORP11-677O4v8.fasta	GNAL,ASNSP6,RP11-677O4.8,
../firstrun/newGeneCopies/GNAL/GNAL_partitions/GNAL_group3.fasta	../firstrun/newGeneCopies/GNAL/GNAL_partitions/GNAL_group3_GNALOOORP11-78A19v2.fasta	RP11-78A19.2,GNAL,
../firstrun/newGeneCopies/GNAL/GNAL_partitions/GNAL_group1.fasta	../firstrun/newGeneCopies/GNAL/GNAL_partitions/GNAL_group1_GNAL.fasta	GNAL,
../firstrun/newGeneCopies/GNAL/GNAL_partitions/GNAL_group4.fasta	../firstrun/newGeneCopies/GNAL/GNAL_partitions/GNAL_group4_GNALOOOCHMP1BOOOCHMP1B-AS1.fasta	MPPE1,CHMP1B,GNAL,CHMP1B-AS1,RP11-78A19.4,
../firstrun/newGeneCopies/FAM216/FAM216_partitions/FAM216_group2.fasta	../firstrun/newGeneCopies/FAM216/FAM216_partitions/FAM216_group2_FAM216B.fasta	FAM216B,
../firstrun/newGeneCopies/ABR/ABR_partitions/ABR_group8.fasta	../firstrun/newGeneCopies/ABR/ABR_partitions/ABR_group8_ABROOOAC016292v1OOOMIR3183.fasta	ABR,AC016292.1,RP11-216P6.2,Metazoa_SRP,MIR3183,TRARG1,TIMM22,
../firstrun/newGeneCopies/ARNT/ARNT_partitions/ARNT_group1.fasta	../firstrun/newGeneCopies/ARNT/ARNT_partitions/ARNT_group1_ARNTOOOCTSKOOORNU6-1309P.fasta	RNU6-1309P,UBE2D3P3,CTSK,ARNT,
../firstrun/newGeneCopies/DOK7/DOK7_partitions/DOK7_group1.fasta	../firstrun/newGeneCopies/DOK7/DOK7_partitions/DOK7_group1_DOK7OOOLRPAP1.fasta	LRPAP1,DOK7,
../firstrun/newGeneCopies/FOXO3/FOXO3_partitions/FOXO3_group1.fasta	../firstrun/newGeneCopies/FOXO3/FOXO3_partitions/FOXO3_group1_FOXO3OOOFOXO3BOOOAC005324v8.fasta	ZNF286B,AC005324.8,FOXO3B,ZNF286A,UBE2SP2,SUMO2P8,RP3-466I7.2,AC026271.3,UBE2SP1,FOXO3,
../firstrun/newGeneCopies/SAPCD/SAPCD_partitions/SAPCD_group7.fasta	../firstrun/newGeneCopies/SAPCD/SAPCD_partitions/SAPCD_group7_SAPCD2OOORP11-229P13v22OOORP11-229P13v23.fasta	RP11-229P13.22,SAPCD2,RP11-229P13.23,
../firstrun/newGeneCopies/SAPCD/SAPCD_partitions/SAPCD_group1.fasta	../firstrun/newGeneCopies/SAPCD/SAPCD_partitions/SAPCD_group1_MSH5-SAPCD1OOOSAPCD1OOOSAPCD1-AS1.fasta	MSH5-SAPCD1,MSH5,SAPCD1,VWA7,SAPCD1-AS1,U6,
../firstrun/newGeneCopies/IGHV3-21/IGHV3-21_partitions/IGHV3-21_group2.fasta	../firstrun/newGeneCopies/IGHV3-21/IGHV3-21_partitions/IGHV3-21_group2_IGHV3-21.fasta	IGHV3-21,
../firstrun/newGeneCopies/MCRIP2/MCRIP2_partitions/MCRIP2_group2.fasta	../firstrun/newGeneCopies/MCRIP2/MCRIP2_partitions/MCRIP2_group2_MCRIP2OOOAL022341v3OOOMETTL26.fasta	WFIKKN1,WDR90,MCRIP2,METTL26,AL022341.3,
../firstrun/newGeneCopies/PRPF4/PRPF4_partitions/PRPF4_group2.fasta	../firstrun/newGeneCopies/PRPF4/PRPF4_partitions/PRPF4_group2_PRPF4OOOCDC26.fasta	CDC26,PRPF4,
../firstrun/newGeneCopies/MCF2L/MCF2L_partitions/MCF2L_group9.fasta	../firstrun/newGeneCopies/MCF2L/MCF2L_partitions/MCF2L_group9_MCF2L.fasta	MCF2L,
../firstrun/newGeneCopies/MCF2L/MCF2L_partitions/MCF2L_group7.fasta	../firstrun/newGeneCopies/MCF2L/MCF2L_partitions/MCF2L_group7_MCF2LOOOMCF2L-AS1OOORP11-120K24v3.fasta	RP11-120K24.5,RP11-120K24.3,RP11-120K24.4,MCF2L-AS1,MCF2L,
../firstrun/newGeneCopies/KCNJ12/KCNJ12_partitions/KCNJ12_group1.fasta	../firstrun/newGeneCopies/KCNJ12/KCNJ12_partitions/KCNJ12_group1_KCNJ12OOOKCNJ18.fasta	KCNJ18,KCNJ12,
../firstrun/newGeneCopies/TRMT9B/TRMT9B_partitions/TRMT9B_group1.fasta	../firstrun/newGeneCopies/TRMT9B/TRMT9B_partitions/TRMT9B_group1_TRMT9BOOOENSG00000284872OOORP11-369K16v1.fasta	RP11-369K16.1,ENSG00000284872,TRMT9B,
../firstrun/newGeneCopies/GSTM2/GSTM2_partitions/GSTM2_group4.fasta	../firstrun/newGeneCopies/GSTM2/GSTM2_partitions/GSTM2_group4_GSTM2OOOAC000032v2OOOGSTM1.fasta	GSTM4,GSTM1,GSTM2,AC000032.2,GSTM5,
../firstrun/newGeneCopies/CCR5/CCR5_partitions/CCR5_group1.fasta	../firstrun/newGeneCopies/CCR5/CCR5_partitions/CCR5_group1_CCR5OOOCCR5ASOOOCCRL2.fasta	CCRL2,CCR5,CCR5AS,
../firstrun/newGeneCopies/CDRT/CDRT_partitions/CDRT_group43.fasta	../firstrun/newGeneCopies/CDRT/CDRT_partitions/CDRT_group43_CDRT1OOOTVP23C-CDRT4OOOAC005838v2.fasta	FBXW10,AC005838.2,SNORA74,TRIM16L,TVP23B,COX10,RP11-385D13.1,CDRT1,TVP23C,TVP23C-CDRT4,
../firstrun/newGeneCopies/IGHV3OR16/IGHV3OR16_partitions/IGHV3OR16_group1.fasta	../firstrun/newGeneCopies/IGHV3OR16/IGHV3OR16_partitions/IGHV3OR16_group1_IGHV3OR16-10OOOIGHV3OR16-11OOOIGHV3OR16-17.fasta	RP11-1166P10.6,IGHV3-13,IGHV1OR16-4,IGHV3OR16-17,RP11-989E6.8,IGHV1OR16-3,IGHV3OR16-11,RP11-812E19.13,IGHV3OR16-9,ENSG00000277761,IGHV1-12,RP11-19N8.2,RP11-1166P10.8,IGHVIII-11-1,RP11-812E19.7,ENSG00000277836,IGHV3-11,IGHV3OR16-10,IGHV3OR16-8,RP11-812E19.12,
../firstrun/newGeneCopies/NSF/NSF_partitions/NSF_group4.fasta	../firstrun/newGeneCopies/NSF/NSF_partitions/NSF_group4_NSFOOONSFP1OOORPS7P11.fasta	NSFP1,NSF,RPS7P11,
../firstrun/newGeneCopies/PEX3/PEX3_partitions/PEX3_group1.fasta	../firstrun/newGeneCopies/PEX3/PEX3_partitions/PEX3_group1_PEX3OOOADAT2OOORNA5SP221.fasta	RP1-20N2.8,VDAC1P8,PEX3,ADAT2,RNA5SP221,
../firstrun/newGeneCopies/HLA-G/HLA-G_partitions/HLA-G_group1.fasta	../firstrun/newGeneCopies/HLA-G/HLA-G_partitions/HLA-G_group1_HLA-GOOOHCG4P3OOOHCG4P8.fasta	HLA-J,HCG4P8,HLA-A,ZNRD1ASP,HLA-G,HCG4P3,
../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group16.fasta	../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group16_LRBA.fasta	LRBA,
../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group21.fasta	../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group21_LRBA.fasta	LRBA,
../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group17.fasta	../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group17_LRBAOOORP11-174F8v1.fasta	LRBA,RP11-174F8.1,
../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group18.fasta	../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group18_LRBA.fasta	LRBA,
../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group19.fasta	../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group19_LRBAOOOMAB21L2OOORP11-1336O20v2.fasta	LRBA,RP11-1336O20.2,MAB21L2,
../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group15.fasta	../firstrun/newGeneCopies/LRBA/LRBA_partitions/LRBA_group15_LRBA.fasta	LRBA,
../firstrun/newGeneCopies/NDUFA6/NDUFA6_partitions/NDUFA6_group1.fasta	../firstrun/newGeneCopies/NDUFA6/NDUFA6_partitions/NDUFA6_group1_NDUFA6OOONDUFA6-DTOOOCYP2D6.fasta	SMDT1,ENSG00000282874,ENSG00000281757,RP4-669P10.20,ENSG00000283373,NDUFA6-DT,ENSG00000280705,ENSG00000284131,CYP2D6,NDUFA6,ENSG00000284297,ENSG00000282837,RP4-669P10.19,ENSG00000281266,ENSG00000282979,RP1-257I20.14,ENSG00000282969,ENSG00000281908,OLA1P1,ENSG00000283089,ENSG00000272000,CYP2D7,CYP2D8P,RP4-669P10.16,ENSG00000281053,
../firstrun/newGeneCopies/CYP4F12/CYP4F12_partitions/CYP4F12_group1.fasta	../firstrun/newGeneCopies/CYP4F12/CYP4F12_partitions/CYP4F12_group1_CYP4F12OOOCYP4F24POOOLLNLR-249E10v1.fasta	CYP4F12,CYP4F24P,LLNLR-249E10.1,
../firstrun/newGeneCopies/ARF1/ARF1_partitions/ARF1_group1.fasta	../firstrun/newGeneCopies/ARF1/ARF1_partitions/ARF1_group1_ARF1OOOC1orf35OOOMIR3620.fasta	ARF1,MIR3620,C1orf35,
../firstrun/newGeneCopies/AMN1/AMN1_partitions/AMN1_group3.fasta	../firstrun/newGeneCopies/AMN1/AMN1_partitions/AMN1_group3_AMN1OOOETFBKMTOOORP11-467L13v7.fasta	STMN1P1,ETFBKMT,AMN1,RP11-467L13.7,
../firstrun/newGeneCopies/ZNF92/ZNF92_partitions/ZNF92_group1.fasta	../firstrun/newGeneCopies/ZNF92/ZNF92_partitions/ZNF92_group1_ZNF92.fasta	ZNF92,
../firstrun/newGeneCopies/POLDIP3/POLDIP3_partitions/POLDIP3_group1.fasta	../firstrun/newGeneCopies/POLDIP3/POLDIP3_partitions/POLDIP3_group1_POLDIP3OOOCYB5R3OOORNU12.fasta	POLDIP3,RRP7BP,RNU12,CYB5R3,RRP7A,
../firstrun/newGeneCopies/ASTL/ASTL_partitions/ASTL_group1.fasta	../firstrun/newGeneCopies/ASTL/ASTL_partitions/ASTL_group1_ASTL.fasta	ASTL,
../firstrun/newGeneCopies/TULP1/TULP1_partitions/TULP1_group1.fasta	../firstrun/newGeneCopies/TULP1/TULP1_partitions/TULP1_group1_TULP1OOOTEAD3.fasta	TULP1,TEAD3,
../firstrun/newGeneCopies/U2AF1/U2AF1_partitions/U2AF1_group3.fasta	../firstrun/newGeneCopies/U2AF1/U2AF1_partitions/U2AF1_group3_U2AF1OOOU2AF1L5OOOCRYAA2.fasta	CRYAA2,U2AF1L5,U2AF1,KB-2007G4.1,
../firstrun/newGeneCopies/LRRC75B/LRRC75B_partitions/LRRC75B_group1.fasta	../firstrun/newGeneCopies/LRRC75B/LRRC75B_partitions/LRRC75B_group1_LRRC75BOOOGGT1OOOKB-1995A5v6.fasta	LRRC75B,GGT1,SNRPD3,KB-1995A5.6,
../firstrun/newGeneCopies/COL16/COL16_partitions/COL16_group1.fasta	../firstrun/newGeneCopies/COL16/COL16_partitions/COL16_group1_COL16A1OOOPEF1-AS1OOORP11-73M7v9.fasta	RP11-73M7.9,PEF1-AS1,COL16A1,
../firstrun/newGeneCopies/NOC3L/NOC3L_partitions/NOC3L_group1.fasta	../firstrun/newGeneCopies/NOC3L/NOC3L_partitions/NOC3L_group1_NOC3LOOOPLCE1.fasta	NOC3L,PLCE1,
../firstrun/newGeneCopies/SSX1/SSX1_partitions/SSX1_group1.fasta	../firstrun/newGeneCopies/SSX1/SSX1_partitions/SSX1_group1_SSX1OOORP11-552J9v6OOORP13-77O11v8.fasta	SSX6P,SSX7,RP13-77O11.8,SSX9P,SSXP4,SSXP5,SSX2B,SSX8P,RP11-552J9.6,SSX1,SSXP1,
../firstrun/newGeneCopies/TSEN54/TSEN54_partitions/TSEN54_group1.fasta	../firstrun/newGeneCopies/TSEN54/TSEN54_partitions/TSEN54_group1_TSEN54OOOCASKIN2OOOLLGL2.fasta	TSEN54,LLGL2,CASKIN2,
../firstrun/newGeneCopies/GPR148/GPR148_partitions/GPR148_group1.fasta	../firstrun/newGeneCopies/GPR148/GPR148_partitions/GPR148_group1_GPR148.fasta	GPR148,
../firstrun/newGeneCopies/RPS10/RPS10_partitions/RPS10_group26.fasta	../firstrun/newGeneCopies/RPS10/RPS10_partitions/RPS10_group26_RPS10OOORPS10-NUDT3OOONUDT3.fasta	RPS10-NUDT3,RPS10,NUDT3,
../firstrun/newGeneCopies/H2AB/H2AB_partitions/H2AB_group1.fasta	../firstrun/newGeneCopies/H2AB/H2AB_partitions/H2AB_group1_H2AB1OOOH2AB2OOOH2AB3.fasta	MIR1184-3,MIR1184-1,H2AB1,F8A3,H2AB3,TMLHE-AS1,MIR1184-2,F8,F8A2,F8A1,H2AB2,
../firstrun/newGeneCopies/DOK3/DOK3_partitions/DOK3_group1.fasta	../firstrun/newGeneCopies/DOK3/DOK3_partitions/DOK3_group1_DOK3OOODDX41OOORP11-1334A24v6.fasta	RP11-1334A24.6,DDX41,DOK3,
../firstrun/newGeneCopies/DHRS11/DHRS11_partitions/DHRS11_group1.fasta	../firstrun/newGeneCopies/DHRS11/DHRS11_partitions/DHRS11_group1_DHRS11OOOGGNBP2OOOMRM1.fasta	GGNBP2,MRM1,DHRS11,
../firstrun/newGeneCopies/ALOXE3/ALOXE3_partitions/ALOXE3_group2.fasta	../firstrun/newGeneCopies/ALOXE3/ALOXE3_partitions/ALOXE3_group2_ALOXE3OOOHES7.fasta	HES7,ALOXE3,
../firstrun/newGeneCopies/TCP10L2/TCP10L2_partitions/TCP10L2_group1.fasta	../firstrun/newGeneCopies/TCP10L2/TCP10L2_partitions/TCP10L2_group1_TCP10L2OOOCFAP298-TCP10LOOOGPR31.fasta	LINC00846,GPR31,TCP10L3,CFAP298-TCP10L,TCP10L,TCP10L2,TTLL2,RP11-517H2.9,
../firstrun/newGeneCopies/FAM209/FAM209_partitions/FAM209_group1.fasta	../firstrun/newGeneCopies/FAM209/FAM209_partitions/FAM209_group1_FAM209AOOOFAM209BOOOGCNT7.fasta	RP5-1153D9.5,RTF2,GCNT7,FAM209B,FAM209A,
../firstrun/newGeneCopies/CD8B/CD8B_partitions/CD8B_group2.fasta	../firstrun/newGeneCopies/CD8B/CD8B_partitions/CD8B_group2_CD8BOOOCD8B2OOOAC108868v5.fasta	ANAPC1P1,AC108868.5,RP11-448J14.1,CD8B2,CD8B,
../firstrun/newGeneCopies/CD8B/CD8B_partitions/CD8B_group1.fasta	../firstrun/newGeneCopies/CD8B/CD8B_partitions/CD8B_group1_CD8B.fasta	CD8B,
../firstrun/newGeneCopies/KIAA1586/KIAA1586_partitions/KIAA1586_group1.fasta	../firstrun/newGeneCopies/KIAA1586/KIAA1586_partitions/KIAA1586_group1_KIAA1586OOOZNF451.fasta	ZNF451,KIAA1586,
../firstrun/newGeneCopies/NPR1/NPR1_partitions/NPR1_group1.fasta	../firstrun/newGeneCopies/NPR1/NPR1_partitions/NPR1_group1_NPR1OOOMIR8083OOORN7SL372P.fasta	RN7SL372P,NPR1,MIR8083,
../firstrun/newGeneCopies/PRR23D/PRR23D_partitions/PRR23D_group1.fasta	../firstrun/newGeneCopies/PRR23D/PRR23D_partitions/PRR23D_group1_PRR23D1OOOPRR23D2OOOPRR23D3P.fasta	PRR23D2,RP11-1118M6.4,AC084121.20,RP11-1118M6.5,PRR23D1,PRR23D3P,
../firstrun/newGeneCopies/H3Y/H3Y_partitions/H3Y_group1.fasta	../firstrun/newGeneCopies/H3Y/H3Y_partitions/H3Y_group1_H3Y2OOOLINC02218OOORP11-321E2v12.fasta	LINC02218,H3Y2,RP11-321E2.12,TAF11L2,
../firstrun/newGeneCopies/H3Y/H3Y_partitions/H3Y_group2.fasta	../firstrun/newGeneCopies/H3Y/H3Y_partitions/H3Y_group2_H3Y1OOORP11-432M8v14OOORP11-432M8v16.fasta	H3Y1,RP11-432M8.18,RP11-432M8.16,RP11-432M8.14,
../firstrun/newGeneCopies/SPPL2C/SPPL2C_partitions/SPPL2C_group1.fasta	../firstrun/newGeneCopies/SPPL2C/SPPL2C_partitions/SPPL2C_group1_SPPL2COOOMAPT-AS1.fasta	SPPL2C,MAPT-AS1,
../firstrun/newGeneCopies/ZNF681/ZNF681_partitions/ZNF681_group3.fasta	../firstrun/newGeneCopies/ZNF681/ZNF681_partitions/ZNF681_group3_ZNF681OOOZNF726P1.fasta	ZNF681,ZNF726P1,
../firstrun/newGeneCopies/MARVELD2/MARVELD2_partitions/MARVELD2_group1.fasta	../firstrun/newGeneCopies/MARVELD2/MARVELD2_partitions/MARVELD2_group1_MARVELD2OOORAD17.fasta	RAD17,MARVELD2,
../firstrun/newGeneCopies/MT1G/MT1G_partitions/MT1G_group1.fasta	../firstrun/newGeneCopies/MT1G/MT1G_partitions/MT1G_group1_MT1GOOOMT1HOOOMT1IP.fasta	MT1H,MT1IP,MT1G,
../firstrun/newGeneCopies/ZNF726/ZNF726_partitions/ZNF726_group31.fasta	../firstrun/newGeneCopies/ZNF726/ZNF726_partitions/ZNF726_group31_ZNF726OOOCTB-92J24v2OOOCTB-92J24v3.fasta	ZNF92P3,ZNF726,CTB-92J24.2,CTB-92J24.3,
../firstrun/newGeneCopies/LMNB2/LMNB2_partitions/LMNB2_group1.fasta	../firstrun/newGeneCopies/LMNB2/LMNB2_partitions/LMNB2_group1_LMNB2OOOLINC01775OOOMIR7108.fasta	LMNB2,LINC01775,TIMM13,MIR7108,TMPRSS9,
../firstrun/newGeneCopies/SPIN/SPIN_partitions/SPIN_group19.fasta	../firstrun/newGeneCopies/SPIN/SPIN_partitions/SPIN_group19_SPINT2OOOCTB-102L5v4OOOCTB-102L5v9.fasta	Y_RNA,CTB-102L5.9,SPINT2,CTB-102L5.4,PPP1R14A,
../firstrun/newGeneCopies/SPIN/SPIN_partitions/SPIN_group50.fasta	../firstrun/newGeneCopies/SPIN/SPIN_partitions/SPIN_group50_SPIN2AOOOSPIN2BOOORP3-323P24v3.fasta	SPIN2A,SPIN2B,RP3-323P24.3,
../firstrun/newGeneCopies/SPIN/SPIN_partitions/SPIN_group12.fasta	../firstrun/newGeneCopies/SPIN/SPIN_partitions/SPIN_group12_SPIN1OOOHNRNPA1P14OOORP11-317B17v4.fasta	RP11-317B17.4,SPIN1,RP11-317B17.5,HNRNPA1P14,
../firstrun/newGeneCopies/TUBB4B/TUBB4B_partitions/TUBB4B_group7.fasta	../firstrun/newGeneCopies/TUBB4B/TUBB4B_partitions/TUBB4B_group7_TUBB4BOOOFAM166AOOOSLC34A3.fasta	FAM166A,TUBB4B,SLC34A3,
../firstrun/newGeneCopies/FBLN2/FBLN2_partitions/FBLN2_group1.fasta	../firstrun/newGeneCopies/FBLN2/FBLN2_partitions/FBLN2_group1_FBLN2.fasta	FBLN2,
../firstrun/newGeneCopies/CENPH/CENPH_partitions/CENPH_group1.fasta	../firstrun/newGeneCopies/CENPH/CENPH_partitions/CENPH_group1_CENPHOOOCTC-351M12v1.fasta	CENPH,CTC-351M12.1,
../firstrun/newGeneCopies/SBK1/SBK1_partitions/SBK1_group2.fasta	../firstrun/newGeneCopies/SBK1/SBK1_partitions/SBK1_group2_SBK1OOORP11-57A19v2OOORP11-57A19v7.fasta	RP11-57A19.7,RP11-57A19.2,SBK1,
../firstrun/newGeneCopies/SBK1/SBK1_partitions/SBK1_group1.fasta	../firstrun/newGeneCopies/SBK1/SBK1_partitions/SBK1_group1_SBK1OOORP11-57A19v7.fasta	RP11-57A19.7,SBK1,
../firstrun/newGeneCopies/KDM3A/KDM3A_partitions/KDM3A_group1.fasta	../firstrun/newGeneCopies/KDM3A/KDM3A_partitions/KDM3A_group1_KDM3A.fasta	KDM3A,
../firstrun/newGeneCopies/ACSM2B/ACSM2B_partitions/ACSM2B_group1.fasta	../firstrun/newGeneCopies/ACSM2B/ACSM2B_partitions/ACSM2B_group1_ACSM2BOOOACSM2AOOOCTD-3076M17v1.fasta	ACSM2B,ACSM2A,CTD-3076M17.1,
../firstrun/newGeneCopies/TUBGCP3/TUBGCP3_partitions/TUBGCP3_group2.fasta	../firstrun/newGeneCopies/TUBGCP3/TUBGCP3_partitions/TUBGCP3_group2_TUBGCP3.fasta	TUBGCP3,
../firstrun/newGeneCopies/COX14/COX14_partitions/COX14_group1.fasta	../firstrun/newGeneCopies/COX14/COX14_partitions/COX14_group1_COX14OOOGPD1OOORP4-605O3v4.fasta	COX14,RP4-605O3.4,GPD1,
../firstrun/newGeneCopies/MRPS21/MRPS21_partitions/MRPS21_group2.fasta	../firstrun/newGeneCopies/MRPS21/MRPS21_partitions/MRPS21_group2_MRPS21.fasta	MRPS21,
../firstrun/newGeneCopies/KLHL40/KLHL40_partitions/KLHL40_group1.fasta	../firstrun/newGeneCopies/KLHL40/KLHL40_partitions/KLHL40_group1_KLHL40OOOHHATLOOORP4-613B23v6.fasta	RP4-613B23.6,HHATL,RP4-613B23.8,KLHL40,
../firstrun/newGeneCopies/MC1R/MC1R_partitions/MC1R_group1.fasta	../firstrun/newGeneCopies/MC1R/MC1R_partitions/MC1R_group1_MC1ROOORP11-566K11v2OOORP11-566K11v4.fasta	RP11-566K11.4,MC1R,RP11-566K11.2,TUBB3,RP11-566K11.7,TCF25,
../firstrun/newGeneCopies/QARS1/QARS1_partitions/QARS1_group1.fasta	../firstrun/newGeneCopies/QARS1/QARS1_partitions/QARS1_group1_QARS1OOOMIR6890OOOQRICH1.fasta	QRICH1,MIR6890,USP19,QARS1,
../firstrun/newGeneCopies/CXorf65/CXorf65_partitions/CXorf65_group1.fasta	../firstrun/newGeneCopies/CXorf65/CXorf65_partitions/CXorf65_group1_CXorf65OOOFOXO4OOOIL2RG.fasta	RP5-1091N2.12,IL2RG,CXorf65,FOXO4,
../firstrun/newGeneCopies/SPIB/SPIB_partitions/SPIB_group1.fasta	../firstrun/newGeneCopies/SPIB/SPIB_partitions/SPIB_group1_SPIBOOOCTD-2545M3v6OOOMYBPC2.fasta	MYBPC2,SPIB,POLD1,CTD-2545M3.6,
../firstrun/newGeneCopies/HLA-J/HLA-J_partitions/HLA-J_group1.fasta	../firstrun/newGeneCopies/HLA-J/HLA-J_partitions/HLA-J_group1_HLA-JOOOHCG4P3OOOHCG4P8.fasta	HLA-A,ZNRD1ASP,HCG4P3,HCG4P8,HLA-G,HLA-J,
../firstrun/newGeneCopies/RHBDF1/RHBDF1_partitions/RHBDF1_group2.fasta	../firstrun/newGeneCopies/RHBDF1/RHBDF1_partitions/RHBDF1_group2_RHBDF1OOOMPGOOOPOLR3K.fasta	SNRNP25,POLR3K,RHBDF1,Z69720.3,MPG,
../firstrun/newGeneCopies/PRB/PRB_partitions/PRB_group33.fasta	../firstrun/newGeneCopies/PRB/PRB_partitions/PRB_group33_PRB1OOOPRB2OOOPRB3.fasta	PRB3,HIGD1AP8,RP11-711K1.7,RP11-434C1.4,PRB2,PRB1,PRB4,
../firstrun/newGeneCopies/SARS1/SARS1_partitions/SARS1_group1.fasta	../firstrun/newGeneCopies/SARS1/SARS1_partitions/SARS1_group1_SARS1.fasta	SARS1,
../firstrun/newGeneCopies/PPIG/PPIG_partitions/PPIG_group1.fasta	../firstrun/newGeneCopies/PPIG/PPIG_partitions/PPIG_group1_PPIG.fasta	PPIG,
../firstrun/newGeneCopies/PUDP/PUDP_partitions/PUDP_group29.fasta	../firstrun/newGeneCopies/PUDP/PUDP_partitions/PUDP_group29_PUDPOOOMIR4767OOOSTS.fasta	PUDP,STS,MIR4767,
../firstrun/newGeneCopies/PUDP/PUDP_partitions/PUDP_group3.fasta	../firstrun/newGeneCopies/PUDP/PUDP_partitions/PUDP_group3_PUDPOOOPUDPP1OOOCEACAMP10.fasta	CTC-490G23.6,PUDP,PSG8,PUDPP1,PSG1,CEACAMP10,PSG9,
../firstrun/newGeneCopies/PUDP/PUDP_partitions/PUDP_group28.fasta	../firstrun/newGeneCopies/PUDP/PUDP_partitions/PUDP_group28_PUDPOOORP11-483M24v2.fasta	PUDP,RP11-483M24.2,
../firstrun/newGeneCopies/PUDP/PUDP_partitions/PUDP_group9.fasta	../firstrun/newGeneCopies/PUDP/PUDP_partitions/PUDP_group9_PUDPOOOAC097347v1.fasta	PUDP,AC097347.1,
../firstrun/newGeneCopies/H19/H19_partitions/H19_group1.fasta	../firstrun/newGeneCopies/H19/H19_partitions/H19_group1_H19OOOENSG00000288361OOOENSG00000288428.fasta	ENSG00000288428,H19,ENSG10010135597.1,ENSG10010140038.1,MIR675,ENSG10010140052.1,ENSG10010137561.1,ENSG00000288361,LINC01219,ENSG10010134105.1,
../firstrun/newGeneCopies/PTPRCAP/PTPRCAP_partitions/PTPRCAP_group1.fasta	../firstrun/newGeneCopies/PTPRCAP/PTPRCAP_partitions/PTPRCAP_group1_PTPRCAPOOOCORO1BOOORPS6KB2.fasta	RPS6KB2-AS1,PTPRCAP,RPS6KB2,CORO1B,
../firstrun/newGeneCopies/ZNF107/ZNF107_partitions/ZNF107_group1.fasta	../firstrun/newGeneCopies/ZNF107/ZNF107_partitions/ZNF107_group1_ZNF107OOOBNIP3P11OOOMIR6839.fasta	BNIP3P11,ZNF107,MIR6839,
../firstrun/newGeneCopies/NPY4/NPY4_partitions/NPY4_group1.fasta	../firstrun/newGeneCopies/NPY4/NPY4_partitions/NPY4_group1_NPY4ROOONPY4R2OOOCH17-360D5v2.fasta	ICI-14BB7.1,NPY4R,NPY4R2,ENSG00000288244,CH17-360D5.2,
../firstrun/newGeneCopies/TTLL9/TTLL9_partitions/TTLL9_group1.fasta	../firstrun/newGeneCopies/TTLL9/TTLL9_partitions/TTLL9_group1_TTLL9OOODUSP15OOOPDRG1.fasta	TTLL9,DUSP15,PDRG1,
../firstrun/newGeneCopies/MPPED1/MPPED1_partitions/MPPED1_group1.fasta	../firstrun/newGeneCopies/MPPED1/MPPED1_partitions/MPPED1_group1_MPPED1OOOLINC01639.fasta	LINC01639,MPPED1,
../firstrun/newGeneCopies/MPPED1/MPPED1_partitions/MPPED1_group2.fasta	../firstrun/newGeneCopies/MPPED1/MPPED1_partitions/MPPED1_group2_MPPED1OOOXX-FW80414D10Lv1.fasta	XX-FW80414D10L.1,MPPED1,
../firstrun/newGeneCopies/DEFB1/DEFB1_partitions/DEFB1_group1.fasta	../firstrun/newGeneCopies/DEFB1/DEFB1_partitions/DEFB1_group1_DEFB1OOOGS1-24F4v2.fasta	GS1-24F4.2,DEFB1,
../firstrun/newGeneCopies/BAIAP2/BAIAP2_partitions/BAIAP2_group10.fasta	../firstrun/newGeneCopies/BAIAP2/BAIAP2_partitions/BAIAP2_group10_BAIAP2L2OOOCTA-228A9v3OOOPLA2G6.fasta	SLC16A8,CTA-228A9.3,PLA2G6,BAIAP2L2,
../firstrun/newGeneCopies/BAIAP2/BAIAP2_partitions/BAIAP2_group9.fasta	../firstrun/newGeneCopies/BAIAP2/BAIAP2_partitions/BAIAP2_group9_BAIAP2OOOBAIAP2-DTOOOAATK.fasta	CTD-2561B21.10,BAIAP2,AATK,CTD-2561B21.11,BAIAP2-DT,
../firstrun/newGeneCopies/SUMF2/SUMF2_partitions/SUMF2_group1.fasta	../firstrun/newGeneCopies/SUMF2/SUMF2_partitions/SUMF2_group1_SUMF2OOOCCT6AOOOPHKG1.fasta	SUMF2,CCT6A,PHKG1,
../firstrun/newGeneCopies/L1CAM/L1CAM_partitions/L1CAM_group1.fasta	../firstrun/newGeneCopies/L1CAM/L1CAM_partitions/L1CAM_group1_L1CAMOOOLCA10OOOU52112v13.fasta	L1CAM,U52112.13,LCA10,
../firstrun/newGeneCopies/PNO1/PNO1_partitions/PNO1_group1.fasta	../firstrun/newGeneCopies/PNO1/PNO1_partitions/PNO1_group1_PNO1OOOPPP3R1OOORP11-474G23v1.fasta	PPP3R1,PNO1,WDR92,RP11-474G23.1,
../firstrun/newGeneCopies/C16orf/C16orf_partitions/C16orf_group16.fasta	../firstrun/newGeneCopies/C16orf/C16orf_partitions/C16orf_group16_C16orf86OOOACDOOOENKD1.fasta	ACD,PARD6A,GFOD2,C16orf86,ENKD1,
../firstrun/newGeneCopies/C16orf/C16orf_partitions/C16orf_group21.fasta	../firstrun/newGeneCopies/C16orf/C16orf_partitions/C16orf_group21_C16orf95OOOC16orf95-DTOOORP11-178L8v1.fasta	RP11-178L8.5,RP11-178L8.4,C16orf95-DT,RP11-178L8.1,RP11-178L8.6,C16orf95,
../firstrun/newGeneCopies/C16orf/C16orf_partitions/C16orf_group20.fasta	../firstrun/newGeneCopies/C16orf/C16orf_partitions/C16orf_group20_C16orf95.fasta	C16orf95,
../firstrun/newGeneCopies/C16orf/C16orf_partitions/C16orf_group10.fasta	../firstrun/newGeneCopies/C16orf/C16orf_partitions/C16orf_group10_C16orf87OOOMYLK3OOORP11-480G7v2.fasta	C16orf87,MYLK3,RP11-480G7.2,
../firstrun/newGeneCopies/SEC11A/SEC11A_partitions/SEC11A_group21.fasta	../firstrun/newGeneCopies/SEC11A/SEC11A_partitions/SEC11A_group21_SEC11AOOORP11-245C17v2OOORP11-565O12v1.fasta	RP11-245C17.2,RP11-565O12.1,SEC11A,
../firstrun/newGeneCopies/PTEN/PTEN_partitions/PTEN_group2.fasta	../firstrun/newGeneCopies/PTEN/PTEN_partitions/PTEN_group2_PTENOOOPTENP1OOOPTENP1-AS.fasta	PTEN,PTENP1,PTENP1-AS,TRBVA,RPL11P3,
../firstrun/newGeneCopies/PTEN/PTEN_partitions/PTEN_group4.fasta	../firstrun/newGeneCopies/PTEN/PTEN_partitions/PTEN_group4_PTENOOOKLLNOOORP11-380G5v2.fasta	RP11-380G5.2,KLLN,PTEN,
../firstrun/newGeneCopies/AL928654/AL928654_partitions/AL928654_group1.fasta	../firstrun/newGeneCopies/AL928654/AL928654_partitions/AL928654_group1_AL928654v7OOOCRIP1OOOTEDC1.fasta	TEDC1,AL928654.7,CRIP1,
../firstrun/newGeneCopies/IGHG4/IGHG4_partitions/IGHG4_group1.fasta	../firstrun/newGeneCopies/IGHG4/IGHG4_partitions/IGHG4_group1_IGHG4OOOCOPDA1OOOELK2AP.fasta	IGHG4,MIR8071-2,IGHG2,MIR8071-1,IGHG3,IGHG1,IGHGP,COPDA1,ELK2AP,
../firstrun/newGeneCopies/LLGL2/LLGL2_partitions/LLGL2_group1.fasta	../firstrun/newGeneCopies/LLGL2/LLGL2_partitions/LLGL2_group1_LLGL2OOOTSEN54.fasta	TSEN54,LLGL2,
../firstrun/newGeneCopies/PCCB/PCCB_partitions/PCCB_group1.fasta	../firstrun/newGeneCopies/PCCB/PCCB_partitions/PCCB_group1_PCCBOOOSTAG1.fasta	STAG1,PCCB,
../firstrun/newGeneCopies/ADD2/ADD2_partitions/ADD2_group2.fasta	../firstrun/newGeneCopies/ADD2/ADD2_partitions/ADD2_group2_ADD2.fasta	ADD2,
../firstrun/newGeneCopies/ADD2/ADD2_partitions/ADD2_group3.fasta	../firstrun/newGeneCopies/ADD2/ADD2_partitions/ADD2_group3_ADD2OOOAC007395v3OOORP11-436H22v2.fasta	ADD2,RP11-436H22.2,AC007395.3,
../firstrun/newGeneCopies/UGT2B10/UGT2B10_partitions/UGT2B10_group1.fasta	../firstrun/newGeneCopies/UGT2B10/UGT2B10_partitions/UGT2B10_group1_UGT2B10OOORP11-468N14v1OOORP11-468N14v3.fasta	RP11-468N14.3,RP11-790I12.6,RP11-813N20.2,UGT2B24P,UGT2B28,UGT2B11,RP11-618I10.3,RP11-468N14.1,UGT2B25P,UGT2B27P,UGT2B10,RP11-704M14.2,RP11-704M14.1,
../firstrun/newGeneCopies/TMEM248/TMEM248_partitions/TMEM248_group2.fasta	../firstrun/newGeneCopies/TMEM248/TMEM248_partitions/TMEM248_group2_TMEM248.fasta	TMEM248,
../firstrun/newGeneCopies/FANCD2/FANCD2_partitions/FANCD2_group2.fasta	../firstrun/newGeneCopies/FANCD2/FANCD2_partitions/FANCD2_group2_FANCD2OOOFANCD2OSOOOFANCD2P2.fasta	RP11-758G22.1,CIDECP1,EMC3-AS1,CYCSP10,RP11-758G22.2,FANCD2P2,FANCD2OS,RNU6-670P,CYCSP11,CYCSP12,FANCD2,EMC3,
../firstrun/newGeneCopies/SETD4/SETD4_partitions/SETD4_group2.fasta	../firstrun/newGeneCopies/SETD4/SETD4_partitions/SETD4_group2_SETD4OOOSETD4-AS1OOOAP000688v14.fasta	RIMKLBP1,RNU6-992P,CBR1,SETD4-AS1,AP000688.14,SETD4,
../firstrun/newGeneCopies/NOL/NOL_partitions/NOL_group23.fasta	../firstrun/newGeneCopies/NOL/NOL_partitions/NOL_group23_NOL4LOOONOL4L-DTOOORP11-410N8v1.fasta	NOL4L,RP5-1184F4.5,RP11-410N8.1,RP5-1184F4.8,RP5-1184F4.7,RP11-410N8.3,NOL4L-DT,
../firstrun/newGeneCopies/SPATA31/SPATA31_partitions/SPATA31_group1.fasta	../firstrun/newGeneCopies/SPATA31/SPATA31_partitions/SPATA31_group1_SPATA31A1OOOSPATA31A3OOOSPATA31A5.fasta	SPATA31A6,SPATA31A7,SPATA31B1P,RP11-144A16.5,SPATA31C2,SPATA31A1,RP11-395E19.2,ZNF484,RP11-15B24.5,RP11-526D8.13,RP11-347J14.4,RP11-526D8.7,SPATA31C1,RP11-101E5.6,SPATA31A5,SPATA31A3,
../firstrun/newGeneCopies/SPATA31/SPATA31_partitions/SPATA31_group10.fasta	../firstrun/newGeneCopies/SPATA31/SPATA31_partitions/SPATA31_group10_SPATA31E1.fasta	SPATA31E1,
../firstrun/newGeneCopies/SPATA31/SPATA31_partitions/SPATA31_group6.fasta	../firstrun/newGeneCopies/SPATA31/SPATA31_partitions/SPATA31_group6_SPATA31D1OOOSPATA31D3OOOSPATA31D4.fasta	RP11-383M4.2,SPATA31D4,SPATA31D1,RP11-15B24.5,SPATA31D3,SPATA31D5P,RP11-383M4.6,
../firstrun/newGeneCopies/TMC8/TMC8_partitions/TMC8_group1.fasta	../firstrun/newGeneCopies/TMC8/TMC8_partitions/TMC8_group1_TMC8OOOTMC6.fasta	TMC6,TMC8,
../firstrun/newGeneCopies/SLC22A/SLC22A_partitions/SLC22A_group88.fasta	../firstrun/newGeneCopies/SLC22A/SLC22A_partitions/SLC22A_group88_SLC22A1OOOSLC22A2OOORP1-276N6v2.fasta	SLC22A2,SLC22A1,RP1-276N6.2,RP11-317M22.1,
../firstrun/newGeneCopies/SLC22A/SLC22A_partitions/SLC22A_group145.fasta	../firstrun/newGeneCopies/SLC22A/SLC22A_partitions/SLC22A_group145_SLC22A12.fasta	SLC22A12,
../firstrun/newGeneCopies/ACBD4/ACBD4_partitions/ACBD4_group1.fasta	../firstrun/newGeneCopies/ACBD4/ACBD4_partitions/ACBD4_group1_ACBD4OOOAC142472v6OOOPLCD3.fasta	AC142472.6,ACBD4,PLCD3,
../firstrun/newGeneCopies/GET4/GET4_partitions/GET4_group1.fasta	../firstrun/newGeneCopies/GET4/GET4_partitions/GET4_group1_GET4OOOADAP1OOOCOX19.fasta	ADAP1,RP11-449P15.2,GET4,SUN1,COX19,
../firstrun/newGeneCopies/FBN3/FBN3_partitions/FBN3_group1.fasta	../firstrun/newGeneCopies/FBN3/FBN3_partitions/FBN3_group1_FBN3OOOCCL25.fasta	CCL25,FBN3,
../firstrun/newGeneCopies/CD2BP2/CD2BP2_partitions/CD2BP2_group2.fasta	../firstrun/newGeneCopies/CD2BP2/CD2BP2_partitions/CD2BP2_group2_CD2BP2OOOCD2BP2-DTOOORP11-347C12v11.fasta	CD2BP2,CD2BP2-DT,RP11-347C12.11,TBC1D10B,
../firstrun/newGeneCopies/LILRA/LILRA_partitions/LILRA_group15.fasta	../firstrun/newGeneCopies/LILRA/LILRA_partitions/LILRA_group15_LILRA1OOOLILRA2OOOLILRA3.fasta	XXbac-BCX105G6.12,LILRB5,AC008984.5,LILRA3,LILRP1,LILRA1,LILRA4,LILRB1,AC011515.2,LLNLF-191E4.2,AC008984.7,LILRB1-AS1,AC010492.2,RNU6-1307P,AC010492.4,U6,LILRP2,RPS9,AC010518.3,LAIR1,AC008984.6,AC010518.2,LILRB3,CTB-83J4.1,LILRA5,CTB-83J4.2,MIR4752,VN1R104P,LILRB4,AC008984.2,LILRA6,XXbac-BPG111L9.8,LILRB2,AC098784.1,LILRA2,
../firstrun/newGeneCopies/RP11-886H22.1/RP11-886H22.1_partitions/RP11-886H22.1_group7.fasta	../firstrun/newGeneCopies/RP11-886H22.1/RP11-886H22.1_partitions/RP11-886H22.1_group7_RP11-886H22v1OOOACAA2OOOENSG10010137176v1.fasta	SNHG22,ACAA2,MYO5B,RP11-886H22.1,SCARNA17,ENSG10010137176.1,
../firstrun/newGeneCopies/USP12/USP12_partitions/USP12_group3.fasta	../firstrun/newGeneCopies/USP12/USP12_partitions/USP12_group3_USP12OOOUSP12-AS1OOOUSP12-AS2.fasta	RP11-144H23.2,USP12P1,RANBP17,USP12-AS1,LINC02340,USP12PY,USP12-AS2,USP12,USP12PX,
../firstrun/newGeneCopies/CASTOR2/CASTOR2_partitions/CASTOR2_group1.fasta	../firstrun/newGeneCopies/CASTOR2/CASTOR2_partitions/CASTOR2_group1_CASTOR2OOOAC004878v2OOOAC004878v8.fasta	AC004878.8,GTF2IP1,RCC1L,CASTOR3,CH17-232I21.1,AC004878.2,CASTOR2,GTF2IP4,
../firstrun/newGeneCopies/PSG/PSG_partitions/PSG_group4.fasta	../firstrun/newGeneCopies/PSG/PSG_partitions/PSG_group4_PSG1OOOPSG10POOOPSG11.fasta	PUDP,PSG1,CEACAMP9,PSG10P,CEACAMP11,AC005392.13,PSG6,PSG2,CTC-490G23.6,CEACAMP10,PSG9,CEACAMP8,CEACAMP7,PSG3,PSG4,PSG8,PSG8-AS1,PSG11,PSG5,CEACAMP6,PSG7,
../firstrun/newGeneCopies/KCNE1/KCNE1_partitions/KCNE1_group1.fasta	../firstrun/newGeneCopies/KCNE1/KCNE1_partitions/KCNE1_group1_KCNE1OOOKCNE1BOOOENSG10010135890v1.fasta	ENSG10010135890.1,ENSG10010137876.1,KCNE1,KCNE1B,
../firstrun/newGeneCopies/KCNE1/KCNE1_partitions/KCNE1_group2.fasta	../firstrun/newGeneCopies/KCNE1/KCNE1_partitions/KCNE1_group2_KCNE1OOOAP000326v5OOORCAN1.fasta	KCNE1,AP000326.5,RCAN1,
../firstrun/newGeneCopies/MAN1B1/MAN1B1_partitions/MAN1B1_group1.fasta	../firstrun/newGeneCopies/MAN1B1/MAN1B1_partitions/MAN1B1_group1_MAN1B1OOOMAN1B1-DTOOODPP7.fasta	SNORD62,MAN1B1-DT,UAP1L1,MAN1B1,DPP7,
../firstrun/newGeneCopies/RPL22/RPL22_partitions/RPL22_group1.fasta	../firstrun/newGeneCopies/RPL22/RPL22_partitions/RPL22_group1_RPL22OOORNF207OOORNF207-AS1.fasta	RPL22,RP1-120G22.12,RNF207-AS1,RNF207,
../firstrun/newGeneCopies/VAMP1/VAMP1_partitions/VAMP1_group1.fasta	../firstrun/newGeneCopies/VAMP1/VAMP1_partitions/VAMP1_group1_VAMP1OOORP1-102E24v10OOOTAPBPL.fasta	RP1-102E24.10,VAMP1,TAPBPL,
../firstrun/newGeneCopies/ISLR/ISLR_partitions/ISLR_group4.fasta	../firstrun/newGeneCopies/ISLR/ISLR_partitions/ISLR_group4_ISLROOORP11-665J16v1OOOSTRA6.fasta	STRA6,ISLR,RP11-665J16.1,
../firstrun/newGeneCopies/ISLR/ISLR_partitions/ISLR_group1.fasta	../firstrun/newGeneCopies/ISLR/ISLR_partitions/ISLR_group1_ISLR2OOOANP32BP1OOOCOMMD4.fasta	COMMD4P2,RP11-24M17.4,RP11-114H24.3,ISLR2,RP11-1006G14.3,ANP32BP1,PPIAP47,LINC02259,RP11-160C18.4,RP11-247C2.2,COMMD4P1,RP11-160C18.5,COMMD4,RP11-24M17.6,
../firstrun/newGeneCopies/HERPUD2/HERPUD2_partitions/HERPUD2_group1.fasta	../firstrun/newGeneCopies/HERPUD2/HERPUD2_partitions/HERPUD2_group1_HERPUD2OOOHERPUD2-AS1.fasta	HERPUD2,HERPUD2-AS1,
../firstrun/newGeneCopies/ANAPC2/ANAPC2_partitions/ANAPC2_group1.fasta	../firstrun/newGeneCopies/ANAPC2/ANAPC2_partitions/ANAPC2_group1_ANAPC2OOORP11-350O14v18OOOSSNA1.fasta	TMEM210,SSNA1,RP11-350O14.18,ANAPC2,
../firstrun/newGeneCopies/TBX1/TBX1_partitions/TBX1_group1.fasta	../firstrun/newGeneCopies/TBX1/TBX1_partitions/TBX1_group1_TBX1OOOGNB1L.fasta	TBX1,GNB1L,
../firstrun/newGeneCopies/VPS53/VPS53_partitions/VPS53_group1.fasta	../firstrun/newGeneCopies/VPS53/VPS53_partitions/VPS53_group1_VPS53OOORP11-411G7v2OOORP5-1029F21v2.fasta	RP5-1029F21.3,RP11-411G7.2,RP5-1029F21.2,RP5-1029F21.4,VPS53,
../firstrun/newGeneCopies/VPS53/VPS53_partitions/VPS53_group3.fasta	../firstrun/newGeneCopies/VPS53/VPS53_partitions/VPS53_group3_VPS53OOORPS4XP17.fasta	RPS4XP17,VPS53,
../firstrun/newGeneCopies/DNM1L/DNM1L_partitions/DNM1L_group2.fasta	../firstrun/newGeneCopies/DNM1L/DNM1L_partitions/DNM1L_group2_DNM1LOOORP11-278C7v1OOORP11-278C7v2.fasta	DNM1L,RP11-278C7.5,RP11-278C7.2,RP11-278C7.1,YARS2,RP11-278C7.3,RP11-278C7.4,Y_RNA,
../firstrun/newGeneCopies/RDH16/RDH16_partitions/RDH16_group1.fasta	../firstrun/newGeneCopies/RDH16/RDH16_partitions/RDH16_group1_RDH16.fasta	RDH16,
../firstrun/newGeneCopies/F10/F10_partitions/F10_group1.fasta	../firstrun/newGeneCopies/F10/F10_partitions/F10_group1_F10OOOF10-AS1OOOF7.fasta	F10,F7,F10-AS1,KARS1P2,RP11-98F14.12,
../firstrun/newGeneCopies/TNFRSF18/TNFRSF18_partitions/TNFRSF18_group1.fasta	../firstrun/newGeneCopies/TNFRSF18/TNFRSF18_partitions/TNFRSF18_group1_TNFRSF18OOOTNFRSF4OOOTTLL10.fasta	TTLL10,TNFRSF4,TNFRSF18,
../firstrun/newGeneCopies/MAGEA1/MAGEA1_partitions/MAGEA1_group1.fasta	../firstrun/newGeneCopies/MAGEA1/MAGEA1_partitions/MAGEA1_group1_MAGEA1.fasta	MAGEA1,
../firstrun/newGeneCopies/MYO7B/MYO7B_partitions/MYO7B_group1.fasta	../firstrun/newGeneCopies/MYO7B/MYO7B_partitions/MYO7B_group1_MYO7BOOOLIMS2OOORP11-286H15v1.fasta	RP11-286H15.1,MYO7B,LIMS2,
../firstrun/newGeneCopies/CRACDL/CRACDL_partitions/CRACDL_group3.fasta	../firstrun/newGeneCopies/CRACDL/CRACDL_partitions/CRACDL_group3_CRACDL.fasta	CRACDL,
../firstrun/newGeneCopies/CRACDL/CRACDL_partitions/CRACDL_group2.fasta	../firstrun/newGeneCopies/CRACDL/CRACDL_partitions/CRACDL_group2_CRACDL.fasta	CRACDL,
../firstrun/newGeneCopies/CRACDL/CRACDL_partitions/CRACDL_group1.fasta	../firstrun/newGeneCopies/CRACDL/CRACDL_partitions/CRACDL_group1_CRACDL.fasta	CRACDL,
../firstrun/newGeneCopies/CRACDL/CRACDL_partitions/CRACDL_group5.fasta	../firstrun/newGeneCopies/CRACDL/CRACDL_partitions/CRACDL_group5_CRACDL.fasta	CRACDL,
../firstrun/newGeneCopies/CRACDL/CRACDL_partitions/CRACDL_group4.fasta	../firstrun/newGeneCopies/CRACDL/CRACDL_partitions/CRACDL_group4_CRACDL.fasta	CRACDL,
../firstrun/newGeneCopies/CLN6/CLN6_partitions/CLN6_group2.fasta	../firstrun/newGeneCopies/CLN6/CLN6_partitions/CLN6_group2_CLN6OOOCALML4OOOHMGN2P40.fasta	CALML4,RP11-315D16.2,CLN6,HMGN2P40,
../firstrun/newGeneCopies/GPSM2/GPSM2_partitions/GPSM2_group1.fasta	../firstrun/newGeneCopies/GPSM2/GPSM2_partitions/GPSM2_group1_GPSM2OOOAKNAD1OOOAL449266v1.fasta	GPSM2,AKNAD1,CLCC1,AL449266.1,
../firstrun/newGeneCopies/ITGAD/ITGAD_partitions/ITGAD_group1.fasta	../firstrun/newGeneCopies/ITGAD/ITGAD_partitions/ITGAD_group1_ITGADOOOCOX6A2OOOITGAX.fasta	ZNF843,COX6A2,ITGAX,ITGAD,RP11-120K18.3,RP11-120K18.2,RP11-452L6.8,
../firstrun/newGeneCopies/ZNF793/ZNF793_partitions/ZNF793_group2.fasta	../firstrun/newGeneCopies/ZNF793/ZNF793_partitions/ZNF793_group2_ZNF793OOOZNF793-AS1OOOCTD-3064H18v2.fasta	ZNF571-AS1,ZNF540,CTD-3064H18.2,CTD-3064H18.4,ZNF793-AS1,ZNF793,
../firstrun/newGeneCopies/SUCLG1/SUCLG1_partitions/SUCLG1_group1.fasta	../firstrun/newGeneCopies/SUCLG1/SUCLG1_partitions/SUCLG1_group1_SUCLG1.fasta	SUCLG1,
../firstrun/newGeneCopies/SPDYE9/SPDYE9_partitions/SPDYE9_group1.fasta	../firstrun/newGeneCopies/SPDYE9/SPDYE9_partitions/SPDYE9_group1_SPDYE9OOOAC004951v6OOOAC004980v9.fasta	RP11-577H5.5,DTX2P1-UPK3BP1-PMS2P11,SPDYE10P,PMS2P8,CH17-264B6.3,SPDYE18,SPDYE2,PRR11,RP5-1022I14.2,RP11-514P8.7,PMS2P2,SPDYE22P,RNF216P1,SPDYE20P,SPDYE12P,AC004980.9,CH17-264B6.6,PMS2CL,SPDYE17,SPDYE2B,SPDYE13,RP11-467H10.2,PMS2P10,AC004951.6,SPDYE14,PMS2P1,CH17-264B6.1,SPDYE21,SPDYE9,SPDYE5,POLR2J2,RP5-1165K10.2,SPDYE16,SPDYE14P,PMS2P4,SPDYE3,POLR2J3,POLR2J4,SPDYE15P,SPDYE19P,SPDYE6,RP11-514P8.10,SPDYE8,SPDYE13P,SPDYE1,SPDYE15,RBAK-RBAKDN,SPDYE7P,PMS2P6,SPDYE11,PMS2P7,
../firstrun/newGeneCopies/CYB561D1/CYB561D1_partitions/CYB561D1_group1.fasta	../firstrun/newGeneCopies/CYB561D1/CYB561D1_partitions/CYB561D1_group1_CYB561D1OOOAMIGO1OOOATXN7L2.fasta	CYB561D1,AMIGO1,ATXN7L2,
../firstrun/newGeneCopies/SPI1/SPI1_partitions/SPI1_group1.fasta	../firstrun/newGeneCopies/SPI1/SPI1_partitions/SPI1_group1_SPI1OOOMYBPC3OOORP11-750H9v5.fasta	MYBPC3,RP11-750H9.5,SPI1,
../firstrun/newGeneCopies/RPEL1/RPEL1_partitions/RPEL1_group2.fasta	../firstrun/newGeneCopies/RPEL1/RPEL1_partitions/RPEL1_group2_RPEL1OOONT5C2.fasta	NT5C2,RPEL1,
../firstrun/newGeneCopies/EPN2/EPN2_partitions/EPN2_group1.fasta	../firstrun/newGeneCopies/EPN2/EPN2_partitions/EPN2_group1_EPN2OOOEPN2-AS1OOOAC007952v4.fasta	GRAPL,GRAPLDR,RP11-160E2.16,RP11-160E2.17,KYNUP3,AC124066.1,RP11-744A16.4,AC007952.6,RP11-160E2.21,KYNUP2,B9D1,EPN2,KYNUP1,RP11-160E2.19,EPN2-AS1,AC007952.4,AC007952.5,
../firstrun/newGeneCopies/TNFRSF6B/TNFRSF6B_partitions/TNFRSF6B_group1.fasta	../firstrun/newGeneCopies/TNFRSF6B/TNFRSF6B_partitions/TNFRSF6B_group1_RTEL1-TNFRSF6BOOOTNFRSF6BOOOARFRP1.fasta	TNFRSF6B,ARFRP1,RTEL1-TNFRSF6B,RTEL1,
../firstrun/newGeneCopies/METTL2B/METTL2B_partitions/METTL2B_group1.fasta	../firstrun/newGeneCopies/METTL2B/METTL2B_partitions/METTL2B_group1_METTL2BOOOEFCAB3OOOMETTL2A.fasta	EFCAB3,METTL2B,RP11-212P7.3,RP11-155G14.6,Metazoa_SRP,RP11-155G14.5,METTL2A,
../firstrun/newGeneCopies/DENND5/DENND5_partitions/DENND5_group4.fasta	../firstrun/newGeneCopies/DENND5/DENND5_partitions/DENND5_group4_DENND5BOOORNU6-618POOORP11-771K4v3.fasta	RP11-820K3.3,DENND5B,RNU6-618P,RP11-820K3.4,RP11-771K4.3,Y_RNA,
../firstrun/newGeneCopies/DENND5/DENND5_partitions/DENND5_group5.fasta	../firstrun/newGeneCopies/DENND5/DENND5_partitions/DENND5_group5_DENND5BOOOANKRD49P2.fasta	DENND5B,ANKRD49P2,
../firstrun/newGeneCopies/DENND5/DENND5_partitions/DENND5_group2.fasta	../firstrun/newGeneCopies/DENND5/DENND5_partitions/DENND5_group2_DENND5AOOOSCUBE2.fasta	DENND5A,SCUBE2,
../firstrun/newGeneCopies/DENND5/DENND5_partitions/DENND5_group3.fasta	../firstrun/newGeneCopies/DENND5/DENND5_partitions/DENND5_group3_DENND5AOOORP11-5L12v1.fasta	DENND5A,RP11-5L12.1,
../firstrun/newGeneCopies/DENND5/DENND5_partitions/DENND5_group1.fasta	../firstrun/newGeneCopies/DENND5/DENND5_partitions/DENND5_group1_DENND5BOOODENND5B-AS1OOOAK4.fasta	DENND5B,AK4,AK4P1,NF1,RPL31P50,DENND5B-AS1,AK4P3,RNU5F-4P,
../firstrun/newGeneCopies/UCN3/UCN3_partitions/UCN3_group1.fasta	../firstrun/newGeneCopies/UCN3/UCN3_partitions/UCN3_group1_UCN3.fasta	UCN3,
../firstrun/newGeneCopies/ARMC2/ARMC2_partitions/ARMC2_group1.fasta	../firstrun/newGeneCopies/ARMC2/ARMC2_partitions/ARMC2_group1_ARMC2OOOARMC2-AS1OOOATP5MFP2.fasta	RP11-249L21.2,ARMC2-AS1,ARMC2,ATP5MFP2,
../firstrun/newGeneCopies/CH17-140K24.8/CH17-140K24.8_partitions/CH17-140K24.8_group1.fasta	../firstrun/newGeneCopies/CH17-140K24.8/CH17-140K24.8_partitions/CH17-140K24.8_group1_CH17-140K24v8OOOAC005754v7OOOAC005754v8.fasta	PCDHB17P,CH17-140K24.3,PCDHB11,CH17-140K24.8,CH17-140K24.4,PCDHB5,CH17-140K24.6,PCDHB18P,CH17-140K24.5,CTC-270D5.1,CH17-140K24.2,PCDHB19P,PCDHB6,AC005754.8,PCDHB12,PCDHB16,PCDHB15,PCDHB3,CH17-140K24.1,PCDHB9,PCDHB13,PCDHB2,PCDHB7,AC005754.7,PCDHB4,PCDHB14,PCDHB8,CH17-140K24.7,PCDHB10,
../firstrun/newGeneCopies/HLA-H/HLA-H_partitions/HLA-H_group3.fasta	../firstrun/newGeneCopies/HLA-H/HLA-H_partitions/HLA-H_group3_HLA-HOOOHCG4P5OOOHCG4P7.fasta	MICF,HLA-A,HCG4P5,HLA-T,HLA-H,HCG4P7,HLA-U,
../firstrun/newGeneCopies/SYT12/SYT12_partitions/SYT12_group1.fasta	../firstrun/newGeneCopies/SYT12/SYT12_partitions/SYT12_group1_SYT12OOOMIR6860.fasta	MIR6860,SYT12,
../firstrun/newGeneCopies/MSL1/MSL1_partitions/MSL1_group1.fasta	../firstrun/newGeneCopies/MSL1/MSL1_partitions/MSL1_group1_MSL1.fasta	MSL1,
../firstrun/newGeneCopies/SLC8A2/SLC8A2_partitions/SLC8A2_group1.fasta	../firstrun/newGeneCopies/SLC8A2/SLC8A2_partitions/SLC8A2_group1_SLC8A2OOORP11-43N16v7.fasta	SLC8A2,RP11-43N16.7,
../firstrun/newGeneCopies/TPSB2/TPSB2_partitions/TPSB2_group1.fasta	../firstrun/newGeneCopies/TPSB2/TPSB2_partitions/TPSB2_group1_TPSB2OOOPRSS29POOORP11-616M22v5.fasta	TPSB2,RP11-616M22.5,TPSAB1,PRSS29P,TPSG1,TPSD1,
../firstrun/newGeneCopies/NAALAD2/NAALAD2_partitions/NAALAD2_group11.fasta	../firstrun/newGeneCopies/NAALAD2/NAALAD2_partitions/NAALAD2_group11_NAALAD2OOOAP000648v5.fasta	AP000648.5,NAALAD2,
../firstrun/newGeneCopies/VWA8/VWA8_partitions/VWA8_group5.fasta	../firstrun/newGeneCopies/VWA8/VWA8_partitions/VWA8_group5_VWA8.fasta	VWA8,
../firstrun/newGeneCopies/VWA8/VWA8_partitions/VWA8_group4.fasta	../firstrun/newGeneCopies/VWA8/VWA8_partitions/VWA8_group4_VWA8.fasta	VWA8,
../firstrun/newGeneCopies/VWA8/VWA8_partitions/VWA8_group6.fasta	../firstrun/newGeneCopies/VWA8/VWA8_partitions/VWA8_group6_VWA8OOOVWA8-AS1OOOKARS1P1.fasta	RNU6-74P,VWA8-AS1,VWA8,KARS1P1,
../firstrun/newGeneCopies/VWA8/VWA8_partitions/VWA8_group2.fasta	../firstrun/newGeneCopies/VWA8/VWA8_partitions/VWA8_group2_VWA8OOOMIR5006OOORP11-157L14v5.fasta	VWA8,RP11-157L14.5,MIR5006,
../firstrun/newGeneCopies/STX11/STX11_partitions/STX11_group1.fasta	../firstrun/newGeneCopies/STX11/STX11_partitions/STX11_group1_STX11.fasta	STX11,
../firstrun/newGeneCopies/SBNO/SBNO_partitions/SBNO_group2.fasta	../firstrun/newGeneCopies/SBNO/SBNO_partitions/SBNO_group2_SBNO2OOOGPX4OOOSTK11.fasta	STK11,SBNO2,GPX4,
../firstrun/newGeneCopies/SBNO/SBNO_partitions/SBNO_group1.fasta	../firstrun/newGeneCopies/SBNO/SBNO_partitions/SBNO_group1_SBNO1OOOSBNO1-AS1OOOMIR8072.fasta	Y_RNA,SBNO1-AS1,MIR8072,RNA5SP375,SBNO1,
../firstrun/newGeneCopies/NFATC3/NFATC3_partitions/NFATC3_group4.fasta	../firstrun/newGeneCopies/NFATC3/NFATC3_partitions/NFATC3_group4_NFATC3OOOESRP2OOORP11-96D1v10.fasta	NFATC3,RP11-96D1.5,RP11-96D1.10,RPS12P27,ESRP2,RP11-96D1.11,
../firstrun/newGeneCopies/NFATC3/NFATC3_partitions/NFATC3_group2.fasta	../firstrun/newGeneCopies/NFATC3/NFATC3_partitions/NFATC3_group2_NFATC3OOOENSG10010134216v1OOORP11-67A1v2.fasta	RP11-67A1.2,NFATC3,Y_RNA,RP11-96D1.9,RP11-67A1.4,ENSG10010134216.1,
../firstrun/newGeneCopies/AAR/AAR_partitions/AAR_group3.fasta	../firstrun/newGeneCopies/AAR/AAR_partitions/AAR_group3_AARD.fasta	AARD,
../firstrun/newGeneCopies/GSPT2/GSPT2_partitions/GSPT2_group1.fasta	../firstrun/newGeneCopies/GSPT2/GSPT2_partitions/GSPT2_group1_GSPT2.fasta	GSPT2,
../firstrun/newGeneCopies/SDR42E2/SDR42E2_partitions/SDR42E2_group1.fasta	../firstrun/newGeneCopies/SDR42E2/SDR42E2_partitions/SDR42E2_group1_SDR42E2OOORP11-101E7v5.fasta	SDR42E2,RP11-101E7.5,
../firstrun/newGeneCopies/NUDCD2/NUDCD2_partitions/NUDCD2_group1.fasta	../firstrun/newGeneCopies/NUDCD2/NUDCD2_partitions/NUDCD2_group1_NUDCD2OOOCCNG1OOOHMMR.fasta	HMMR,CCNG1,NUDCD2,
../firstrun/newGeneCopies/SCAMP2/SCAMP2_partitions/SCAMP2_group1.fasta	../firstrun/newGeneCopies/SCAMP2/SCAMP2_partitions/SCAMP2_group1_SCAMP2OOOULK3.fasta	SCAMP2,ULK3,
../firstrun/newGeneCopies/RIPOR1/RIPOR1_partitions/RIPOR1_group1.fasta	../firstrun/newGeneCopies/RIPOR1/RIPOR1_partitions/RIPOR1_group1_RIPOR1OOOCTD-2012K14v2OOOCTD-2012K14v3.fasta	RIPOR1,CTD-2012K14.4,CTD-2012K14.8,CTD-2012K14.6,CTD-2012K14.3,CTD-2012K14.2,
../firstrun/newGeneCopies/DEFB119/DEFB119_partitions/DEFB119_group1.fasta	../firstrun/newGeneCopies/DEFB119/DEFB119_partitions/DEFB119_group1_DEFB119OOOENSG10010135649v1.fasta	ENSG10010135649.1,DEFB119,
../firstrun/newGeneCopies/TCF20/TCF20_partitions/TCF20_group1.fasta	../firstrun/newGeneCopies/TCF20/TCF20_partitions/TCF20_group1_TCF20OOOOGFRP1OOORP4-669P10v21.fasta	TCF20,RP4-669P10.21,Z83851.1,Z83851.2,OGFRP1,
../firstrun/newGeneCopies/TCF20/TCF20_partitions/TCF20_group4.fasta	../firstrun/newGeneCopies/TCF20/TCF20_partitions/TCF20_group4_TCF20.fasta	TCF20,
../firstrun/newGeneCopies/CNOT3/CNOT3_partitions/CNOT3_group1.fasta	../firstrun/newGeneCopies/CNOT3/CNOT3_partitions/CNOT3_group1_CNOT3OOOLENG1.fasta	LENG1,CNOT3,
../firstrun/newGeneCopies/HLA-DP/HLA-DP_partitions/HLA-DP_group2.fasta	../firstrun/newGeneCopies/HLA-DP/HLA-DP_partitions/HLA-DP_group2_HLA-DPA1OOOHLA-DPA2OOOHLA-DPB1.fasta	RPL32P1,HLA-DPA2,HLA-DPA1,HLA-DPB1,
../firstrun/newGeneCopies/HLA-DP/HLA-DP_partitions/HLA-DP_group3.fasta	../firstrun/newGeneCopies/HLA-DP/HLA-DP_partitions/HLA-DP_group3_HLA-DPA3OOOHLA-DPB2OOOCOL11A2P1.fasta	HCG24,HLA-DPB2,HLA-DPA3,COL11A2P1,
../firstrun/newGeneCopies/H2AC19/H2AC19_partitions/H2AC19_group1.fasta	../firstrun/newGeneCopies/H2AC19/H2AC19_partitions/H2AC19_group1_H2AC19OOOH2AC18OOOH2BC19P.fasta	H3C15,H2BC20P,H4C15,H2AC18,H4C14,H2AC19,H2BC19P,H3C14,
../firstrun/newGeneCopies/NUTF2/NUTF2_partitions/NUTF2_group7.fasta	../firstrun/newGeneCopies/NUTF2/NUTF2_partitions/NUTF2_group7_NUTF2OOOCENPTOOOCTC-479C5v11.fasta	EDC4,CTC-479C5.11,THAP11,CENPT,NUTF2,
../firstrun/newGeneCopies/CFC1/CFC1_partitions/CFC1_group1.fasta	../firstrun/newGeneCopies/CFC1/CFC1_partitions/CFC1_group1_CFC1OOOCFC1BOOOAC013269v3.fasta	AC140481.4,CFC1,AC013269.3,PRSS40B,CFC1B,AC013269.4,
../firstrun/newGeneCopies/PHACTR2/PHACTR2_partitions/PHACTR2_group3.fasta	../firstrun/newGeneCopies/PHACTR2/PHACTR2_partitions/PHACTR2_group3_PHACTR2.fasta	PHACTR2,
../firstrun/newGeneCopies/PHACTR2/PHACTR2_partitions/PHACTR2_group1.fasta	../firstrun/newGeneCopies/PHACTR2/PHACTR2_partitions/PHACTR2_group1_PHACTR2OOOPHACTR2-AS1.fasta	PHACTR2-AS1,PHACTR2,
../firstrun/newGeneCopies/PHACTR2/PHACTR2_partitions/PHACTR2_group6.fasta	../firstrun/newGeneCopies/PHACTR2/PHACTR2_partitions/PHACTR2_group6_PHACTR2OOORP3-468K18v5.fasta	RP3-468K18.5,PHACTR2,
../firstrun/newGeneCopies/PHACTR2/PHACTR2_partitions/PHACTR2_group4.fasta	../firstrun/newGeneCopies/PHACTR2/PHACTR2_partitions/PHACTR2_group4_PHACTR2.fasta	PHACTR2,
../firstrun/newGeneCopies/GTPBP/GTPBP_partitions/GTPBP_group5.fasta	../firstrun/newGeneCopies/GTPBP/GTPBP_partitions/GTPBP_group5_GTPBP3OOOANO8.fasta	ANO8,GTPBP3,
../firstrun/newGeneCopies/GTPBP/GTPBP_partitions/GTPBP_group4.fasta	../firstrun/newGeneCopies/GTPBP/GTPBP_partitions/GTPBP_group4_GTPBP4OOOIDI2OOOIDI2-AS1.fasta	RP11-363N22.3,GTPBP4,IDI2,IDI2-AS1,
../firstrun/newGeneCopies/GTPBP/GTPBP_partitions/GTPBP_group7.fasta	../firstrun/newGeneCopies/GTPBP/GTPBP_partitions/GTPBP_group7_GTPBP6OOOLINC00685OOOPLCXD1.fasta	GTPBP6,LINC00685,PLCXD1,
../firstrun/newGeneCopies/LBR/LBR_partitions/LBR_group1.fasta	../firstrun/newGeneCopies/LBR/LBR_partitions/LBR_group1_LBROOODNAH14.fasta	LBR,DNAH14,
../firstrun/newGeneCopies/CUX2/CUX2_partitions/CUX2_group3.fasta	../firstrun/newGeneCopies/CUX2/CUX2_partitions/CUX2_group3_CUX2.fasta	CUX2,
../firstrun/newGeneCopies/CUX2/CUX2_partitions/CUX2_group2.fasta	../firstrun/newGeneCopies/CUX2/CUX2_partitions/CUX2_group2_CUX2.fasta	CUX2,
../firstrun/newGeneCopies/CUX2/CUX2_partitions/CUX2_group4.fasta	../firstrun/newGeneCopies/CUX2/CUX2_partitions/CUX2_group4_CUX2OOOMIR6760OOORNA5SP373.fasta	RNA5SP373,CUX2,MIR6760,
../firstrun/newGeneCopies/PSKH/PSKH_partitions/PSKH_group1.fasta	../firstrun/newGeneCopies/PSKH/PSKH_partitions/PSKH_group1_PSKH2OOOATP6V0D2.fasta	ATP6V0D2,PSKH2,
../firstrun/newGeneCopies/PSKH/PSKH_partitions/PSKH_group2.fasta	../firstrun/newGeneCopies/PSKH/PSKH_partitions/PSKH_group2_PSKH1OOOCTC-479C5v12OOOCTRL.fasta	PSKH1,CTC-479C5.12,CTRL,
../firstrun/newGeneCopies/PTP4A2/PTP4A2_partitions/PTP4A2_group1.fasta	../firstrun/newGeneCopies/PTP4A2/PTP4A2_partitions/PTP4A2_group1_PTP4A2OOORP11-84A19v4OOORP4-534N18v2.fasta	PTP4A2,RP11-84A19.4,RP4-534N18.5,RP4-534N18.2,
../firstrun/newGeneCopies/CFAP53/CFAP53_partitions/CFAP53_group1.fasta	../firstrun/newGeneCopies/CFAP53/CFAP53_partitions/CFAP53_group1_CFAP53OOOMBD1OOORP11-699C17v1.fasta	RP11-699C17.1,CFAP53,MBD1,
../firstrun/newGeneCopies/DUS2/DUS2_partitions/DUS2_group2.fasta	../firstrun/newGeneCopies/DUS2/DUS2_partitions/DUS2_group2_DUS2OOODDX28OOODPEP2NB.fasta	DDX28,RNU6-359P,KARS1P3,DPEP2NB,RP11-67A1.2,DUS2,
../firstrun/newGeneCopies/DUS2/DUS2_partitions/DUS2_group1.fasta	../firstrun/newGeneCopies/DUS2/DUS2_partitions/DUS2_group1_DUS2OOODPEP2.fasta	DUS2,DPEP2,
../firstrun/newGeneCopies/RP11-307N16.6/RP11-307N16.6_partitions/RP11-307N16.6_group6.fasta	../firstrun/newGeneCopies/RP11-307N16.6/RP11-307N16.6_partitions/RP11-307N16.6_group6_RP11-307N16v6OOOSPATA13OOOSPATA13-AS1.fasta	SPATA13,RP11-307N16.6,SPATA13-AS1,
../firstrun/newGeneCopies/RP11-307N16.6/RP11-307N16.6_partitions/RP11-307N16.6_group4.fasta	../firstrun/newGeneCopies/RP11-307N16.6/RP11-307N16.6_partitions/RP11-307N16.6_group4_RP11-307N16v6OOOMIR2276OOOSPATA13.fasta	SPATA13,RP11-307N16.6,MIR2276,
../firstrun/newGeneCopies/RP11-307N16.6/RP11-307N16.6_partitions/RP11-307N16.6_group2.fasta	../firstrun/newGeneCopies/RP11-307N16.6/RP11-307N16.6_partitions/RP11-307N16.6_group2_RP11-307N16v6OOOC1QTNF9OOOC1QTNF9-AS1.fasta	LINC00621,NUS1P3,C1QTNF9-AS1,SPATA13,RP11-307N16.7,C1QTNF9,C1QTNF9B,RP11-307N16.6,RP11-124N19.3,NUS1P2,PCOTH,
../firstrun/newGeneCopies/MRC1/MRC1_partitions/MRC1_group1.fasta	../firstrun/newGeneCopies/MRC1/MRC1_partitions/MRC1_group1_MRC1OOOMIR511OOORP11-457D2v3.fasta	RP11-457D2.3,MIR511,MRC1,
../firstrun/newGeneCopies/OR6B1/OR6B1_partitions/OR6B1_group1.fasta	../firstrun/newGeneCopies/OR6B1/OR6B1_partitions/OR6B1_group1_OR6B1OOOOR2F1.fasta	OR2F1,OR6B1,
../firstrun/newGeneCopies/RAET1L/RAET1L_partitions/RAET1L_group1.fasta	../firstrun/newGeneCopies/RAET1L/RAET1L_partitions/RAET1L_group1_RAET1LOOORAET1E-AS1OOORAET1G.fasta	RAET1L,RP11-244K5.7,RAET1G,ULBP2,RAET1E-AS1,
../firstrun/newGeneCopies/TBC1D31/TBC1D31_partitions/TBC1D31_group1.fasta	../firstrun/newGeneCopies/TBC1D31/TBC1D31_partitions/TBC1D31_group1_TBC1D31OOODERL1OOOHMGB1P19.fasta	DERL1,HMGB1P19,TBC1D31,
../firstrun/newGeneCopies/PSD/PSD_partitions/PSD_group104.fasta	../firstrun/newGeneCopies/PSD/PSD_partitions/PSD_group104_PSDOOOCUEDC2OOOFBXL15.fasta	NFKB2,FBXL15,CUEDC2,PSD,
../firstrun/newGeneCopies/FEM/FEM_partitions/FEM_group6.fasta	../firstrun/newGeneCopies/FEM/FEM_partitions/FEM_group6_FEM1BOOOITGA11OOORP11-315D16v4.fasta	FEM1B,ITGA11,RP11-315D16.4,
../firstrun/newGeneCopies/TMEM121/TMEM121_partitions/TMEM121_group1.fasta	../firstrun/newGeneCopies/TMEM121/TMEM121_partitions/TMEM121_group1_TMEM121.fasta	TMEM121,
../firstrun/newGeneCopies/TARBP2/TARBP2_partitions/TARBP2_group1.fasta	../firstrun/newGeneCopies/TARBP2/TARBP2_partitions/TARBP2_group1_TARBP2OOOATF7OOOATF7-NPFF.fasta	NPFF,ATF7-NPFF,RP11-793H13.11,MAP3K12,ATF7,TARBP2,
../firstrun/newGeneCopies/MAGEA3/MAGEA3_partitions/MAGEA3_group1.fasta	../firstrun/newGeneCopies/MAGEA3/MAGEA3_partitions/MAGEA3_group1_MAGEA3OOOCSAG1OOOCSAG2.fasta	MAGEA6,MAGEA12,CSAG2,CSAG3,MAGEA3,CSAG1,MAGEA2,RP1-14D6.13,MAGEA6-DT,RP1-14D6.7,MAGEA2B,CSAG4,
../firstrun/newGeneCopies/ALDH3B/ALDH3B_partitions/ALDH3B_group1.fasta	../firstrun/newGeneCopies/ALDH3B/ALDH3B_partitions/ALDH3B_group1_ALDH3B2OOORPL37P2.fasta	RPL37P2,ALDH3B2,
../firstrun/newGeneCopies/ALDH3B/ALDH3B_partitions/ALDH3B_group2.fasta	../firstrun/newGeneCopies/ALDH3B/ALDH3B_partitions/ALDH3B_group2_ALDH3B1OOONDUFS8OOORP5-901A4v1.fasta	RP5-901A4.1,ALDH3B1,NDUFS8,
../firstrun/newGeneCopies/NEB/NEB_partitions/NEB_group1.fasta	../firstrun/newGeneCopies/NEB/NEB_partitions/NEB_group1_NEBOOORIF1.fasta	RIF1,NEB,
../firstrun/newGeneCopies/CHMP3/CHMP3_partitions/CHMP3_group1.fasta	../firstrun/newGeneCopies/CHMP3/CHMP3_partitions/CHMP3_group1_CHMP3OOORNF103-CHMP3OOOAC015971v2.fasta	CHMP3,RNU6-640P,RNF103-CHMP3,AC015971.2,
../firstrun/newGeneCopies/LENG1/LENG1_partitions/LENG1_group1.fasta	../firstrun/newGeneCopies/LENG1/LENG1_partitions/LENG1_group1_LENG1OOOCNOT3OOOTMC4.fasta	CNOT3,LENG1,TMC4,
../firstrun/newGeneCopies/CCDC116/CCDC116_partitions/CCDC116_group1.fasta	../firstrun/newGeneCopies/CCDC116/CCDC116_partitions/CCDC116_group1_CCDC116OOOKB-1440D3v14OOOSDF2L1.fasta	CCDC116,KB-1440D3.14,YDJC,SDF2L1,
../firstrun/newGeneCopies/GABPB2/GABPB2_partitions/GABPB2_group1.fasta	../firstrun/newGeneCopies/GABPB2/GABPB2_partitions/GABPB2_group1_GABPB2OOOCDC42SE1OOOMLLT11.fasta	CDC42SE1,GABPB2,MLLT11,RPS29P29,
../firstrun/newGeneCopies/CREB3L3/CREB3L3_partitions/CREB3L3_group1.fasta	../firstrun/newGeneCopies/CREB3L3/CREB3L3_partitions/CREB3L3_group1_CREB3L3OOOSIRT6.fasta	SIRT6,CREB3L3,
../firstrun/newGeneCopies/H2BW2/H2BW2_partitions/H2BW2_group1.fasta	../firstrun/newGeneCopies/H2BW2/H2BW2_partitions/H2BW2_group1_H2BW2OOOH2BW3POOOTMSB15B.fasta	TMSB15B,H2BW3P,H2BW2,
../firstrun/newGeneCopies/INPP5A/INPP5A_partitions/INPP5A_group1.fasta	../firstrun/newGeneCopies/INPP5A/INPP5A_partitions/INPP5A_group1_INPP5A.fasta	INPP5A,
../firstrun/newGeneCopies/INPP5A/INPP5A_partitions/INPP5A_group4.fasta	../firstrun/newGeneCopies/INPP5A/INPP5A_partitions/INPP5A_group4_INPP5AOOONKX6-2.fasta	INPP5A,NKX6-2,
../firstrun/newGeneCopies/TMC6/TMC6_partitions/TMC6_group1.fasta	../firstrun/newGeneCopies/TMC6/TMC6_partitions/TMC6_group1_TMC6OOOTMC8OOOTNRC6C.fasta	TNRC6C-AS1,TMC8,TNRC6C,TMC6,
../firstrun/newGeneCopies/FAM89/FAM89_partitions/FAM89_group3.fasta	../firstrun/newGeneCopies/FAM89/FAM89_partitions/FAM89_group3_FAM89BOOOEHBP1L1OOOZNRD2.fasta	EHBP1L1,ZNRD2-AS1,ZNRD2,FAM89B,
../firstrun/newGeneCopies/TBCD/TBCD_partitions/TBCD_group2.fasta	../firstrun/newGeneCopies/TBCD/TBCD_partitions/TBCD_group2_TBCDOOOB3GNTL1OOOFN3K.fasta	FN3K,RP11-497H17.1,RP11-388C12.8,B3GNTL1,TBCD,ZNF750,RP11-567O16.1,
../firstrun/newGeneCopies/PPP6R3/PPP6R3_partitions/PPP6R3_group1.fasta	../firstrun/newGeneCopies/PPP6R3/PPP6R3_partitions/PPP6R3_group1_PPP6R3OOOCTD-2007L18v5OOONDUFA3P2.fasta	PPP6R3,CTD-2007L18.5,NDUFA3P2,
../firstrun/newGeneCopies/TIA1/TIA1_partitions/TIA1_group1.fasta	../firstrun/newGeneCopies/TIA1/TIA1_partitions/TIA1_group1_TIA1OOOC2orf42OOOMIR1285-2.fasta	C2orf42,PCYOX1,TIA1,MIR1285-2,RPL39P15,
../firstrun/newGeneCopies/ETFBKMT/ETFBKMT_partitions/ETFBKMT_group1.fasta	../firstrun/newGeneCopies/ETFBKMT/ETFBKMT_partitions/ETFBKMT_group1_ETFBKMTOOOAMN1OOORP11-820K3v7.fasta	ETFBKMT,AMN1,RP11-820K3.7,
../firstrun/newGeneCopies/PROS1/PROS1_partitions/PROS1_group1.fasta	../firstrun/newGeneCopies/PROS1/PROS1_partitions/PROS1_group1_PROS1OOOARL13BOOOHSPE1P19.fasta	PROS1,HSPE1P19,PROS2P,ARL13B,Y_RNA,RNU6-511P,
../firstrun/newGeneCopies/ARSF/ARSF_partitions/ARSF_group1.fasta	../firstrun/newGeneCopies/ARSF/ARSF_partitions/ARSF_group1_ARSFOOOARSFP1OOOGYG2P1.fasta	RPS24P21,RN7SL702P,ARSF,GYG2P1,ARSFP1,RN7SL578P,RPS24P1,
../firstrun/newGeneCopies/ARSF/ARSF_partitions/ARSF_group3.fasta	../firstrun/newGeneCopies/ARSF/ARSF_partitions/ARSF_group3_ARSFOOOGYG2P1.fasta	ARSF,GYG2P1,
../firstrun/newGeneCopies/LPAR2/LPAR2_partitions/LPAR2_group1.fasta	../firstrun/newGeneCopies/LPAR2/LPAR2_partitions/LPAR2_group1_LPAR2OOOGMIP.fasta	LPAR2,GMIP,
../firstrun/newGeneCopies/ELN/ELN_partitions/ELN_group1.fasta	../firstrun/newGeneCopies/ELN/ELN_partitions/ELN_group1_ELNOOOELN-AS1.fasta	ELN-AS1,ELN,
../firstrun/newGeneCopies/DBNDD1/DBNDD1_partitions/DBNDD1_group1.fasta	../firstrun/newGeneCopies/DBNDD1/DBNDD1_partitions/DBNDD1_group1_DBNDD1OOOAFG3L1POOOGAS8.fasta	DBNDD1,GAS8,AFG3L1P,
../firstrun/newGeneCopies/PLEKHO1/PLEKHO1_partitions/PLEKHO1_group1.fasta	../firstrun/newGeneCopies/PLEKHO1/PLEKHO1_partitions/PLEKHO1_group1_PLEKHO1.fasta	PLEKHO1,
../firstrun/newGeneCopies/FIBP/FIBP_partitions/FIBP_group1.fasta	../firstrun/newGeneCopies/FIBP/FIBP_partitions/FIBP_group1_FIBPOOOCCDC85BOOOCTSW.fasta	CTSW,CCDC85B,FOSL1,FIBP,
../firstrun/newGeneCopies/PRAMEF/PRAMEF_partitions/PRAMEF_group1.fasta	../firstrun/newGeneCopies/PRAMEF/PRAMEF_partitions/PRAMEF_group1_PRAMEF1OOOPRAMEF12OOOPRAMEF13.fasta	ENSG00000283624,PRAMEF33,PRAMEF7,CH17-223I5.1,RP13-177J6.3,PRAMEF27,PRAMEF19,PRAMEF28P,PRAMEF32P,PRAMEF8,PRAMEF13,NLN,RNU6-1072P,PRAMEF9,RP11-219C24.10,PRAMEF1,HNRNPCL3,RP13-177J6.1,PRAMEF14,PRAMEF31P,U6,ENSG00000282341,HNRNPCL2,RP13-177J6.2,CH17-223I5.10,PRAMEF6,PRAMEF20,PRAMEF35P,PRAMEF36P,PRAMEF26,PRAMEF5,RNU6-771P,PRAMEF25,RP13-221M14.2,PRAMEF17,PRAMEF15,RP13-177J6.4,CH17-223I5.7,PRAMEF29P,PRAMEF34P,HNRNPCL4,PRAMEF18,CTD-2353N24.1,PRAMEF22,PRAMEF12,
../firstrun/newGeneCopies/RP11-872D17.8/RP11-872D17.8_partitions/RP11-872D17.8_group1.fasta	../firstrun/newGeneCopies/RP11-872D17.8/RP11-872D17.8_partitions/RP11-872D17.8_group1_RP11-872D17v8OOOPRG2OOOSLC43A3.fasta	RP11-872D17.8,SLC43A3,PRG2,
../firstrun/newGeneCopies/GAB4/GAB4_partitions/GAB4_group1.fasta	../firstrun/newGeneCopies/GAB4/GAB4_partitions/GAB4_group1_GAB4.fasta	GAB4,
../firstrun/newGeneCopies/PGLYRP1/PGLYRP1_partitions/PGLYRP1_group1.fasta	../firstrun/newGeneCopies/PGLYRP1/PGLYRP1_partitions/PGLYRP1_group1_PGLYRP1OOOCCDC61OOOCTC-344H19v4.fasta	MIR769,CCDC61,PGLYRP1,CTC-344H19.4,
../firstrun/newGeneCopies/KLK7/KLK7_partitions/KLK7_group2.fasta	../firstrun/newGeneCopies/KLK7/KLK7_partitions/KLK7_group2_KLK7OOOCTB-147C22v9OOOKLK6.fasta	KLK7,KLK6,CTB-147C22.9,
../firstrun/newGeneCopies/FOSL1/FOSL1_partitions/FOSL1_group2.fasta	../firstrun/newGeneCopies/FOSL1/FOSL1_partitions/FOSL1_group2_FOSL1OOOCCDC85B.fasta	CCDC85B,FOSL1,
../firstrun/newGeneCopies/MORN3/MORN3_partitions/MORN3_group1.fasta	../firstrun/newGeneCopies/MORN3/MORN3_partitions/MORN3_group1_MORN3OOOORAI1.fasta	MORN3,ORAI1,
../firstrun/newGeneCopies/MTFR1/MTFR1_partitions/MTFR1_group4.fasta	../firstrun/newGeneCopies/MTFR1/MTFR1_partitions/MTFR1_group4_MTFR1OOOPDE7A.fasta	MTFR1,PDE7A,
../firstrun/newGeneCopies/MTFR1/MTFR1_partitions/MTFR1_group2.fasta	../firstrun/newGeneCopies/MTFR1/MTFR1_partitions/MTFR1_group2_MTFR1OOOPDE7AOOORP11-707M3v3.fasta	MTFR1,PDE7A,RP11-707M3.3,
../firstrun/newGeneCopies/USP2/USP2_partitions/USP2_group19.fasta	../firstrun/newGeneCopies/USP2/USP2_partitions/USP2_group19_USP2OOOUSP2-AS1OOODUXAP5.fasta	USP2-AS1,USP2,RP11-334E6.3,DUXAP5,RP11-334E6.4,THY1,THY1-AS1,RP11-334E6.2,
../firstrun/newGeneCopies/MT1X/MT1X_partitions/MT1X_group2.fasta	../firstrun/newGeneCopies/MT1X/MT1X_partitions/MT1X_group2_MT1XOOODPPA2P4OOOMT1IP.fasta	MT1IP,MT1X,DPPA2P4,RP11-343H19.2,
../firstrun/newGeneCopies/PRODH/PRODH_partitions/PRODH_group129.fasta	../firstrun/newGeneCopies/PRODH/PRODH_partitions/PRODH_group129_PRODHOOOAC007326v11OOOAC007326v13.fasta	ENSG00000278817,ENSG00000277196,DGCR6,XXbac-B444P24.10,PRODH,DGCR6L,AC007326.11,AC007326.13,
../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group77.fasta	../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group77_SLC2A14OOOSLC2A3OOOHSPD1P12.fasta	RP11-277E18.2,Y_RNA,RP11-69M1.8,HSPD1P12,RP11-815D16.1,Metazoa_SRP,NANOGP1,RP11-69M1.1,RP11-69M1.4,SLC2A14,RP11-277J24.7,RP11-277J24.1,SLC2A3,RP11-69M1.9,
../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group86.fasta	../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group86_SLC2A13OOOC12orf40.fasta	SLC2A13,C12orf40,
../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group87.fasta	../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group87_SLC2A13.fasta	SLC2A13,
../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group110.fasta	../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group110_SLC2A4RGOOOLIME1OOORP4-583P15v10.fasta	LIME1,SLC2A4RG,RP4-583P15.15,RP4-583P15.14,RP4-583P15.10,ZBTB46,
../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group84.fasta	../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group84_SLC2A13OOOC12orf40OOOENSG10010139722v1.fasta	SLC2A13,C12orf40,ENSG10010139722.1,
../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group89.fasta	../firstrun/newGeneCopies/SLC2A/SLC2A_partitions/SLC2A_group89_SLC2A13.fasta	SLC2A13,
../firstrun/newGeneCopies/CLTCL1/CLTCL1_partitions/CLTCL1_group2.fasta	../firstrun/newGeneCopies/CLTCL1/CLTCL1_partitions/CLTCL1_group2_CLTCL1OOOAC000085v4.fasta	CLTCL1,AC000085.4,
../firstrun/newGeneCopies/CLTCL1/CLTCL1_partitions/CLTCL1_group1.fasta	../firstrun/newGeneCopies/CLTCL1/CLTCL1_partitions/CLTCL1_group1_CLTCL1OOOAC000081v2OOOENSG10010136839v1.fasta	CLTCL1,AC000081.2,KRT18P62,SLC25A1,ENSG10010136839.1,XX-15A10.1,
../firstrun/newGeneCopies/POLD4/POLD4_partitions/POLD4_group1.fasta	../firstrun/newGeneCopies/POLD4/POLD4_partitions/POLD4_group1_POLD4OOOAP003419v11OOOCTC-1337H24v3.fasta	POLD4,CTC-1337H24.3,RAD9A,AP003419.11,
../firstrun/newGeneCopies/LRRC7/LRRC7_partitions/LRRC7_group1.fasta	../firstrun/newGeneCopies/LRRC7/LRRC7_partitions/LRRC7_group1_LRRC7OOORP11-379C1v2OOOSGO1P1.fasta	RP11-379C1.2,LRRC7,SGO1P1,
../firstrun/newGeneCopies/LRRC7/LRRC7_partitions/LRRC7_group7.fasta	../firstrun/newGeneCopies/LRRC7/LRRC7_partitions/LRRC7_group7_LRRC7.fasta	LRRC7,
../firstrun/newGeneCopies/LRRC7/LRRC7_partitions/LRRC7_group9.fasta	../firstrun/newGeneCopies/LRRC7/LRRC7_partitions/LRRC7_group9_LRRC7OOOLRRC40.fasta	LRRC7,LRRC40,
../firstrun/newGeneCopies/LRRC7/LRRC7_partitions/LRRC7_group4.fasta	../firstrun/newGeneCopies/LRRC7/LRRC7_partitions/LRRC7_group4_LRRC7OOOPIN1P1OOORN7SL538P.fasta	LRRC7,PIN1P1,RN7SL538P,
../firstrun/newGeneCopies/LRRC7/LRRC7_partitions/LRRC7_group8.fasta	../firstrun/newGeneCopies/LRRC7/LRRC7_partitions/LRRC7_group8_LRRC7OOOLRRC7-AS1.fasta	LRRC7-AS1,LRRC7,
../firstrun/newGeneCopies/SSX3/SSX3_partitions/SSX3_group1.fasta	../firstrun/newGeneCopies/SSX3/SSX3_partitions/SSX3_group1_SSX3OOOAF196972v3OOOAF196972v4.fasta	SSX2B,RP11-344N17.8,AF196972.4,AF196972.3,SSX6P,SSXP4,SSXP3,SSX5,RP11-344N17.12,RP11-38O23.4,SSX7,SSXP1,RP11-552J9.6,SSX2,RP11-552J9.12,SSX4B,RP11-344N17.6,SSX3,SSXP5,RP11-344N17.9,SSX1,SSXP9,SSX8P,RP11-552J9.9,RP13-77O11.8,SSX9P,SSX4,RNU6-707P,RP11-552E4.3,RP11-552E4.2,
../firstrun/newGeneCopies/ZC2HC1B/ZC2HC1B_partitions/ZC2HC1B_group1.fasta	../firstrun/newGeneCopies/ZC2HC1B/ZC2HC1B_partitions/ZC2HC1B_group1_ZC2HC1BOOOLTV1OOORP3-468K18v7.fasta	RP3-468K18.7,LTV1,ZC2HC1B,
../firstrun/newGeneCopies/ZC2HC1B/ZC2HC1B_partitions/ZC2HC1B_group3.fasta	../firstrun/newGeneCopies/ZC2HC1B/ZC2HC1B_partitions/ZC2HC1B_group3_ZC2HC1BOOOPLAGL1OOORP3-468K18v7.fasta	PLAGL1,RP3-468K18.7,ZC2HC1B,
../firstrun/newGeneCopies/PLEKHM1/PLEKHM1_partitions/PLEKHM1_group1.fasta	../firstrun/newGeneCopies/PLEKHM1/PLEKHM1_partitions/PLEKHM1_group1_PLEKHM1OOOPLEKHM1P1OOOAC091132v1.fasta	RP11-583F2.6,RP11-147L13.8,AMZ2,RP11-927P21.11,PLEKHM1P1,ARHGAP27P1-BPTFP1-KPNA2P3,AC091132.1,RP11-583F2.7,PLEKHM1,ARHGAP27P2,RP11-583F2.2,RP11-583F2.1,ARHGAP27,RP11-147L13.15,SLC16A6P1,RP11-156P1.3,MIR4315-2,RP11-927P21.4,MIR6080,MIR4315-1,RNU7-115P,RP11-927P21.6,
../firstrun/newGeneCopies/PGD/PGD_partitions/PGD_group1.fasta	../firstrun/newGeneCopies/PGD/PGD_partitions/PGD_group1_PGDOOORP4-736L20v5.fasta	PGD,RP4-736L20.5,
../firstrun/newGeneCopies/TNKS/TNKS_partitions/TNKS_group37.fasta	../firstrun/newGeneCopies/TNKS/TNKS_partitions/TNKS_group37_TNKSOOOMIR597OOORP11-1081K18v1.fasta	RP11-1081K18.1,RP11-375N15.2,TNKS,MIR597,
../firstrun/newGeneCopies/ZNF607/ZNF607_partitions/ZNF607_group1.fasta	../firstrun/newGeneCopies/ZNF607/ZNF607_partitions/ZNF607_group1_ZNF607OOOCTD-2528L19v4OOOSELENOKP1.fasta	SELENOKP1,CTD-2528L19.4,ZNF607,
../firstrun/newGeneCopies/ETD/ETD_partitions/ETD_group3.fasta	../firstrun/newGeneCopies/ETD/ETD_partitions/ETD_group3_ETDCOOOZNF75D.fasta	ZNF75D,ETDC,
../firstrun/newGeneCopies/ETD/ETD_partitions/ETD_group1.fasta	../firstrun/newGeneCopies/ETD/ETD_partitions/ETD_group1_ETDAOOOETDBOOORP11-85L21v6.fasta	ZNF75D,ETDB,ETDA,SMIM10L2B-AS1,RP11-85L21.6,
../firstrun/newGeneCopies/REM1/REM1_partitions/REM1_group1.fasta	../firstrun/newGeneCopies/REM1/REM1_partitions/REM1_group1_REM1OOODEFB124OOOLINC00028.fasta	REM1,LINC00028,DEFB124,
../firstrun/newGeneCopies/ABHD11/ABHD11_partitions/ABHD11_group1.fasta	../firstrun/newGeneCopies/ABHD11/ABHD11_partitions/ABHD11_group1_ABHD11OOOABHD11-AS1OOORN7SL265P.fasta	ABHD11-AS1,RN7SL265P,ABHD11,
../firstrun/newGeneCopies/IGKV4-1/IGKV4-1_partitions/IGKV4-1_group1.fasta	../firstrun/newGeneCopies/IGKV4-1/IGKV4-1_partitions/IGKV4-1_group1_IGKV4-1.fasta	IGKV4-1,
../firstrun/newGeneCopies/ZNF382/ZNF382_partitions/ZNF382_group1.fasta	../firstrun/newGeneCopies/ZNF382/ZNF382_partitions/ZNF382_group1_ZNF382OOOZNF461OOOZNF529.fasta	ZNF529,ZNF382,ZNF461,
../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group11.fasta	../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group11_DCCOOOLINC01917.fasta	DCC,LINC01917,
../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group10.fasta	../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group10_DCC.fasta	DCC,
../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group1.fasta	../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group1_DCCOOORP11-25O3v1OOORP11-7K9v2.fasta	DCC,RP11-25O3.1,RP11-7K9.2,VN1R76P,
../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group12.fasta	../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group12_DCCOOOLINC01917.fasta	DCC,LINC01917,
../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group3.fasta	../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group3_DCC.fasta	DCC,
../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group8.fasta	../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group8_DCCOOOMIR4528.fasta	DCC,MIR4528,
../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group4.fasta	../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group4_DCC.fasta	DCC,
../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group5.fasta	../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group5_DCC.fasta	DCC,
../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group6.fasta	../firstrun/newGeneCopies/DCC/DCC_partitions/DCC_group6_DCC.fasta	DCC,
../firstrun/newGeneCopies/TBXA2R/TBXA2R_partitions/TBXA2R_group1.fasta	../firstrun/newGeneCopies/TBXA2R/TBXA2R_partitions/TBXA2R_group1_TBXA2ROOOCACTIN-AS1OOOGIPC3.fasta	GIPC3,CACTIN-AS1,TBXA2R,
../firstrun/newGeneCopies/SH2D2A/SH2D2A_partitions/SH2D2A_group1.fasta	../firstrun/newGeneCopies/SH2D2A/SH2D2A_partitions/SH2D2A_group1_SH2D2AOOONTRK1.fasta	SH2D2A,NTRK1,
../firstrun/newGeneCopies/WWP/WWP_partitions/WWP_group1.fasta	../firstrun/newGeneCopies/WWP/WWP_partitions/WWP_group1_WWP1OOOWWP1P1OOOCTD-2284J15v1.fasta	WWP1P1,CTD-2284J15.1,RMDN1,WWP1,
../firstrun/newGeneCopies/WWP/WWP_partitions/WWP_group5.fasta	../firstrun/newGeneCopies/WWP/WWP_partitions/WWP_group5_WWP2OOOCLEC18BOOOCLEC18C.fasta	CLEC18B,RP11-296I10.3,RP11-252A24.5,MIR140,CLEC18C,PDPR,WWP2,
../firstrun/newGeneCopies/WWP/WWP_partitions/WWP_group4.fasta	../firstrun/newGeneCopies/WWP/WWP_partitions/WWP_group4_WWP2OOOCTD-2033A16v2OOONOB1.fasta	CTD-2033A16.2,WWP2,SNORA62,NOB1,
../firstrun/newGeneCopies/ARRDC1/ARRDC1_partitions/ARRDC1_group1.fasta	../firstrun/newGeneCopies/ARRDC1/ARRDC1_partitions/ARRDC1_group1_ARRDC1OOOARRDC1-AS1OOOEHMT1.fasta	EHMT1,RP11-48C7.8,ARRDC1,ARRDC1-AS1,
../firstrun/newGeneCopies/HOXB8/HOXB8_partitions/HOXB8_group1.fasta	../firstrun/newGeneCopies/HOXB8/HOXB8_partitions/HOXB8_group1_HOXB8OOOHOXB-AS3OOOHOXB7.fasta	HOXB7,HOXB-AS3,HOXB8,
../firstrun/newGeneCopies/GMFB/GMFB_partitions/GMFB_group7.fasta	../firstrun/newGeneCopies/GMFB/GMFB_partitions/GMFB_group7_GMFB.fasta	GMFB,
../firstrun/newGeneCopies/GNAI3/GNAI3_partitions/GNAI3_group2.fasta	../firstrun/newGeneCopies/GNAI3/GNAI3_partitions/GNAI3_group2_GNAI3OOOGNAT2OOOMIR197.fasta	GNAI3,GNAT2,RNU6V,MIR197,RP5-1160K1.3,
../firstrun/newGeneCopies/GNAI3/GNAI3_partitions/GNAI3_group1.fasta	../firstrun/newGeneCopies/GNAI3/GNAI3_partitions/GNAI3_group1_GNAI3OOOGPR61.fasta	GPR61,GNAI3,
../firstrun/newGeneCopies/GPRC5B/GPRC5B_partitions/GPRC5B_group1.fasta	../firstrun/newGeneCopies/GPRC5B/GPRC5B_partitions/GPRC5B_group1_GPRC5BOOOIQCK.fasta	IQCK,GPRC5B,
../firstrun/newGeneCopies/SRSF3/SRSF3_partitions/SRSF3_group4.fasta	../firstrun/newGeneCopies/SRSF3/SRSF3_partitions/SRSF3_group4_SRSF3.fasta	SRSF3,
../firstrun/newGeneCopies/PNPLA3/PNPLA3_partitions/PNPLA3_group7.fasta	../firstrun/newGeneCopies/PNPLA3/PNPLA3_partitions/PNPLA3_group7_PNPLA3OOORPL35AP36OOOSAMM50.fasta	SAMM50,RPL35AP36,PNPLA3,
../firstrun/newGeneCopies/ELOA2/ELOA2_partitions/ELOA2_group1.fasta	../firstrun/newGeneCopies/ELOA2/ELOA2_partitions/ELOA2_group1_ELOA2OOOELOA3OOOELOA3B.fasta	ELOA2,ELOA3,ELOA3B,ELOA3CP,ELOA3D,KATNAL2,
../firstrun/newGeneCopies/SYDE1/SYDE1_partitions/SYDE1_group1.fasta	../firstrun/newGeneCopies/SYDE1/SYDE1_partitions/SYDE1_group1_SYDE1OOOILVBL.fasta	SYDE1,ILVBL,
../firstrun/newGeneCopies/TBC1D21/TBC1D21_partitions/TBC1D21_group1.fasta	../firstrun/newGeneCopies/TBC1D21/TBC1D21_partitions/TBC1D21_group1_TBC1D21OOORP11-24D15v1.fasta	TBC1D21,RP11-24D15.1,
../firstrun/newGeneCopies/ZNF669/ZNF669_partitions/ZNF669_group1.fasta	../firstrun/newGeneCopies/ZNF669/ZNF669_partitions/ZNF669_group1_ZNF669OOORP11-107G24v4.fasta	ZNF669,RP11-107G24.4,
../firstrun/newGeneCopies/STRC/STRC_partitions/STRC_group1.fasta	../firstrun/newGeneCopies/STRC/STRC_partitions/STRC_group1_STRCOOOSTRCP1OOOCKMT1A.fasta	STRC,CKMT1A,STRCP1,RNU6-353P,RNU6-554P,RP11-315A19.1,CKMT1B,
../firstrun/newGeneCopies/TCHH/TCHH_partitions/TCHH_group2.fasta	../firstrun/newGeneCopies/TCHH/TCHH_partitions/TCHH_group2_TCHH.fasta	TCHH,
../firstrun/newGeneCopies/TCHH/TCHH_partitions/TCHH_group1.fasta	../firstrun/newGeneCopies/TCHH/TCHH_partitions/TCHH_group1_TCHHL1OOOAC130709v1OOOAPLF.fasta	RP11-353M1.5,RP11-354I13.2,SPTLC1P5,MTCO3P40,RP11-440J4.2,SPTLC1P2,MTND3P23,MTATP6P29,TCHHL1,RP11-20P5.2,RP11-613H2.3,LINGO2,SPTLC1P1,AC130709.1,RP11-408O13.4,SPTLC1,MTCO3P29,RP11-457D20.1,RP11-192P3.5,RP11-613H2.1,RP11-15B24.5,RP11-100G15.12,RP11-184C23.4,RP11-15B24.3,SPTLC1P3,ZEB1,APLF,MTND4LP7,NPAP1L,
../firstrun/newGeneCopies/CCDC125/CCDC125_partitions/CCDC125_group2.fasta	../firstrun/newGeneCopies/CCDC125/CCDC125_partitions/CCDC125_group2_CCDC125OOOCDK7OOOCFL1P5.fasta	CFL1P5,CCDC125,CHCHD2P2,CDK7,
../firstrun/newGeneCopies/C3orf/C3orf_partitions/C3orf_group17.fasta	../firstrun/newGeneCopies/C3orf/C3orf_partitions/C3orf_group17_C3orf56OOORP11-305F5v3OOOY_RNA.fasta	C3orf56,RP11-305F5.3,Y_RNA,
../firstrun/newGeneCopies/MAPK13/MAPK13_partitions/MAPK13_group1.fasta	../firstrun/newGeneCopies/MAPK13/MAPK13_partitions/MAPK13_group1_MAPK13OOORP1-179N16v6.fasta	RP1-179N16.6,MAPK13,
../firstrun/newGeneCopies/PTCD3/PTCD3_partitions/PTCD3_group1.fasta	../firstrun/newGeneCopies/PTCD3/PTCD3_partitions/PTCD3_group1_PTCD3OOOIMMTOOOPOLR1A.fasta	POLR1A,PTCD3,SNORD94,IMMT,
../firstrun/newGeneCopies/MRPL40/MRPL40_partitions/MRPL40_group2.fasta	../firstrun/newGeneCopies/MRPL40/MRPL40_partitions/MRPL40_group2_MRPL40OOOC22orf39OOOHIRA.fasta	HIRA,C22orf39,MRPL40,
../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group35.fasta	../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group35_DYM.fasta	DYM,
../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group37.fasta	../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group37_DYMOOORP11-110H1v10OOORP11-110H1v9.fasta	RP11-110H1.9,DYM,RP11-110H1.10,
../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group36.fasta	../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group36_DYM.fasta	DYM,
../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group30.fasta	../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group30_DYMOOOMIR4744OOORP11-15F12v1.fasta	RP11-15F12.1,RP11-15F12.3,MIR4744,DYM,
../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group33.fasta	../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group33_DYMOOORP11-30L3v2.fasta	DYM,RP11-30L3.2,
../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group32.fasta	../firstrun/newGeneCopies/DYM/DYM_partitions/DYM_group32_DYM.fasta	DYM,
../firstrun/newGeneCopies/LAS1L/LAS1L_partitions/LAS1L_group196.fasta	../firstrun/newGeneCopies/LAS1L/LAS1L_partitions/LAS1L_group196_LAS1LOOOAP1M2P1OOOMSN.fasta	MSN,LAS1L,AP1M2P1,ZC3H12B,
../firstrun/newGeneCopies/BICD1/BICD1_partitions/BICD1_group6.fasta	../firstrun/newGeneCopies/BICD1/BICD1_partitions/BICD1_group6_BICD1OOORP11-817I4v2.fasta	RP11-817I4.2,BICD1,
../firstrun/newGeneCopies/BICD1/BICD1_partitions/BICD1_group4.fasta	../firstrun/newGeneCopies/BICD1/BICD1_partitions/BICD1_group4_BICD1OOORP11-817I4v1.fasta	RP11-817I4.1,BICD1,
../firstrun/newGeneCopies/BICD1/BICD1_partitions/BICD1_group2.fasta	../firstrun/newGeneCopies/BICD1/BICD1_partitions/BICD1_group2_BICD1OOORP11-843B15v2OOORP11-843B15v3.fasta	RP11-956A19.1,RP11-843B15.2,RP11-843B15.4,RP11-843B15.3,BICD1,
../firstrun/newGeneCopies/PANK4/PANK4_partitions/PANK4_group1.fasta	../firstrun/newGeneCopies/PANK4/PANK4_partitions/PANK4_group1_PANK4OOOHES5.fasta	HES5,PANK4,
../firstrun/newGeneCopies/ALDH2/ALDH2_partitions/ALDH2_group33.fasta	../firstrun/newGeneCopies/ALDH2/ALDH2_partitions/ALDH2_group33_ALDH2OOOMIR6761OOORP11-162P23v2.fasta	ALDH2,MIR6761,RP11-162P23.2,
../firstrun/newGeneCopies/GNAT2/GNAT2_partitions/GNAT2_group1.fasta	../firstrun/newGeneCopies/GNAT2/GNAT2_partitions/GNAT2_group1_GNAT2OOOAMPD2OOOGNAI3.fasta	AMPD2,GNAI3,GNAT2,
../firstrun/newGeneCopies/TMEM127/TMEM127_partitions/TMEM127_group1.fasta	../firstrun/newGeneCopies/TMEM127/TMEM127_partitions/TMEM127_group1_TMEM127OOOCIAO1.fasta	TMEM127,CIAO1,
../firstrun/newGeneCopies/CCDC63/CCDC63_partitions/CCDC63_group15.fasta	../firstrun/newGeneCopies/CCDC63/CCDC63_partitions/CCDC63_group15_CCDC63OOORP1-74B13v2.fasta	RP1-74B13.2,CCDC63,
../firstrun/newGeneCopies/FAM156/FAM156_partitions/FAM156_group1.fasta	../firstrun/newGeneCopies/FAM156/FAM156_partitions/FAM156_group1_FAM156A.fasta	FAM156A,
../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group205.fasta	../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group205_C11orf24OOORP11-856M9v1.fasta	RP11-856M9.1,C11orf24,
../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group178.fasta	../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group178_C11orf16OOOAKIP1.fasta	C11orf16,AKIP1,
../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group201.fasta	../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group201_C11orf86OOOPC.fasta	PC,C11orf86,
../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group199.fasta	../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group199_C11orf80OOOC1QBPP2OOOFTLP6.fasta	C11orf80,FTLP6,RCE1,C1QBPP2,SPTBN2,
../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group177.fasta	../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group177_C11orf42OOOFAM160A2OOORP11-290F24v6.fasta	RP11-290F24.6,FAM160A2,C11orf42,
../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group197.fasta	../firstrun/newGeneCopies/C11orf/C11orf_partitions/C11orf_group197_C11orf68OOODRAP1.fasta	C11orf68,DRAP1,
../firstrun/newGeneCopies/CPLX3/CPLX3_partitions/CPLX3_group1.fasta	../firstrun/newGeneCopies/CPLX3/CPLX3_partitions/CPLX3_group1_CPLX3OOOLMAN1LOOORP11-414J4v2.fasta	LMAN1L,CPLX3,ULK3,RP11-414J4.2,
../firstrun/newGeneCopies/CT45A/CT45A_partitions/CT45A_group1.fasta	../firstrun/newGeneCopies/CT45A/CT45A_partitions/CT45A_group1_CT45A1OOOCT45A10OOOCT45A11P.fasta	CT45A6,CT45A11P,CT45A5,CT45A1,CT45A9,CT45A3,SAGE1,CT45A7,CT45A2,CT45A8,CT45A10,
../firstrun/newGeneCopies/NOP14/NOP14_partitions/NOP14_group1.fasta	../firstrun/newGeneCopies/NOP14/NOP14_partitions/NOP14_group1_NOP14OOONOP14-AS1OOOGRK4.fasta	NOP14,GRK4,NOP14-AS1,MFSD10,
../firstrun/newGeneCopies/SPACA5/SPACA5_partitions/SPACA5_group1.fasta	../firstrun/newGeneCopies/SPACA5/SPACA5_partitions/SPACA5_group1_SPACA5OOOSPACA5BOOORP11-38O23v3.fasta	ZNF182,ZNF81,SPACA5B,ZNF630,RP11-38O23.3,SPACA5,
../firstrun/newGeneCopies/GAS2/GAS2_partitions/GAS2_group10.fasta	../firstrun/newGeneCopies/GAS2/GAS2_partitions/GAS2_group10_GAS2L1OOOAC002059v10OOORASL10A.fasta	RASL10A,AC002059.10,GAS2L1,
../firstrun/newGeneCopies/TRIM73/TRIM73_partitions/TRIM73_group1.fasta	../firstrun/newGeneCopies/TRIM73/TRIM73_partitions/TRIM73_group1_TRIM73OOOAC005488v11OOOAC006014v8.fasta	AC005488.11,AC006014.8,RP11-483G21.3,STAG3L1,TRIM74,NSUN5P1,NSUN5,FKBP6,TRIM50,NSUN5P2,STAG3L3,POM121,TRIM73,CH17-264B6.5,
../firstrun/newGeneCopies/ZP2/ZP2_partitions/ZP2_group1.fasta	../firstrun/newGeneCopies/ZP2/ZP2_partitions/ZP2_group1_ZP2OOOAF001550v7.fasta	AF001550.7,ZP2,
../firstrun/newGeneCopies/SOX7/SOX7_partitions/SOX7_group1.fasta	../firstrun/newGeneCopies/SOX7/SOX7_partitions/SOX7_group1_SOX7OOOCTD-2135J3v3OOOPINX1.fasta	SOX7,CTD-2135J3.3,PINX1,
../firstrun/newGeneCopies/FAM133/FAM133_partitions/FAM133_group20.fasta	../firstrun/newGeneCopies/FAM133/FAM133_partitions/FAM133_group20_FAM133A.fasta	FAM133A,
../firstrun/newGeneCopies/FAM133/FAM133_partitions/FAM133_group19.fasta	../firstrun/newGeneCopies/FAM133/FAM133_partitions/FAM133_group19_FAM133AOOONAP1L3.fasta	NAP1L3,FAM133A,
../firstrun/newGeneCopies/ACTA2/ACTA2_partitions/ACTA2_group2.fasta	../firstrun/newGeneCopies/ACTA2/ACTA2_partitions/ACTA2_group2_ACTA2OOOENSG10010138034v1OOOFAS.fasta	ACTA2,ENSG10010138034.1,FAS,STAMBPL1,FAS-AS1,
../firstrun/newGeneCopies/ACTA2/ACTA2_partitions/ACTA2_group1.fasta	../firstrun/newGeneCopies/ACTA2/ACTA2_partitions/ACTA2_group1_ACTA2OOOACTA2-AS1OOOSTAMBPL1.fasta	ACTA2-AS1,STAMBPL1,ACTA2,
../firstrun/newGeneCopies/CCT6A/CCT6A_partitions/CCT6A_group2.fasta	../firstrun/newGeneCopies/CCT6A/CCT6A_partitions/CCT6A_group2_CCT6AOOOCCT6P1OOOCCT6P3.fasta	SNORA15B-1,SNORA22,CCT6P3,SNORA15,SUMF2,PSPH,CCT6P1,CCT6A,SNORA22C,RP11-479O9.4,RP11-460N20.4,SNORA15B-2,RP11-479O9.3,SNORA22B,
../firstrun/newGeneCopies/RP11-514O12.4/RP11-514O12.4_partitions/RP11-514O12.4_group7.fasta	../firstrun/newGeneCopies/RP11-514O12.4/RP11-514O12.4_partitions/RP11-514O12.4_group7_RP11-514O12v4OOORNASET2OOORPS6KA2.fasta	RPS6KA2-AS1,RPS6KA2,RNASET2,RP11-514O12.4,
../firstrun/newGeneCopies/FAM246A/FAM246A_partitions/FAM246A_group1.fasta	../firstrun/newGeneCopies/FAM246A/FAM246A_partitions/FAM246A_group1_FAM246AOOOCA15P1OOOCA15P2.fasta	DGCR2,CA15P1,FAM246C,DGCR10,LINC01651,FAM246B,CA15P2,DGCR5,FAM246A,
../firstrun/newGeneCopies/HEXIM/HEXIM_partitions/HEXIM_group1.fasta	../firstrun/newGeneCopies/HEXIM/HEXIM_partitions/HEXIM_group1_HEXIM1OOOHEXIM2OOOAC002117v1.fasta	HEXIM2,AC002117.1,HEXIM1,RP13-890H12.2,AC142472.6,
../firstrun/newGeneCopies/PDF/PDF_partitions/PDF_group1.fasta	../firstrun/newGeneCopies/PDF/PDF_partitions/PDF_group1_PDFOOOCOG8OOORP11-343C2v11.fasta	COG8,RP11-343C2.12,PDF,RP11-343C2.7,VPS4A,RP11-343C2.11,RP11-343C2.9,
../firstrun/newGeneCopies/PSPH/PSPH_partitions/PSPH_group1.fasta	../firstrun/newGeneCopies/PSPH/PSPH_partitions/PSPH_group1_PSPHOOOPSPHP1OOOCCT6A.fasta	PSPH,CCT6A,SNORA22B,PSPHP1,
../firstrun/newGeneCopies/MAFA/MAFA_partitions/MAFA_group1.fasta	../firstrun/newGeneCopies/MAFA/MAFA_partitions/MAFA_group1_MAFAOOOMAFA-AS1OOORP11-909N17v2.fasta	RP11-909N17.2,MAFA-AS1,MAFA,
../firstrun/newGeneCopies/MAGEA11/MAGEA11_partitions/MAGEA11_group1.fasta	../firstrun/newGeneCopies/MAGEA11/MAGEA11_partitions/MAGEA11_group1_MAGEA11OOORP5-1014O16v1OOORP5-1014O16v10.fasta	RP5-1014O16.9,TMEM185AP1,MAGEA11,RP5-1014O16.1,RP5-1014O16.10,
../firstrun/newGeneCopies/ZBTB12/ZBTB12_partitions/ZBTB12_group2.fasta	../firstrun/newGeneCopies/ZBTB12/ZBTB12_partitions/ZBTB12_group2_ZBTB12OOOC2OOOCYP21A2.fasta	ZBTB12,EHMT2,CYP21A2,C2,
../firstrun/newGeneCopies/EIF3A/EIF3A_partitions/EIF3A_group2.fasta	../firstrun/newGeneCopies/EIF3A/EIF3A_partitions/EIF3A_group2_EIF3AOOOENSG10010140089v1OOONANOS1.fasta	NANOS1,SNORA19,ENSG10010140089.1,EIF3A,
../firstrun/newGeneCopies/ORAI/ORAI_partitions/ORAI_group1.fasta	../firstrun/newGeneCopies/ORAI/ORAI_partitions/ORAI_group1_ORAI2OOOALKBH4OOORP11-514P8v2.fasta	ORAI2,ALKBH4,RP11-514P8.2,
../firstrun/newGeneCopies/ORAI/ORAI_partitions/ORAI_group2.fasta	../firstrun/newGeneCopies/ORAI/ORAI_partitions/ORAI_group2_ORAI1OOOMORN3.fasta	ORAI1,MORN3,
../firstrun/newGeneCopies/DGCR2/DGCR2_partitions/DGCR2_group3.fasta	../firstrun/newGeneCopies/DGCR2/DGCR2_partitions/DGCR2_group3_DGCR2OOOAC004471v10OOOAC004471v9.fasta	AC004471.10,AC004471.9,DGCR2,TSSK1A,
../firstrun/newGeneCopies/DGCR2/DGCR2_partitions/DGCR2_group2.fasta	../firstrun/newGeneCopies/DGCR2/DGCR2_partitions/DGCR2_group2_DGCR2OOOAC004461v4OOOCA15P1.fasta	DGCR11,DGCR12,DGCR2,LINC01651,FAM246A,FAM246B,AC004461.4,Y_RNA,CA15P2,CA15P1,
../firstrun/newGeneCopies/TRIM17/TRIM17_partitions/TRIM17_group1.fasta	../firstrun/newGeneCopies/TRIM17/TRIM17_partitions/TRIM17_group1_TRIM17OOORP11-245P10v4OOOTRIM11.fasta	TRIM17,TRIM11,RP11-245P10.4,
../firstrun/newGeneCopies/NATD1/NATD1_partitions/NATD1_group1.fasta	../firstrun/newGeneCopies/NATD1/NATD1_partitions/NATD1_group1_NATD1.fasta	NATD1,
../firstrun/newGeneCopies/ABCA2/ABCA2_partitions/ABCA2_group1.fasta	../firstrun/newGeneCopies/ABCA2/ABCA2_partitions/ABCA2_group1_ABCA2OOOC9orf139OOOFUT7.fasta	C9orf139,ABCA2,FUT7,RP11-229P13.27,
../firstrun/newGeneCopies/LRRC56/LRRC56_partitions/LRRC56_group1.fasta	../firstrun/newGeneCopies/LRRC56/LRRC56_partitions/LRRC56_group1_LRRC56OOOHRASOOOLMNTD2.fasta	LMNTD2-AS1,HRAS,LRRC56,LMNTD2,
../firstrun/newGeneCopies/NLRP2/NLRP2_partitions/NLRP2_group6.fasta	../firstrun/newGeneCopies/NLRP2/NLRP2_partitions/NLRP2_group6_NLRP2OOOCTC-550B14v1OOOCTC-550B14v10.fasta	NLRP7,CTC-550B14.1,NLRP2,CTC-550B14.10,
../firstrun/newGeneCopies/PWWP2/PWWP2_partitions/PWWP2_group3.fasta	../firstrun/newGeneCopies/PWWP2/PWWP2_partitions/PWWP2_group3_PWWP2BOOORP11-432J24v2.fasta	RP11-432J24.2,PWWP2B,
../firstrun/newGeneCopies/PWWP2/PWWP2_partitions/PWWP2_group2.fasta	../firstrun/newGeneCopies/PWWP2/PWWP2_partitions/PWWP2_group2_PWWP2A.fasta	PWWP2A,
../firstrun/newGeneCopies/PWWP2/PWWP2_partitions/PWWP2_group1.fasta	../firstrun/newGeneCopies/PWWP2/PWWP2_partitions/PWWP2_group1_PWWP2AOOOTTC1.fasta	TTC1,PWWP2A,
../firstrun/newGeneCopies/TCIRG1/TCIRG1_partitions/TCIRG1_group1.fasta	../firstrun/newGeneCopies/TCIRG1/TCIRG1_partitions/TCIRG1_group1_TCIRG1OOOCHKAOOOMIR6753.fasta	RP11-802E16.3,CHKA,NDUFS8,MIR6753,TCIRG1,
../firstrun/newGeneCopies/TMEM167/TMEM167_partitions/TMEM167_group1.fasta	../firstrun/newGeneCopies/TMEM167/TMEM167_partitions/TMEM167_group1_TMEM167BOOOTMEM167B-DT.fasta	TMEM167B-DT,TMEM167B,
../firstrun/newGeneCopies/RFPL4/RFPL4_partitions/RFPL4_group5.fasta	../firstrun/newGeneCopies/RFPL4/RFPL4_partitions/RFPL4_group5_RFPL4AOOORFPL4AL1OOORFPL4AP1.fasta	RFPL4AL1,RFPL4AP1,RFPL4A,
../firstrun/newGeneCopies/CYFIP1/CYFIP1_partitions/CYFIP1_group1.fasta	../firstrun/newGeneCopies/CYFIP1/CYFIP1_partitions/CYFIP1_group1_CYFIP1OOONIPA2OOOTUBGCP5.fasta	TUBGCP5,CYFIP1,NIPA2,
../firstrun/newGeneCopies/ETHE1/ETHE1_partitions/ETHE1_group1.fasta	../firstrun/newGeneCopies/ETHE1/ETHE1_partitions/ETHE1_group1_ETHE1OOOPHLDB3OOOZNF575.fasta	PHLDB3,ETHE1,ZNF575,
../firstrun/newGeneCopies/BRK1/BRK1_partitions/BRK1_group1.fasta	../firstrun/newGeneCopies/BRK1/BRK1_partitions/BRK1_group1_BRK1.fasta	BRK1,
../firstrun/newGeneCopies/DEFA5/DEFA5_partitions/DEFA5_group1.fasta	../firstrun/newGeneCopies/DEFA5/DEFA5_partitions/DEFA5_group1_DEFA5.fasta	DEFA5,
../firstrun/newGeneCopies/USF1/USF1_partitions/USF1_group1.fasta	../firstrun/newGeneCopies/USF1/USF1_partitions/USF1_group1_USF1OOOARHGAP30OOORP11-544M22v13.fasta	USF1,RP11-544M22.13,TSTD1,ARHGAP30,
../firstrun/newGeneCopies/HSFX/HSFX_partitions/HSFX_group1.fasta	../firstrun/newGeneCopies/HSFX/HSFX_partitions/HSFX_group1_HSFX3OOOHSFX4OOOEOLA1.fasta	HSFX4,HSFX3,EOLA1,EOLA2,
../firstrun/newGeneCopies/HSFX/HSFX_partitions/HSFX_group2.fasta	../firstrun/newGeneCopies/HSFX/HSFX_partitions/HSFX_group2_HSFX1OOOHSFX2OOOMAGEA9.fasta	HSFX1,TMEM185A,MAGEA9B,MAGEA9,TMEM185AP1,HSFX2,
../firstrun/newGeneCopies/TRNAU1AP/TRNAU1AP_partitions/TRNAU1AP_group1.fasta	../firstrun/newGeneCopies/TRNAU1AP/TRNAU1AP_partitions/TRNAU1AP_group1_TRNAU1APOOORP4-669K10v8OOOSNHG12.fasta	SNORA44,SNORA16A,RP4-669K10.8,SNORA61,TRNAU1AP,SNORD99,SNHG12,
../firstrun/newGeneCopies/UQCRQ/UQCRQ_partitions/UQCRQ_group1.fasta	../firstrun/newGeneCopies/UQCRQ/UQCRQ_partitions/UQCRQ_group1_UQCRQOOOGDF9OOOLEAP2.fasta	UQCRQ,GDF9,LEAP2,
../firstrun/newGeneCopies/ACOT2/ACOT2_partitions/ACOT2_group1.fasta	../firstrun/newGeneCopies/ACOT2/ACOT2_partitions/ACOT2_group1_ACOT2OOOACOT1OOOHEATR4.fasta	ACOT1,HEATR4,ACOT2,RP3-414A15.10,NT5CP1,NT5CP2,
../firstrun/newGeneCopies/CELF3/CELF3_partitions/CELF3_group1.fasta	../firstrun/newGeneCopies/CELF3/CELF3_partitions/CELF3_group1_CELF3OOORIIAD1OOORP11-98D18v1.fasta	SNX27,CELF3,RP11-98D18.1,RIIAD1,
../firstrun/newGeneCopies/TMEM106B/TMEM106B_partitions/TMEM106B_group1.fasta	../firstrun/newGeneCopies/TMEM106B/TMEM106B_partitions/TMEM106B_group1_TMEM106B.fasta	TMEM106B,
../firstrun/newGeneCopies/GGTLC/GGTLC_partitions/GGTLC_group6.fasta	../firstrun/newGeneCopies/GGTLC/GGTLC_partitions/GGTLC_group6_GGTLC1OOOGGTLC2OOOGGTLC3.fasta	FAM247B,Metazoa_SRP,GGT2,ENSG00000278633,GGT4P,GGTLC4P,GGT1,FAM247A,GGTLC5P,POM121L1P,GGT5,KB-1995A5.4,GGT3P,KB-1995A5.5,BCRP5,BCRP3,GGTLC3,BCRP2,RP5-831C21.1,POM121L9P,TMEM191C,POM121L7P,POM121L10P,RP11-341D18.9,KB-1995A5.6,POM121L3P,GGTLC1,KB-1592A4.15,GGTLC2,POM121L8P,POM121L4P,AC008132.13,ENSG00000276017,
../firstrun/newGeneCopies/G6PD/G6PD_partitions/G6PD_group1.fasta	../firstrun/newGeneCopies/G6PD/G6PD_partitions/G6PD_group1_G6PDOOOIKBKG.fasta	G6PD,IKBKG,
../firstrun/newGeneCopies/PRIM/PRIM_partitions/PRIM_group2.fasta	../firstrun/newGeneCopies/PRIM/PRIM_partitions/PRIM_group2_PRIM2OOOABBA01000934v1OOOMIR548U.fasta	PRIM2,ABBA01000934.1,RP3-401D24.1,MIR548U,RP1-71H19.2,
../firstrun/newGeneCopies/CCNB1/CCNB1_partitions/CCNB1_group6.fasta	../firstrun/newGeneCopies/CCNB1/CCNB1_partitions/CCNB1_group6_CCNB1.fasta	CCNB1,
../firstrun/newGeneCopies/PROZ/PROZ_partitions/PROZ_group1.fasta	../firstrun/newGeneCopies/PROZ/PROZ_partitions/PROZ_group1_PROZOOORP11-98F14v11.fasta	RP11-98F14.11,PROZ,
../firstrun/newGeneCopies/CLIC3/CLIC3_partitions/CLIC3_group1.fasta	../firstrun/newGeneCopies/CLIC3/CLIC3_partitions/CLIC3_group1_CLIC3OOOPAXX.fasta	PAXX,CLIC3,
../firstrun/newGeneCopies/ETV2/ETV2_partitions/ETV2_group1.fasta	../firstrun/newGeneCopies/ETV2/ETV2_partitions/ETV2_group1_ETV2OOOCOX6B1OOORBM42.fasta	RBM42,COX6B1,ETV2,
../firstrun/newGeneCopies/HHIPL1/HHIPL1_partitions/HHIPL1_group2.fasta	../firstrun/newGeneCopies/HHIPL1/HHIPL1_partitions/HHIPL1_group2_HHIPL1.fasta	HHIPL1,
../firstrun/newGeneCopies/MYOT/MYOT_partitions/MYOT_group1.fasta	../firstrun/newGeneCopies/MYOT/MYOT_partitions/MYOT_group1_MYOTOOOPKD2L2OOORP11-381K20v2.fasta	RP11-381K20.2,PKD2L2,MYOT,
../firstrun/newGeneCopies/UPK3B/UPK3B_partitions/UPK3B_group1.fasta	../firstrun/newGeneCopies/UPK3B/UPK3B_partitions/UPK3B_group1_UPK3BL1OOOUPK3BL2OOOAC004951v5.fasta	UPK3BL1,AC004951.5,RP11-577H5.5,POLR2J3,RP11-514P8.6,RP11-514P8.7,POLR2J4,RP11-514P8.10,UPK3BL2,RP5-1165K10.2,AC093668.2,
../firstrun/newGeneCopies/C12orf/C12orf_partitions/C12orf_group110.fasta	../firstrun/newGeneCopies/C12orf/C12orf_partitions/C12orf_group110_C12orf43OOOHNF1AOOOOASL.fasta	C12orf43,HNF1A,OASL,
../firstrun/newGeneCopies/C12orf/C12orf_partitions/C12orf_group111.fasta	../firstrun/newGeneCopies/C12orf/C12orf_partitions/C12orf_group111_C12orf65OOOAC068768v1OOOCDK2AP1.fasta	MPHOSPH9,RP11-282O18.7,CDK2AP1,C12orf65,AC068768.1,
../firstrun/newGeneCopies/C12orf/C12orf_partitions/C12orf_group81.fasta	../firstrun/newGeneCopies/C12orf/C12orf_partitions/C12orf_group81_C12orf40OOOSLC2A13.fasta	SLC2A13,C12orf40,
../firstrun/newGeneCopies/C12orf/C12orf_partitions/C12orf_group82.fasta	../firstrun/newGeneCopies/C12orf/C12orf_partitions/C12orf_group82_C12orf40OOOSLC2A13.fasta	SLC2A13,C12orf40,
../firstrun/newGeneCopies/C12orf/C12orf_partitions/C12orf_group79.fasta	../firstrun/newGeneCopies/C12orf/C12orf_partitions/C12orf_group79_C12orf40OOOENSG10010139722v1OOOSLC2A13.fasta	SLC2A13,C12orf40,ENSG10010139722.1,
../firstrun/newGeneCopies/HLA-DM/HLA-DM_partitions/HLA-DM_group1.fasta	../firstrun/newGeneCopies/HLA-DM/HLA-DM_partitions/HLA-DM_group1_HLA-DMAOOOHLA-DMBOOOBRD2.fasta	HLA-DMB,XXbac-BPG181M17.4,XXbac-BPG181M17.6,BRD2,HLA-DMA,XXbac-BPG181M17.5,
../firstrun/newGeneCopies/SMOC2/SMOC2_partitions/SMOC2_group1.fasta	../firstrun/newGeneCopies/SMOC2/SMOC2_partitions/SMOC2_group1_SMOC2.fasta	SMOC2,
../firstrun/newGeneCopies/SMOC2/SMOC2_partitions/SMOC2_group3.fasta	../firstrun/newGeneCopies/SMOC2/SMOC2_partitions/SMOC2_group3_SMOC2.fasta	SMOC2,
../firstrun/newGeneCopies/JUP/JUP_partitions/JUP_group1.fasta	../firstrun/newGeneCopies/JUP/JUP_partitions/JUP_group1_JUP.fasta	JUP,
../firstrun/newGeneCopies/GPRASP/GPRASP_partitions/GPRASP_group1.fasta	../firstrun/newGeneCopies/GPRASP/GPRASP_partitions/GPRASP_group1_ARMCX5-GPRASP2OOOGPRASP1OOOGPRASP2.fasta	ARMCX5-GPRASP2,GPRASP2,BHLHB9,RP4-769N13.9,GPRASP1,RP4-769N13.7,
../firstrun/newGeneCopies/USP34/USP34_partitions/USP34_group2.fasta	../firstrun/newGeneCopies/USP34/USP34_partitions/USP34_group2_USP34.fasta	USP34,
../firstrun/newGeneCopies/USP34/USP34_partitions/USP34_group3.fasta	../firstrun/newGeneCopies/USP34/USP34_partitions/USP34_group3_USP34OOOAC016894v1OOOSNORA70B.fasta	AC016894.1,SNORA70B,USP34,
../firstrun/newGeneCopies/USP34/USP34_partitions/USP34_group1.fasta	../firstrun/newGeneCopies/USP34/USP34_partitions/USP34_group1_USP34OOOAHSA2POOORP11-479F13v1.fasta	AHSA2P,USP34,RP11-493E12.2,RP11-479F13.1,
../firstrun/newGeneCopies/USP34/USP34_partitions/USP34_group4.fasta	../firstrun/newGeneCopies/USP34/USP34_partitions/USP34_group4_USP34OOOUSP34-DTOOOXPO1.fasta	USP34-DT,USP34,XPO1,
../firstrun/newGeneCopies/ZNF527/ZNF527_partitions/ZNF527_group1.fasta	../firstrun/newGeneCopies/ZNF527/ZNF527_partitions/ZNF527_group1_ZNF527OOOZNF875.fasta	ZNF875,ZNF527,
../firstrun/newGeneCopies/ACHE/ACHE_partitions/ACHE_group1.fasta	../firstrun/newGeneCopies/ACHE/ACHE_partitions/ACHE_group1_ACHEOOOSRRTOOOUFSP1.fasta	SRRT,UFSP1,ACHE,
../firstrun/newGeneCopies/ECEL1/ECEL1_partitions/ECEL1_group4.fasta	../firstrun/newGeneCopies/ECEL1/ECEL1_partitions/ECEL1_group4_ECEL1.fasta	ECEL1,
../firstrun/newGeneCopies/ZDHHC11/ZDHHC11_partitions/ZDHHC11_group1.fasta	../firstrun/newGeneCopies/ZDHHC11/ZDHHC11_partitions/ZDHHC11_group1_ZDHHC11OOOZDHHC11BOOOBRD9.fasta	ZDHHC11B,BRD9P2,ZDHHC11,TPPP,CTD-2589H19.7,SPCS2P3,BRD9,
../firstrun/newGeneCopies/BET1L/BET1L_partitions/BET1L_group2.fasta	../firstrun/newGeneCopies/BET1L/BET1L_partitions/BET1L_group2_BET1LOOOABC7-481722F1v2OOOCTC-338M12v13.fasta	RP11-206L10.17,SEPTIN7P13,RP11-384K6.6,CTC-338M12.13,FAM157A,DDX11L17,RIC8A,CTD-3113P16.11,GTF2IP20,SEPTIN14P8,FAM157C,RP11-694O4.1,RP11-274B21.13,MIR6743,RP11-304M2.5,RP11-482G13.1,LINC01347,SEPTIN7P2,CTC-338M12.9,RP11-34P13.13,LINC01409,BET1L,RP11-274B21.14,ODF3,RP11-274B21.1,LINC01002,SEPTIN7P14,RP11-504P24.9,GTF2IP12,HHIPL2,RNU6-177P,RP11-585F1.6,SEPTIN7P9,SCGB1C2,RP11-291L22.9,ABC7-481722F1.2,RP11-378J18.10,RP11-356C4.5,SCGB1C1,GTF2IP13,RP11-1228E12.2,FAM157B,RP11-206L10.2,RP11-304M2.3,RP11-33B1.3,
../firstrun/newGeneCopies/FAM86/FAM86_partitions/FAM86_group1.fasta	../firstrun/newGeneCopies/FAM86/FAM86_partitions/FAM86_group1_FAM86B1OOOFAM86B2OOOFAM86B3P.fasta	ALG1L2,FAM90A26,TSSC2,ALG1L9P,RP11-1396O13.23,ALG1,FAM86MP,ALG1L5P,ALG1L8P,ALG1L3P,RP11-666A20.4,RP11-264E23.4,ENSG00000285397,OR7E11P,FAM86B1,FAM86FP,FAM86KP,LINC02018,ALG1L11P,FAM86B2,LINC02021,LINC02449,EEF2KMT,RP11-90D4.7,FAM86JP,Metazoa_SRP,FAM86LP,LINC02614,ALG1L7P,RP11-10K17.6,ALG1L13P,FAM86C1P,ALG1L14P,ENSG00000285316,ALG1L,FAM86GP,AC145124.2,FAM86DP,FAM86C2P,ENSG00000288396,RP11-740N7.4,FAM86HP,FAM86B3P,ALG1L6P,FAM85B,FAM90A1,LINC02014,ALG1L10P,ALG1L12P,RP11-10K17.3,FAM66D,FAM86EP,AC226119.5,
../firstrun/newGeneCopies/SGCG/SGCG_partitions/SGCG_group1.fasta	../firstrun/newGeneCopies/SGCG/SGCG_partitions/SGCG_group1_SGCGOOORNU6-58POOOTATDN2P3.fasta	RNU6-58P,TATDN2P3,SGCG,
../firstrun/newGeneCopies/SGCG/SGCG_partitions/SGCG_group3.fasta	../firstrun/newGeneCopies/SGCG/SGCG_partitions/SGCG_group3_SGCGOOOSACSOOOSDAD1P4.fasta	SACS,SGCG,SDAD1P4,
../firstrun/newGeneCopies/ZP3/ZP3_partitions/ZP3_group2.fasta	../firstrun/newGeneCopies/ZP3/ZP3_partitions/ZP3_group2_POMZP3OOOZP3OOOAC004980v7.fasta	AC004980.7,ZP3,POMZP3,SSC4D,
../firstrun/newGeneCopies/TEX38/TEX38_partitions/TEX38_group1.fasta	../firstrun/newGeneCopies/TEX38/TEX38_partitions/TEX38_group1_TEX38OOOATPAF1OOOEFCAB14.fasta	EFCAB14-AS1,EFCAB14,TEX38,ATPAF1,NENFP1,
../firstrun/newGeneCopies/GPAT2/GPAT2_partitions/GPAT2_group1.fasta	../firstrun/newGeneCopies/GPAT2/GPAT2_partitions/GPAT2_group1_GPAT2OOOGPAT2P1OOOGPAT2P2.fasta	AC009238.6,FAHD2CP,GPAT2,FAHD2B,AC159540.3,GPAT2P2,GPAT2P1,FAHD2A,AC159540.1,RP11-734K23.9,
../firstrun/newGeneCopies/DEFB104/DEFB104_partitions/DEFB104_group1.fasta	../firstrun/newGeneCopies/DEFB104/DEFB104_partitions/DEFB104_group1_DEFB104AOOODEFB104B.fasta	DEFB104A,DEFB104B,
../firstrun/newGeneCopies/PITPNM/PITPNM_partitions/PITPNM_group3.fasta	../firstrun/newGeneCopies/PITPNM/PITPNM_partitions/PITPNM_group3_PITPNM2OOOABCB9OOOARL6IP4.fasta	PITPNM2,MIR4304,ARL6IP4,ABCB9,RP11-197N18.2,
../firstrun/newGeneCopies/PITPNM/PITPNM_partitions/PITPNM_group1.fasta	../firstrun/newGeneCopies/PITPNM/PITPNM_partitions/PITPNM_group1_PITPNM1OOOAIPOOOCDK2AP2.fasta	AIP,MIR6752,PITPNM1,CDK2AP2,
../firstrun/newGeneCopies/PITPNM/PITPNM_partitions/PITPNM_group6.fasta	../firstrun/newGeneCopies/PITPNM/PITPNM_partitions/PITPNM_group6_PITPNM2OOOMPHOSPH9OOORP11-546D6v3.fasta	PITPNM2,RP11-546D6.3,MPHOSPH9,
../firstrun/newGeneCopies/PITPNM/PITPNM_partitions/PITPNM_group4.fasta	../firstrun/newGeneCopies/PITPNM/PITPNM_partitions/PITPNM_group4_PITPNM2.fasta	PITPNM2,
../firstrun/newGeneCopies/PITPNM/PITPNM_partitions/PITPNM_group5.fasta	../firstrun/newGeneCopies/PITPNM/PITPNM_partitions/PITPNM_group5_PITPNM2OOOPITPNM2-AS1OOORP11-197N18v8.fasta	PITPNM2,RP11-197N18.8,PITPNM2-AS1,
../firstrun/newGeneCopies/USP8/USP8_partitions/USP8_group4.fasta	../firstrun/newGeneCopies/USP8/USP8_partitions/USP8_group4_USP8OOOAC012170v2OOOAC012170v3.fasta	RNA5SP395,AC012170.3,RP11-562A8.1,USP8,AC012170.2,USP50,
../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group1.fasta	../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group1_CSMD1.fasta	CSMD1,
../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group3.fasta	../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group3_CSMD1OOORP11-279L11v1OOORP11-279L11v2.fasta	CSMD1,RP11-279L11.2,RP11-279L11.1,
../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group2.fasta	../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group2_CSMD1.fasta	CSMD1,
../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group8.fasta	../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group8_CSMD1.fasta	CSMD1,
../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group7.fasta	../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group7_CSMD1.fasta	CSMD1,
../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group12.fasta	../firstrun/newGeneCopies/CSMD1/CSMD1_partitions/CSMD1_group12_CSMD1.fasta	CSMD1,
../firstrun/newGeneCopies/KIAA0895/KIAA0895_partitions/KIAA0895_group2.fasta	../firstrun/newGeneCopies/KIAA0895/KIAA0895_partitions/KIAA0895_group2_KIAA0895OOOANLN.fasta	ANLN,KIAA0895,
../firstrun/newGeneCopies/KIAA0895/KIAA0895_partitions/KIAA0895_group1.fasta	../firstrun/newGeneCopies/KIAA0895/KIAA0895_partitions/KIAA0895_group1_KIAA0895OOOY_RNA.fasta	Y_RNA,KIAA0895,
../firstrun/newGeneCopies/EEF2K/EEF2K_partitions/EEF2K_group16.fasta	../firstrun/newGeneCopies/EEF2K/EEF2K_partitions/EEF2K_group16_EEF2KOOORP11-141O15v1.fasta	RP11-141O15.1,EEF2K,
../firstrun/newGeneCopies/TMEM252/TMEM252_partitions/TMEM252_group1.fasta	../firstrun/newGeneCopies/TMEM252/TMEM252_partitions/TMEM252_group1_TMEM252OOOTMEM252-DTOOOLINC01506.fasta	LINC01506,RP11-274B18.3,TMEM252-DT,TMEM252,
../firstrun/newGeneCopies/CKMT/CKMT_partitions/CKMT_group3.fasta	../firstrun/newGeneCopies/CKMT/CKMT_partitions/CKMT_group3_CKMT1AOOOCKMT1BOOOPPIP5K1.fasta	RNU6-353P,STRC,STRCP1,CKMT1A,PPIP5K1,RNU6-554P,CKMT1B,
../firstrun/newGeneCopies/DUSP2/DUSP2_partitions/DUSP2_group1.fasta	../firstrun/newGeneCopies/DUSP2/DUSP2_partitions/DUSP2_group1_DUSP2OOOAC012307v2OOOASTL.fasta	AC012307.2,ASTL,DUSP2,
../firstrun/newGeneCopies/TBL2/TBL2_partitions/TBL2_group1.fasta	../firstrun/newGeneCopies/TBL2/TBL2_partitions/TBL2_group1_TBL2.fasta	TBL2,
../firstrun/newGeneCopies/IL9R/IL9R_partitions/IL9R_group4.fasta	../firstrun/newGeneCopies/IL9R/IL9R_partitions/IL9R_group4_IL9ROOOIL9RP1OOOIL9RP2.fasta	IL9R,AJ271736.10,IL9RP3,WASIR2,IL9RP4,WASIR1,IL9RP1,Z84812.4,IL9RP2,
../firstrun/newGeneCopies/CNTNAP3/CNTNAP3_partitions/CNTNAP3_group1.fasta	../firstrun/newGeneCopies/CNTNAP3/CNTNAP3_partitions/CNTNAP3_group1_CNTNAP3OOOCNTNAP3BOOOCNTNAP3C.fasta	RN7SL343P,RN7SL422P,CNTNAP3P2,CNTNAP3C,RBM17P2,RP11-101E5.7,RP11-292B8.2,CNTNAP3B,RP11-24B13.2,RBM17P1,RN7SL462P,RN7SL640P,RBM17P3,CNTNAP3,RP11-290L7.3,RP11-290L7.5,
../firstrun/newGeneCopies/EFNA2/EFNA2_partitions/EFNA2_group1.fasta	../firstrun/newGeneCopies/EFNA2/EFNA2_partitions/EFNA2_group1_EFNA2.fasta	EFNA2,
../firstrun/newGeneCopies/UBXN11/UBXN11_partitions/UBXN11_group1.fasta	../firstrun/newGeneCopies/UBXN11/UBXN11_partitions/UBXN11_group1_UBXN11OOOCD52OOOCEP85.fasta	CEP85,CD52,UBXN11,SH3BGRL3,
../firstrun/newGeneCopies/GSTT4/GSTT4_partitions/GSTT4_group1.fasta	../firstrun/newGeneCopies/GSTT4/GSTT4_partitions/GSTT4_group1_GSTT4OOOAP000350v7OOOAP000350v8.fasta	KB-1125A3.14,AP000350.7,AP000350.8,CABIN1,AP000351.13,GSTT4,KB-1125A3.13,
../firstrun/newGeneCopies/PRR33/PRR33_partitions/PRR33_group7.fasta	../firstrun/newGeneCopies/PRR33/PRR33_partitions/PRR33_group7_PRR33OOOLINC01150OOOLSP1.fasta	TNNT3,PRR33,LSP1,LINC01150,
../firstrun/newGeneCopies/AURKA/AURKA_partitions/AURKA_group4.fasta	../firstrun/newGeneCopies/AURKA/AURKA_partitions/AURKA_group4_AURKAOOOCSTF1OOOFAM210B.fasta	FAM210B,AURKA,CSTF1,
../firstrun/newGeneCopies/AURKA/AURKA_partitions/AURKA_group1.fasta	../firstrun/newGeneCopies/AURKA/AURKA_partitions/AURKA_group1_AURKAIP1OOONDUFB4P8.fasta	AURKAIP1,NDUFB4P8,
../firstrun/newGeneCopies/FBXO31/FBXO31_partitions/FBXO31_group1.fasta	../firstrun/newGeneCopies/FBXO31/FBXO31_partitions/FBXO31_group1_FBXO31OOOMAP1LC3BOOORP11-178L8v3.fasta	RP11-178L8.4,FBXO31,RP11-178L8.9,RP11-178L8.8,MAP1LC3B,RP11-178L8.3,
../firstrun/newGeneCopies/PDXDC1/PDXDC1_partitions/PDXDC1_group07203.fasta	../firstrun/newGeneCopies/PDXDC1/PDXDC1_partitions/PDXDC1_group07203_PDXDC1OOOCH17-262H22v1OOOCTB-134H23v3.fasta	RP11-645C24.6,MIR1972-2,RRN3P1,RP11-677O4.6,PDXDC2P,MIR1972-1,CH17-262H22.1,RP11-680G24.4,RP11-680G24.6,PDXDC1,NPIPB4,PDXDC2P-NPIPB14P,Y_RNA,NPIPB1P,CTB-134H23.3,RP11-231C14.10,RP11-419C5.3,RRN3,RP11-677O4.5,NPIPB14P,RRN3P2,RP11-426C22.3,NPIPB13,NTAN1,
../firstrun/newGeneCopies/MBD1/MBD1_partitions/MBD1_group1.fasta	../firstrun/newGeneCopies/MBD1/MBD1_partitions/MBD1_group1_MBD1OOOCFAP53OOOCXXC1.fasta	CFAP53,MBD1,CXXC1,
../firstrun/newGeneCopies/PRY/PRY_partitions/PRY_group1.fasta	../firstrun/newGeneCopies/PRY/PRY_partitions/PRY_group1_PRYOOOPRY2OOOPRYP3.fasta	ELOCP8,TTTY1,PRYP4,PRYP3,TTTY2B,ELOCP15,TTTY2,ELOCP11,PRY,ELOCP16,PRY2,TTTY1B,
../firstrun/newGeneCopies/XXbac-BPG32J3/XXbac-BPG32J3_partitions/XXbac-BPG32J3_group1.fasta	../firstrun/newGeneCopies/XXbac-BPG32J3/XXbac-BPG32J3_partitions/XXbac-BPG32J3_group1_XXbac-BPG32J3v22OOOCSNK2BOOOENSG00000258543.fasta	ENSG00000258589,XXbac-BPG32J3.22,ENSG00000258543,CSNK2B,GPANK1,LY6G5C,Y_RNA,LY6G5B,
../firstrun/newGeneCopies/XXbac-BPG32J3/XXbac-BPG32J3_partitions/XXbac-BPG32J3_group2.fasta	../firstrun/newGeneCopies/XXbac-BPG32J3/XXbac-BPG32J3_partitions/XXbac-BPG32J3_group2_XXbac-BPG32J3v20OOOABHD16AOOOLY6G5C.fasta	MIR4646,XXbac-BPG32J3.20,LY6G6D,LY6G6E,LY6G5C,ABHD16A,LY6G6F,LY6G6F-LY6G6D,
../firstrun/newGeneCopies/GUK1/GUK1_partitions/GUK1_group1.fasta	../firstrun/newGeneCopies/GUK1/GUK1_partitions/GUK1_group1_GUK1OOOGJC2.fasta	GJC2,GUK1,
../firstrun/newGeneCopies/TRARG1/TRARG1_partitions/TRARG1_group1.fasta	../firstrun/newGeneCopies/TRARG1/TRARG1_partitions/TRARG1_group1_TRARG1OOOABR.fasta	ABR,TRARG1,
../firstrun/newGeneCopies/BIK/BIK_partitions/BIK_group1.fasta	../firstrun/newGeneCopies/BIK/BIK_partitions/BIK_group1_BIKOOOMCAT.fasta	MCAT,BIK,
../firstrun/newGeneCopies/JOSD2/JOSD2_partitions/JOSD2_group1.fasta	../firstrun/newGeneCopies/JOSD2/JOSD2_partitions/JOSD2_group1_JOSD2OOOASPDH.fasta	ASPDH,JOSD2,
../firstrun/newGeneCopies/TBC1D28/TBC1D28_partitions/TBC1D28_group2.fasta	../firstrun/newGeneCopies/TBC1D28/TBC1D28_partitions/TBC1D28_group2_TBC1D28OOOAC005324v8OOONEK4P2.fasta	TBC1D28,TBC1D26-AS1,RP11-640I15.2,AC005324.8,RP11-815I9.3,NEK4P2,TBC1D26,RP11-815I9.7,
../firstrun/newGeneCopies/GSTT2/GSTT2_partitions/GSTT2_group10.fasta	../firstrun/newGeneCopies/GSTT2/GSTT2_partitions/GSTT2_group10_GSTT2OOOGSTT2BOOOAP000351v3.fasta	CH17-476P10.1,AP000351.3,AP000351.4,GSTT2,DDT,DDTL,KB-226F1.2,GSTT2B,KB-1125A3.10,
../firstrun/newGeneCopies/PSMD13/PSMD13_partitions/PSMD13_group1.fasta	../firstrun/newGeneCopies/PSMD13/PSMD13_partitions/PSMD13_group1_PSMD13OOORP11-326C3v16OOOSIRT3.fasta	PSMD13,RP11-326C3.16,SIRT3,
../firstrun/newGeneCopies/DEFB107/DEFB107_partitions/DEFB107_group051302.fasta	../firstrun/newGeneCopies/DEFB107/DEFB107_partitions/DEFB107_group051302_DEFB107AOOODEFB107BOOOAC007326v11.fasta	RP11-572M11.4,PRODH,ERVK-28,SGCD,DEFB107A,CTB-151G24.2,AC007326.11,RP11-29H23.5,DEFB105A,RP11-420K14.1,RP11-29H23.8,DEFB107B,AC007326.13,
../firstrun/newGeneCopies/EPM2A/EPM2A_partitions/EPM2A_group2.fasta	../firstrun/newGeneCopies/EPM2A/EPM2A_partitions/EPM2A_group2_EPM2AOOORNU1-33POOORP1-28C20v1.fasta	RP1-28C20.1,RNU1-33P,EPM2A,
../firstrun/newGeneCopies/EPM2A/EPM2A_partitions/EPM2A_group5.fasta	../firstrun/newGeneCopies/EPM2A/EPM2A_partitions/EPM2A_group5_EPM2AOOORP3-466P17v1OOORP3-466P17v2.fasta	RP3-466P17.1,RP3-466P17.2,EPM2A,
../firstrun/newGeneCopies/CYP11B/CYP11B_partitions/CYP11B_group1.fasta	../firstrun/newGeneCopies/CYP11B/CYP11B_partitions/CYP11B_group1_CYP11B1OOOCYP11B2OOOGML.fasta	GML,CYP11B2,CYP11B1,
../firstrun/newGeneCopies/KIR2DP/KIR2DP_partitions/KIR2DP_group1.fasta	../firstrun/newGeneCopies/KIR2DP/KIR2DP_partitions/KIR2DP_group1_KIR2DP1OOOCTB-61M7v1OOOENSG00000275583.fasta	ENSG00000283763,KIR2DS1,ENSG00000275583,KIR3DL1,KIR3DP1,KIR3DL3,ENSG00000284169,GU182358.3,GU182338.2,ENSG00000283722,KIR2DL5B,KIR2DS2,ENSG00000284053,GU182347.12,KIR2DS4,ENSG00000283716,KIR3DL2,ENSG00000284301,ENSG00000288316,ENSG00000284555,GU182360.3,GU182339.6,KIR2DL3,KIR2DS5,ENSG00000284511,GU182351.11,GU182343.5,ENSG00000283742,GU182352.6,ENSG00000284033,ENSG00000288389,KIR3DS1,ENSG00000283784,ENSG00000284580,GU182352.4,GU182353.5,ENSG00000288650,ENSG00000284101,ENSG00000288381,GU182351.6,GU182339.12,KIR2DP1,KIR2DL4,ENSG00000284225,ENSG00000288613,GU182343.7,GU182357.5,KIR2DL5A,GU182354.5,GU182354.3,GU182355.5,CTB-61M7.1,ENSG00000283902,KIR2DL1,KIR2DL2,KIR2DS3,
../firstrun/newGeneCopies/ANKRD13/ANKRD13_partitions/ANKRD13_group1.fasta	../firstrun/newGeneCopies/ANKRD13/ANKRD13_partitions/ANKRD13_group1_ANKRD13COOOHHLA3.fasta	ANKRD13C,HHLA3,
../firstrun/newGeneCopies/ANKRD13/ANKRD13_partitions/ANKRD13_group4.fasta	../firstrun/newGeneCopies/ANKRD13/ANKRD13_partitions/ANKRD13_group4_ANKRD13DOOOGRK2OOOSSH3.fasta	SSH3,ANKRD13D,GRK2,
../firstrun/newGeneCopies/ZAP70/ZAP70_partitions/ZAP70_group1.fasta	../firstrun/newGeneCopies/ZAP70/ZAP70_partitions/ZAP70_group1_ZAP70.fasta	ZAP70,
../firstrun/newGeneCopies/BAX/BAX_partitions/BAX_group1.fasta	../firstrun/newGeneCopies/BAX/BAX_partitions/BAX_group1_BAXOOOCTD-2639E6v9OOOFTL.fasta	BAX,FTL,CTD-2639E6.9,
../firstrun/newGeneCopies/ACO2/ACO2_partitions/ACO2_group4.fasta	../firstrun/newGeneCopies/ACO2/ACO2_partitions/ACO2_group4_ACO2OOOTOB2.fasta	ACO2,TOB2,
../firstrun/newGeneCopies/ACO2/ACO2_partitions/ACO2_group5.fasta	../firstrun/newGeneCopies/ACO2/ACO2_partitions/ACO2_group5_ACO2OOOPHF5AOOOPOLR3H.fasta	ACO2,POLR3H,PHF5A,
../firstrun/newGeneCopies/TYMS/TYMS_partitions/TYMS_group3.fasta	../firstrun/newGeneCopies/TYMS/TYMS_partitions/TYMS_group3_TYMSOOOTYMSOSOOOCLUL1.fasta	ENOSF1,RP11-806L2.5,TYMS,TYMSOS,RP11-806L2.2,CLUL1,
../firstrun/newGeneCopies/EXD3/EXD3_partitions/EXD3_group1.fasta	../firstrun/newGeneCopies/EXD3/EXD3_partitions/EXD3_group1_EXD3OOONOXA1.fasta	NOXA1,EXD3,
../firstrun/newGeneCopies/PIWIL3/PIWIL3_partitions/PIWIL3_group3.fasta	../firstrun/newGeneCopies/PIWIL3/PIWIL3_partitions/PIWIL3_group3_PIWIL3OOOCRIP1P4.fasta	CRIP1P4,PIWIL3,
../firstrun/newGeneCopies/ZNF333/ZNF333_partitions/ZNF333_group1.fasta	../firstrun/newGeneCopies/ZNF333/ZNF333_partitions/ZNF333_group1_ZNF333OOOADGRE2OOOADGRE3.fasta	ADGRE2,ADGRE3,ZNF333,
../firstrun/newGeneCopies/IDI2/IDI2_partitions/IDI2_group1.fasta	../firstrun/newGeneCopies/IDI2/IDI2_partitions/IDI2_group1_IDI2OOOIDI2-AS1OOOGTPBP4.fasta	GTPBP4,IDI2-AS1,IDI2,IDI1,
../firstrun/newGeneCopies/LCN12/LCN12_partitions/LCN12_group1.fasta	../firstrun/newGeneCopies/LCN12/LCN12_partitions/LCN12_group1_LCN12OOOC8G.fasta	LCN12,C8G,
../firstrun/newGeneCopies/RNASE3/RNASE3_partitions/RNASE3_group1.fasta	../firstrun/newGeneCopies/RNASE3/RNASE3_partitions/RNASE3_group1_RNASE3OOORNASE2OOORP11-219E7v4.fasta	RP11-219E7.4,RNASE2,RP11-84C10.2,RNASE3,RP11-84C10.3,
../firstrun/newGeneCopies/ERCC2/ERCC2_partitions/ERCC2_group1.fasta	../firstrun/newGeneCopies/ERCC2/ERCC2_partitions/ERCC2_group1_ERCC2OOOKLC3.fasta	ERCC2,KLC3,
../firstrun/newGeneCopies/COX7A1/COX7A1_partitions/COX7A1_group1.fasta	../firstrun/newGeneCopies/COX7A1/COX7A1_partitions/COX7A1_group1_COX7A1OOOAD001527v7OOOCAPNS1.fasta	AD001527.7,COX7A1,CAPNS1,
../firstrun/newGeneCopies/REXO4/REXO4_partitions/REXO4_group1.fasta	../firstrun/newGeneCopies/REXO4/REXO4_partitions/REXO4_group1_REXO4OOOADAMTS13OOOSTKLD1.fasta	REXO4,ADAMTS13,STKLD1,
../firstrun/newGeneCopies/CDK2AP/CDK2AP_partitions/CDK2AP_group20.fasta	../firstrun/newGeneCopies/CDK2AP/CDK2AP_partitions/CDK2AP_group20_CDK2AP2OOOPITPNM1.fasta	PITPNM1,CDK2AP2,
../firstrun/newGeneCopies/CDK2AP/CDK2AP_partitions/CDK2AP_group23.fasta	../firstrun/newGeneCopies/CDK2AP/CDK2AP_partitions/CDK2AP_group23_CDK2AP1OOOAC068768v1OOOC12orf65.fasta	RP11-282O18.7,C12orf65,CDK2AP1,AC068768.1,
../firstrun/newGeneCopies/GCSH/GCSH_partitions/GCSH_group8.fasta	../firstrun/newGeneCopies/GCSH/GCSH_partitions/GCSH_group8_GCSHOOORP11-303E16v10OOORP11-303E16v8.fasta	RP11-303E16.10,GCSH,RP11-303E16.8,
../firstrun/newGeneCopies/GABRB3/GABRB3_partitions/GABRB3_group7.fasta	../firstrun/newGeneCopies/GABRB3/GABRB3_partitions/GABRB3_group7_GABRB3OOOGABRA5.fasta	GABRA5,GABRB3,
../firstrun/newGeneCopies/GABRB3/GABRB3_partitions/GABRB3_group6.fasta	../firstrun/newGeneCopies/GABRB3/GABRB3_partitions/GABRB3_group6_GABRB3.fasta	GABRB3,
../firstrun/newGeneCopies/GABRB3/GABRB3_partitions/GABRB3_group5.fasta	../firstrun/newGeneCopies/GABRB3/GABRB3_partitions/GABRB3_group5_GABRB3.fasta	GABRB3,
../firstrun/newGeneCopies/GABRB3/GABRB3_partitions/GABRB3_group3.fasta	../firstrun/newGeneCopies/GABRB3/GABRB3_partitions/GABRB3_group3_GABRB3OOOAC011196v3.fasta	AC011196.3,GABRB3,
../firstrun/newGeneCopies/GABRB3/GABRB3_partitions/GABRB3_group2.fasta	../firstrun/newGeneCopies/GABRB3/GABRB3_partitions/GABRB3_group2_GABRB3OOORP11-345N11v1.fasta	RP11-345N11.1,GABRB3,
../firstrun/newGeneCopies/OCM2/OCM2_partitions/OCM2_group1.fasta	../firstrun/newGeneCopies/OCM2/OCM2_partitions/OCM2_group1_OCM2OOOOCM.fasta	OCM2,OCM,
../firstrun/newGeneCopies/TMEM60/TMEM60_partitions/TMEM60_group1.fasta	../firstrun/newGeneCopies/TMEM60/TMEM60_partitions/TMEM60_group1_TMEM60OOOPHTF2.fasta	TMEM60,PHTF2,
../firstrun/newGeneCopies/SNAPIN/SNAPIN_partitions/SNAPIN_group1.fasta	../firstrun/newGeneCopies/SNAPIN/SNAPIN_partitions/SNAPIN_group1_SNAPINOOOILF2.fasta	SNAPIN,ILF2,
../firstrun/newGeneCopies/CTAGE9/CTAGE9_partitions/CTAGE9_group2.fasta	../firstrun/newGeneCopies/CTAGE9/CTAGE9_partitions/CTAGE9_group2_CTAGE9OOOAC073264v6OOOARHGEF34P.fasta	RNU6-162P,CTAGE4,CTAGE8,CTAGE9,RNU6-267P,ENSG00000285408,AC073264.6,CTAGE15,OR2A7,ARHGEF35,ENPP3,ARHGEF34P,ENSG00000284912,ARHGEF35-AS1,RP4-798C17.7,CTAGE6,OR2AO1P,
../firstrun/newGeneCopies/YPEL1/YPEL1_partitions/YPEL1_group1.fasta	../firstrun/newGeneCopies/YPEL1/YPEL1_partitions/YPEL1_group1_YPEL1OOOBCRP5OOOKB-1440D3v20.fasta	TMEM191A,PPIL2,YPEL1,KB-1440D3.20,BCRP5,RN7SL280P,KB-1440D3.21,POM121L4P,
../firstrun/newGeneCopies/TEX50/TEX50_partitions/TEX50_group1.fasta	../firstrun/newGeneCopies/TEX50/TEX50_partitions/TEX50_group1_TEX50OOOANKRD45OOORP3-436N22v5.fasta	RP3-436N22.5,ANKRD45,TEX50,
../firstrun/newGeneCopies/ECHS1/ECHS1_partitions/ECHS1_group1.fasta	../firstrun/newGeneCopies/ECHS1/ECHS1_partitions/ECHS1_group1_ECHS1OOOCALYOOOMIR3944.fasta	RP11-122K13.15,CALY,TUBGCP2,MIR3944,ECHS1,ZNF511-PRAP1,
../firstrun/newGeneCopies/GNPTG/GNPTG_partitions/GNPTG_group1.fasta	../firstrun/newGeneCopies/GNPTG/GNPTG_partitions/GNPTG_group1_GNPTGOOOBAIAP3OOOLA16c-316G12v2.fasta	GNPTG,LA16c-316G12.2,BAIAP3,UNKL,TSR3,
../firstrun/newGeneCopies/RP11-350O14.18/RP11-350O14.18_partitions/RP11-350O14.18_group1.fasta	../firstrun/newGeneCopies/RP11-350O14.18/RP11-350O14.18_partitions/RP11-350O14.18_group1_RP11-350O14v18OOOANAPC2OOOGRIN1.fasta	GRIN1,MIR3621,TMEM210,RP11-350O14.18,ANAPC2,LRRC26,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group27.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group27_OR4X1.fasta	OR4X1,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group69.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group69_OR4K11POOOOR4K15OOOOR4K16P.fasta	OR4K11P,OR4K8P,OR4K15,OR4K16P,LINC01674,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group94.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group94_OR4F13POOOOR4F14POOOOR4F15.fasta	OR4F15,OR4F14P,OR4F13P,OR4F6,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group31.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group31_OR4C48POOOOR4C5.fasta	OR4C5,OR4C48P,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group11.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group11_OR4F17OOOOR4F4OOOOR4F5.fasta	OR4F5,OR4G3P,OR4F17,OR4G6P,OR4F4,OR4G4P,OR4G1P,OR4G11P,OR4G2P,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group25.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group25_OR4B1OOOOR4B2POOOOR4X2.fasta	OR4B2P,OR4X2,OR4B1,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group29.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group29_OR4C3OOOOR4C49P.fasta	OR4C49P,OR4C3,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group67.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group67_OR4H12POOOOR4H6BPOOOOR4H6P.fasta	OR11K2P,OR4H6P,OR4N3P,OR4K7P,RP11-536C10.5,RP11-69H14.6,OR4H12P,OR4H6BP,OR11H2,ENSG00000276872,OR4M2B,OR4M1,ENSG00000288469,OR4N1P,OR4N3BP,RP11-536C10.4,OR4Q1P,LINC02203,OR4N2,LINC01674,OR11K1P,OR4N4,OR4Q3,OR1Q1BP,RP11-146E13.4,ENSG00000275249,OR4N4C,RP11-69H14.10,ENSG00000274792,ENSG00000288193,OR4K12P,OR11K1BP,RP11-983G14.2,OR4M2,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group33.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group33_OR4C13OOOOR4C7POOOOR4C9P.fasta	OR4C7P,OR4C13,OR4C9P,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group50.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group50_OR4A11POOOOR4A12POOOOR4A16.fasta	OR4A11P,OR4A12P,OR4A16,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group28.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group28_OR4S1.fasta	OR4S1,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group32.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group32_OR4C10POOOOR4C12OOOOR4C2P.fasta	OR4C10P,OR4C50P,OR4C12,OR4C46,OR4C2P,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group70.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group70_OR4K1OOOOR4K4POOOOR4K5.fasta	OR4K1,OR4K4P,CTD-2335L22.6,OR4K5,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group51.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group51_OR4A15.fasta	OR4A15,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group86.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group86_OR4K13OOOOR4K14OOOOR4Q2.fasta	OR4K13,OR4U1P,OR4Q2,OR4K14,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group35.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group35_OR4A1POOOOR4A40POOOOR4A42P.fasta	OR4A7P,OR4A8,OR4A1P,RP11-163O19.8,OR4A43P,OR4A42P,OR4A5,OR4A6P,OR4A40P,OR4A44P,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group57.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group57_OR4C15.fasta	OR4C15,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group87.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group87_OR4L1.fasta	OR4L1,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group34.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group34_OR4A18POOOOR4A19POOOOR4A2P.fasta	OR4A46P,OR4R3P,OR4A4P,OR4A49P,OR4A19P,OR4A2P,OR4A48P,OR4A18P,OR4A3P,OR4A47,OR4R1P,OR4R2P,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group58.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group58_OR4C16.fasta	OR4C16,
../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group89.fasta	../firstrun/newGeneCopies/OR4/OR4_partitions/OR4_group89_OR4K17OOOOR4N5OOOPSMB7P1.fasta	PSMB7P1,OR4K17,OR4N5,
../firstrun/newGeneCopies/CGB/CGB_partitions/CGB_group1.fasta	../firstrun/newGeneCopies/CGB/CGB_partitions/CGB_group1_CGB1OOOCGB2OOOCGB3.fasta	LHB,CGB7,CGB2,CGB3,CTB-60B18.6,CTB-60B18.17,CTB-60B18.10,CTB-60B18.15,CGB5,CTB-60B18.12,CGB1,NTF4,CTB-60B18.23,NTF6A,NTF6G,RUVBL2,NTF6B,CGB8,CTB-60B18.22,
../firstrun/newGeneCopies/BRMS1/BRMS1_partitions/BRMS1_group1.fasta	../firstrun/newGeneCopies/BRMS1/BRMS1_partitions/BRMS1_group1_BRMS1OOOB4GAT1OOORIN1.fasta	RP11-867G23.12,B4GAT1,RP11-867G23.8,BRMS1,RIN1,
../firstrun/newGeneCopies/SNRPN/SNRPN_partitions/SNRPN_group1.fasta	../firstrun/newGeneCopies/SNRPN/SNRPN_partitions/SNRPN_group1_SNRPNOOOAC090602v2OOOPWRN1.fasta	PWRN1,SNRPN,RP11-125E1.2,RPL5P1,AC090602.2,
../firstrun/newGeneCopies/SNRPN/SNRPN_partitions/SNRPN_group4.fasta	../firstrun/newGeneCopies/SNRPN/SNRPN_partitions/SNRPN_group4_SNRPNOOORP11-701H24v9OOOSNHG14.fasta	SNURF,SNRPN,SNHG14,RP11-701H24.9,
../firstrun/newGeneCopies/CDR2/CDR2_partitions/CDR2_group1.fasta	../firstrun/newGeneCopies/CDR2/CDR2_partitions/CDR2_group1_CDR2OOOCDR2-DTOOOCA5A.fasta	SMG1,CA5A,MFSD13B,RP11-21M24.3,SMG1P3,RP11-231C14.10,RP11-345J4.11,SMG1P5,CDR2-DT,RP11-368N21.5,CDR2,SMG1P2,RRN3P2,CTB-134H23.3,RRN3,CTD-2288F12.1,MIR3680-2,RP11-645C24.5,RP11-347C12.12,RP11-426C22.3,RRN3P1,RP11-21M24.6,RRN3P3,SMG1P1,PDXDC1,
../firstrun/newGeneCopies/HSPA6/HSPA6_partitions/HSPA6_group1.fasta	../firstrun/newGeneCopies/HSPA6/HSPA6_partitions/HSPA6_group1_HSPA6OOOFCGR2AOOOFCGR2C.fasta	RP11-25K21.6,HSPA6,FCGR2A,HSPA7,FCGR2C,
../firstrun/newGeneCopies/PCMT1/PCMT1_partitions/PCMT1_group1.fasta	../firstrun/newGeneCopies/PCMT1/PCMT1_partitions/PCMT1_group1_PCMT1OOONUP43.fasta	NUP43,PCMT1,
../firstrun/newGeneCopies/PCMT1/PCMT1_partitions/PCMT1_group2.fasta	../firstrun/newGeneCopies/PCMT1/PCMT1_partitions/PCMT1_group2_PCMT1OOOBTBD10P2OOORP11-350J20v17.fasta	BTBD10P2,PCMT1,RP11-350J20.5,RP11-350J20.17,
../firstrun/newGeneCopies/RNF112/RNF112_partitions/RNF112_group1.fasta	../firstrun/newGeneCopies/RNF112/RNF112_partitions/RNF112_group1_RNF112OOOAC004448v5OOOCTB-187M2v2.fasta	AC004448.5,CTB-187M2.2,LINC02094,ENSG10010139285.1,RNF112,
../firstrun/newGeneCopies/UNCX/UNCX_partitions/UNCX_group1.fasta	../firstrun/newGeneCopies/UNCX/UNCX_partitions/UNCX_group1_UNCX.fasta	UNCX,
../firstrun/newGeneCopies/HSD3B/HSD3B_partitions/HSD3B_group4.fasta	../firstrun/newGeneCopies/HSD3B/HSD3B_partitions/HSD3B_group4_HSD3B1.fasta	HSD3B1,
../firstrun/newGeneCopies/HSD3B/HSD3B_partitions/HSD3B_group1.fasta	../firstrun/newGeneCopies/HSD3B/HSD3B_partitions/HSD3B_group1_HSD3B2.fasta	HSD3B2,
../firstrun/newGeneCopies/CCKBR/CCKBR_partitions/CCKBR_group1.fasta	../firstrun/newGeneCopies/CCKBR/CCKBR_partitions/CCKBR_group1_CCKBR.fasta	CCKBR,
../firstrun/newGeneCopies/UHRF1BP1/UHRF1BP1_partitions/UHRF1BP1_group1.fasta	../firstrun/newGeneCopies/UHRF1BP1/UHRF1BP1_partitions/UHRF1BP1_group1_UHRF1BP1.fasta	UHRF1BP1,
../firstrun/newGeneCopies/UHRF1BP1/UHRF1BP1_partitions/UHRF1BP1_group2.fasta	../firstrun/newGeneCopies/UHRF1BP1/UHRF1BP1_partitions/UHRF1BP1_group2_UHRF1BP1OOORNY3P15OOOTAF11.fasta	RNY3P15,UHRF1BP1,Y_RNA,TAF11,
../firstrun/newGeneCopies/ZNF804/ZNF804_partitions/ZNF804_group1.fasta	../firstrun/newGeneCopies/ZNF804/ZNF804_partitions/ZNF804_group1_ZNF804AOOORP11-363K21v1OOORPL23AP33.fasta	RPL23AP33,RP11-363K21.1,ZNF804A,
../firstrun/newGeneCopies/MEIS3/MEIS3_partitions/MEIS3_group5.fasta	../firstrun/newGeneCopies/MEIS3/MEIS3_partitions/MEIS3_group5_MEIS3.fasta	MEIS3,
../firstrun/newGeneCopies/CBS/CBS_partitions/CBS_group1.fasta	../firstrun/newGeneCopies/CBS/CBS_partitions/CBS_group1_CBSOOOCBSL.fasta	CBSL,CBS,
../firstrun/newGeneCopies/ZNF705/ZNF705_partitions/ZNF705_group1.fasta	../firstrun/newGeneCopies/ZNF705/ZNF705_partitions/ZNF705_group1_ZNF705AOOOZNF705BOOOZNF705CP.fasta	FAM66B,DEFB108D,ENSG00000284958,FAM66D,RP11-1396O13.23,ZNF705E,ZNF705G,FAM66A,DEFB108C,FAM66C,ZNF705D,ENSG00000284907,ZNF705A,RP11-1396O13.13,DEFB108F,ALG1L9P,FAM66E,ZNF705B,ZNF705CP,DEFB108E,DEFB108A,RP11-266K4.16,DEFB108B,
../firstrun/newGeneCopies/HMMR/HMMR_partitions/HMMR_group1.fasta	../firstrun/newGeneCopies/HMMR/HMMR_partitions/HMMR_group1_HMMROOOHMMR-AS1OOONUDCD2.fasta	NUDCD2,HMMR,HMMR-AS1,
../firstrun/newGeneCopies/SORT1/SORT1_partitions/SORT1_group2.fasta	../firstrun/newGeneCopies/SORT1/SORT1_partitions/SORT1_group2_SORT1OOOPSMA5.fasta	SORT1,PSMA5,
../firstrun/newGeneCopies/SORT1/SORT1_partitions/SORT1_group1.fasta	../firstrun/newGeneCopies/SORT1/SORT1_partitions/SORT1_group1_SORT1OOOMYBPHL.fasta	SORT1,MYBPHL,
../firstrun/newGeneCopies/SURF1/SURF1_partitions/SURF1_group1.fasta	../firstrun/newGeneCopies/SURF1/SURF1_partitions/SURF1_group1_SURF1OOOENSG00000283984OOOMED22.fasta	SURF1,MED22,SNORD36C,SNORD36A,SNORD36B,ENSG00000283984,SNORD24,SURF2,SURF4,RPL7A,
../firstrun/newGeneCopies/GSTM4/GSTM4_partitions/GSTM4_group1.fasta	../firstrun/newGeneCopies/GSTM4/GSTM4_partitions/GSTM4_group1_GSTM4OOOAC000032v2OOOGSTM1.fasta	GSTM5,AC000032.2,GSTM4,GSTM1,GSTM2,
../firstrun/newGeneCopies/RP11-807H22.10/RP11-807H22.10_partitions/RP11-807H22.10_group1.fasta	../firstrun/newGeneCopies/RP11-807H22.10/RP11-807H22.10_partitions/RP11-807H22.10_group1_RP11-807H22v10OOOANAPC15OOOLAMTOR1.fasta	NUMA1,LAMTOR1,ANAPC15,RP11-807H22.10,LRTOMT,RP11-807H22.9,
../firstrun/newGeneCopies/SARDH/SARDH_partitions/SARDH_group1.fasta	../firstrun/newGeneCopies/SARDH/SARDH_partitions/SARDH_group1_SARDH.fasta	SARDH,
../firstrun/newGeneCopies/TUBAL3/TUBAL3_partitions/TUBAL3_group1.fasta	../firstrun/newGeneCopies/TUBAL3/TUBAL3_partitions/TUBAL3_group1_TUBAL3.fasta	TUBAL3,
../firstrun/newGeneCopies/TULP3/TULP3_partitions/TULP3_group1.fasta	../firstrun/newGeneCopies/TULP3/TULP3_partitions/TULP3_group1_TULP3OOOFOXM1OOORHNO1.fasta	TULP3,FOXM1,RP11-372B4.3,RHNO1,
../firstrun/newGeneCopies/FCSK/FCSK_partitions/FCSK_group1.fasta	../firstrun/newGeneCopies/FCSK/FCSK_partitions/FCSK_group1_FCSKOOOCOG4.fasta	COG4,FCSK,
../firstrun/newGeneCopies/MTHFSD/MTHFSD_partitions/MTHFSD_group1.fasta	../firstrun/newGeneCopies/MTHFSD/MTHFSD_partitions/MTHFSD_group1_MTHFSDOOOFLJ30679.fasta	FLJ30679,MTHFSD,
../firstrun/newGeneCopies/NUPR2/NUPR2_partitions/NUPR2_group1.fasta	../firstrun/newGeneCopies/NUPR2/NUPR2_partitions/NUPR2_group1_NUPR2.fasta	NUPR2,
../firstrun/newGeneCopies/POFUT1/POFUT1_partitions/POFUT1_group1.fasta	../firstrun/newGeneCopies/POFUT1/POFUT1_partitions/POFUT1_group1_POFUT1OOOMIR1825OOOPLAGL2.fasta	PLAGL2,POFUT1,MIR1825,
../firstrun/newGeneCopies/ODAPH/ODAPH_partitions/ODAPH_group1.fasta	../firstrun/newGeneCopies/ODAPH/ODAPH_partitions/ODAPH_group1_ODAPH.fasta	ODAPH,
../firstrun/newGeneCopies/PRRC2A/PRRC2A_partitions/PRRC2A_group1.fasta	../firstrun/newGeneCopies/PRRC2A/PRRC2A_partitions/PRRC2A_group1_PRRC2AOOOBAG6OOOMIR6832.fasta	PRRC2A,BAG6,MIR6832,SNORA38,
../firstrun/newGeneCopies/MSN/MSN_partitions/MSN_group6.fasta	../firstrun/newGeneCopies/MSN/MSN_partitions/MSN_group6_MSN.fasta	MSN,
../firstrun/newGeneCopies/MSN/MSN_partitions/MSN_group2.fasta	../firstrun/newGeneCopies/MSN/MSN_partitions/MSN_group2_MSNOOOMSNP1.fasta	MSNP1,MSN,
../firstrun/newGeneCopies/ZNF688/ZNF688_partitions/ZNF688_group1.fasta	../firstrun/newGeneCopies/ZNF688/ZNF688_partitions/ZNF688_group1_ZNF688OOOAC002310v7OOOZNF785.fasta	AC002310.7,ZNF785,ZNF688,
../firstrun/newGeneCopies/TERT/TERT_partitions/TERT_group1.fasta	../firstrun/newGeneCopies/TERT/TERT_partitions/TERT_group1_TERTOOOCTD-3080P12v4.fasta	CTD-3080P12.4,TERT,
../firstrun/newGeneCopies/PHPT1/PHPT1_partitions/PHPT1_group1.fasta	../firstrun/newGeneCopies/PHPT1/PHPT1_partitions/PHPT1_group1_PHPT1OOOAJM1OOOMAMDC4.fasta	MAMDC4,AJM1,PHPT1,
../firstrun/newGeneCopies/AP000471.4/AP000471.4_partitions/AP000471.4_group1.fasta	../firstrun/newGeneCopies/AP000471.4/AP000471.4_partitions/AP000471.4_group1_AP000471v4OOOC21orf58OOOPCNT.fasta	AP000471.4,PCNT,C21orf58,
../firstrun/newGeneCopies/SCG5/SCG5_partitions/SCG5_group1.fasta	../firstrun/newGeneCopies/SCG5/SCG5_partitions/SCG5_group1_SCG5OOOSCG5-AS1OOOARHGAP11A.fasta	SCG5,ARHGAP11A,RP11-1000B6.9,SCG5-AS1,
../firstrun/newGeneCopies/EDF1/EDF1_partitions/EDF1_group1.fasta	../firstrun/newGeneCopies/EDF1/EDF1_partitions/EDF1_group1_EDF1OOOMAMDC4.fasta	EDF1,MAMDC4,
../firstrun/newGeneCopies/SEMG1/SEMG1_partitions/SEMG1_group1.fasta	../firstrun/newGeneCopies/SEMG1/SEMG1_partitions/SEMG1_group1_SEMG1.fasta	SEMG1,
../firstrun/newGeneCopies/LYRM9/LYRM9_partitions/LYRM9_group1.fasta	../firstrun/newGeneCopies/LYRM9/LYRM9_partitions/LYRM9_group1_LYRM9OOORP1-66C13v4OOORP11-138P22v1.fasta	RP11-138P22.1,LYRM9,RP1-66C13.4,
../firstrun/newGeneCopies/SPANXD/SPANXD_partitions/SPANXD_group2.fasta	../firstrun/newGeneCopies/SPANXD/SPANXD_partitions/SPANXD_group2_SPANXDOOORP11-298A8v2OOOSPANXA1.fasta	SPANXA1,SPANXD,SPANXB1,RP11-298A8.2,SPANXA2-OT1,SPANXA2,SPANXC,
../firstrun/newGeneCopies/SSX2/SSX2_partitions/SSX2_group3.fasta	../firstrun/newGeneCopies/SSX2/SSX2_partitions/SSX2_group3_SSX2OOOSSX2BOOOAF196972v10.fasta	RP11-552E4.2,AF196972.3,SSX7,RP11-552E4.3,RP11-344N17.8,SSX9P,AF196972.10,SSX4B,S100A11P10,RP11-552J9.6,S100A11P8,SSXP1,SSXP5,SSXP4,RP11-552J9.12,RP13-77O11.8,S100A11P6,SSXP3,S100A11P7,SSX1,RNU6-707P,SSX2B,RP11-344N17.11,SSX5,SSXP9,RP11-344N17.6,SSX2,RNA5SP503,SSX4,RP11-344N17.12,SSX3,RP11-552J9.9,S100A11P9,RP11-38O23.4,SSX6P,SSX8P,S100A11P5,RP11-344N17.3,AF196972.4,RP11-344N17.9,
../firstrun/newGeneCopies/TJP1/TJP1_partitions/TJP1_group9.fasta	../firstrun/newGeneCopies/TJP1/TJP1_partitions/TJP1_group9_TJP1OOOENSG00000272101OOOHMGN2P5.fasta	ENSG00000272101,TJP1,RP11-680F8.4,HMGN2P5,RP11-680F8.3,
../firstrun/newGeneCopies/ZNF724/ZNF724_partitions/ZNF724_group3.fasta	../firstrun/newGeneCopies/ZNF724/ZNF724_partitions/ZNF724_group3_ZNF724OOOBNIP3P38OOOIPO5P1.fasta	ZNF724,RP11-15H20.8,BNIP3P38,IPO5P1,RP11-15H20.7,
../firstrun/newGeneCopies/CBX/CBX_partitions/CBX_group18.fasta	../firstrun/newGeneCopies/CBX/CBX_partitions/CBX_group18_CBX2OOOCBX8OOORP11-353N14v1.fasta	RP11-353N14.1,CBX8,CBX2,
../firstrun/newGeneCopies/CBX/CBX_partitions/CBX_group19.fasta	../firstrun/newGeneCopies/CBX/CBX_partitions/CBX_group19_CBX4OOOLINC01977.fasta	CBX4,LINC01977,
../firstrun/newGeneCopies/COX5/COX5_partitions/COX5_group2.fasta	../firstrun/newGeneCopies/COX5/COX5_partitions/COX5_group2_COX5B.fasta	COX5B,
../firstrun/newGeneCopies/COX5/COX5_partitions/COX5_group10.fasta	../firstrun/newGeneCopies/COX5/COX5_partitions/COX5_group10_COX5A.fasta	COX5A,
../firstrun/newGeneCopies/NCR3/NCR3_partitions/NCR3_group1.fasta	../firstrun/newGeneCopies/NCR3/NCR3_partitions/NCR3_group1_NCR3OOOLST1.fasta	LST1,NCR3,
../firstrun/newGeneCopies/CD247/CD247_partitions/CD247_group1.fasta	../firstrun/newGeneCopies/CD247/CD247_partitions/CD247_group1_CD247OOORP11-104L21v2OOORP11-104L21v3.fasta	CD247,RP11-104L21.4,RP11-104L21.2,RP11-104L21.3,
../firstrun/newGeneCopies/CD247/CD247_partitions/CD247_group2.fasta	../firstrun/newGeneCopies/CD247/CD247_partitions/CD247_group2_CD247OOOAKR1D1P1.fasta	CD247,AKR1D1P1,
../firstrun/newGeneCopies/GAA/GAA_partitions/GAA_group1.fasta	../firstrun/newGeneCopies/GAA/GAA_partitions/GAA_group1_GAAOOOCCDC40OOOMIR1268B.fasta	CCDC40,GAA,MIR1268B,
../firstrun/newGeneCopies/DEFB132/DEFB132_partitions/DEFB132_group1.fasta	../firstrun/newGeneCopies/DEFB132/DEFB132_partitions/DEFB132_group1_DEFB132.fasta	DEFB132,
../firstrun/newGeneCopies/MT4/MT4_partitions/MT4_group1.fasta	../firstrun/newGeneCopies/MT4/MT4_partitions/MT4_group1_MT4OOOBBS2.fasta	BBS2,MT4,
../firstrun/newGeneCopies/CYP1A/CYP1A_partitions/CYP1A_group1.fasta	../firstrun/newGeneCopies/CYP1A/CYP1A_partitions/CYP1A_group1_CYP1A1.fasta	CYP1A1,
../firstrun/newGeneCopies/CYP1A/CYP1A_partitions/CYP1A_group2.fasta	../firstrun/newGeneCopies/CYP1A/CYP1A_partitions/CYP1A_group2_CYP1A2.fasta	CYP1A2,
../firstrun/newGeneCopies/DGCR6/DGCR6_partitions/DGCR6_group3.fasta	../firstrun/newGeneCopies/DGCR6/DGCR6_partitions/DGCR6_group3_DGCR6OOODGCR6LOOOAC007326v13.fasta	XXbac-B444P24.13,ENSG00000278817,XXbac-B444P24.14,DGCR6,ENSG00000277196,XXbac-B444P24.10,AC007326.13,DGCR6L,PRODH,
../firstrun/newGeneCopies/NFKBIL/NFKBIL_partitions/NFKBIL_group1.fasta	../firstrun/newGeneCopies/NFKBIL/NFKBIL_partitions/NFKBIL_group1_NFKBIL1OOOATP6V1G2OOOATP6V1G2-DDX39B.fasta	DDX39B,ATP6V1G2-DDX39B,DASS-161H22.6,ATP6V1G2,NFKBIL1,
../firstrun/newGeneCopies/TSPAN11/TSPAN11_partitions/TSPAN11_group1.fasta	../firstrun/newGeneCopies/TSPAN11/TSPAN11_partitions/TSPAN11_group1_TSPAN11OOORP11-551L14v4.fasta	TSPAN11,RP11-551L14.4,
../firstrun/newGeneCopies/LINC02203/LINC02203_partitions/LINC02203_group1.fasta	../firstrun/newGeneCopies/LINC02203/LINC02203_partitions/LINC02203_group1_LINC02203OOOENSG00000274792OOOENSG00000275249.fasta	RP11-69H14.6,ENSG00000274792,OR4N1P,RP11-983G14.2,LINC01193,OR11H1,OR4M1,OR4M2B,OR4M2,RP11-69H14.10,OR11H12,OR1Q1BP,OR11H3P,OR4Q1P,OR4N2,OR11H2,ENSG00000288469,OR11H13P,OR4N4,OR4H6BP,OR4N4C,RP11-146E13.4,OR4Q3,ENSG00000288193,RP11-536C10.4,ENSG00000275249,RP11-294C11.7,RP11-11H9.2,OR4H6P,OR11K2P,OR11K1P,OR11K1BP,LINC02203,OR4H12P,
../firstrun/newGeneCopies/YDJC/YDJC_partitions/YDJC_group1.fasta	../firstrun/newGeneCopies/YDJC/YDJC_partitions/YDJC_group1_YDJCOOOCCDC116OOOUBE2L3.fasta	YDJC,CCDC116,UBE2L3,
../firstrun/newGeneCopies/CABP/CABP_partitions/CABP_group2.fasta	../firstrun/newGeneCopies/CABP/CABP_partitions/CABP_group2_CABP2.fasta	CABP2,
../firstrun/newGeneCopies/CABP/CABP_partitions/CABP_group1.fasta	../firstrun/newGeneCopies/CABP/CABP_partitions/CABP_group1_CABP4OOOGPR152OOOTMEM134.fasta	TMEM134,CABP4,GPR152,
../firstrun/newGeneCopies/CABP/CABP_partitions/CABP_group4.fasta	../firstrun/newGeneCopies/CABP/CABP_partitions/CABP_group4_CABP5.fasta	CABP5,
../firstrun/newGeneCopies/CEP85/CEP85_partitions/CEP85_group1.fasta	../firstrun/newGeneCopies/CEP85/CEP85_partitions/CEP85_group1_CEP85OOORP11-231P20v5OOOSH3BGRL3.fasta	ZPLD2P,RP11-231P20.5,CEP85,SH3BGRL3,UBXN11,
../firstrun/newGeneCopies/SSU72P/SSU72P_partitions/SSU72P_group3.fasta	../firstrun/newGeneCopies/SSU72P/SSU72P_partitions/SSU72P_group3_SSU72P2OOOSSU72P3OOOSSU72P4.fasta	SSU72P5,SSU72P2,SSU72P3,SSU72P7,SSU72P6,SSU72P4,
../firstrun/newGeneCopies/PKN3/PKN3_partitions/PKN3_group1.fasta	../firstrun/newGeneCopies/PKN3/PKN3_partitions/PKN3_group1_PKN3OOORN7SL560POOOZDHHC12.fasta	PKN3,ZDHHC12,RN7SL560P,
../firstrun/newGeneCopies/ENKD1/ENKD1_partitions/ENKD1_group1.fasta	../firstrun/newGeneCopies/ENKD1/ENKD1_partitions/ENKD1_group1_ENKD1OOOACDOOOC16orf86.fasta	ENKD1,PARD6A,C16orf86,ACD,
../firstrun/newGeneCopies/TRIM50/TRIM50_partitions/TRIM50_group1.fasta	../firstrun/newGeneCopies/TRIM50/TRIM50_partitions/TRIM50_group1_TRIM50OOOAC005488v11OOOAC006014v8.fasta	TRIM50,RP11-483G21.3,TRIM74,STAG3L1,AC005488.11,FKBP6,STAG3L3,CH17-264B6.5,AC006014.8,TRIM73,
../firstrun/newGeneCopies/ABCA7/ABCA7_partitions/ABCA7_group1.fasta	../firstrun/newGeneCopies/ABCA7/ABCA7_partitions/ABCA7_group1_ABCA7OOOAC011558v5OOOARHGAP45.fasta	AC011558.5,ARHGAP45,ABCA7,CNN2,
../firstrun/newGeneCopies/LOXL1/LOXL1_partitions/LOXL1_group1.fasta	../firstrun/newGeneCopies/LOXL1/LOXL1_partitions/LOXL1_group1_LOXL1OOOLOXL1-AS1.fasta	LOXL1,LOXL1-AS1,
../firstrun/newGeneCopies/IL18BP/IL18BP_partitions/IL18BP_group1.fasta	../firstrun/newGeneCopies/IL18BP/IL18BP_partitions/IL18BP_group1_IL18BPOOONUMA1OOORNF121.fasta	RNF121,NUMA1,IL18BP,
../firstrun/newGeneCopies/FBXO42/FBXO42_partitions/FBXO42_group1.fasta	../firstrun/newGeneCopies/FBXO42/FBXO42_partitions/FBXO42_group1_FBXO42OOOSZRD1.fasta	SZRD1,FBXO42,
../firstrun/newGeneCopies/CSF/CSF_partitions/CSF_group3.fasta	../firstrun/newGeneCopies/CSF/CSF_partitions/CSF_group3_CSF1.fasta	CSF1,
../firstrun/newGeneCopies/SMIM4/SMIM4_partitions/SMIM4_group1.fasta	../firstrun/newGeneCopies/SMIM4/SMIM4_partitions/SMIM4_group1_SMIM4OOONT5DC2OOOPBRM1.fasta	RNU6-856P,NT5DC2,PBRM1,SMIM4,RNU6ATAC16P,
../firstrun/newGeneCopies/TRIM74/TRIM74_partitions/TRIM74_group1.fasta	../firstrun/newGeneCopies/TRIM74/TRIM74_partitions/TRIM74_group1_TRIM74OOOAC005488v11OOOAC006014v8.fasta	STAG3L1,FKBP6,CH17-264B6.5,AC006014.8,TRIM73,AC005488.11,STAG3L3,TRIM74,RP11-483G21.3,TRIM50,
../firstrun/newGeneCopies/PTGDS/PTGDS_partitions/PTGDS_group1.fasta	../firstrun/newGeneCopies/PTGDS/PTGDS_partitions/PTGDS_group1_PTGDSOOOLCNL1OOOLINC02692.fasta	RP11-229P13.28,LCNL1,LINC02692,PTGDS,
../firstrun/newGeneCopies/SESN1/SESN1_partitions/SESN1_group5.fasta	../firstrun/newGeneCopies/SESN1/SESN1_partitions/SESN1_group5_SESN1OOOCEP57L1OOORNU6-653P.fasta	SESN1,RP11-787I22.3,RNU6-653P,CEP57L1,
../firstrun/newGeneCopies/GLT6D1/GLT6D1_partitions/GLT6D1_group1.fasta	../firstrun/newGeneCopies/GLT6D1/GLT6D1_partitions/GLT6D1_group1_GLT6D1.fasta	GLT6D1,
../firstrun/newGeneCopies/STX1A/STX1A_partitions/STX1A_group1.fasta	../firstrun/newGeneCopies/STX1A/STX1A_partitions/STX1A_group1_STX1AOOOBUD23OOOMIR4284.fasta	STX1A,MIR4284,BUD23,
../firstrun/newGeneCopies/TEX22/TEX22_partitions/TEX22_group1.fasta	../firstrun/newGeneCopies/TEX22/TEX22_partitions/TEX22_group1_TEX22OOOMTA1OOOPACS2.fasta	TEX22,MTA1,PACS2,RP11-521B24.3,
../firstrun/newGeneCopies/LAPTM5/LAPTM5_partitions/LAPTM5_group1.fasta	../firstrun/newGeneCopies/LAPTM5/LAPTM5_partitions/LAPTM5_group1_LAPTM5OOOMIR4420OOORP5-1166H10v4.fasta	MIR4420,LAPTM5,RP5-1166H10.4,
../firstrun/newGeneCopies/H3C14/H3C14_partitions/H3C14_group4.fasta	../firstrun/newGeneCopies/H3C14/H3C14_partitions/H3C14_group4_H3C14OOOH2AC18OOOH2AC19.fasta	H2AC18,H3C15,H4C15,H2BC20P,RP11-196G18.23,H2BC19P,H3C14,H2AC19,H4C14,
../firstrun/newGeneCopies/SELENOW/SELENOW_partitions/SELENOW_group2.fasta	../firstrun/newGeneCopies/SELENOW/SELENOW_partitions/SELENOW_group2_SELENOW.fasta	SELENOW,
../firstrun/newGeneCopies/MAGT1/MAGT1_partitions/MAGT1_group1.fasta	../firstrun/newGeneCopies/MAGT1/MAGT1_partitions/MAGT1_group1_MAGT1OOORN7SL460POOORNU6-854P.fasta	MAGT1,RNU6-854P,RN7SL460P,
../firstrun/newGeneCopies/DHX36/DHX36_partitions/DHX36_group1.fasta	../firstrun/newGeneCopies/DHX36/DHX36_partitions/DHX36_group1_DHX36.fasta	DHX36,
../firstrun/newGeneCopies/XXbac-BPG116M5.17/XXbac-BPG116M5.17_partitions/XXbac-BPG116M5.17_group1.fasta	../firstrun/newGeneCopies/XXbac-BPG116M5.17/XXbac-BPG116M5.17_partitions/XXbac-BPG116M5.17_group1_XXbac-BPG116M5v17OOOC2OOOC2-AS1.fasta	NELFE,C2,C2-AS1,CFB,C4B-AS1,CYP21A2,XXbac-BPG116M5.17,
../firstrun/newGeneCopies/FOXO4/FOXO4_partitions/FOXO4_group1.fasta	../firstrun/newGeneCopies/FOXO4/FOXO4_partitions/FOXO4_group1_FOXO4OOOCXorf65OOORP5-1091N2v12.fasta	RP5-1091N2.12,FOXO4,CXorf65,
../firstrun/newGeneCopies/FBXW10/FBXW10_partitions/FBXW10_group1.fasta	../firstrun/newGeneCopies/FBXW10/FBXW10_partitions/FBXW10_group1_FBXW10OOOCDRT1OOORP11-385D13v1.fasta	TRIM16L,CDRT1,RP11-385D13.1,TVP23B,TVP23C-CDRT4,FBXW10,TVP23C,
../firstrun/newGeneCopies/IGLV3/IGLV3_partitions/IGLV3_group8.fasta	../firstrun/newGeneCopies/IGLV3/IGLV3_partitions/IGLV3_group8_IGLV3-10OOOIGLV3-12OOOIGLV3-13.fasta	IGLV3-24,IGLV3-19,IGLV3-27,LL22NC03-24A12.9,LL22NC03-102D1.16,MIR650,IGLV3-26,IGLV2-5,IGLV3-21,IGLV3-29,IGLVVI-22-1,IGLV2-14,LL22NC03-84E4.8,IGLV3-15,IGLV3-10,IGLV2-8,IGLV3-16,IGLV3-13,IGLV3-9,LL22NC03-24A12.8,IGLVI-20,IGLV2-18,IGLV3-4,IGLV3-6,LL22NC03-84E4.11,IGLV2-11,IGLV3-25,IGLV3-12,IGLV3-17,IGLV2-28,IGLV3-7,LL22NC03-102D1.18,IGLV2-23,IGLV3-22,
../firstrun/newGeneCopies/BUB1/BUB1_partitions/BUB1_group1.fasta	../firstrun/newGeneCopies/BUB1/BUB1_partitions/BUB1_group1_BUB1.fasta	BUB1,
../firstrun/newGeneCopies/METTL27/METTL27_partitions/METTL27_group3.fasta	../firstrun/newGeneCopies/METTL27/METTL27_partitions/METTL27_group3_METTL27OOOCLDN4.fasta	METTL27,CLDN4,
../firstrun/newGeneCopies/NELFB/NELFB_partitions/NELFB_group1.fasta	../firstrun/newGeneCopies/NELFB/NELFB_partitions/NELFB_group1_NELFBOOOSTPG3OOOSTPG3-AS1.fasta	NELFB,STPG3,STPG3-AS1,
../firstrun/newGeneCopies/NKTR/NKTR_partitions/NKTR_group1.fasta	../firstrun/newGeneCopies/NKTR/NKTR_partitions/NKTR_group1_NKTROOORP4-613B23v1OOOSEC22C.fasta	SEC22C,RP4-613B23.1,NKTR,
../firstrun/newGeneCopies/CDC45/CDC45_partitions/CDC45_group1.fasta	../firstrun/newGeneCopies/CDC45/CDC45_partitions/CDC45_group1_CDC45OOOAC000082v4OOOCLDN5.fasta	AC000082.4,CLDN5,UFD1,CDC45,
../firstrun/newGeneCopies/CHMP6/CHMP6_partitions/CHMP6_group1.fasta	../firstrun/newGeneCopies/CHMP6/CHMP6_partitions/CHMP6_group1_CHMP6OOOCTD-2561B21v7OOOCTD-2561B21v8.fasta	CTD-2561B21.8,CTD-2561B21.7,CHMP6,
../firstrun/newGeneCopies/VIPR2/VIPR2_partitions/VIPR2_group1.fasta	../firstrun/newGeneCopies/VIPR2/VIPR2_partitions/VIPR2_group1_VIPR2OOOLINC00689OOORP5-1058P19v1.fasta	VIPR2,LINC00689,RP5-1058P19.1,
../firstrun/newGeneCopies/SEPTIN1/SEPTIN1_partitions/SEPTIN1_group1.fasta	../firstrun/newGeneCopies/SEPTIN1/SEPTIN1_partitions/SEPTIN1_group1_SEPTIN1OOOMYLPFOOORP11-297C4v6.fasta	RP11-297C4.6,SEPTIN1,ZNF48,MYLPF,
../firstrun/newGeneCopies/CA4/CA4_partitions/CA4_group1.fasta	../firstrun/newGeneCopies/CA4/CA4_partitions/CA4_group1_CA4.fasta	CA4,
../firstrun/newGeneCopies/MPI/MPI_partitions/MPI_group1.fasta	../firstrun/newGeneCopies/MPI/MPI_partitions/MPI_group1_MPIOOOFAM219B.fasta	FAM219B,MPI,
../firstrun/newGeneCopies/ZMYND19/ZMYND19_partitions/ZMYND19_group1.fasta	../firstrun/newGeneCopies/ZMYND19/ZMYND19_partitions/ZMYND19_group1_ZMYND19OOODPH7.fasta	DPH7,ZMYND19,
../firstrun/newGeneCopies/NXF2/NXF2_partitions/NXF2_group1.fasta	../firstrun/newGeneCopies/NXF2/NXF2_partitions/NXF2_group1_NXF2OOONXF2BOOOGHc-1077H7v2.fasta	NXF2,NXF4,RP11-353J17.5,NXF5,GHc-1077H7.2,NXF2B,RP11-353J17.3,
../firstrun/newGeneCopies/GSTM5/GSTM5_partitions/GSTM5_group1.fasta	../firstrun/newGeneCopies/GSTM5/GSTM5_partitions/GSTM5_group1_GSTM5OOOAC000032v2OOOGSTM1.fasta	GSTM2,GSTM4,RPL7P8,GSTM3,GSTM1,RP4-735C1.4,AC000032.2,GSTM5,
../firstrun/newGeneCopies/GSTM5/GSTM5_partitions/GSTM5_group4.fasta	../firstrun/newGeneCopies/GSTM5/GSTM5_partitions/GSTM5_group4_GSTM5OOOEPS8L3OOORP4-735C1v4.fasta	EPS8L3,RP4-735C1.4,GSTM5,
../firstrun/newGeneCopies/NLRP7/NLRP7_partitions/NLRP7_group1.fasta	../firstrun/newGeneCopies/NLRP7/NLRP7_partitions/NLRP7_group1_NLRP7OOOCTC-550B14v10OOOENSG00000273506.fasta	ENSG00000273506,ENSG00000275822,ENSG00000277629,ENSG00000273916,NLRP2,ENSG00000274053,NLRP7,ENSG00000277824,NCR1,CTC-550B14.10,
../firstrun/newGeneCopies/DGKH/DGKH_partitions/DGKH_group1.fasta	../firstrun/newGeneCopies/DGKH/DGKH_partitions/DGKH_group1_DGKHOOOMAPK6P3OOORP11-187A9v3.fasta	DGKH,RP11-187A9.3,MAPK6P3,
../firstrun/newGeneCopies/DGKH/DGKH_partitions/DGKH_group2.fasta	../firstrun/newGeneCopies/DGKH/DGKH_partitions/DGKH_group2_DGKHOOOCHCHD2P11OOOFHP1.fasta	DGKH,CHCHD2P11,FHP1,
../firstrun/newGeneCopies/C13orf46/C13orf46_partitions/C13orf46_group1.fasta	../firstrun/newGeneCopies/C13orf46/C13orf46_partitions/C13orf46_group1_C13orf46.fasta	C13orf46,
../firstrun/newGeneCopies/KCNK9/KCNK9_partitions/KCNK9_group2.fasta	../firstrun/newGeneCopies/KCNK9/KCNK9_partitions/KCNK9_group2_KCNK9.fasta	KCNK9,
../firstrun/newGeneCopies/KCNK9/KCNK9_partitions/KCNK9_group1.fasta	../firstrun/newGeneCopies/KCNK9/KCNK9_partitions/KCNK9_group1_KCNK9.fasta	KCNK9,
../firstrun/newGeneCopies/ZNF146/ZNF146_partitions/ZNF146_group1.fasta	../firstrun/newGeneCopies/ZNF146/ZNF146_partitions/ZNF146_group1_ZNF146OOOZNF565.fasta	ZNF146,ZNF565,
../firstrun/newGeneCopies/NPEPPS/NPEPPS_partitions/NPEPPS_group2.fasta	../firstrun/newGeneCopies/NPEPPS/NPEPPS_partitions/NPEPPS_group2_NPEPPSOOONPEPPSP1OOOCH17-258A22v4.fasta	NPEPPS,Y_RNA,CH17-258A22.4,KPNB1-DT,TBC1D3I,NPEPPSP1,TBC1D3L,TBC1D3D,CH17-260O16.1,
../firstrun/newGeneCopies/RPTOR/RPTOR_partitions/RPTOR_group23.fasta	../firstrun/newGeneCopies/RPTOR/RPTOR_partitions/RPTOR_group23_RPTOROOORPL32P31.fasta	RPTOR,RPL32P31,
../firstrun/newGeneCopies/RPTOR/RPTOR_partitions/RPTOR_group26.fasta	../firstrun/newGeneCopies/RPTOR/RPTOR_partitions/RPTOR_group26_RPTOR.fasta	RPTOR,
../firstrun/newGeneCopies/RPTOR/RPTOR_partitions/RPTOR_group29.fasta	../firstrun/newGeneCopies/RPTOR/RPTOR_partitions/RPTOR_group29_RPTOROOOCTD-2561B21v3OOOCTD-2561B21v4.fasta	CTD-2561B21.4,RPTOR,CTD-2561B21.3,CTD-2561B21.5,
../firstrun/newGeneCopies/RPTOR/RPTOR_partitions/RPTOR_group28.fasta	../firstrun/newGeneCopies/RPTOR/RPTOR_partitions/RPTOR_group28_RPTOROOORP11-28G8v2.fasta	RPTOR,RP11-28G8.2,
../firstrun/newGeneCopies/CHRFAM7A/CHRFAM7A_partitions/CHRFAM7A_group2.fasta	../firstrun/newGeneCopies/CHRFAM7A/CHRFAM7A_partitions/CHRFAM7A_group2_CHRFAM7AOOOAC091057v4OOOARHGAP11B.fasta	RP11-736I24.5,DNM1P32,AC091057.4,RP11-736I24.3,DNM1P50,RP11-382B18.3,DNM1P28,CHRFAM7A,ARHGAP11B,U8,ULK4P2,ULK4P3,CHRNA7,RP13-395E19.3,ULK4P1,ENSG00000282088,RP11-382B18.6,ENSG00000274542,
../firstrun/newGeneCopies/HSBP1L1/HSBP1L1_partitions/HSBP1L1_group1.fasta	../firstrun/newGeneCopies/HSBP1L1/HSBP1L1_partitions/HSBP1L1_group1_HSBP1L1OOORP11-248M19v2OOOTXNL4A.fasta	RP11-248M19.2,TXNL4A,HSBP1L1,
../firstrun/newGeneCopies/NOSTRIN/NOSTRIN_partitions/NOSTRIN_group1.fasta	../firstrun/newGeneCopies/NOSTRIN/NOSTRIN_partitions/NOSTRIN_group1_NOSTRINOOOCERS6-AS1OOOSPC25.fasta	NOSTRIN,SPC25,CERS6-AS1,
../firstrun/newGeneCopies/PTPN18/PTPN18_partitions/PTPN18_group1.fasta	../firstrun/newGeneCopies/PTPN18/PTPN18_partitions/PTPN18_group1_PTPN18.fasta	PTPN18,
../firstrun/newGeneCopies/SNORA70/SNORA70_partitions/SNORA70_group4.fasta	../firstrun/newGeneCopies/SNORA70/SNORA70_partitions/SNORA70_group4_SNORA70BOOOAC016894v1OOOUSP34.fasta	USP34,SNORA70B,AC016894.1,
../firstrun/newGeneCopies/ZNF573/ZNF573_partitions/ZNF573_group4.fasta	../firstrun/newGeneCopies/ZNF573/ZNF573_partitions/ZNF573_group4_ZNF573OOOCTD-2554C21v1OOOCTD-2554C21v2.fasta	CTD-2554C21.2,ZNF573,CTD-2554C21.1,
../firstrun/newGeneCopies/KLF14/KLF14_partitions/KLF14_group1.fasta	../firstrun/newGeneCopies/KLF14/KLF14_partitions/KLF14_group1_KLF14.fasta	KLF14,
../firstrun/newGeneCopies/SDF2L1/SDF2L1_partitions/SDF2L1_group1.fasta	../firstrun/newGeneCopies/SDF2L1/SDF2L1_partitions/SDF2L1_group1_SDF2L1OOOCCDC116OOOKB-1440D3v14.fasta	CCDC116,SDF2L1,KB-1440D3.14,
../firstrun/newGeneCopies/ABCA1/ABCA1_partitions/ABCA1_group3.fasta	../firstrun/newGeneCopies/ABCA1/ABCA1_partitions/ABCA1_group3_ABCA1OOORP11-217B7v2.fasta	RP11-217B7.2,ABCA1,
../firstrun/newGeneCopies/ABCA1/ABCA1_partitions/ABCA1_group2.fasta	../firstrun/newGeneCopies/ABCA1/ABCA1_partitions/ABCA1_group2_ABCA1.fasta	ABCA1,
../firstrun/newGeneCopies/ABCA1/ABCA1_partitions/ABCA1_group1.fasta	../firstrun/newGeneCopies/ABCA1/ABCA1_partitions/ABCA1_group1_ABCA1.fasta	ABCA1,
../firstrun/newGeneCopies/IGHE/IGHE_partitions/IGHE_group2.fasta	../firstrun/newGeneCopies/IGHE/IGHE_partitions/IGHE_group2_IGHEOOOIGHEP1.fasta	IGHEP1,IGHE,
../firstrun/newGeneCopies/NMB/NMB_partitions/NMB_group2.fasta	../firstrun/newGeneCopies/NMB/NMB_partitions/NMB_group2_NMBOOOWDR73.fasta	NMB,WDR73,
../firstrun/newGeneCopies/LZTFL1/LZTFL1_partitions/LZTFL1_group1.fasta	../firstrun/newGeneCopies/LZTFL1/LZTFL1_partitions/LZTFL1_group1_LZTFL1OOORP11-852E15v2OOORP11-852E15v3.fasta	RP11-852E15.2,RP11-852E15.3,SDHDP4,LZTFL1,
../firstrun/newGeneCopies/LZTFL1/LZTFL1_partitions/LZTFL1_group2.fasta	../firstrun/newGeneCopies/LZTFL1/LZTFL1_partitions/LZTFL1_group2_LZTFL1OOOCCR9OOOFYCO1.fasta	FYCO1,Y_RNA,CCR9,LZTFL1,
../firstrun/newGeneCopies/ELSPBP1/ELSPBP1_partitions/ELSPBP1_group1.fasta	../firstrun/newGeneCopies/ELSPBP1/ELSPBP1_partitions/ELSPBP1_group1_ELSPBP1OOOBSPH1.fasta	BSPH1,ELSPBP1,
../firstrun/newGeneCopies/ALDH3A/ALDH3A_partitions/ALDH3A_group15.fasta	../firstrun/newGeneCopies/ALDH3A/ALDH3A_partitions/ALDH3A_group15_ALDH3A2OOOCTD-2104P17v2OOOENSG10010136111v1.fasta	SLC47A2,Y_RNA,ENSG10010136111.1,ALDH3A2,CTD-2104P17.2,
../firstrun/newGeneCopies/ALDH3A/ALDH3A_partitions/ALDH3A_group16.fasta	../firstrun/newGeneCopies/ALDH3A/ALDH3A_partitions/ALDH3A_group16_ALDH3A1OOORP11-311F12v2.fasta	RP11-311F12.2,ALDH3A1,
../firstrun/newGeneCopies/SPDYE11/SPDYE11_partitions/SPDYE11_group1.fasta	../firstrun/newGeneCopies/SPDYE11/SPDYE11_partitions/SPDYE11_group1_SPDYE11OOOAC004951v6OOOAC004980v9.fasta	SPDYE10P,CH17-264B6.6,SPDYE11,POLR2J4,SPDYE20P,PMS2P6,SPDYE8,POLR2J3,RP5-1165K10.2,SPDYE9,AC004951.6,RBAK-RBAKDN,SPDYE5,SPDYE14,RP11-467H10.2,CH17-264B6.3,RP11-514P8.10,SPDYE3,PMS2P10,SPDYE15P,PMS2P1,SPDYE21,PMS2P8,SPDYE13,SPDYE2,SPDYE14P,SPDYE19P,RNF216P1,SPDYE17,RP11-514P8.7,PMS2P4,PMS2P2,SPDYE16,PMS2P7,SPDYE6,RP11-577H5.5,RP5-1022I14.2,AC004980.9,SPDYE15,SPDYE7P,SPDYE18,PMS2CL,DTX2P1-UPK3BP1-PMS2P11,SPDYE1,SPDYE13P,SPDYE12P,CH17-264B6.1,SPDYE2B,
../firstrun/newGeneCopies/DEFB105/DEFB105_partitions/DEFB105_group1.fasta	../firstrun/newGeneCopies/DEFB105/DEFB105_partitions/DEFB105_group1_DEFB105AOOODEFB105BOOODEFB106A.fasta	DEFB106A,DEFB105A,DEFB107A,DEFB107B,DEFB105B,DEFB106B,
../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group2.fasta	../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group2_UTRNOOORP1-91J24v3.fasta	UTRN,RP1-91J24.3,
../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group3.fasta	../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group3_UTRN.fasta	UTRN,
../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group1.fasta	../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group1_UTRN.fasta	UTRN,
../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group6.fasta	../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group6_UTRN.fasta	UTRN,
../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group7.fasta	../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group7_UTRN.fasta	UTRN,
../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group4.fasta	../firstrun/newGeneCopies/UTRN/UTRN_partitions/UTRN_group4_UTRN.fasta	UTRN,
../firstrun/newGeneCopies/GALT/GALT_partitions/GALT_group1.fasta	../firstrun/newGeneCopies/GALT/GALT_partitions/GALT_group1_GALTOOOIL11RAOOORP11-195F19v29.fasta	IL11RA,SIGMAR1,GALT,RP11-195F19.29,
../firstrun/newGeneCopies/SPDYE2/SPDYE2_partitions/SPDYE2_group1.fasta	../firstrun/newGeneCopies/SPDYE2/SPDYE2_partitions/SPDYE2_group1_SPDYE2OOOSPDYE20POOOSPDYE21.fasta	SPDYE5,CH17-264B6.3,RP11-514P8.7,RP5-1022I14.2,SPDYE11,CH17-264B6.1,RP11-514P8.10,PMS2P1,SPDYE2B,PMS2P7,SPDYE2,SPDYE7P,SPDYE10P,SPDYE13P,SPDYE14P,CH17-264B6.6,RNF216P1,POLR2J4,SPDYE21,POLR2J3,RP11-577H5.5,SPDYE13,AC004951.6,PMS2P6,SPDYE15P,SPDYE8,PMS2P8,RP5-1165K10.2,SPDYE12P,PMS2CL,PMS2P10,PMS2P2,SPDYE15,SPDYE14,DTX2P1-UPK3BP1-PMS2P11,RP11-467H10.2,SPDYE20P,AC004980.9,RBAK-RBAKDN,SPDYE1,SPDYE16,SPDYE3,SPDYE18,SPDYE9,SPDYE6,PMS2P4,SPDYE19P,SPDYE17,
../firstrun/newGeneCopies/TINAGL1/TINAGL1_partitions/TINAGL1_group1.fasta	../firstrun/newGeneCopies/TINAGL1/TINAGL1_partitions/TINAGL1_group1_TINAGL1OOOLINC01226OOORP11-73M7v1.fasta	LINC01226,TINAGL1,RP11-73M7.1,
../firstrun/newGeneCopies/IGHV4/IGHV4_partitions/IGHV4_group1.fasta	../firstrun/newGeneCopies/IGHV4/IGHV4_partitions/IGHV4_group1_IGHV4-4OOOIGHV4OR15-8OOOENSG00000288313.fasta	RP11-294C11.2,RP11-294C11.5,ENSG00000288413,IGHV1-3,IGHV4-4,IGHV4OR15-8,IGHV1OR15-3,ENSG00000288313,
../firstrun/newGeneCopies/SBDS/SBDS_partitions/SBDS_group1.fasta	../firstrun/newGeneCopies/SBDS/SBDS_partitions/SBDS_group1_SBDSOOOSBDSP1OOOTYW1.fasta	TYW1,TYW1B,SBDS,SBDSP1,
../firstrun/newGeneCopies/LRFN4/LRFN4_partitions/LRFN4_group1.fasta	../firstrun/newGeneCopies/LRFN4/LRFN4_partitions/LRFN4_group1_LRFN4OOOPC.fasta	PC,LRFN4,
../firstrun/newGeneCopies/RFC2/RFC2_partitions/RFC2_group1.fasta	../firstrun/newGeneCopies/RFC2/RFC2_partitions/RFC2_group1_RFC2OOOLAT2.fasta	RFC2,LAT2,
../firstrun/newGeneCopies/ACTL9/ACTL9_partitions/ACTL9_group1.fasta	../firstrun/newGeneCopies/ACTL9/ACTL9_partitions/ACTL9_group1_ACTL9OOOAC093230v2.fasta	ACTL9,AC093230.2,
../firstrun/newGeneCopies/TRIM51GP/TRIM51GP_partitions/TRIM51GP_group3.fasta	../firstrun/newGeneCopies/TRIM51GP/TRIM51GP_partitions/TRIM51GP_group3_TRIM51GPOOORP11-163O19v1OOORP11-163O19v10.fasta	TRIM51HP,RP11-163O19.3,TRIM51,RP11-72M10.5,TRIM53CP,RP11-163O19.1,RP11-738O11.9,TRIM51BP,TRIM51EP,TRIM51CP,TRIM53AP,RP11-163O19.16,RP11-163O19.10,TRIM51DP,TRIM53BP,TRIM51GP,TRIM51FP,
../firstrun/newGeneCopies/CTD-3051L14.15/CTD-3051L14.15_partitions/CTD-3051L14.15_group1.fasta	../firstrun/newGeneCopies/CTD-3051L14.15/CTD-3051L14.15_partitions/CTD-3051L14.15_group1_CTD-3051L14v15OOOOR5M2POOOOR5M3.fasta	OR5M2P,OR5M9,CTD-3051L14.15,OR5M4P,OR5M3,
../firstrun/newGeneCopies/KMT2C/KMT2C_partitions/KMT2C_group1.fasta	../firstrun/newGeneCopies/KMT2C/KMT2C_partitions/KMT2C_group1_KMT2COOOAC005301v9OOOAC027612v3.fasta	RP11-289H16.1,Y_RNA,AL078471.5,CH17-13I23.3,KMT2C,RP5-1135M2.5,LSP1P5,RP11-763B22.11,CH17-13I23.1,CH17-125A10.1,RP4-614C10.3,LINC02802,BAGE2,TPTEP1,LSP1P4,RP11-341D18.2,KB-67B5.18,AC027612.3,FABP5P3,AC005301.9,RP11-341D18.6,
../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group1.fasta	../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group1_CNTN4OOOCNTN4-AS2OOORP11-176P14v2.fasta	RP11-176P14.2,CNTN4-AS2,CNTN4,
../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group17.fasta	../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group17_CNTN4OOOCNTN4-AS1OOOIL5RA.fasta	CNTN4-AS1,CNTN4,IL5RA,
../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group15.fasta	../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group15_CNTN4OOODNAJC19P4.fasta	DNAJC19P4,CNTN4,
../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group3.fasta	../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group3_CNTN4.fasta	CNTN4,
../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group2.fasta	../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group2_CNTN4.fasta	CNTN4,
../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group9.fasta	../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group9_CNTN4.fasta	CNTN4,
../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group8.fasta	../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group8_CNTN4.fasta	CNTN4,
../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group12.fasta	../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group12_CNTN4.fasta	CNTN4,
../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group11.fasta	../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group11_CNTN4.fasta	CNTN4,
../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group6.fasta	../firstrun/newGeneCopies/CNTN4/CNTN4_partitions/CNTN4_group6_CNTN4OOOHINT2P1.fasta	HINT2P1,CNTN4,
../firstrun/newGeneCopies/HLA-P/HLA-P_partitions/HLA-P_group1.fasta	../firstrun/newGeneCopies/HLA-P/HLA-P_partitions/HLA-P_group1_HLA-POOOHLA-VOOORPL7AP7.fasta	RPL7AP7,HLA-V,HLA-P,
../firstrun/newGeneCopies/IL27/IL27_partitions/IL27_group1.fasta	../firstrun/newGeneCopies/IL27/IL27_partitions/IL27_group1_IL27OOOAPOBROOORP11-231C14v10.fasta	APOBR,IL27,RP11-231C14.10,
../firstrun/newGeneCopies/PNPT1/PNPT1_partitions/PNPT1_group2.fasta	../firstrun/newGeneCopies/PNPT1/PNPT1_partitions/PNPT1_group2_PNPT1.fasta	PNPT1,
../firstrun/newGeneCopies/LSM2/LSM2_partitions/LSM2_group1.fasta	../firstrun/newGeneCopies/LSM2/LSM2_partitions/LSM2_group1_LSM2OOOHSPA1LOOOVARS1.fasta	VARS1,LSM2,HSPA1L,
../firstrun/newGeneCopies/ENSG00000283886/ENSG00000283886_partitions/ENSG00000283886_group1.fasta	../firstrun/newGeneCopies/ENSG00000283886/ENSG00000283886_partitions/ENSG00000283886_group1_ENSG00000283886OOOCR769767v2OOOFAM227B.fasta	FGF7P2,RP11-211N8.3,LERFS,RP11-211N8.2,FGF7P5,CR769767.2,FGF7P3,RP11-104G3.2,RP11-475I24.9,RP11-111F5.8,FGF7,FGF7P8,ENSG00000283886,FGF7P6,LINC01906,RP11-111F5.6,FGF7P1,RP11-111F5.4,RP11-262H14.4,GLIDR,RP11-475I24.3,RP11-475I24.8,RP11-175I6.6,RP11-175I6.5,FGF7P4,LINC01189,FGF7P7,FAM227B,
../firstrun/newGeneCopies/HLA-W/HLA-W_partitions/HLA-W_group1.fasta	../firstrun/newGeneCopies/HLA-W/HLA-W_partitions/HLA-W_group1_HLA-WOOOHLA-AOOOHLA-P.fasta	HLA-W,HLA-P,RPL7AP7,HLA-A,HLA-V,
../firstrun/newGeneCopies/NUTM/NUTM_partitions/NUTM_group1.fasta	../firstrun/newGeneCopies/NUTM/NUTM_partitions/NUTM_group1_NUTM2AOOONUTM2A-AS1OOONUTM2B.fasta	NUTM2B-AS1,RP11-119F19.5,RP11-506M13.3,BEND3P3,FAM245A,ABC7-42404400C24.1,LINC00863,RP11-38L15.3,RP11-182L21.5,NUTM2A-AS1,RP11-322M19.5,RP11-119F19.4,NUTM2A,SYT15,BEND3P1,NUTM2F,NUTM2B,RP11-322M19.4,NUTM2E,RP11-395A13.2,RP11-182L21.6,NUTM2G,RP11-399L7.4,RP11-395A13.3,RP11-38L15.2,RP11-307E17.8,NUTM2HP,MFSD14C,NUTM2D,AMMECR1L,
../firstrun/newGeneCopies/ARMC1/ARMC1_partitions/ARMC1_group2.fasta	../firstrun/newGeneCopies/ARMC1/ARMC1_partitions/ARMC1_group2_ARMC1.fasta	ARMC1,
../firstrun/newGeneCopies/C1orf/C1orf_partitions/C1orf_group29.fasta	../firstrun/newGeneCopies/C1orf/C1orf_partitions/C1orf_group29_C1orf54OOOAPH1AOOOCA14.fasta	CA14,C1orf54,CIART,APH1A,
../firstrun/newGeneCopies/C1orf/C1orf_partitions/C1orf_group30.fasta	../firstrun/newGeneCopies/C1orf/C1orf_partitions/C1orf_group30_C1orf56OOOBNIPLOOOCDC42SE1.fasta	BNIPL,C1orf56,CDC42SE1,MLLT11,
../firstrun/newGeneCopies/C1orf/C1orf_partitions/C1orf_group26.fasta	../firstrun/newGeneCopies/C1orf/C1orf_partitions/C1orf_group26_C1orf194OOOELAPOR1OOORP5-1065J22v4.fasta	RP5-1065J22.4,ELAPOR1,C1orf194,
../firstrun/newGeneCopies/C1orf/C1orf_partitions/C1orf_group58.fasta	../firstrun/newGeneCopies/C1orf/C1orf_partitions/C1orf_group58_C1orf100OOORP11-518L10v5.fasta	RP11-518L10.5,C1orf100,
../firstrun/newGeneCopies/C1orf/C1orf_partitions/C1orf_group55.fasta	../firstrun/newGeneCopies/C1orf/C1orf_partitions/C1orf_group55_C1orf35OOOARF1OOOMIR3620.fasta	C1orf35,MIR3620,MRPL55,ARF1,
../firstrun/newGeneCopies/LONRF1/LONRF1_partitions/LONRF1_group1.fasta	../firstrun/newGeneCopies/LONRF1/LONRF1_partitions/LONRF1_group1_LONRF1OOOMIR3926-1OOOMIR3926-2.fasta	MIR5692A2,LONRF1,MIR3926-1,MIR3926-2,
../firstrun/newGeneCopies/FOSB/FOSB_partitions/FOSB_group1.fasta	../firstrun/newGeneCopies/FOSB/FOSB_partitions/FOSB_group1_FOSBOOOERCC1.fasta	ERCC1,FOSB,
../firstrun/newGeneCopies/CTSS/CTSS_partitions/CTSS_group1.fasta	../firstrun/newGeneCopies/CTSS/CTSS_partitions/CTSS_group1_CTSS.fasta	CTSS,
../firstrun/newGeneCopies/GIP/GIP_partitions/GIP_group40.fasta	../firstrun/newGeneCopies/GIP/GIP_partitions/GIP_group40_GIPOOOENSG10010137419v1.fasta	GIP,ENSG10010137419.1,
../firstrun/newGeneCopies/GIP/GIP_partitions/GIP_group41.fasta	../firstrun/newGeneCopies/GIP/GIP_partitions/GIP_group41_GIPC3OOOTBXA2R.fasta	TBXA2R,GIPC3,
../firstrun/newGeneCopies/LST1/LST1_partitions/LST1_group1.fasta	../firstrun/newGeneCopies/LST1/LST1_partitions/LST1_group1_LST1OOOLTBOOONCR3.fasta	NCR3,LTB,LST1,
../firstrun/newGeneCopies/NONO/NONO_partitions/NONO_group2.fasta	../firstrun/newGeneCopies/NONO/NONO_partitions/NONO_group2_NONOOOOCTD-2033A16v2OOOITGB1BP2.fasta	ITGB1BP2,NOB1,ZMYM3,NONO,WWP2,CTD-2033A16.2,
../firstrun/newGeneCopies/TTYH1/TTYH1_partitions/TTYH1_group1.fasta	../firstrun/newGeneCopies/TTYH1/TTYH1_partitions/TTYH1_group1_TTYH1OOOAC008746v12OOOAC008746v3.fasta	CTD-2587H19.2,AC008746.12,CTD-2587H19.3,AC008746.3,XXbac-BCX535A19.2,TTYH1,XXbac-BPG638F6.3,KIR2DL1,
../firstrun/newGeneCopies/MCCC2/MCCC2_partitions/MCCC2_group1.fasta	../firstrun/newGeneCopies/MCCC2/MCCC2_partitions/MCCC2_group1_MCCC2.fasta	MCCC2,
../firstrun/newGeneCopies/AMER2/AMER2_partitions/AMER2_group1.fasta	../firstrun/newGeneCopies/AMER2/AMER2_partitions/AMER2_group1_AMER2OOOLINC00463OOOLINC01053.fasta	AMER2,LINC01053,LINC00463,
../firstrun/newGeneCopies/ZNF354/ZNF354_partitions/ZNF354_group4.fasta	../firstrun/newGeneCopies/ZNF354/ZNF354_partitions/ZNF354_group4_ZNF354COOORP11-281O15v7.fasta	ZNF354C,RP11-281O15.7,
../firstrun/newGeneCopies/ZNF354/ZNF354_partitions/ZNF354_group2.fasta	../firstrun/newGeneCopies/ZNF354/ZNF354_partitions/ZNF354_group2_ZNF354AOOOZNF354BOOOCTD-2537M22v2.fasta	CTD-2537M22.2,ZNF354A,RNU1-39P,ZNF354B,
../firstrun/newGeneCopies/C5orf/C5orf_partitions/C5orf_group14.fasta	../firstrun/newGeneCopies/C5orf/C5orf_partitions/C5orf_group14_C5orf51OOOFBXO4.fasta	FBXO4,C5orf51,
../firstrun/newGeneCopies/KIR3DL3/KIR3DL3_partitions/KIR3DL3_group1.fasta	../firstrun/newGeneCopies/KIR3DL3/KIR3DL3_partitions/KIR3DL3_group1_KIR3DL3OOOCTB-61M7v1OOOENSG00000275583.fasta	GU182360.3,ENSG00000283742,GU182354.5,GU182354.3,ENSG00000275583,ENSG00000283902,ENSG00000284511,KIR2DS4,KIR3DL2,KIR2DL5B,KIR2DL1,GU182352.4,GU182343.5,ENSG00000284101,ENSG00000284225,KIR3DL3,KIR2DS3,GU182339.6,ENSG00000284169,ENSG00000284555,CTB-61M7.1,KIR2DS5,ENSG00000288389,ENSG00000283784,ENSG00000284033,KIR2DL4,GU182347.12,ENSG00000284053,ENSG00000288613,KIR3DS1,KIR3DP1,KIR2DS2,ENSG00000288650,GU182355.5,KIR2DL2,GU182351.6,GU182353.5,ENSG00000288381,GU182357.5,GU182358.3,ENSG00000283722,GU182352.6,KIR2DL5A,KIR2DS1,GU182343.7,ENSG00000283716,KIR2DL3,ENSG00000284301,ENSG00000283763,KIR2DP1,GU182338.2,KIR3DL1,ENSG00000284580,GU182339.12,ENSG00000288316,GU182351.11,
../firstrun/newGeneCopies/ZNF679/ZNF679_partitions/ZNF679_group2.fasta	../firstrun/newGeneCopies/ZNF679/ZNF679_partitions/ZNF679_group2_ZNF679OOOLINC01005OOORP11-3N2v16.fasta	ZNF716,ZNF679,RP11-3N2.16,RP11-468B6.5,LINC01005,ZNF735,
../firstrun/newGeneCopies/PMP22/PMP22_partitions/PMP22_group1.fasta	../firstrun/newGeneCopies/PMP22/PMP22_partitions/PMP22_group1_PMP22OOOAC005703v1OOOMIR4731.fasta	RP11-849N15.1,PMP22,MIR4731,AC005703.1,RP11-849N15.3,RP11-849N15.6,
../firstrun/newGeneCopies/SRGAP/SRGAP_partitions/SRGAP_group081001.fasta	../firstrun/newGeneCopies/SRGAP/SRGAP_partitions/SRGAP_group081001_SRGAP2OOOSRGAP2-AS1OOOSRGAP2B.fasta	FAM72A,FAM72C,SRGAP2B,LINC02798,RP11-289H16.1,RP11-763B22.7,RP11-421E17.4,FAM72B,SRGAP2D,FAM72D,CH17-13I23.1,LINC02799,SRGAP2,SRGAP2C,SRGAP2-AS1,
../firstrun/newGeneCopies/SRGAP/SRGAP_partitions/SRGAP_group32.fasta	../firstrun/newGeneCopies/SRGAP/SRGAP_partitions/SRGAP_group32_SRGAP2.fasta	SRGAP2,
../firstrun/newGeneCopies/PDE6B/PDE6B_partitions/PDE6B_group1.fasta	../firstrun/newGeneCopies/PDE6B/PDE6B_partitions/PDE6B_group1_PDE6BOOOPDE6B-AS1OOOATP5ME.fasta	PDE6B-AS1,MYL5,PDE6B,ATP5ME,RP11-1191J2.5,
../firstrun/newGeneCopies/B3GAT3/B3GAT3_partitions/B3GAT3_group2.fasta	../firstrun/newGeneCopies/B3GAT3/B3GAT3_partitions/B3GAT3_group2_B3GAT3OOOEML3OOOGANAB.fasta	ROM1,GANAB,B3GAT3,EML3,
../firstrun/newGeneCopies/HIRA/HIRA_partitions/HIRA_group2.fasta	../firstrun/newGeneCopies/HIRA/HIRA_partitions/HIRA_group2_HIRAOOOAC000085v4.fasta	HIRA,AC000085.4,
../firstrun/newGeneCopies/HIRA/HIRA_partitions/HIRA_group3.fasta	../firstrun/newGeneCopies/HIRA/HIRA_partitions/HIRA_group3_HIRAOOOC22orf39OOORN7SL168P.fasta	RN7SL168P,C22orf39,HIRA,
../firstrun/newGeneCopies/HIRA/HIRA_partitions/HIRA_group4.fasta	../firstrun/newGeneCopies/HIRA/HIRA_partitions/HIRA_group4_HIRAOOOAC000068v5OOOC22orf39.fasta	HIRA,AC000068.5,C22orf39,MRPL40,UFD1,
../firstrun/newGeneCopies/KLHL20/KLHL20_partitions/KLHL20_group1.fasta	../firstrun/newGeneCopies/KLHL20/KLHL20_partitions/KLHL20_group1_KLHL20OOORP11-360D2v2.fasta	KLHL20,RP11-360D2.2,
../firstrun/newGeneCopies/CES1/CES1_partitions/CES1_group1.fasta	../firstrun/newGeneCopies/CES1/CES1_partitions/CES1_group1_CES1OOOCES1P1OOOCES1P2.fasta	CES1P1,CES1P2,CES1,
../firstrun/newGeneCopies/ALPI/ALPI_partitions/ALPI_group3.fasta	../firstrun/newGeneCopies/ALPI/ALPI_partitions/ALPI_group3_ALPI.fasta	ALPI,
../firstrun/newGeneCopies/CCNG1/CCNG1_partitions/CCNG1_group2.fasta	../firstrun/newGeneCopies/CCNG1/CCNG1_partitions/CCNG1_group2_CCNG1OOONUDCD2OOORP11-541P9v3.fasta	CCNG1,NUDCD2,RP11-541P9.3,
../firstrun/newGeneCopies/NFU1/NFU1_partitions/NFU1_group2.fasta	../firstrun/newGeneCopies/NFU1/NFU1_partitions/NFU1_group2_NFU1.fasta	NFU1,
../firstrun/newGeneCopies/KLRC2/KLRC2_partitions/KLRC2_group1.fasta	../firstrun/newGeneCopies/KLRC2/KLRC2_partitions/KLRC2_group1_KLRC2OOOKLRC1OOOKLRC3.fasta	RP11-277P12.6,KLRC3,KLRC1,KLRC4,KLRC2,KLRC4-KLRK1,
../firstrun/newGeneCopies/OASL/OASL_partitions/OASL_group1.fasta	../firstrun/newGeneCopies/OASL/OASL_partitions/OASL_group1_OASLOOOC12orf43.fasta	OASL,C12orf43,
../firstrun/newGeneCopies/BMP10/BMP10_partitions/BMP10_group1.fasta	../firstrun/newGeneCopies/BMP10/BMP10_partitions/BMP10_group1_BMP10.fasta	BMP10,
../firstrun/newGeneCopies/XYLT1/XYLT1_partitions/XYLT1_group2.fasta	../firstrun/newGeneCopies/XYLT1/XYLT1_partitions/XYLT1_group2_XYLT1OOORP11-1102P22v2OOORP11-1102P22v3.fasta	XYLT1,RP11-1102P22.3,RP11-1102P22.2,
../firstrun/newGeneCopies/XYLT1/XYLT1_partitions/XYLT1_group1.fasta	../firstrun/newGeneCopies/XYLT1/XYLT1_partitions/XYLT1_group1_XYLT1OOOCTD-2576D5v4.fasta	XYLT1,CTD-2576D5.4,
../firstrun/newGeneCopies/XYLT1/XYLT1_partitions/XYLT1_group4.fasta	../firstrun/newGeneCopies/XYLT1/XYLT1_partitions/XYLT1_group4_XYLT1OOOENSG00000285903OOORP11-567P19v1.fasta	XYLT1,RP11-567P19.1,RP11-567P19.2,ENSG00000285903,RP11-567P19.3,
../firstrun/newGeneCopies/MAPK7/MAPK7_partitions/MAPK7_group1.fasta	../firstrun/newGeneCopies/MAPK7/MAPK7_partitions/MAPK7_group1_MAPK7OOOB9D1OOOMFAP4.fasta	B9D1,MFAP4,MAPK7,
../firstrun/newGeneCopies/ZNF675/ZNF675_partitions/ZNF675_group25.fasta	../firstrun/newGeneCopies/ZNF675/ZNF675_partitions/ZNF675_group25_ZNF675.fasta	ZNF675,
../firstrun/newGeneCopies/ZNF675/ZNF675_partitions/ZNF675_group22.fasta	../firstrun/newGeneCopies/ZNF675/ZNF675_partitions/ZNF675_group22_ZNF675OOORP11-359H18v2OOORPS27P29.fasta	ZNF675,RP11-359H18.2,RPS27P29,
../firstrun/newGeneCopies/PSMB10/PSMB10_partitions/PSMB10_group1.fasta	../firstrun/newGeneCopies/PSMB10/PSMB10_partitions/PSMB10_group1_PSMB10OOOCTC-479C5v12OOOCTRL.fasta	CTRL,CTC-479C5.12,PSMB10,PSKH1,LCAT,
../firstrun/newGeneCopies/KIR2DL/KIR2DL_partitions/KIR2DL_group1.fasta	../firstrun/newGeneCopies/KIR2DL/KIR2DL_partitions/KIR2DL_group1_KIR2DL1OOOKIR2DL2OOOKIR2DL3.fasta	KIR2DL4,KIR3DL2,GU182339.12,ENSG00000284169,ENSG00000283742,CTB-61M7.1,ENSG00000284555,GU182360.3,ENSG00000288316,GU182357.5,KIR2DS1,GU182339.6,KIR2DL5B,KIR2DL3,KIR2DL1,GU182358.3,ENSG00000284225,ENSG00000283763,GU182343.5,KIR2DL2,ENSG00000284101,KIR2DS2,ENSG00000284580,ENSG00000283722,ENSG00000283716,KIR3DL3,ENSG00000284053,GU182343.7,KIR3DP1,KIR2DS5,ENSG00000288389,GU182353.5,GU182347.12,GU182354.3,ENSG00000288381,KIR2DS4,GU182338.2,ENSG00000288650,ENSG00000283902,ENSG00000284511,KIR2DP1,GU182351.6,GU182355.5,GU182354.5,KIR3DL1,KIR2DL5A,ENSG00000283784,KIR2DS3,ENSG00000288613,GU182351.11,GU182352.6,ENSG00000275583,ENSG00000284301,ENSG00000284033,KIR3DS1,GU182352.4,
../firstrun/newGeneCopies/MPHOSPH/MPHOSPH_partitions/MPHOSPH_group5.fasta	../firstrun/newGeneCopies/MPHOSPH/MPHOSPH_partitions/MPHOSPH_group5_MPHOSPH9OOOC12orf65OOOPITPNM2.fasta	MPHOSPH9,RP11-546D6.3,C12orf65,PITPNM2,
../firstrun/newGeneCopies/IGHD/IGHD_partitions/IGHD_group1.fasta	../firstrun/newGeneCopies/IGHD/IGHD_partitions/IGHD_group1_IGHDOOOIGHD1-1OOOIGHD1-14.fasta	IGHD5OR15-5B,IGHD5OR15-5A,LINC01193,IGHD3-10,AL122127.25,IGHD,IGHD1-20,IGHD1-1,IGHD4OR15-4A,IGHD5-12,IGHD3-9,IGHD1-14,IGHD1OR15-1B,IGHD6-19,IGHD1-7,FAM30C,IGHD2OR15-2A,IGHD5-18,IGHD2-15,IGHD2OR15-2B,FAM30A,IGHD3-16,ENSG00000288133,IGHD6-6,IGHD2-2,FAM30B,IGHD4-17,IGHD6-25,IGHD4-11,IGHD1OR15-1A,IGHD2-8,IGHD5-24,IGHD6-13,IGHD3-3,IGHD4OR15-4B,IGHD4-23,IGHD5-5,IGHD3OR15-3B,IGHD1-26,IGHD3-22,IGHD3OR15-3A,IGHD4-4,IGHD2-21,
../firstrun/newGeneCopies/RNF34/RNF34_partitions/RNF34_group1.fasta	../firstrun/newGeneCopies/RNF34/RNF34_partitions/RNF34_group1_RNF34OOOANAPC5OOOKDM2B.fasta	RP11-711D18.2,RNF34,ANAPC5,KDM2B,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group7.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group7_RPS6KC1.fasta	RPS6KC1,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group6.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group6_RPS6KC1.fasta	RPS6KC1,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group25.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group25_RPS6KA2.fasta	RPS6KA2,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group5.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group5_RPS6KC1.fasta	RPS6KC1,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group26.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group26_RPS6KA2OOORP11-514O12v4.fasta	RP11-514O12.4,RPS6KA2,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group8.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group8_RPS6KC1.fasta	RPS6KC1,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group27.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group27_RPS6KA2OOORPS6KA2-AS1OOORNASET2.fasta	RP11-514O12.4,RPS6KA2-AS1,RPS6KA2,RNASET2,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group17.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group17_RPS6KA2OOORPS6KA2-IT1.fasta	RPS6KA2-IT1,RPS6KA2,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group20.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group20_RPS6KA2OOOC15orf40OOOHOMER2.fasta	HOMER2,RP11-382A20.5,RAMACL,C15orf40,RAMAC,RPS6KA2,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group21.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group21_RPS6KA2.fasta	RPS6KA2,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group19.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group19_RPS6KA2OOOMIR1913.fasta	MIR1913,RPS6KA2,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group22.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group22_RPS6KA2.fasta	RPS6KA2,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group35.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group35_RPS6KB2OOORPS6KB2-AS1OOOCARNS1.fasta	CORO1B,RPS6KB2,RPS6KB2-AS1,CARNS1,PTPRCAP,
../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group23.fasta	../firstrun/newGeneCopies/RPS6K/RPS6K_partitions/RPS6K_group23_RPS6KA2.fasta	RPS6KA2,
../firstrun/newGeneCopies/CORO1/CORO1_partitions/CORO1_group5.fasta	../firstrun/newGeneCopies/CORO1/CORO1_partitions/CORO1_group5_CORO1AOOOCORO1A-AS1OOOBOLA2.fasta	SLX1B-SULT1A4,BOLA2,CORO1A-AS1,RP11-345J4.6,CORO1A,SLX1B,BOLA2-SMG1P6,RP11-345J4.11,SMG1P6,
../firstrun/newGeneCopies/CORO1/CORO1_partitions/CORO1_group1.fasta	../firstrun/newGeneCopies/CORO1/CORO1_partitions/CORO1_group1_CORO1BOOOPTPRCAPOOORPS6KB2.fasta	CORO1B,RPS6KB2-AS1,PTPRCAP,RPS6KB2,
../firstrun/newGeneCopies/GYPB/GYPB_partitions/GYPB_group1.fasta	../firstrun/newGeneCopies/GYPB/GYPB_partitions/GYPB_group1_GYPBOOOGYPAOOOGYPE.fasta	GYPB,RP11-673E1.1,RP11-673E1.5,GYPA,GYPE,RP11-1289C17.1,
../firstrun/newGeneCopies/CNNM3/CNNM3_partitions/CNNM3_group1.fasta	../firstrun/newGeneCopies/CNNM3/CNNM3_partitions/CNNM3_group1_CNNM3OOOCNNM3-DTOOOANKRD23.fasta	CNNM3,ANKRD39,ANKRD23,CNNM3-DT,CNNM4,
../firstrun/newGeneCopies/CHST14/CHST14_partitions/CHST14_group1.fasta	../firstrun/newGeneCopies/CHST14/CHST14_partitions/CHST14_group1_CHST14OOOBAHD1OOORP11-64K12v8.fasta	BAHD1,CHST14,RP11-64K12.8,
../firstrun/newGeneCopies/CROCC/CROCC_partitions/CROCC_group2.fasta	../firstrun/newGeneCopies/CROCC/CROCC_partitions/CROCC_group2_CROCCOOOCROCCP2OOOCROCCP3.fasta	RP1-163M9.8,RNU1-5P,PDE4DIPP9,RP11-108M9.5,CROCCP2,RP5-875O13.7,RP5-1135M2.1,RNVU1-18,RP11-108M9.1,RP4-798A10.7,RP11-108M9.3,MST1L,MIR3675,RP11-108M9.6,MFAP2,RP4-791M13.3,SEC22B4P,LINC01783,NBPF9,RP11-400F1.2,ENSG00000277475,RNU1-3,CROCCP3,NBPF25P,RP11-397A15.4,RNF123,RP5-1182A14.7,CROCCP4,RP11-403I13.5,RP4-798A10.8,RNVU1-29,RP4-704D21.2,RP11-108M9.4,PDE4DIP,MST1P2,CROCC,RNVU1-23,LINC01719,AC099668.5,KIF28P,RP5-1182A14.8,SATB1-AS1,NBPF8,RNVU1-2A,RNU1-4,CH17-353B19.2,RNU1-1,RNU1-2,RNVU1-28,NBPF1,EIF1AXP1,RNVU1-6,CH17-408M7.2,MST1,ENSG00000268674,RP5-1182A14.5,APEH,RNU1-6P,RP4-798A10.4,PDE4DIPP8,U1,LINC01772,
../firstrun/newGeneCopies/CENPM/CENPM_partitions/CENPM_group1.fasta	../firstrun/newGeneCopies/CENPM/CENPM_partitions/CENPM_group1_CENPM.fasta	CENPM,
../firstrun/newGeneCopies/RAB11B/RAB11B_partitions/RAB11B_group14.fasta	../firstrun/newGeneCopies/RAB11B/RAB11B_partitions/RAB11B_group14_RAB11BOOORAB11B-AS1OOOANGPTL4.fasta	RAB11B,RAB11B-AS1,ANGPTL4,MIR4999,
../firstrun/newGeneCopies/CT55/CT55_partitions/CT55_group1.fasta	../firstrun/newGeneCopies/CT55/CT55_partitions/CT55_group1_CT55OOORP13-210D15v1OOORP13-565O16v2.fasta	RP13-210D15.1,RP13-565O16.2,CT55,
../firstrun/newGeneCopies/TM9SF4/TM9SF4_partitions/TM9SF4_group2.fasta	../firstrun/newGeneCopies/TM9SF4/TM9SF4_partitions/TM9SF4_group2_TM9SF4OOORSL24D1P6.fasta	RSL24D1P6,TM9SF4,
../firstrun/newGeneCopies/TM9SF4/TM9SF4_partitions/TM9SF4_group1.fasta	../firstrun/newGeneCopies/TM9SF4/TM9SF4_partitions/TM9SF4_group1_TM9SF4OOORP5-836N17v4.fasta	RP5-836N17.4,TM9SF4,
../firstrun/newGeneCopies/DUSP15/DUSP15_partitions/DUSP15_group1.fasta	../firstrun/newGeneCopies/DUSP15/DUSP15_partitions/DUSP15_group1_DUSP15OOOFOXS1OOOTTLL9.fasta	DUSP15,TTLL9,FOXS1,
../firstrun/newGeneCopies/B3GNTL1/B3GNTL1_partitions/B3GNTL1_group3.fasta	../firstrun/newGeneCopies/B3GNTL1/B3GNTL1_partitions/B3GNTL1_group3_B3GNTL1OOORP11-1197K16v2OOOTBCD.fasta	B3GNTL1,TBCD,RP11-1197K16.2,
../firstrun/newGeneCopies/ERP29/ERP29_partitions/ERP29_group1.fasta	../firstrun/newGeneCopies/ERP29/ERP29_partitions/ERP29_group1_ERP29OOORP1-267L14v6OOOTMEM116.fasta	ERP29,RP1-267L14.6,TMEM116,
../firstrun/newGeneCopies/EYA3/EYA3_partitions/EYA3_group2.fasta	../firstrun/newGeneCopies/EYA3/EYA3_partitions/EYA3_group2_EYA3.fasta	EYA3,
../firstrun/newGeneCopies/EYA3/EYA3_partitions/EYA3_group1.fasta	../firstrun/newGeneCopies/EYA3/EYA3_partitions/EYA3_group1_EYA3OOORN7SL559POOORP11-460I13v6.fasta	EYA3,XKR8,RP11-460I13.6,RN7SL559P,
../firstrun/newGeneCopies/INTS1/INTS1_partitions/INTS1_group1.fasta	../firstrun/newGeneCopies/INTS1/INTS1_partitions/INTS1_group1_INTS1OOORP11-1246C19v1.fasta	RP11-1246C19.1,INTS1,
../firstrun/newGeneCopies/CDC14C/CDC14C_partitions/CDC14C_group10.fasta	../firstrun/newGeneCopies/CDC14C/CDC14C_partitions/CDC14C_group10_CDC14COOOAC004899v3OOORP4-815D20v1.fasta	AC004899.3,CDC14C,RP4-815D20.1,
../firstrun/newGeneCopies/MYO19/MYO19_partitions/MYO19_group1.fasta	../firstrun/newGeneCopies/MYO19/MYO19_partitions/MYO19_group1_MYO19OOO5S_rRNAOOOGGNBP2.fasta	MYO19,RNA5SP439,PIGW,5S_rRNA,ZNHIT3,GGNBP2,
../firstrun/newGeneCopies/ROGDI/ROGDI_partitions/ROGDI_group1.fasta	../firstrun/newGeneCopies/ROGDI/ROGDI_partitions/ROGDI_group1_ROGDIOOOGLYR1OOORP11-127I20v5.fasta	ROGDI,RP11-127I20.9,GLYR1,SMIM22,RP11-127I20.5,
../firstrun/newGeneCopies/RIMBP3/RIMBP3_partitions/RIMBP3_group1.fasta	../firstrun/newGeneCopies/RIMBP3/RIMBP3_partitions/RIMBP3_group1_RIMBP3OOORIMBP3BOOORIMBP3C.fasta	RIMBP3C,ENSG10010139483.1,RN7SKP63,ENSG10010137394.1,UBE2L3,ENSG10010139266.1,RIMBP3,RN7SKP131,RN7SKP221,Metazoa_SRP,RIMBP3B,
../firstrun/newGeneCopies/CHMP2/CHMP2_partitions/CHMP2_group2.fasta	../firstrun/newGeneCopies/CHMP2/CHMP2_partitions/CHMP2_group2_CHMP2AOOOMIR6807OOOMZF1-AS1.fasta	CHMP2A,MZF1-AS1,MIR6807,UBE2M,TRIM28,
../firstrun/newGeneCopies/CHMP2/CHMP2_partitions/CHMP2_group1.fasta	../firstrun/newGeneCopies/CHMP2/CHMP2_partitions/CHMP2_group1_CHMP2BOOOMIR4795.fasta	MIR4795,CHMP2B,
../firstrun/newGeneCopies/DPF1/DPF1_partitions/DPF1_group1.fasta	../firstrun/newGeneCopies/DPF1/DPF1_partitions/DPF1_group1_DPF1OOOSIPA1L3.fasta	SIPA1L3,DPF1,
../firstrun/newGeneCopies/ZNF595/ZNF595_partitions/ZNF595_group1.fasta	../firstrun/newGeneCopies/ZNF595/ZNF595_partitions/ZNF595_group1_ZNF595.fasta	ZNF595,
../firstrun/newGeneCopies/DEFB123/DEFB123_partitions/DEFB123_group1.fasta	../firstrun/newGeneCopies/DEFB123/DEFB123_partitions/DEFB123_group1_DEFB123.fasta	DEFB123,
../firstrun/newGeneCopies/PRAP1/PRAP1_partitions/PRAP1_group1.fasta	../firstrun/newGeneCopies/PRAP1/PRAP1_partitions/PRAP1_group1_PRAP1OOOZNF511-PRAP1OOOBANF1P2.fasta	PRAP1,BANF1P2,FUOM,ZNF511-PRAP1,RP11-122K13.7,
../firstrun/newGeneCopies/TRAF2/TRAF2_partitions/TRAF2_group1.fasta	../firstrun/newGeneCopies/TRAF2/TRAF2_partitions/TRAF2_group1_TRAF2OOOMIR4479.fasta	TRAF2,MIR4479,
../firstrun/newGeneCopies/ANKRD34A/ANKRD34A_partitions/ANKRD34A_group1.fasta	../firstrun/newGeneCopies/ANKRD34A/ANKRD34A_partitions/ANKRD34A_group1_ANKRD34AOOOCH17-270A2v1OOOCH17-270A2v2.fasta	LIX1L,CH17-270A2.2,CH17-270A2.1,ANKRD34A,LIX1L-AS1,POLR3GL,
../firstrun/newGeneCopies/CTAG2/CTAG2_partitions/CTAG2_group1.fasta	../firstrun/newGeneCopies/CTAG2/CTAG2_partitions/CTAG2_group1_CTAG2OOOAF277315v13OOOATF4P1.fasta	OR3B1P,CTAG1A,CTAG1B,ATF4P1,ATF4P2,AF277315.13,CTAG2,IKBKGP1,RP5-865E18.2,
../firstrun/newGeneCopies/CUEDC2/CUEDC2_partitions/CUEDC2_group1.fasta	../firstrun/newGeneCopies/CUEDC2/CUEDC2_partitions/CUEDC2_group1_CUEDC2OOOFBXL15OOOPSD.fasta	FBXL15,PSD,CUEDC2,
../firstrun/newGeneCopies/CHCHD2/CHCHD2_partitions/CHCHD2_group6.fasta	../firstrun/newGeneCopies/CHCHD2/CHCHD2_partitions/CHCHD2_group6_CHCHD2.fasta	CHCHD2,
../firstrun/newGeneCopies/RP11-724O16.1/RP11-724O16.1_partitions/RP11-724O16.1_group1.fasta	../firstrun/newGeneCopies/RP11-724O16.1/RP11-724O16.1_partitions/RP11-724O16.1_group1_RP11-724O16v1OOOBBS5OOOFASTKD1.fasta	FASTKD1,KLHL41,RP11-724O16.1,BBS5,
../firstrun/newGeneCopies/MRPL55/MRPL55_partitions/MRPL55_group1.fasta	../firstrun/newGeneCopies/MRPL55/MRPL55_partitions/MRPL55_group1_MRPL55OOOC1orf35OOOFAM96AP2.fasta	FAM96AP2,C1orf35,MRPL55,
../firstrun/newGeneCopies/TMEM94/TMEM94_partitions/TMEM94_group1.fasta	../firstrun/newGeneCopies/TMEM94/TMEM94_partitions/TMEM94_group1_TMEM94OOOCASKIN2OOOMIR6785.fasta	Y_RNA,MIR6785,CASKIN2,TMEM94,
../firstrun/newGeneCopies/CALML5/CALML5_partitions/CALML5_group1.fasta	../firstrun/newGeneCopies/CALML5/CALML5_partitions/CALML5_group1_CALML5.fasta	CALML5,
../firstrun/newGeneCopies/GGNBP2/GGNBP2_partitions/GGNBP2_group1.fasta	../firstrun/newGeneCopies/GGNBP2/GGNBP2_partitions/GGNBP2_group1_GGNBP2OOOCTB-75G16v1OOODHRS11.fasta	DHRS11,CTB-75G16.1,GGNBP2,MYO19,
../firstrun/newGeneCopies/KCTD5/KCTD5_partitions/KCTD5_group2.fasta	../firstrun/newGeneCopies/KCTD5/KCTD5_partitions/KCTD5_group2_KCTD5OOOAC141586v5OOOCTD-2270P14v2.fasta	ERVK13-1,CTD-2270P14.2,AC141586.5,PDPK1,KCTD5,
../firstrun/newGeneCopies/HLA-DRB/HLA-DRB_partitions/HLA-DRB_group79.fasta	../firstrun/newGeneCopies/HLA-DRB/HLA-DRB_partitions/HLA-DRB_group79_HLA-DRB8OOOU1.fasta	U1,HLA-DRB8,
../firstrun/newGeneCopies/HLA-DRB/HLA-DRB_partitions/HLA-DRB_group23.fasta	../firstrun/newGeneCopies/HLA-DRB/HLA-DRB_partitions/HLA-DRB_group23_HLA-DRB1OOOHLA-DRB2OOOHLA-DRB3.fasta	DASS-23B5.1,FAM8A5P,DASS-23B5.2,U1,HLA-DRB1,HLA-DRB3,HLA-DRB5,DASS-397D15.4,HLA-DRB6,RNU1-79P,HLA-DRB2,RNU1-116P,RNU1-61P,HLA-DRB7,DASS-397D15.5,HLA-DRB4,HLA-DRB9,
../firstrun/newGeneCopies/NUMA1/NUMA1_partitions/NUMA1_group1.fasta	../firstrun/newGeneCopies/NUMA1/NUMA1_partitions/NUMA1_group1_NUMA1OOOIL18BPOOOLRTOMT.fasta	RNU6-72P,LRTOMT,RP11-849H4.4,RP11-807H22.10,IL18BP,NUMA1,MIR3165,
../firstrun/newGeneCopies/TUBB3/TUBB3_partitions/TUBB3_group5.fasta	../firstrun/newGeneCopies/TUBB3/TUBB3_partitions/TUBB3_group5_TUBB3OOOMC1ROOORP11-566K11v2.fasta	RP11-566K11.2,TUBB3,RP11-566K11.4,MC1R,
../firstrun/newGeneCopies/ANXA4/ANXA4_partitions/ANXA4_group3.fasta	../firstrun/newGeneCopies/ANXA4/ANXA4_partitions/ANXA4_group3_ANXA4OOOGMCL1.fasta	GMCL1,ANXA4,
../firstrun/newGeneCopies/ANXA4/ANXA4_partitions/ANXA4_group2.fasta	../firstrun/newGeneCopies/ANXA4/ANXA4_partitions/ANXA4_group2_ANXA4.fasta	ANXA4,
../firstrun/newGeneCopies/ANXA4/ANXA4_partitions/ANXA4_group1.fasta	../firstrun/newGeneCopies/ANXA4/ANXA4_partitions/ANXA4_group1_ANXA4OOOAAK1.fasta	ANXA4,AAK1,
../firstrun/newGeneCopies/RP3-468K18.7/RP3-468K18.7_partitions/RP3-468K18.7_group1.fasta	../firstrun/newGeneCopies/RP3-468K18.7/RP3-468K18.7_partitions/RP3-468K18.7_group1_RP3-468K18v7OOOLTV1OOORP3-468K18v6.fasta	RP3-468K18.6,LTV1,ZC2HC1B,RP3-468K18.7,
../firstrun/newGeneCopies/RP3-468K18.7/RP3-468K18.7_partitions/RP3-468K18.7_group3.fasta	../firstrun/newGeneCopies/RP3-468K18.7/RP3-468K18.7_partitions/RP3-468K18.7_group3_RP3-468K18v7OOOPLAGL1OOOZC2HC1B.fasta	PLAGL1,ZC2HC1B,RP3-468K18.7,
../firstrun/newGeneCopies/BDH1/BDH1_partitions/BDH1_group1.fasta	../firstrun/newGeneCopies/BDH1/BDH1_partitions/BDH1_group1_BDH1OOOLINC02012.fasta	LINC02012,BDH1,
../firstrun/newGeneCopies/GPATCH2L/GPATCH2L_partitions/GPATCH2L_group1.fasta	../firstrun/newGeneCopies/GPATCH2L/GPATCH2L_partitions/GPATCH2L_group1_GPATCH2LOOORP11-361H10v3OOORP11-361H10v7.fasta	GPATCH2L,RP11-361H10.3,RP11-361H10.7,
../firstrun/newGeneCopies/SPCS1/SPCS1_partitions/SPCS1_group1.fasta	../firstrun/newGeneCopies/SPCS1/SPCS1_partitions/SPCS1_group1_SPCS1OOOGLT8D1OOONEK4.fasta	SPCS1,GLT8D1,NEK4,
../firstrun/newGeneCopies/C8orf/C8orf_partitions/C8orf_group85.fasta	../firstrun/newGeneCopies/C8orf/C8orf_partitions/C8orf_group85_C8orf74OOORNA5SP252OOORP1L1.fasta	C8orf74,RNA5SP252,RP1L1,
../firstrun/newGeneCopies/C8orf/C8orf_partitions/C8orf_group127.fasta	../firstrun/newGeneCopies/C8orf/C8orf_partitions/C8orf_group127_C8orf33OOOAC139103v1.fasta	AC139103.1,C8orf33,
../firstrun/newGeneCopies/C8orf/C8orf_partitions/C8orf_group88.fasta	../firstrun/newGeneCopies/C8orf/C8orf_partitions/C8orf_group88_C8orf58OOOAC037459v4OOOCCAR2.fasta	PDLIM2,CCAR2,AC037459.4,C8orf58,
../firstrun/newGeneCopies/SERF1/SERF1_partitions/SERF1_group2.fasta	../firstrun/newGeneCopies/SERF1/SERF1_partitions/SERF1_group2_SERF1AOOOSERF1BOOOCDH12.fasta	SMN1,SERF1B,SMN2,CDH12,SERF1A,
../firstrun/newGeneCopies/ZSCAN2/ZSCAN2_partitions/ZSCAN2_group1.fasta	../firstrun/newGeneCopies/ZSCAN2/ZSCAN2_partitions/ZSCAN2_group1_ZSCAN2OOORP11-182J1v18OOORP11-182J1v3.fasta	ZSCAN2,RP11-182J1.5,RP11-182J1.18,RP11-182J1.3,
../firstrun/newGeneCopies/IGHG1/IGHG1_partitions/IGHG1_group1.fasta	../firstrun/newGeneCopies/IGHG1/IGHG1_partitions/IGHG1_group1_IGHG1OOOCOPDA1OOOELK2AP.fasta	IGHG3,IGHGP,MIR8071-2,IGHG2,ELK2AP,MIR8071-1,COPDA1,IGHG4,IGHG1,
../firstrun/newGeneCopies/ZNF540/ZNF540_partitions/ZNF540_group2.fasta	../firstrun/newGeneCopies/ZNF540/ZNF540_partitions/ZNF540_group2_ZNF540OOOCTD-3064H18v4OOOZFP30.fasta	ZNF793,ZNF540,ZFP30,CTD-3064H18.4,ZNF571-AS1,ZNF571,
../firstrun/newGeneCopies/IDI1/IDI1_partitions/IDI1_group3.fasta	../firstrun/newGeneCopies/IDI1/IDI1_partitions/IDI1_group3_IDI1OOOIDI2-AS1OOOWDR37.fasta	IDI1,WDR37,IDI2-AS1,
../firstrun/newGeneCopies/FLAD1/FLAD1_partitions/FLAD1_group1.fasta	../firstrun/newGeneCopies/FLAD1/FLAD1_partitions/FLAD1_group1_FLAD1OOOLENEP.fasta	FLAD1,LENEP,
../firstrun/newGeneCopies/SCCPDH/SCCPDH_partitions/SCCPDH_group1.fasta	../firstrun/newGeneCopies/SCCPDH/SCCPDH_partitions/SCCPDH_group1_SCCPDHOOORPL35AP6.fasta	RPL35AP6,SCCPDH,
../firstrun/newGeneCopies/ADSS2/ADSS2_partitions/ADSS2_group1.fasta	../firstrun/newGeneCopies/ADSS2/ADSS2_partitions/ADSS2_group1_ADSS2OOOCATSPEREOOORP11-518L10v5.fasta	RP11-518L10.5,CATSPERE,ADSS2,
../firstrun/newGeneCopies/CYB5R3/CYB5R3_partitions/CYB5R3_group1.fasta	../firstrun/newGeneCopies/CYB5R3/CYB5R3_partitions/CYB5R3_group1_CYB5R3OOOATP5MGLOOOPOLDIP3.fasta	CYB5R3,POLDIP3,RNU12,ATP5MGL,
../firstrun/newGeneCopies/GSK3/GSK3_partitions/GSK3_group1.fasta	../firstrun/newGeneCopies/GSK3/GSK3_partitions/GSK3_group1_GSK3BOOONR1I2.fasta	GSK3B,NR1I2,
../firstrun/newGeneCopies/GSK3/GSK3_partitions/GSK3_group2.fasta	../firstrun/newGeneCopies/GSK3/GSK3_partitions/GSK3_group2_GSK3B.fasta	GSK3B,
../firstrun/newGeneCopies/GSK3/GSK3_partitions/GSK3_group3.fasta	../firstrun/newGeneCopies/GSK3/GSK3_partitions/GSK3_group3_GSK3BOOORP11-18H7v1OOORP11-73F12v1.fasta	RP11-18H7.1,RP11-73F12.2,RP11-73F12.1,GSK3B,
../firstrun/newGeneCopies/GSK3/GSK3_partitions/GSK3_group5.fasta	../firstrun/newGeneCopies/GSK3/GSK3_partitions/GSK3_group5_GSK3AOOOAC006486v10OOOAC006486v14.fasta	AC006486.9,AC006486.10,ZNF526,GSK3A,AC006486.14,
../firstrun/newGeneCopies/TMOD4/TMOD4_partitions/TMOD4_group1.fasta	../firstrun/newGeneCopies/TMOD4/TMOD4_partitions/TMOD4_group1_TMOD4OOOLYSMD1OOOSCNM1.fasta	SCNM1,LYSMD1,TMOD4,VPS72,
../firstrun/newGeneCopies/SLC10A3/SLC10A3_partitions/SLC10A3_group1.fasta	../firstrun/newGeneCopies/SLC10A3/SLC10A3_partitions/SLC10A3_group1_SLC10A3OOORN7SL697POOOUBL4A.fasta	UBL4A,SLC10A3,RN7SL697P,
../firstrun/newGeneCopies/ACP5/ACP5_partitions/ACP5_group1.fasta	../firstrun/newGeneCopies/ACP5/ACP5_partitions/ACP5_group1_ACP5OOOZNF627.fasta	ACP5,ZNF627,
../firstrun/newGeneCopies/SCYL1/SCYL1_partitions/SCYL1_group1.fasta	../firstrun/newGeneCopies/SCYL1/SCYL1_partitions/SCYL1_group1_SCYL1OOOLTBP3.fasta	SCYL1,LTBP3,
../firstrun/newGeneCopies/EPS8/EPS8_partitions/EPS8_group1.fasta	../firstrun/newGeneCopies/EPS8/EPS8_partitions/EPS8_group1_EPS8L3OOOGSTM5OOORP4-735C1v4.fasta	RP4-735C1.4,GSTM5,EPS8L3,
../firstrun/newGeneCopies/PLXNA3/PLXNA3_partitions/PLXNA3_group1.fasta	../firstrun/newGeneCopies/PLXNA3/PLXNA3_partitions/PLXNA3_group1_PLXNA3OOOLAGE3.fasta	LAGE3,PLXNA3,
../firstrun/newGeneCopies/MICA/MICA_partitions/MICA_group3.fasta	../firstrun/newGeneCopies/MICA/MICA_partitions/MICA_group3_MICAOOOMICBOOOMICB-DT.fasta	MICA,Y_RNA,MICB-DT,XXbac-BPG181B23.7,XXbac-BPG181B23.9,XXbac-BPG16N22.5,MICB,
../firstrun/newGeneCopies/MICA/MICA_partitions/MICA_group14.fasta	../firstrun/newGeneCopies/MICA/MICA_partitions/MICA_group14_MICAL3.fasta	MICAL3,
../firstrun/newGeneCopies/MICA/MICA_partitions/MICA_group15.fasta	../firstrun/newGeneCopies/MICA/MICA_partitions/MICA_group15_MICAL3OOOMIR648OOORHEBP3.fasta	MICAL3,RHEBP3,XXbac-B476C20.13,XXbac-B476C20.14,MIR648,
../firstrun/newGeneCopies/MICA/MICA_partitions/MICA_group6.fasta	../firstrun/newGeneCopies/MICA/MICA_partitions/MICA_group6_MICALL2OOOAC102953v4.fasta	MICALL2,AC102953.4,
../firstrun/newGeneCopies/MICA/MICA_partitions/MICA_group13.fasta	../firstrun/newGeneCopies/MICA/MICA_partitions/MICA_group13_MICAL3OOOXXbac-B461K10v4OOOXXbac-B461K10v9.fasta	XXbac-B461K10.9,MICAL3,XXbac-B461K10.4,
../firstrun/newGeneCopies/NXNL2/NXNL2_partitions/NXNL2_group1.fasta	../firstrun/newGeneCopies/NXNL2/NXNL2_partitions/NXNL2_group1_NXNL2.fasta	NXNL2,
../firstrun/newGeneCopies/NXNL2/NXNL2_partitions/NXNL2_group2.fasta	../firstrun/newGeneCopies/NXNL2/NXNL2_partitions/NXNL2_group2_NXNL2.fasta	NXNL2,
../firstrun/newGeneCopies/AGL/AGL_partitions/AGL_group1.fasta	../firstrun/newGeneCopies/AGL/AGL_partitions/AGL_group1_AGL.fasta	AGL,
../firstrun/newGeneCopies/SNRPC/SNRPC_partitions/SNRPC_group9.fasta	../firstrun/newGeneCopies/SNRPC/SNRPC_partitions/SNRPC_group9_SNRPC.fasta	SNRPC,
../firstrun/newGeneCopies/CDK7/CDK7_partitions/CDK7_group2.fasta	../firstrun/newGeneCopies/CDK7/CDK7_partitions/CDK7_group2_CDK7OOOCCDC125.fasta	CCDC125,CDK7,
../firstrun/newGeneCopies/PROKR1/PROKR1_partitions/PROKR1_group1.fasta	../firstrun/newGeneCopies/PROKR1/PROKR1_partitions/PROKR1_group1_PROKR1OOOAPLF.fasta	PROKR1,APLF,
../firstrun/newGeneCopies/RPL10A/RPL10A_partitions/RPL10A_group5.fasta	../firstrun/newGeneCopies/RPL10A/RPL10A_partitions/RPL10A_group5_RPL10AOOOFANCEOOOMIR7111.fasta	TEAD3,FANCE,RPL10A,MIR7111,
../firstrun/newGeneCopies/ZNF765/ZNF765_partitions/ZNF765_group15.fasta	../firstrun/newGeneCopies/ZNF765/ZNF765_partitions/ZNF765_group15_ZNF765OOOCTB-167G5v7OOOCTD-2224J9v11.fasta	RPL39P36,CTD-2224J9.4,ZNF331,CTD-2224J9.11,TPM3P9,ZNF813,CTD-2224J9.8,ZNF765,CTD-2224J9.7,ZNF525,ZNF761,TPM3P6,CTB-167G5.7,CTD-3141N22.1,
../firstrun/newGeneCopies/MTLN/MTLN_partitions/MTLN_group1.fasta	../firstrun/newGeneCopies/MTLN/MTLN_partitions/MTLN_group1_MTLNOOOAC013271v3OOOAC013271v5.fasta	AC013271.3,RP13-1039J1.4,RP11-1223D19.1,MTLN,AC108938.5,AC013271.7,AC013271.5,RP11-1223D19.3,RP13-1039J1.2,
../firstrun/newGeneCopies/NINL/NINL_partitions/NINL_group1.fasta	../firstrun/newGeneCopies/NINL/NINL_partitions/NINL_group1_NINLOOOGINS1.fasta	GINS1,NINL,
../firstrun/newGeneCopies/SLC30A/SLC30A_partitions/SLC30A_group18.fasta	../firstrun/newGeneCopies/SLC30A/SLC30A_partitions/SLC30A_group18_SLC30A5OOOCTC-498J12v3.fasta	SLC30A5,CTC-498J12.3,
../firstrun/newGeneCopies/SLC30A/SLC30A_partitions/SLC30A_group19.fasta	../firstrun/newGeneCopies/SLC30A/SLC30A_partitions/SLC30A_group19_SLC30A8OOOAARDOOORN7SL228P.fasta	SLC30A8,AARD,RN7SL228P,RP11-1059L18.1,
../firstrun/newGeneCopies/SLC30A/SLC30A_partitions/SLC30A_group22.fasta	../firstrun/newGeneCopies/SLC30A/SLC30A_partitions/SLC30A_group22_SLC30A8OOORN7SL826POOORP11-654G14v1.fasta	RP11-654G14.1,SLC30A8,RN7SL826P,
../firstrun/newGeneCopies/PEDS1/PEDS1_partitions/PEDS1_group2.fasta	../firstrun/newGeneCopies/PEDS1/PEDS1_partitions/PEDS1_group2_PEDS1OOOPEDS1-UBE2V1OOOUBE2V1.fasta	PEDS1,UBE2V1,PEDS1-UBE2V1,
../firstrun/newGeneCopies/TRABD2A/TRABD2A_partitions/TRABD2A_group2.fasta	../firstrun/newGeneCopies/TRABD2A/TRABD2A_partitions/TRABD2A_group2_TRABD2AOOORPL12P18OOOTMSB10.fasta	RPL12P18,TRABD2A,TMSB10,
../firstrun/newGeneCopies/TRABD2A/TRABD2A_partitions/TRABD2A_group1.fasta	../firstrun/newGeneCopies/TRABD2A/TRABD2A_partitions/TRABD2A_group1_TRABD2AOOODNAH6OOORP11-241M13v2.fasta	DNAH6,RP11-241M13.2,TRABD2A,
../firstrun/newGeneCopies/UAP1L1/UAP1L1_partitions/UAP1L1_group1.fasta	../firstrun/newGeneCopies/UAP1L1/UAP1L1_partitions/UAP1L1_group1_UAP1L1OOOMAN1B1OOOMAN1B1-DT.fasta	MAN1B1-DT,UAP1L1,MAN1B1,
../firstrun/newGeneCopies/PLTP/PLTP_partitions/PLTP_group1.fasta	../firstrun/newGeneCopies/PLTP/PLTP_partitions/PLTP_group1_PLTPOOOCTSA.fasta	PLTP,CTSA,
../firstrun/newGeneCopies/ST3GAL2/ST3GAL2_partitions/ST3GAL2_group2.fasta	../firstrun/newGeneCopies/ST3GAL2/ST3GAL2_partitions/ST3GAL2_group2_ST3GAL2OOORNU6-23POOORPS27P26.fasta	RPS27P26,RNU6-23P,ST3GAL2,
../firstrun/newGeneCopies/ST3GAL2/ST3GAL2_partitions/ST3GAL2_group1.fasta	../firstrun/newGeneCopies/ST3GAL2/ST3GAL2_partitions/ST3GAL2_group1_ST3GAL2OOODDX19AOOORP11-529K1v4.fasta	RP11-529K1.4,ST3GAL2,DDX19A,
../firstrun/newGeneCopies/TRIM66/TRIM66_partitions/TRIM66_group1.fasta	../firstrun/newGeneCopies/TRIM66/TRIM66_partitions/TRIM66_group1_TRIM66OOORP11-152H18v4OOORPL27A.fasta	SNORA3B,RP11-152H18.4,TRIM66,SNORA3A,RPL27A,
../firstrun/newGeneCopies/RP11-402P6.15/RP11-402P6.15_partitions/RP11-402P6.15_group1.fasta	../firstrun/newGeneCopies/RP11-402P6.15/RP11-402P6.15_partitions/RP11-402P6.15_group1_RP11-402P6v15OOOCXorf49OOOCXorf49B.fasta	RP11-402P6.12,CXorf49,RP11-402P6.13,CXorf49B,RP11-402P6.15,RP11-402P6.9,
../firstrun/newGeneCopies/RP11-298I3.5/RP11-298I3.5_partitions/RP11-298I3.5_group1.fasta	../firstrun/newGeneCopies/RP11-298I3.5/RP11-298I3.5_partitions/RP11-298I3.5_group1_RP11-298I3v5OOOAJUBAOOOHAUS4.fasta	RP11-298I3.5,AJUBA,RP11-298I3.1,MIR4707,HAUS4,RP11-298I3.4,
../firstrun/newGeneCopies/ZNF141/ZNF141_partitions/ZNF141_group6.fasta	../firstrun/newGeneCopies/ZNF141/ZNF141_partitions/ZNF141_group6_ZNF141OOOMIR571OOORP11-2H3v7.fasta	RP11-478C6.1,ZNF141,RP11-478C6.7,RP11-2H3.7,ZNF519P4,ZNF721,RP11-478C6.2,MIR571,RP11-478C6.4,
../firstrun/newGeneCopies/CAMKK2/CAMKK2_partitions/CAMKK2_group9.fasta	../firstrun/newGeneCopies/CAMKK2/CAMKK2_partitions/CAMKK2_group9_CAMKK2.fasta	CAMKK2,
../firstrun/newGeneCopies/FITM2/FITM2_partitions/FITM2_group1.fasta	../firstrun/newGeneCopies/FITM2/FITM2_partitions/FITM2_group1_FITM2.fasta	FITM2,
../firstrun/newGeneCopies/GGT5/GGT5_partitions/GGT5_group1.fasta	../firstrun/newGeneCopies/GGT5/GGT5_partitions/GGT5_group1_GGT5OOOBCRP3OOOBCRP4.fasta	GGT1,GGTLC2,KB-1995A5.6,IGLV3-30,FAM247B,BCRP4,BCRP3,RP11-341D18.9,GGT5,FAM247A,GGT4P,CH17-420I24.1,GGT2,GGTLC5P,GGTLC4P,POM121L1P,RP5-831C21.1,GGTLC3,GGTLC1,GGT3P,KB-1995A5.4,
../firstrun/newGeneCopies/YTHDF1/YTHDF1_partitions/YTHDF1_group2.fasta	../firstrun/newGeneCopies/YTHDF1/YTHDF1_partitions/YTHDF1_group2_YTHDF1OOORP5-963E22v6.fasta	YTHDF1,RP5-963E22.6,
../firstrun/newGeneCopies/ZGPAT/ZGPAT_partitions/ZGPAT_group1.fasta	../firstrun/newGeneCopies/ZGPAT/ZGPAT_partitions/ZGPAT_group1_ZGPATOOOARFRP1OOOLIME1.fasta	ZGPAT,RP4-583P15.14,RP4-583P15.15,LIME1,RP4-583P15.16,ARFRP1,
../firstrun/newGeneCopies/ORM/ORM_partitions/ORM_group2.fasta	../firstrun/newGeneCopies/ORM/ORM_partitions/ORM_group2_ORM1OOOORM2OOOAKNA.fasta	ORM2,AKNA,ORM1,
../firstrun/newGeneCopies/CH17-270A2.2/CH17-270A2.2_partitions/CH17-270A2.2_group1.fasta	../firstrun/newGeneCopies/CH17-270A2.2/CH17-270A2.2_partitions/CH17-270A2.2_group1_CH17-270A2v2OOOANKRD34AOOOC14orf39.fasta	C14orf39,POLR3GL,RBM8B,LIX1L,LIX1L-AS1,ANKRD34A,CH17-270A2.1,GNRHR2P1,GNRHR2,RBM8A,CH17-270A2.2,
../firstrun/newGeneCopies/SPATA18/SPATA18_partitions/SPATA18_group1.fasta	../firstrun/newGeneCopies/SPATA18/SPATA18_partitions/SPATA18_group1_SPATA18.fasta	SPATA18,
../firstrun/newGeneCopies/IMPDH1/IMPDH1_partitions/IMPDH1_group5.fasta	../firstrun/newGeneCopies/IMPDH1/IMPDH1_partitions/IMPDH1_group5_IMPDH1.fasta	IMPDH1,
../firstrun/newGeneCopies/KDM2/KDM2_partitions/KDM2_group4.fasta	../firstrun/newGeneCopies/KDM2/KDM2_partitions/KDM2_group4_KDM2BOOOKDM2B-DTOOOMIR7107.fasta	RNU6-1004P,KDM2B,RNF34,MIR7107,KDM2B-DT,
../firstrun/newGeneCopies/KDM2/KDM2_partitions/KDM2_group3.fasta	../firstrun/newGeneCopies/KDM2/KDM2_partitions/KDM2_group3_KDM2AOOORP11-157K17v5OOORP11-157K17v7.fasta	RP11-157K17.5,RP11-157K17.7,KDM2A,
../firstrun/newGeneCopies/KDM2/KDM2_partitions/KDM2_group1.fasta	../firstrun/newGeneCopies/KDM2/KDM2_partitions/KDM2_group1_KDM2A.fasta	KDM2A,
../firstrun/newGeneCopies/RP11-229P13.28/RP11-229P13.28_partitions/RP11-229P13.28_group1.fasta	../firstrun/newGeneCopies/RP11-229P13.28/RP11-229P13.28_partitions/RP11-229P13.28_group1_RP11-229P13v28OOOLCNL1OOOPTGDS.fasta	PTGDS,RP11-229P13.28,LCNL1,
../firstrun/newGeneCopies/CTAG1/CTAG1_partitions/CTAG1_group1.fasta	../firstrun/newGeneCopies/CTAG1/CTAG1_partitions/CTAG1_group1_CTAG1AOOOCTAG1BOOOAF277315v13.fasta	RP5-865E18.2,ATF4P2,CTAG2,IKBKGP1,OR3B1P,CTAG1B,ATF4P1,AF277315.13,CTAG1A,
../firstrun/newGeneCopies/CYHR1/CYHR1_partitions/CYHR1_group1.fasta	../firstrun/newGeneCopies/CYHR1/CYHR1_partitions/CYHR1_group1_CYHR1OOOCTD-2517M22v16OOOKIFC2.fasta	CYHR1,CTD-2517M22.16,KIFC2,
../firstrun/newGeneCopies/LINGO4/LINGO4_partitions/LINGO4_group1.fasta	../firstrun/newGeneCopies/LINGO4/LINGO4_partitions/LINGO4_group1_LINGO4OOORORCOOORP11-98D18v17.fasta	RORC,RP11-98D18.17,LINGO4,
../firstrun/newGeneCopies/RP11-69H14.10/RP11-69H14.10_partitions/RP11-69H14.10_group5.fasta	../firstrun/newGeneCopies/RP11-69H14.10/RP11-69H14.10_partitions/RP11-69H14.10_group5_RP11-69H14v10OOOENSG00000274792OOOENSG00000275249.fasta	OR4N4C,ENSG00000274792,OR11K2P,OR4N1P,OR4H6P,OR4Q3,LINC02203,OR4N2,RP11-69H14.10,OR4H12P,RP11-983G14.2,OR4Q1P,OR1Q1BP,ENSG00000275249,OR4H6BP,OR4M1,RP11-69H14.6,OR4M2,ENSG00000288469,ENSG00000288193,OR11K1P,OR4M2B,OR4N4,OR11K1BP,
../firstrun/newGeneCopies/CD1E/CD1E_partitions/CD1E_group3.fasta	../firstrun/newGeneCopies/CD1E/CD1E_partitions/CD1E_group3_CD1E.fasta	CD1E,
../firstrun/newGeneCopies/GPRIN2/GPRIN2_partitions/GPRIN2_group1.fasta	../firstrun/newGeneCopies/GPRIN2/GPRIN2_partitions/GPRIN2_group1_GPRIN2OOOENSG00000288457.fasta	GPRIN2,ENSG00000288457,
../firstrun/newGeneCopies/FCGR2/FCGR2_partitions/FCGR2_group1.fasta	../firstrun/newGeneCopies/FCGR2/FCGR2_partitions/FCGR2_group1_FCGR2AOOOFCGR2BOOOFCGR2C.fasta	HSPA7,HSPA6,FCGR2C,RP11-25K21.1,FCGR2A,RP11-25K21.6,FCGR2B,
../firstrun/newGeneCopies/MRPL21/MRPL21_partitions/MRPL21_group1.fasta	../firstrun/newGeneCopies/MRPL21/MRPL21_partitions/MRPL21_group1_MRPL21OOOIGHMBP2.fasta	MRPL21,IGHMBP2,
../firstrun/newGeneCopies/LINC02218/LINC02218_partitions/LINC02218_group1.fasta	../firstrun/newGeneCopies/LINC02218/LINC02218_partitions/LINC02218_group1_LINC02218OOOLINC02217.fasta	LINC02218,LINC02217,
../firstrun/newGeneCopies/PPP1R3B/PPP1R3B_partitions/PPP1R3B_group1.fasta	../firstrun/newGeneCopies/PPP1R3B/PPP1R3B_partitions/PPP1R3B_group1_PPP1R3BOOOENSG00000285236OOORP11-10A14v3.fasta	ENSG00000285236,RP11-115J16.1,PPP1R3B,RP11-10A14.3,
../firstrun/newGeneCopies/XPO6/XPO6_partitions/XPO6_group1.fasta	../firstrun/newGeneCopies/XPO6/XPO6_partitions/XPO6_group1_XPO6OOOENSG10010137450v1OOORNY1P10.fasta	TPRKBP2,XPO6,ENSG10010137450.1,RNY1P10,
../firstrun/newGeneCopies/OPN1MW/OPN1MW_partitions/OPN1MW_group1.fasta	../firstrun/newGeneCopies/OPN1MW/OPN1MW_partitions/OPN1MW_group1_OPN1MWOOOOPN1MW2OOOOPN1MW3.fasta	TEX28P2,CH17-128G5.1,OPN1MW3,OPN1LW,OPN1MW,TEX28,TKTL1,OPN1MW2,TEX28P1,
../firstrun/newGeneCopies/VGLL3/VGLL3_partitions/VGLL3_group1.fasta	../firstrun/newGeneCopies/VGLL3/VGLL3_partitions/VGLL3_group1_VGLL3.fasta	VGLL3,
../firstrun/newGeneCopies/VGLL3/VGLL3_partitions/VGLL3_group3.fasta	../firstrun/newGeneCopies/VGLL3/VGLL3_partitions/VGLL3_group3_VGLL3.fasta	VGLL3,
../firstrun/newGeneCopies/VGLL3/VGLL3_partitions/VGLL3_group2.fasta	../firstrun/newGeneCopies/VGLL3/VGLL3_partitions/VGLL3_group2_VGLL3.fasta	VGLL3,
../firstrun/newGeneCopies/ZNF571/ZNF571_partitions/ZNF571_group6.fasta	../firstrun/newGeneCopies/ZNF571/ZNF571_partitions/ZNF571_group6_ZNF571OOOZNF571-AS1OOOCTD-3064H18v4.fasta	ZNF571-AS1,ZNF793,ZNF571,CTD-3064H18.4,ZNF540,
../firstrun/newGeneCopies/ADRM1/ADRM1_partitions/ADRM1_group1.fasta	../firstrun/newGeneCopies/ADRM1/ADRM1_partitions/ADRM1_group1_ADRM1OOOLAMA5OOORP11-157P1v4.fasta	LAMA5,ADRM1,RP11-157P1.4,
../firstrun/newGeneCopies/HLA-C/HLA-C_partitions/HLA-C_group8.fasta	../firstrun/newGeneCopies/HLA-C/HLA-C_partitions/HLA-C_group8_HLA-COOOHLA-BOOOMIR6891.fasta	HLA-C,HLA-B,XXbac-BPG248L24.12,MIR6891,USP8P1,
../firstrun/newGeneCopies/UNC93B1/UNC93B1_partitions/UNC93B1_group1.fasta	../firstrun/newGeneCopies/UNC93B1/UNC93B1_partitions/UNC93B1_group1_UNC93B1OOOKRTAP5-11OOORP11-413E6v11.fasta	UNC93B8,UNC93B6,RP11-413E6.11,UNC93B5,UNC93B3,UNC93B2,UNC93B1,UNC93B7,KRTAP5-11,UNC93B4,RPL23AP49,
../firstrun/newGeneCopies/SPDYE17/SPDYE17_partitions/SPDYE17_group1.fasta	../firstrun/newGeneCopies/SPDYE17/SPDYE17_partitions/SPDYE17_group1_SPDYE17OOOAC004951v6OOOAC004980v9.fasta	SPDYE6,CH17-264B6.6,SPDYE14,RBAK-RBAKDN,POLR2J4,RP11-467H10.2,SPDYE3,PMS2P6,SPDYE16,POLR2J3,SPDYE12P,AC004951.6,CH17-264B6.3,DTX2P1-UPK3BP1-PMS2P11,CH17-264B6.1,SPDYE10P,SPDYE9,SPDYE13,PMS2P4,SPDYE15P,SPDYE2B,SPDYE20P,SPDYE15,SPDYE19P,SPDYE1,RP11-577H5.5,SPDYE14P,PMS2P10,POLR2J2,SPDYE11,PMS2P1,SPDYE21,RP5-1022I14.2,SPDYE5,SPDYE17,SPDYE18,RP11-514P8.10,PMS2P2,AC004980.9,SPDYE7P,PMS2CL,RNF216P1,SPDYE8,PMS2P7,RP5-1165K10.2,RP11-514P8.7,SPDYE2,SPDYE13P,PMS2P8,
../firstrun/newGeneCopies/KLK4/KLK4_partitions/KLK4_group1.fasta	../firstrun/newGeneCopies/KLK4/KLK4_partitions/KLK4_group1_KLK4.fasta	KLK4,
../firstrun/newGeneCopies/USP19/USP19_partitions/USP19_group1.fasta	../firstrun/newGeneCopies/USP19/USP19_partitions/USP19_group1_USP19OOOLAMB2OOOQARS1.fasta	LAMB2,QARS1,USP19,
../firstrun/newGeneCopies/VCY/VCY_partitions/VCY_group1.fasta	../firstrun/newGeneCopies/VCY/VCY_partitions/VCY_group1_VCYOOOVCY1B.fasta	VCY1B,VCY,
../firstrun/newGeneCopies/LCN8/LCN8_partitions/LCN8_group1.fasta	../firstrun/newGeneCopies/LCN8/LCN8_partitions/LCN8_group1_LCN8OOOLCN15.fasta	LCN8,LCN15,
../firstrun/newGeneCopies/GSC2/GSC2_partitions/GSC2_group1.fasta	../firstrun/newGeneCopies/GSC2/GSC2_partitions/GSC2_group1_GSC2OOOESS2.fasta	ESS2,GSC2,
../firstrun/newGeneCopies/CYP4F3/CYP4F3_partitions/CYP4F3_group1.fasta	../firstrun/newGeneCopies/CYP4F3/CYP4F3_partitions/CYP4F3_group1_CYP4F3OOOCYP4F10POOOCYP4F2.fasta	CYP4F10P,CYP4F3,CYP4F2,
../firstrun/newGeneCopies/ZNF697/ZNF697_partitions/ZNF697_group2.fasta	../firstrun/newGeneCopies/ZNF697/ZNF697_partitions/ZNF697_group2_ZNF697.fasta	ZNF697,
../firstrun/newGeneCopies/ZNF697/ZNF697_partitions/ZNF697_group3.fasta	../firstrun/newGeneCopies/ZNF697/ZNF697_partitions/ZNF697_group3_ZNF697OOOPHGDH.fasta	ZNF697,PHGDH,
../firstrun/newGeneCopies/SGCB/SGCB_partitions/SGCB_group1.fasta	../firstrun/newGeneCopies/SGCB/SGCB_partitions/SGCB_group1_SGCBOOOLRRC66.fasta	SGCB,LRRC66,
../firstrun/newGeneCopies/C4/C4_partitions/C4_group5.fasta	../firstrun/newGeneCopies/C4/C4_partitions/C4_group5_C4AOOOC4A-AS1OOOC4B.fasta	XXbac-BPG116M5.15,DXO,C4B-AS1,DAQB-331I12.15,STK19,C4A,C4B_2,CYP21A2,ENSG00000269167,CYP21A1P,C4A-AS1,C4B,TNXA,STK19B,TNXB,
../firstrun/newGeneCopies/ZNF835/ZNF835_partitions/ZNF835_group1.fasta	../firstrun/newGeneCopies/ZNF835/ZNF835_partitions/ZNF835_group1_ZNF835OOOAC006115v1OOOAC006115v7.fasta	AC006115.7,AC007228.1,ZNF835,ZIM2-AS1,AC006115.1,
../firstrun/newGeneCopies/TUBA3/TUBA3_partitions/TUBA3_group1.fasta	../firstrun/newGeneCopies/TUBA3/TUBA3_partitions/TUBA3_group1_TUBA3COOOTUBA3DOOOTUBA3E.fasta	MZT2A,TUBA3C,TUBA3D,MZT2B,SMPD4P2,RP11-408E5.8,RP11-408E5.4,TUBA3E,
../firstrun/newGeneCopies/LY6G/LY6G_partitions/LY6G_group1.fasta	../firstrun/newGeneCopies/LY6G/LY6G_partitions/LY6G_group1_LY6G5BOOOLY6G5COOOABHD16A.fasta	CSNK2B,ENSG00000258543,ENSG00000258589,XXbac-BPG32J3.22,ABHD16A,LY6G5B,GPANK1,LY6G5C,XXbac-BPG32J3.20,
../firstrun/newGeneCopies/LY6G/LY6G_partitions/LY6G_group2.fasta	../firstrun/newGeneCopies/LY6G/LY6G_partitions/LY6G_group2_LY6G6COOOLY6G6DOOOLY6G6E.fasta	MPIG6B,LY6G6F,LY6G6D,LY6G6F-LY6G6D,LY6G6C,LY6G6E,XXbac-BPG32J3.20,
../firstrun/newGeneCopies/RASA4/RASA4_partitions/RASA4_group7.fasta	../firstrun/newGeneCopies/RASA4/RASA4_partitions/RASA4_group7_RASA4OOORASA4BOOORASA4CP.fasta	RASA4DP,RP11-514P8.7,POLR2J4,DBNL,AC004985.12,AC093668.2,RP11-467H10.2,RP5-1022I14.2,POLR2J2,RASA4B,RP5-1165K10.2,RP11-577H5.5,RP11-514P8.10,RASA4CP,RP11-514P8.6,CCDC146,RASA4,LINC00957,POLR2J,POLR2J3,
../firstrun/newGeneCopies/LTA/LTA_partitions/LTA_group1.fasta	../firstrun/newGeneCopies/LTA/LTA_partitions/LTA_group1_LTAOOOLTBOOOTNF.fasta	LTB,TNF,LTA,
../firstrun/newGeneCopies/STAB1/STAB1_partitions/STAB1_group1.fasta	../firstrun/newGeneCopies/STAB1/STAB1_partitions/STAB1_group1_STAB1OOONISCHOOONT5DC2.fasta	NT5DC2,STAB1,NISCH,
../firstrun/newGeneCopies/DDX39/DDX39_partitions/DDX39_group5.fasta	../firstrun/newGeneCopies/DDX39/DDX39_partitions/DDX39_group5_ATP6V1G2-DDX39BOOODDX39BOOODDX39B-AS1.fasta	SNORD84,DASS-161H22.6,MCCD1,DDX39B-AS1,NFKBIL1,ATP6V1G2-DDX39B,SNORD117,ATP6V1G2,RPL15P4,DDX39B,
../firstrun/newGeneCopies/VPS35/VPS35_partitions/VPS35_group6.fasta	../firstrun/newGeneCopies/VPS35/VPS35_partitions/VPS35_group6_VPS35OOOVPS35P1OOOORC6.fasta	RP11-93O14.3,VPS35P1,VPS35,ORC6,RP11-93O14.2,
../firstrun/newGeneCopies/PSMD8/PSMD8_partitions/PSMD8_group2.fasta	../firstrun/newGeneCopies/PSMD8/PSMD8_partitions/PSMD8_group2_PSMD8OOOAC005789v9OOOCATSPERG.fasta	CATSPERG,GGN,AC005789.9,PSMD8,
../firstrun/newGeneCopies/TUBA8/TUBA8_partitions/TUBA8_group8.fasta	../firstrun/newGeneCopies/TUBA8/TUBA8_partitions/TUBA8_group8_TUBA8OOOAC008079v10OOOAC008079v12.fasta	AC008079.10,TUBA8,AC008079.12,USP18,
../firstrun/newGeneCopies/FBXO48/FBXO48_partitions/FBXO48_group1.fasta	../firstrun/newGeneCopies/FBXO48/FBXO48_partitions/FBXO48_group1_FBXO48OOOAPLF.fasta	APLF,FBXO48,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group18.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group18_TBC1D5OOORNU7-10P.fasta	TBC1D5,RNU7-10P,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group9.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group9_TBC1D5.fasta	TBC1D5,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group14.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group14_TBC1D5.fasta	TBC1D5,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group8.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group8_TBC1D5OOORP11-322M13v1.fasta	RP11-322M13.1,TBC1D5,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group19.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group19_TBC1D5OOOAC104297v1OOOAC104451v2.fasta	RP11-320G10.1,AC104297.1,RP11-158G18.1,PDCL3P3,SATB1-AS1,TBC1D5,AC132807.1,RP11-632N2.1,AC104451.2,SATB1,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group15.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group15_TBC1D5.fasta	TBC1D5,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group16.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group16_TBC1D5.fasta	TBC1D5,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group10.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group10_TBC1D5.fasta	TBC1D5,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group11.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group11_TBC1D5.fasta	TBC1D5,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group12.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group12_TBC1D5.fasta	TBC1D5,
../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group13.fasta	../firstrun/newGeneCopies/TBC1D5/TBC1D5_partitions/TBC1D5_group13_TBC1D5.fasta	TBC1D5,
../firstrun/newGeneCopies/KCNK15/KCNK15_partitions/KCNK15_group2.fasta	../firstrun/newGeneCopies/KCNK15/KCNK15_partitions/KCNK15_group2_KCNK15OOOKCNK15-AS1OOOCCN5.fasta	CCN5,KCNK15,KCNK15-AS1,RP4-781B1.5,RIMS4,
../firstrun/newGeneCopies/CERS6/CERS6_partitions/CERS6_group5.fasta	../firstrun/newGeneCopies/CERS6/CERS6_partitions/CERS6_group5_CERS6OOOMIR4774OOORN7SL813P.fasta	RN7SL813P,MIR4774,RNU6-766P,CERS6,
../firstrun/newGeneCopies/CERS6/CERS6_partitions/CERS6_group8.fasta	../firstrun/newGeneCopies/CERS6/CERS6_partitions/CERS6_group8_CERS6OOOCERS6-AS1OOONOSTRIN.fasta	CERS6,NOSTRIN,CERS6-AS1,
../firstrun/newGeneCopies/A4GALT/A4GALT_partitions/A4GALT_group1.fasta	../firstrun/newGeneCopies/A4GALT/A4GALT_partitions/A4GALT_group1_A4GALT.fasta	A4GALT,
../firstrun/newGeneCopies/A4GALT/A4GALT_partitions/A4GALT_group2.fasta	../firstrun/newGeneCopies/A4GALT/A4GALT_partitions/A4GALT_group2_A4GALT.fasta	A4GALT,
../firstrun/newGeneCopies/RYR1/RYR1_partitions/RYR1_group1.fasta	../firstrun/newGeneCopies/RYR1/RYR1_partitions/RYR1_group1_RYR1OOOAC067969v1OOOAC067969v2.fasta	AC067969.1,MAP4K1,AC067969.2,RYR1,
../firstrun/newGeneCopies/WASH6P/WASH6P_partitions/WASH6P_group1.fasta	../firstrun/newGeneCopies/WASH6P/WASH6P_partitions/WASH6P_group1_WASH6POOOAJ271736v10OOODDX11L1.fasta	MIR6859-4,DDX11L16,DDX11L9,DDX11L17,WASH2P,MIR6859-1,WASH3P,MIR6859-2,WASH9P,DDX11L8,ENSG00000288284,Z84812.4,WASH8P,WASH4P,MIR6859-3,DDX11L5,DDX11L2,WASHC1,WASIR1,WASH6P,WASH7P,AJ271736.10,WASIR2,ENSG00000288336,DDX11L1,DDX11L10,
../firstrun/newGeneCopies/ZNF680/ZNF680_partitions/ZNF680_group2.fasta	../firstrun/newGeneCopies/ZNF680/ZNF680_partitions/ZNF680_group2_ZNF680OOOBNIP3P42OOORP11-561N12v6.fasta	RP11-561N12.6,ZNF680,BNIP3P42,
../firstrun/newGeneCopies/CSAG/CSAG_partitions/CSAG_group1.fasta	../firstrun/newGeneCopies/CSAG/CSAG_partitions/CSAG_group1_CSAG1OOOCSAG2OOOCSAG3.fasta	RP1-14D6.13,MAGEA12,MAGEA2B,MAGEA6-DT,CSAG3,CSAG4,MAGEA2,RP1-14D6.7,MAGEA6,CSAG1,CSAG2,MAGEA3,
../firstrun/newGeneCopies/RP11-98L5.5/RP11-98L5.5_partitions/RP11-98L5.5_group1.fasta	../firstrun/newGeneCopies/RP11-98L5.5/RP11-98L5.5_partitions/RP11-98L5.5_group1_RP11-98L5v5.fasta	RP11-98L5.5,
../firstrun/newGeneCopies/CLEC18/CLEC18_partitions/CLEC18_group1.fasta	../firstrun/newGeneCopies/CLEC18/CLEC18_partitions/CLEC18_group1_CLEC18AOOOCLEC18BOOOCLEC18C.fasta	CLEC18B,CLEC18C,RP11-252A24.5,RP11-296I10.3,CLEC18A,
../firstrun/newGeneCopies/HES5/HES5_partitions/HES5_group1.fasta	../firstrun/newGeneCopies/HES5/HES5_partitions/HES5_group1_HES5OOOPANK4OOORP3-395M20v12.fasta	PANK4,RP3-395M20.12,HES5,
../firstrun/newGeneCopies/NDN/NDN_partitions/NDN_group4.fasta	../firstrun/newGeneCopies/NDN/NDN_partitions/NDN_group4_NDN.fasta	NDN,
../firstrun/newGeneCopies/TPPP3/TPPP3_partitions/TPPP3_group1.fasta	../firstrun/newGeneCopies/TPPP3/TPPP3_partitions/TPPP3_group1_TPPP3OOOLRRC36OOORNU1-123P.fasta	ZDHHC1,LRRC36,TPPP3,RNU1-123P,
../firstrun/newGeneCopies/RP5-966M1.6/RP5-966M1.6_partitions/RP5-966M1.6_group1.fasta	../firstrun/newGeneCopies/RP5-966M1.6/RP5-966M1.6_partitions/RP5-966M1.6_group1_RP5-966M1v6OOOITIH4OOOITIH4-AS1.fasta	ITIH4,ITIH4-AS1,STIMATE-MUSTN1,RP5-966M1.6,MUSTN1,STIMATE,
../firstrun/newGeneCopies/MLPH/MLPH_partitions/MLPH_group1.fasta	../firstrun/newGeneCopies/MLPH/MLPH_partitions/MLPH_group1_MLPHOOOMIR6811.fasta	MIR6811,MLPH,
../firstrun/newGeneCopies/PMS2/PMS2_partitions/PMS2_group2.fasta	../firstrun/newGeneCopies/PMS2/PMS2_partitions/PMS2_group2_DTX2P1-UPK3BP1-PMS2P11OOOPMS2OOOPMS2CL.fasta	RP11-467H10.2,SPDYE17,POLR2J3,UPK3B,PMS2P3,AC004980.10,PMS2P12,RP11-577H5.5,SPDYE14P,SPDYE2,RNF216P1,POM121C,CTA-313A17.2,Y_RNA,POLR2J2,PMS2P9,RBAK-RBAKDN,SPDYE18,STAG3L1,SPDYE2B,AC004980.7,SPDYE20P,POLR2J4,STAG3L5P-PVRIG2P-PILRB,SPDYE8,CH17-264B6.1,RP11-163E9.2,SPDYE1,CH17-264B6.6,DTX2P1-UPK3BP1-PMS2P11,SPDYE13,AC006014.7,PMS2P2,RP11-514P8.10,AC004980.8,RP5-1022I14.2,SPDYE6,PMS2P5,ZNF12,RSPH10B,SPDYE21,RSPH10B2,PMS2P1,SPDYE5,SPDYE9,SPDYE11,PMS2,RP11-514P8.7,SPDYE15,POM121,SPDYE16,RBAK,AC004980.9,SPDYE13P,RP5-1165K10.2,STAG3L5P,SPDYE3,PMS2P10,PMS2P4,SPDYE10P,RP11-163E9.1,PMS2P6,SPDYE19P,PMS2CL,SPDYE22P,PRR11,SPDYE14,SPDYE12P,AIMP2,STAG3L4,PMS2P8,PMS2P7,SPDYE7P,CH17-264B6.3,SPDYE15P,AC004951.6,PMS2P11,PRKRIP1,STAG3L2,STAG3L3,AC073343.13,
../firstrun/newGeneCopies/EIF3C/EIF3C_partitions/EIF3C_group94.fasta	../firstrun/newGeneCopies/EIF3C/EIF3C_partitions/EIF3C_group94_EIF3COOOEIF3CLOOOCDC37P1.fasta	RP11-1348G14.4,EIF3CL,MIR6862-1,RP11-231C14.10,MIR6862-2,CDC37P1,CDC37P2,EIF3C,RP11-57A19.4,
../firstrun/newGeneCopies/HLA-B/HLA-B_partitions/HLA-B_group10.fasta	../firstrun/newGeneCopies/HLA-B/HLA-B_partitions/HLA-B_group10_HLA-BOOODHFRP2OOOHLA-C.fasta	DHFRP2,XXbac-BPG248L24.10,WASF5P,HLA-B,XXbac-BPG248L24.14,XXbac-BPG248L24.12,LINC02571,MIR6891,RPL3P2,HLA-C,USP8P1,
../firstrun/newGeneCopies/ECM1/ECM1_partitions/ECM1_group1.fasta	../firstrun/newGeneCopies/ECM1/ECM1_partitions/ECM1_group1_ECM1OOOFALECOOOTARS2.fasta	ECM1,FALEC,TARS2,
../firstrun/newGeneCopies/CXorf49/CXorf49_partitions/CXorf49_group1.fasta	../firstrun/newGeneCopies/CXorf49/CXorf49_partitions/CXorf49_group1_CXorf49OOOCXorf49BOOOAL590763v16.fasta	RP11-402P6.13,CXorf49,CXorf49B,AL590763.16,RP11-402P6.12,RP11-402P6.9,RP11-402P6.15,
../firstrun/newGeneCopies/SSR4/SSR4_partitions/SSR4_group3.fasta	../firstrun/newGeneCopies/SSR4/SSR4_partitions/SSR4_group3_SSR4OOOIDH3GOOOPDZD4.fasta	IDH3G,SSR4,PDZD4,
../firstrun/newGeneCopies/PXT1/PXT1_partitions/PXT1_group2.fasta	../firstrun/newGeneCopies/PXT1/PXT1_partitions/PXT1_group2_PXT1OOOKCTD20.fasta	PXT1,KCTD20,
../firstrun/newGeneCopies/PXT1/PXT1_partitions/PXT1_group1.fasta	../firstrun/newGeneCopies/PXT1/PXT1_partitions/PXT1_group1_PXT1OOOETV7OOOETV7-AS1.fasta	PXT1,ETV7,ETV7-AS1,
../firstrun/newGeneCopies/ZNF568/ZNF568_partitions/ZNF568_group1.fasta	../firstrun/newGeneCopies/ZNF568/ZNF568_partitions/ZNF568_group1_ZNF568OOOZNF829.fasta	ZNF829,ZNF568,
../firstrun/newGeneCopies/CHRNA7/CHRNA7_partitions/CHRNA7_group1.fasta	../firstrun/newGeneCopies/CHRNA7/CHRNA7_partitions/CHRNA7_group1_CHRNA7OOOCHRFAM7AOOOENSG00000274542.fasta	RP11-624A21.1,Y_RNA,ENSG00000282088,CHRNA7,ENSG00000274542,CHRFAM7A,
../firstrun/newGeneCopies/CHRNA7/CHRNA7_partitions/CHRNA7_group3.fasta	../firstrun/newGeneCopies/CHRNA7/CHRNA7_partitions/CHRNA7_group3_CHRNA7OOOENSG10010138017v1OOOENSG10010140130v1.fasta	ENSG10010140130.1,ENSG10010138017.1,CHRNA7,
../firstrun/newGeneCopies/VKORC1/VKORC1_partitions/VKORC1_group7.fasta	../firstrun/newGeneCopies/VKORC1/VKORC1_partitions/VKORC1_group7_VKORC1OOOPRSS53OOORP11-196G11v1.fasta	RP11-196G11.1,VKORC1,PRSS53,RP11-196G11.3,
../firstrun/newGeneCopies/PLAGL/PLAGL_partitions/PLAGL_group4.fasta	../firstrun/newGeneCopies/PLAGL/PLAGL_partitions/PLAGL_group4_PLAGL1OOORP3-340H11v2.fasta	PLAGL1,RP3-340H11.2,
../firstrun/newGeneCopies/PLAGL/PLAGL_partitions/PLAGL_group3.fasta	../firstrun/newGeneCopies/PLAGL/PLAGL_partitions/PLAGL_group3_PLAGL1OOOENSG10010134178v1OOOHYMAI.fasta	PLAGL1,ENSG10010134178.1,HYMAI,
../firstrun/newGeneCopies/PLAGL/PLAGL_partitions/PLAGL_group2.fasta	../firstrun/newGeneCopies/PLAGL/PLAGL_partitions/PLAGL_group2_PLAGL1OOORP3-468K18v7OOOZC2HC1B.fasta	RP3-468K18.7,PLAGL1,ZC2HC1B,
../firstrun/newGeneCopies/IGSF6/IGSF6_partitions/IGSF6_group1.fasta	../firstrun/newGeneCopies/IGSF6/IGSF6_partitions/IGSF6_group1_IGSF6OOOMETTL9OOORNU6-1005P.fasta	METTL9,RNU6-1005P,RNU6-196P,IGSF6,
../firstrun/newGeneCopies/SH2B/SH2B_partitions/SH2B_group3.fasta	../firstrun/newGeneCopies/SH2B/SH2B_partitions/SH2B_group3_SH2B1OOOMIR4721OOORP11-22P6v2.fasta	SH2B1,RP11-231C14.10,MIR4721,RP11-22P6.2,TUFM,
../firstrun/newGeneCopies/SH2B/SH2B_partitions/SH2B_group2.fasta	../firstrun/newGeneCopies/SH2B/SH2B_partitions/SH2B_group2_SH2B3OOOATXN2OOOLINC02356.fasta	LINC02356,ATXN2,SH2B3,
../firstrun/newGeneCopies/SYNGR2/SYNGR2_partitions/SYNGR2_group3.fasta	../firstrun/newGeneCopies/SYNGR2/SYNGR2_partitions/SYNGR2_group3_SYNGR2OOOC17orf99OOOTK1.fasta	SYNGR2,TK1,C17orf99,
../firstrun/newGeneCopies/ADGRE1/ADGRE1_partitions/ADGRE1_group1.fasta	../firstrun/newGeneCopies/ADGRE1/ADGRE1_partitions/ADGRE1_group1_ADGRE1OOOCTC-312O10v2OOOCTC-312O10v3.fasta	ADGRE1,CTC-312O10.3,Metazoa_SRP,CTC-312O10.2,
../firstrun/newGeneCopies/PARP/PARP_partitions/PARP_group15.fasta	../firstrun/newGeneCopies/PARP/PARP_partitions/PARP_group15_PARP8.fasta	PARP8,
../firstrun/newGeneCopies/PARP/PARP_partitions/PARP_group1.fasta	../firstrun/newGeneCopies/PARP/PARP_partitions/PARP_group1_PARP8OOOCH17-118O6v6OOOCH17-159N18v3.fasta	CH17-472G23.1,WI2-1896O14.1,CH17-159N18.3,PARP8,CH17-172B3.1,LINC00869,LINC00623,CH17-118O6.6,CH17-195P21.2,CH17-172B3.2,LINC01145,CH17-189H20.1,LINC01138,RP11-353N4.6,RP11-269M20.3,CH17-472G23.2,RP11-495P10.10,
../firstrun/newGeneCopies/FAM200/FAM200_partitions/FAM200_group1.fasta	../firstrun/newGeneCopies/FAM200/FAM200_partitions/FAM200_group1_FAM200BOOOFBXL5OOORP11-115L11v3.fasta	RP11-115L11.3,FAM200B,FBXL5,
