Bayesian Hidden Markov Model for the detection of differentially methylated regions


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Documentation for package ‘hummingbird’ version 1.0.0

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hummingbird-package A Bayesian Hidden Markov Model for the detection of differentially methylated regions
exampleHummingbird Sample dataset
hummingbird A Bayesian Hidden Markov Model for the detection of differentially methylated regions
hummingbirdEM EM Algorithm for Fitting the Hidden Markov Model
hummingbirdGraph Observations and Predictions Graphs
hummingbirdPostAdjustment Post Adjustment algorithm for the output of the EM